FFCP PHASE1:Hg19::chr2:191045562..191045606,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84281 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28191 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BSF0 | |||
|association_with_transcript=0bp_to_ENST00000340623,NM_001042519,uc002urs.2_5end | |||
|cluster_id=chr2:191045562..191045606,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_C2orf88_5end | |||
|id=chr2:191045562..191045606,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.75e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.32e-07;12!CL:0000136;2.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.15e-08,15;CL:0002334,1.51e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-43!115;UBERON:0001049!2.66e-13!57;UBERON:0005068!2.66e-13!57;UBERON:0006241!2.66e-13!57;UBERON:0007135!2.66e-13!57;UBERON:0002616!1.66e-10!59;UBERON:0003080!1.72e-09!42;UBERON:0002780!2.94e-09!41;UBERON:0001890!2.94e-09!41;UBERON:0006240!2.94e-09!41;UBERON:0000479!1.27e-08!787;UBERON:0000955!1.54e-08!69;UBERON:0006238!1.54e-08!69;UBERON:0002020!4.08e-08!34;UBERON:0003528!4.08e-08!34;UBERON:0001017!5.83e-08!82;UBERON:0001893!5.98e-08!34;UBERON:0003075!8.22e-08!86;UBERON:0007284!8.22e-08!86;UBERON:0005743!9.29e-08!86;UBERON:0002791!1.07e-07!33;UBERON:0000073!2.49e-07!94;UBERON:0001016!2.49e-07!94;UBERON:0002346!4.84e-07!90;UBERON:0001869!5.16e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.97e-14;114!UBERON:0000178;3.35e-08;15!UBERON:0000179;3.35e-08;15!UBERON:0000463;3.35e-08;15!UBERON:0002780;5.35e-08;41!UBERON:0001890;5.35e-08;41!UBERON:0000073;6.00e-08;53!UBERON:0002616;6.00e-08;53!UBERON:0001013;1.21e-07;14!UBERON:0001893;2.07e-07;34!UBERON:0003528;2.13e-07;34!UBERON:0002020;2.13e-07;34!UBERON:0000125;3.22e-07;9!UBERON:0002308;3.22e-07;9!UBERON:0002791;6.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.27e-54,114;UBERON:0001049,1.09e-14,56;UBERON:0005068,1.09e-14,56;UBERON:0006241,1.09e-14,56;UBERON:0007135,1.09e-14,56;UBERON:0000073,5.17e-13,53;UBERON:0002616,5.17e-13,53;UBERON:0002780,1.20e-10,41;UBERON:0001890,1.20e-10,41;UBERON:0003080,1.20e-10,41;UBERON:0006240,1.20e-10,41;UBERON:0003075,2.60e-09,82;UBERON:0007284,2.60e-09,82;UBERON:0000955,4.96e-09,68;UBERON:0006238,4.96e-09,68;UBERON:0003528,7.12e-09,34;UBERON:0002020,7.12e-09,34;UBERON:0001893,1.13e-08,34;UBERON:0010314,1.37e-08,132;UBERON:0001017,2.08e-08,81;UBERON:0002346,3.29e-08,86;UBERON:0000178,3.32e-08,15;UBERON:0000179,3.32e-08,15;UBERON:0000463,3.32e-08,15;UBERON:0010371,6.53e-08,104;UBERON:0002791,8.91e-08,32;UBERON:0001013,1.09e-07,14;UBERON:0001869,1.66e-07,32;UBERON:0001016,3.23e-07,89;UBERON:0000125,3.65e-07,9;UBERON:0002308,3.65e-07,9 | |||
|phase1_expression=6.54042165374004,7.70761886007539,5.21531295155093,8.00586386825043,5.36353313312745,6.10636966870258,22.796989035148,0.631719873426831,7.31319758959548,1.47440361900905,0,0,0.527533956456907,0,0.331397375727916,2.01697543935533,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,0.382067028739756,0.328402357799783,0.550975469195755,4.72037132218685,3.45446458287491,1.39334510984468,2.75826367343678,0,0.369754010166788,3.17615522379237,2.41687695228617,3.52320527201817,0.553995408531877,0.200544447470142,0.217010870715852,0.671746422719773,0,0,0.290796477559129,0,0,0.464858073811369,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,5.27988733383968,7.09980194640771,9.7846017924991,5.12076267079809,1.60158394814405,7.47178171940828,3.96626923670917,4.77026877267682,1.70763890732835,1.17447437874188,2.29363936875137,11.8954195721123,8.96813700770458,8.42829071280246,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0,0.434539556882471,0,0,0.189069634328136,0.221729397462564,0.087834785693126,1.70272798147026,0.728590576585084,0.370784442784429,0,0,0,5.96226560763355,5.71994910780128,3.34311751196608,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0,2.63560834872127,7.75560528296651,0,0.496971951695318,0.633152558322899,0.264818361626438,0.860509862246441,4.61068896857864,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0.234321431833797,3.43376084513353,1.71141546463335,0.896692083310806,0.23486899728753,2.5899671098901,0.842704840213491,0.204154171254893,0.61417158655884,0,2.37600571456411,0.494533858557114,0,1.43723628363248,0.841680569770331,0.625592599359821,0,0,0.30648779579902,4.95785594391769,0