FFCP PHASE1:Hg19::chr1:212002863..212002877,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28985 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-218bp_to_HQ447838_5end | |||
|cluster_id=chr1:212002863..212002877,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_17_at_LPGAT1_5end | |||
|id=chr1:212002863..212002877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;8.34e-34;1!CL:0000557;8.34e-34;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-38!57;UBERON:0005068!1.14e-38!57;UBERON:0006241!1.14e-38!57;UBERON:0007135!1.14e-38!57;UBERON:0007023!6.55e-32!115;UBERON:0002780!6.90e-31!41;UBERON:0001890!6.90e-31!41;UBERON:0006240!6.90e-31!41;UBERON:0002616!7.97e-31!59;UBERON:0003080!4.63e-30!42;UBERON:0000955!1.17e-27!69;UBERON:0006238!1.17e-27!69;UBERON:0001017!4.40e-27!82;UBERON:0002346!1.05e-26!90;UBERON:0001893!2.25e-26!34;UBERON:0003075!6.33e-26!86;UBERON:0007284!6.33e-26!86;UBERON:0005743!1.45e-25!86;UBERON:0000073!9.24e-25!94;UBERON:0001016!9.24e-25!94;UBERON:0002791!9.56e-24!33;UBERON:0002020!9.65e-23!34;UBERON:0003528!9.65e-23!34;UBERON:0003056!9.52e-22!61;UBERON:0001869!3.16e-21!32;UBERON:0000033!5.02e-16!123;UBERON:0002308!1.66e-15!9;UBERON:0000125!1.66e-15!9;UBERON:0000153!5.19e-15!129;UBERON:0007811!5.19e-15!129;UBERON:0001950!2.15e-14!20;UBERON:0009663!3.25e-14!7;UBERON:0002619!5.31e-13!22;UBERON:0000924!5.68e-13!173;UBERON:0006601!5.68e-13!173;UBERON:0002298!8.69e-13!8;UBERON:0004121!2.85e-12!169;UBERON:0000200!2.04e-11!6;UBERON:0000956!2.58e-11!25;UBERON:0000203!2.58e-11!25;UBERON:0002420!5.30e-11!9;UBERON:0007245!5.30e-11!9;UBERON:0010009!5.30e-11!9;UBERON:0010011!5.30e-11!9;UBERON:0000454!5.30e-11!9;UBERON:0005162!4.77e-10!2;UBERON:0000122!4.77e-10!2;UBERON:0000025!5.44e-10!194;UBERON:0000369!1.04e-09!4;UBERON:0002435!1.04e-09!4;UBERON:0000204!1.04e-09!4;UBERON:0010082!1.04e-09!4;UBERON:0003076!1.27e-09!15;UBERON:0003057!1.27e-09!15;UBERON:0004732!5.86e-08!13;UBERON:0000477!2.62e-07!286;UBERON:0004111!7.43e-07!241;UBERON:0002240!8.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001781,1.44e-09,4;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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|short_description=p17@LPGAT1 | |||
}} |
Latest revision as of 23:11, 24 September 2015
Short description: | p17@LPGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LPGAT1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -218bp_to_HQ447838_5end |
EntrezGene: | LPGAT1 |
HGNC: | 28985 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
layer of retina | 1.44e-09 | 4 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |