FFCP PHASE1:Hg19::chr8:125740699..125740720,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125740699..125740720,-
|short_description=p2@MTSS1
|description=CAGE_peak_2_at_MTSS1_5end
|association_with_transcript=9bp_to_ENST00000354184,NM_014751,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9788 | |EntrezGene=9788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |HGNC=20443 | ||
|TSSclassifier=strong | |||
|UniProt=O43312 | |UniProt=O43312 | ||
|association_with_transcript=9bp_to_ENST00000354184,NM_014751,uc003yrj.2,uc003yrk.2,uc003yrl.2_5end | |||
|cluster_id=chr8:125740699..125740720,- | |||
|coexpression_cluster_id=C2008 | |||
|description=CAGE_peak_2_at_MTSS1_5end | |||
|id=chr8:125740699..125740720,- | |||
|ontology_enrichment_celltype=CL:0002057!2.64e-17!42;CL:0000860!4.75e-14!45;CL:0000557!5.29e-13!71;CL:0000839!3.68e-12!70;CL:0000766!4.45e-12!76;CL:0002009!9.59e-12!65;CL:0002194!9.68e-11!63;CL:0000576!9.68e-11!63;CL:0000040!9.68e-11!63;CL:0000559!9.68e-11!63;CL:0000738!1.76e-10!140;CL:0000763!4.98e-09!112;CL:0000049!4.98e-09!112;CL:0002031!7.23e-09!124;CL:0002087!6.78e-08!119;CL:0002393!2.78e-07!9;CL:0002397!2.78e-07!9;CL:0002032!3.55e-07!165;CL:0000837!3.55e-07!165;CL:0000037!4.45e-07!172;CL:0000566!4.45e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-11;33!CL:0002057;1.39e-11;33!CL:0000576;1.48e-11;48!CL:0000473;7.08e-10;39!CL:0000234;7.08e-10;39!CL:0000766;7.20e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.35e-18,48;CL:0000234,3.35e-18,48;CL:0000860,3.53e-18,42;CL:0002057,3.53e-18,42;CL:0000557,1.88e-17,67;CL:0000766,4.26e-16,72;CL:0000839,5.58e-16,66;CL:0002009,6.55e-16,61;CL:0000738,3.84e-15,136;CL:0002194,1.02e-14,59;CL:0000576,1.02e-14,59;CL:0000040,1.02e-14,59;CL:0000559,1.02e-14,59;CL:0000763,6.36e-13,108;CL:0000049,6.36e-13,108;CL:0002031,6.49e-13,120;CL:0002087,6.52e-12,115;CL:0002032,1.88e-11,161;CL:0000837,1.88e-11,161;CL:0000037,1.95e-11,168;CL:0000988,4.23e-10,177;CL:0002393,1.34e-07,9;CL:0002397,1.34e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-16!115;UBERON:0002390!6.41e-14!102;UBERON:0003061!6.41e-14!102;UBERON:0002193!2.19e-13!112;UBERON:0002405!2.43e-11!115;UBERON:0002371!4.46e-11!80;UBERON:0001049!4.35e-10!57;UBERON:0005068!4.35e-10!57;UBERON:0006241!4.35e-10!57;UBERON:0007135!4.35e-10!57;UBERON:0001474!6.12e-10!86;UBERON:0000922!4.87e-09!612;UBERON:0002050!5.80e-09!605;UBERON:0005423!5.80e-09!605;UBERON:0000923!6.43e-09!604;UBERON:0005291!6.43e-09!604;UBERON:0006598!6.43e-09!604;UBERON:0002532!6.43e-09!604;UBERON:0003080!1.60e-08!42;UBERON:0005743!1.96e-08!86;UBERON:0002780!2.21e-08!41;UBERON:0001890!2.21e-08!41;UBERON:0006240!2.21e-08!41;UBERON:0001017!3.02e-08!82;UBERON:0000467!7.35e-08!625;UBERON:0000073!8.81e-08!94;UBERON:0001016!8.81e-08!94;UBERON:0000480!1.08e-07!626;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101;UBERON:0002616!1.57e-07!59;UBERON:0001893!5.96e-07!34;UBERON:0000955!6.41e-07!69;UBERON:0006238!6.41e-07!69;UBERON:0000479!8.31e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.33e-07;41!UBERON:0001890;9.33e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.43e-18,98;UBERON:0003061,4.43e-18,98;UBERON:0002193,8.60e-17,108;UBERON:0007023,2.17e-16,114;UBERON:0002371,8.85e-15,76;UBERON:0002405,1.14e-13,93;UBERON:0001474,2.03e-13,82;UBERON:0004765,2.65e-11,90;UBERON:0001049,3.73e-10,56;UBERON:0005068,3.73e-10,56;UBERON:0006241,3.73