.113432183160021,0,0,0.423863802319124,0,0.412210116953756,0,0,0.675105328965065,0.876933046450788,0,0.184099797284599,0,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0.860413786167011,0,0.265059536642971,0,0.310983165046111,0.504641701751257,0,4.69348596989448,0,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,1.26755034821831,0,2.95394953340702,0,0.860919069801795,0,0.109750285408626,1.1240175325762,0.402115889646523,0.833296006426766,0.325808305310325,0,0,0,0.117408694235822,0.577465791044295,0.462985512576611,0,0,0,0,0.702012795417713,0.148631162288728,1.87467667973554,1.6798212819886,1.13420077793909,0,0,0.383382679165211,0,0.704387472105808,18.6595303986695,39.3447472828305,15.275334444592,1.14296209725904,0.381988425558278,0,0,2.26220483947312,0.901029173531752,6.5740079505033,0.112131084345361,0.43596006883328,0.1466765716419,0.517086863031111,3.57656445851882,2.535908257668,0.26593811658487,1.04007436911366,0.257207374262142,0,0.532844358032199,0,0,0,1.95441710576241,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,4.27910715122155,1.01346914667305,0,1.96967059563885,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,5.99205619157746,11.966458368161,17.8198670777495,0,0,0,0,0.535286966391485,0.315404830067869,0.234282829985426,0.601892199455438,0,0,1.99267679560631,1.84369168541703,1.12948698808508,0,0,5.58273670531796,7.54999702865159,5.65656056358255,0,0,0.30239029332968,8.43566546583841,4.29693525206575,5.3325417942284,3.45975702990393,8.69902323413396,19.4633244583765,8.90508398669946,6.47680713971153,9.23320971628261,17.5752113869552,0.519254429183621,19.1747124458933,0.241718899183244,0.200506470303285,0.736647911487171,0.114814448164607,0.546273504020151,0.131124414959424,0,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0.764628819135115,0,0,36.1778796465792,43.1368494191086,0.256450125116389,0,0.976135183992909,3.81251743096572,0.457847324091717,0.41254749960294,1.14853107599234,1.30012049207304,1.6068392984416,7.54031602678551,2.15668063960502,1.99554777143968,4.13509717453592,1.18162269355101,1.16013355131383,1.53407929348982,1.69160867728801,0.661139661443912,0.384380134730212,0.127612712494584,0.4046311234222,6.97268323945929,1.88887408098384,1.3940745403212,0.308033580176089,0,5.21959795245044,0,0,0.372158369359667,0.316379424718726,0.953150969619124,0.511795582622668,0.42793898803392,0.95460974377781,0,0.359744915166629,0,0.589062011728432,0.404364963146632,1.58510321173008,1.68503382495592,0,3.41198885483798,1.05650146756755,0.136499911407986,0.141405431953713,5.65040583101214,0,0.66343897524122,0.876901770507525,0,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0.354761064070598,0.633322905892992,0,0,0,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| |||
|short_description=p1@C2orf88 | |||
}} |
Latest revision as of 02:42, 19 September 2015
Short description: | p1@C2orf88 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf88_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000340623, NM_001042519, uc002urs.2_5end |
EntrezGene: | C2orf88 |
HGNC: | 28191 |
UniProt: | Q9BSF0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.15e-08 | 15 |
preadipocyte | 1.51e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.27e-54 | 114 |
neural tube | 1.09e-14 | 56 |
neural rod | 1.09e-14 | 56 |
future spinal cord | 1.09e-14 | 56 |
neural keel | 1.09e-14 | 56 |
regional part of nervous system | 5.17e-13 | 53 |
regional part of brain | 5.17e-13 | 53 |
regional part of forebrain | 1.20e-10 | 41 |
forebrain | 1.20e-10 | 41 |
anterior neural tube | 1.20e-10 | 41 |
future forebrain | 1.20e-10 | 41 |
neural plate | 2.60e-09 | 82 |
presumptive neural plate | 2.60e-09 | 82 |
brain | 4.96e-09 | 68 |
future brain | 4.96e-09 | 68 |
brain grey matter | 7.12e-09 | 34 |
gray matter | 7.12e-09 | 34 |
telencephalon | 1.13e-08 | 34 |
structure with developmental contribution from neural crest | 1.37e-08 | 132 |
central nervous system | 2.08e-08 | 81 |
neurectoderm | 3.29e-08 | 86 |
blood | 3.32e-08 | 15 |
haemolymphatic fluid | 3.32e-08 | 15 |
organism substance | 3.32e-08 | 15 |
ecto-epithelium | 6.53e-08 | 104 |
regional part of telencephalon | 8.91e-08 | 32 |
adipose tissue | 1.09e-07 | 14 |
cerebral hemisphere | 1.66e-07 | 32 |
nervous system | 3.23e-07 | 89 |
neural nucleus | 3.65e-07 | 9 |
nucleus of brain | 3.65e-07 | 9 |