FFCP PHASE1:Hg19::chr16:3071571..3071641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:3071571..3071641,+ | |||
|coexpression_cluster_id=C1761 | |||
|description=CAGE_peak_at_chr16:3071571..3071641,+ | |||
|id=chr16:3071571..3071641,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.60e-26!679;CL:0000004!1.60e-26!679;CL:0000255!1.60e-26!679;CL:0000220!2.01e-26!246;CL:0002321!3.81e-26!248;CL:0000012!2.59e-25!682;CL:0000066!2.91e-25!254;CL:0000055!2.24e-19!180;CL:0000144!4.37e-17!625;CL:0000222!4.75e-16!119;CL:0002371!1.63e-13!591;CL:0000003!3.10e-13!722;CL:0000057!9.05e-11!75;CL:0000063!3.16e-10!578;CL:0000192!4.39e-10!42;CL:0000514!4.39e-10!42;CL:0000183!6.57e-10!59;CL:0000680!1.28e-09!57;CL:0000056!1.28e-09!57;CL:0000355!1.28e-09!57;CL:0000393!2.23e-09!60;CL:0000211!2.23e-09!60;CL:0000359!2.40e-09!32;CL:0000187!8.94e-09!54;CL:0000076!1.08e-07!62;CL:0000077!7.21e-07!19;CL:0002076!9.68e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.62e-09;32!CL:0000349;7.71e-08;19!CL:0000192;1.15e-07;43!CL:1000449;2.71e-07;15!CL:0000077;2.82e-07;19!CL:0000134;3.67e-07;55!CL:1000497;7.05e-07;17!CL:0002518;7.05e-07;17!CL:0002368;7.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.50e-26,250;CL:0000066,6.89e-24,253;CL:0000222,1.62e-16,121;CL:0000057,3.07e-11,76;CL:0000192,2.05e-10,43;CL:0000514,2.05e-10,43;CL:0000359,1.43e-09,32;CL:0000680,3.62e-09,58;CL:0000056,3.62e-09,58;CL:0000355,3.62e-09,58;CL:0000393,4.47e-09,61;CL:0000211,4.47e-09,61;CL:0000187,2.70e-08,55;CL:0000349,1.18e-07,19;CL:0000077,2.84e-07,19;CL:0000076,3.83e-07,63;CL:1000449,3.83e-07,15;CL:0000213,6.34e-07,58;CL:0000215,6.34e-07,58;CL:0002368,7.22e-07,13;CL:1000497,7.64e-07,17;CL:0002518,7.64e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.15e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.45e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.91e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.10e-15!143;UBERON:0002100!5.76e-15!216;UBERON:0003914!6.01e-14!118;UBERON:0003104!9.07e-13!238;UBERON:0009142!9.07e-13!238;UBERON:0001637!9.52e-13!42;UBERON:0003509!9.52e-13!42;UBERON:0004572!9.52e-13!42;UBERON:0000486!2.36e-12!82;UBERON:0000468!2.77e-12!659;UBERON:0000914!9.39e-12!83;UBERON:0002329!9.39e-12!83;UBERON:0003077!9.39e-12!83;UBERON:0003059!9.39e-12!83;UBERON:0007282!9.39e-12!83;UBERON:0009618!9.39e-12!83;UBERON:0007285!9.39e-12!83;UBERON:0002049!4.95e-11!79;UBERON:0007798!4.95e-11!79;UBERON:0000490!5.48e-11!138;UBERON:0004573!7.29e-11!33;UBERON:0004571!7.29e-11!33;UBERON:0004872!7.83e-11!84;UBERON:0000467!8.64e-11!625;UBERON:0000055!9.31e-11!69;UBERON:0001981!9.68e-11!60;UBERON:0007500!9.68e-11!60;UBERON:0004537!9.68e-11!60;UBERON:0006965!9.68e-11!60;UBERON:0000480!1.56e-10!626;UBERON:0004290!1.57e-10!70;UBERON:0000926!2.69e-10!448;UBERON:0004120!2.69e-10!448;UBERON:0006603!2.69e-10!448;UBERON:0000483!2.44e-09!309;UBERON:0000119!2.58e-09!312;UBERON:0000481!3.54e-09!347;UBERON:0001134!4.90e-09!61;UBERON:0002036!4.90e-09!61;UBERON:0003082!4.90e-09!61;UBERON:0002385!1.48e-08!63;UBERON:0001015!1.48e-08!63;UBERON:0000383!1.48e-08!63;UBERON:0000475!3.31e-08!365;UBERON:0000923!4.78e-08!604;UBERON:0005291!4.78e-08!604;UBERON:0006598!4.78e-08!604;UBERON:0002532!4.78e-08!604;UBERON:0002050!5.81e-08!605;UBERON:0005423!5.81e-08!605;UBERON:0000922!7.80e-08!612;UBERON:0009569!6.41e-07!113;UBERON:0006554!7.04e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.06e-10;33!UBERON:0004571;3.06e-10;33!UBERON:0001637;6.73e-10;42!UBERON:0003509;6.73e-10;42!UBERON:0004572;6.73e-10;42!UBERON:0003914;4.90e-08;74!UBERON:0006555;2.71e-07;15!UBERON:0004819;2.71e-07;15!UBERON:0001285;2.71e-07;15!UBERON:0007684;2.71e-07;15!UBERON:0000947;7.61e-07;21!UBERON:0010191;7.61e-07;21!UBERON:0001851;8.78e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.35e-13,42;UBERON:0003509,1.35e-13,42;UBERON:0004572,1.35e-13,42;UBERON:0003914,2.32e-13,117;UBERON:0002100,3.07e-12,199;UBERON:0007503,3.72e-12,78;UBERON:0000486,9.06e-12,83;UBERON:0004573,1.43e-11,33;UBERON:0004571,1.43e-11,33;UBERON:0003104,2.18e-11,160;UBERON:0009142,2.18e-11,160;UBERON:0000490,3.04e-11,148;UBERON:0000055,4.08e-11,68;UBERON:0004872,5.04e-11,83;UBERON:0002049,5.36e-11,78;UBERON:0007798,5.36e-11,78;UBERON:0007500,6.01e-11,59;UBERON:0001981,6.01e-11,59;UBERON:0004537,6.01e-11,59;UBERON:0006965,6.01e-11,59;UBERON:0002329,4.42e-10,71;UBERON:0003059,4.42e-10,71;UBERON:0007282,4.42e-10,71;UBERON:0004290,4.42e-10,71;UBERON:0009618,4.42e-10,71;UBERON:0005256,6.68e-10,122;UBERON:0007524,9.84e-10,73;UBERON:0003077,1.22e-09,72;UBERON:0007285,1.22e-09,72;UBERON:0001134,1.65e-08,62;UBERON:0002036,1.65e-08,62;UBERON:0003082,1.65e-08,62;UBERON:0000483,2.57e-08,306;UBERON:0000119,3.59e-08,309;UBERON:0006554,5.66e-08,47;UBERON:0002385,1.10e-07,64;UBERON:0001015,1.10e-07,64;UBERON:0000383,1.10e-07,64;UBERON:0001008,1.69e-07,48;UBERON:0004923,2.20e-07,66;UBERON:0004211,3.83e-07,15;UBERON:0009773,3.83e-07,15;UBERON:0001231,3.83e-07,15;UBERON:0001285,3.83e-07,15;UBERON:0007684,3.83e-07,15;UBERON:0004208,3.83e-07,15;UBERON:0000947,5.13e-07,21;UBERON:0010191,5.13e-07,21;UBERON:0003102,5.32e-07,99 | |||
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| |||
|short_description=p@chr16:3071571..3071641,+ | |||
}} |
Latest revision as of 08:16, 25 July 2015
Short description: | p@chr16:3071571..3071641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3071571..3071641, + |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.50e-26 | 250 |
epithelial cell | 6.89e-24 | 253 |
mesodermal cell | 1.62e-16 | 121 |
fibroblast | 3.07e-11 | 76 |
smooth muscle cell | 2.05e-10 | 43 |
smooth muscle myoblast | 2.05e-10 | 43 |
vascular associated smooth muscle cell | 1.43e-09 | 32 |
muscle precursor cell | 3.62e-09 | 58 |
myoblast | 3.62e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.62e-09 | 58 |
electrically responsive cell | 4.47e-09 | 61 |
electrically active cell | 4.47e-09 | 61 |
muscle cell | 2.70e-08 | 55 |
extraembryonic cell | 1.18e-07 | 19 |
mesothelial cell | 2.84e-07 | 19 |
squamous epithelial cell | 3.83e-07 | 63 |
epithelial cell of nephron | 3.83e-07 | 15 |
lining cell | 6.34e-07 | 58 |
barrier cell | 6.34e-07 | 58 |
respiratory epithelial cell | 7.22e-07 | 13 |
kidney cell | 7.64e-07 | 17 |
kidney epithelial cell | 7.64e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.91e-07 | 14 |