e-10,56;UBERON:0007135,3.73e-10,56;UBERON:0005423,6.08e-10,581;UBERON:0000073,1.55e-09,53;UBERON:0002616,1.55e-09,53;UBERON:0001434,5.10e-09,100;UBERON:0000922,5.37e-09,592;UBERON:0002050,6.31e-09,564;UBERON:0002780,8.91e-09,41;UBERON:0001890,8.91e-09,41;UBERON:0003080,8.91e-09,41;UBERON:0006240,8.91e-09,41;UBERON:0000923,1.56e-08,560;UBERON:0010316,1.56e-08,560;UBERON:0005291,1.56e-08,560;UBERON:0006598,1.56e-08,560;UBERON:0010317,1.56e-08,560;UBERON:0002532,1.56e-08,560;UBERON:0000479,3.51e-08,773;UBERON:0001017,7.13e-08,81;UBERON:0001016,2.54e-07,89;UBERON:0001893,2.88e-07,34;UBERON:0003528,6.57e-07,34;UBERON:0002020,6.57e-07,34 | |||
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| ||
|short_description=p2@MTSS1 | |||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p2@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTSS1_5end |
Coexpression cluster: | C2008_immature_migratory_CD14CD16_CD14_leukemia_mesothelioma_temporal |
Association with transcript: | 9bp_to_ENST00000354184, NM_014751, uc003yrj.2, uc003yrk.2, uc003yrl.2_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | O43312 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.35e-18 | 48 |
phagocyte | 3.35e-18 | 48 |
classical monocyte | 3.53e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-18 | 42 |
granulocyte monocyte progenitor cell | 1.88e-17 | 67 |
myeloid leukocyte | 4.26e-16 | 72 |
myeloid lineage restricted progenitor cell | 5.58e-16 | 66 |
macrophage dendritic cell progenitor | 6.55e-16 | 61 |
leukocyte | 3.84e-15 | 136 |
monopoietic cell | 1.02e-14 | 59 |
monocyte | 1.02e-14 | 59 |
monoblast | 1.02e-14 | 59 |
promonocyte | 1.02e-14 | 59 |
myeloid cell | 6.36e-13 | 108 |
common myeloid progenitor | 6.36e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 6.49e-13 | 120 |
nongranular leukocyte | 6.52e-12 | 115 |
hematopoietic oligopotent progenitor cell | 1.88e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-11 | 161 |
hematopoietic stem cell | 1.95e-11 | 168 |
hematopoietic cell | 4.23e-10 | 177 |
intermediate monocyte | 1.34e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.34e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.43e-18 | 98 |
blood island | 4.43e-18 | 98 |
hemolymphoid system | 8.60e-17 | 108 |
adult organism | 2.17e-16 | 114 |
bone marrow | 8.85e-15 | 76 |
immune system | 1.14e-13 | 93 |
bone element | 2.03e-13 | 82 |
skeletal element | 2.65e-11 | 90 |
neural tube | 3.73e-10 | 56 |
neural rod | 3.73e-10 | 56 |
future spinal cord | 3.73e-10 | 56 |
neural keel | 3.73e-10 | 56 |
developing anatomical structure | 6.08e-10 | 581 |
regional part of nervous system | 1.55e-09 | 53 |
regional part of brain | 1.55e-09 | 53 |
skeletal system | 5.10e-09 | 100 |
embryo | 5.37e-09 | 592 |
embryonic structure | 6.31e-09 | 564 |
regional part of forebrain | 8.91e-09 | 41 |
forebrain | 8.91e-09 | 41 |
anterior neural tube | 8.91e-09 | 41 |
future forebrain | 8.91e-09 | 41 |
germ layer | 1.56e-08 | 560 |
germ layer / neural crest | 1.56e-08 | 560 |
embryonic tissue | 1.56e-08 | 560 |
presumptive structure | 1.56e-08 | 560 |
germ layer / neural crest derived structure | 1.56e-08 | 560 |
epiblast (generic) | 1.56e-08 | 560 |
tissue | 3.51e-08 | 773 |
central nervous system | 7.13e-08 | 81 |
nervous system | 2.54e-07 | 89 |
telencephalon | 2.88e-07 | 34 |
brain grey matter | 6.57e-07 | 34 |
gray matter | 6.57e-07 | 34 |