FFCP PHASE1:Hg19::chr16:80838093..80838141,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23030 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N8U2 | |||
|association_with_transcript=33bp_to_ENST00000299564,NM_152342,uc002ffs.2_5end | |||
|cluster_id=chr16:80838093..80838141,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CDYL2_5end | |||
|id=chr16:80838093..80838141,- | |||
|ontology_enrichment_celltype=CL:0002139!4.27e-10!24;CL:0000860!9.21e-08!45;CL:0000071!1.04e-07!18;CL:0002546!1.04e-07!18;CL:0002057!2.09e-07!42;CL:0000115!3.48e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.42e-11;24!CL:0000071;4.22e-08;18!CL:0000115;1.79e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.11e-11,24;CL:0000115,5.85e-09,36;CL:0000071,1.08e-08,18;CL:0002546,1.08e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;4.22e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.76e-18!57;UBERON:0005068!1.76e-18!57;UBERON:0006241!1.76e-18!57;UBERON:0007135!1.76e-18!57;UBERON:0001869!1.93e-17!32;UBERON:0002616!4.09e-17!59;UBERON:0002020!5.39e-17!34;UBERON:0003528!5.39e-17!34;UBERON:0001893!1.25e-16!34;UBERON:0002780!4.79e-16!41;UBERON:0001890!4.79e-16!41;UBERON:0006240!4.79e-16!41;UBERON:0002791!5.30e-16!33;UBERON:0003080!9.36e-16!42;UBERON:0002619!1.29e-15!22;UBERON:0000955!6.05e-15!69;UBERON:0006238!6.05e-15!69;UBERON:0001950!2.29e-14!20;UBERON:0001017!1.55e-13!82;UBERON:0000956!3.61e-13!25;UBERON:0000203!3.61e-13!25;UBERON:0005743!8.42e-13!86;UBERON:0007023!2.11e-12!115;UBERON:0000073!1.17e-11!94;UBERON:0001016!1.17e-11!94;UBERON:0003075!8.21e-11!86;UBERON:0007284!8.21e-11!86;UBERON:0003056!9.78e-10!61;UBERON:0002346!1.16e-09!90;UBERON:0000025!9.82e-09!194;UBERON:0001986!1.04e-07!18;UBERON:0004638!1.04e-07!18;UBERON:0004852!1.04e-07!18;UBERON:0000033!1.61e-07!123;UBERON:0000153!2.14e-07!129;UBERON:0007811!2.14e-07!129;UBERON:0000477!6.76e-07!286;UBERON:0004111!7.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.82e-19;22!UBERON:0001869;4.69e-19;32!UBERON:0001950;7.25e-18;20!UBERON:0003528;9.07e-18;34!UBERON:0002020;9.07e-18;34!UBERON:0001893;1.19e-17;34!UBERON:0002791;1.47e-17;32!UBERON:0000956;8.40e-16;25!UBERON:0000203;8.40e-16;25!UBERON:0002780;1.84e-14;41!UBERON:0001890;1.84e-14;41!UBERON:0000073;1.72e-12;53!UBERON:0002616;1.72e-12;53!UBERON:0000955;1.03e-08;68!UBERON:0001017;1.04e-08;75!UBERON:0004638;4.22e-08;18!UBERON:0001986;4.22e-08;18!UBERON:0004852;4.22e-08;18!UBERON:0001016;2.53e-07;83!UBERON:0001871;7.12e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-22,53;UBERON:0002616,4.57e-22,53;UBERON:0001049,1.09e-21,56;UBERON:0005068,1.09e-21,56;UBERON:0006241,1.09e-21,56;UBERON:0007135,1.09e-21,56;UBERON:0001869,5.19e-21,32;UBERON:0003528,3.02e-20,34;UBERON:0002020,3.02e-20,34;UBERON:0001893,8.50e-20,34;UBERON:0002619,2.88e-19,22;UBERON:0002791,3.91e-19,32;UBERON:0002780,4.27e-19,41;UBERON:0001890,4.27e-19,41;UBERON:0003080,4.27e-19,41;UBERON:0006240,4.27e-19,41;UBERON:0001950,1.08e-17,20;UBERON:0000955,5.95e-17,68;UBERON:0006238,5.95e-17,68;UBERON:0000956,1.20e-15,25;UBERON:0000203,1.20e-15,25;UBERON:0001017,1.51e-15,81;UBERON:0001016,1.10e-14,89;UBERON:0003075,1.15e-14,82;UBERON:0007284,1.15e-14,82;UBERON:0003056,9.24e-14,61;UBERON:0002346,1.30e-13,86;UBERON:0007023,5.87e-12,114;UBERON:0010371,3.67e-11,104;UBERON:0000025,1.99e-09,192;UBERON:0004638,1.08e-08,18;UBERON:0001986,1.08e-08,18;UBERON:0004852,1.08e-08,18;UBERON:0004111,1.47e-07,240;UBERON:0001871,9.32e-07,6 | |||
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| |||
|short_description=p3@CDYL2 | |||
}} |
Latest revision as of 00:15, 18 September 2015
Short description: | p3@CDYL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDYL2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 33bp_to_ENST00000299564, NM_152342, uc002ffs.2_5end |
EntrezGene: | CDYL2 |
HGNC: | 23030 |
UniProt: | Q8N8U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.11e-11 | 24 |
endothelial cell | 5.85e-09 | 36 |
blood vessel endothelial cell | 1.08e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.08e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.57e-22 | 53 |
regional part of brain | 4.57e-22 | 53 |
neural tube | 1.09e-21 | 56 |
neural rod | 1.09e-21 | 56 |
future spinal cord | 1.09e-21 | 56 |
neural keel | 1.09e-21 | 56 |
cerebral hemisphere | 5.19e-21 | 32 |
brain grey matter | 3.02e-20 | 34 |
gray matter | 3.02e-20 | 34 |
telencephalon | 8.50e-20 | 34 |
regional part of cerebral cortex | 2.88e-19 | 22 |
regional part of telencephalon | 3.91e-19 | 32 |
regional part of forebrain | 4.27e-19 | 41 |
forebrain | 4.27e-19 | 41 |
anterior neural tube | 4.27e-19 | 41 |
future forebrain | 4.27e-19 | 41 |
neocortex | 1.08e-17 | 20 |
brain | 5.95e-17 | 68 |
future brain | 5.95e-17 | 68 |
cerebral cortex | 1.20e-15 | 25 |
pallium | 1.20e-15 | 25 |
central nervous system | 1.51e-15 | 81 |
nervous system | 1.10e-14 | 89 |
neural plate | 1.15e-14 | 82 |
presumptive neural plate | 1.15e-14 | 82 |
pre-chordal neural plate | 9.24e-14 | 61 |
neurectoderm | 1.30e-13 | 86 |
adult organism | 5.87e-12 | 114 |
ecto-epithelium | 3.67e-11 | 104 |
tube | 1.99e-09 | 192 |
blood vessel endothelium | 1.08e-08 | 18 |
endothelium | 1.08e-08 | 18 |
cardiovascular system endothelium | 1.08e-08 | 18 |
anatomical conduit | 1.47e-07 | 240 |
temporal lobe | 9.32e-07 | 6 |