FFCP PHASE1:Hg19::chr1:75600308..75600316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=431707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28838 | |||
|TSSclassifier=strong | |||
|UniProt=E9PGE3 | |||
|association_with_transcript=-250bp_to_ENST00000356261,uc001dgq.2_5end | |||
|cluster_id=chr1:75600308..75600316,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_8_at_LHX8_5end | |||
|id=chr1:75600308..75600316,+ | |||
|ontology_enrichment_celltype=CL:0002552!6.02e-23!5;CL:0002580!4.34e-22!3;CL:0002556!1.80e-11!6;CL:0000057!1.48e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002617;5.15e-21;2!CL:0002556;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.81e-21,2;CL:0002556,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.81e-40;1!UBERON:0003852;1.81e-40;1!UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@LHX8 | |||
}} |
Latest revision as of 05:36, 19 September 2015
Short description: | p8@LHX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LHX8_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -250bp_to_ENST00000356261, uc001dgq.2_5end |
EntrezGene: | LHX8 |
HGNC: | 28838 |
UniProt: | E9PGE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.81e-21 | 2 |
fibroblast of periodontium | 6.78e-08 | 6 |