FFCP PHASE1:Hg19::chr3:192635973..192635996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151963 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30438 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYB1 | |||
|association_with_transcript=-23bp_to_ENST00000392452,NM_178496,uc011bsp.1_5end | |||
|cluster_id=chr3:192635973..192635996,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_2_at_MB21D2_5end | |||
|id=chr3:192635973..192635996,- | |||
|ontology_enrichment_celltype=CL:0002057!6.67e-20!42;CL:0000860!3.88e-18!45;CL:0002009!4.46e-15!65;CL:0002194!5.75e-14!63;CL:0000576!5.75e-14!63;CL:0000040!5.75e-14!63;CL:0000559!5.75e-14!63;CL:0000557!3.05e-11!71;CL:0000839!9.33e-10!70;CL:0000766!2.08e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-28;33!CL:0002057;6.02e-28;33!CL:0000473;3.05e-21;39!CL:0000234;3.05e-21;39!CL:0000576;7.17e-16;48!CL:0000766;2.13e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.47e-30,42;CL:0002057,5.47e-30,42;CL:0000473,1.94e-27,48;CL:0000234,1.94e-27,48;CL:0002009,2.11e-23,61;CL:0002194,1.66e-21,59;CL:0000576,1.66e-21,59;CL:0000040,1.66e-21,59;CL:0000559,1.66e-21,59;CL:0000557,6.26e-20,67;CL:0000766,2.24e-18,72;CL:0000839,1.06e-17,66;CL:0000738,8.96e-15,136;CL:0002087,3.66e-13,115;CL:0002031,4.31e-12,120;CL:0000763,3.76e-11,108;CL:0000049,3.76e-11,108;CL:0000037,1.62e-08,168;CL:0002032,4.27e-08,161;CL:0000837,4.27e-08,161;CL:0000988,2.86e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.41e-10!82;UBERON:0002371!6.62e-10!80;UBERON:0005743!1.36e-09!86;UBERON:0002390!4.06e-09!102;UBERON:0003061!4.06e-09!102;UBERON:0001049!5.49e-09!57;UBERON:0005068!5.49e-09!57;UBERON:0006241!5.49e-09!57;UBERON:0007135!5.49e-09!57;UBERON:0001474!1.25e-08!86;UBERON:0003080!2.59e-08!42;UBERON:0000073!2.97e-08!94;UBERON:0001016!2.97e-08!94;UBERON:0001893!4.55e-08!34;UBERON:0002780!5.39e-08!41;UBERON:0001890!5.39e-08!41;UBERON:0006240!5.39e-08!41;UBERON:0002791!7.71e-08!33;UBERON:0002193!9.00e-08!112;UBERON:0002619!1.11e-07!22;UBERON:0001950!1.94e-07!20;UBERON:0001869!2.02e-07!32;UBERON:0002020!2.09e-07!34;UBERON:0003528!2.09e-07!34;UBERON:0000955!3.15e-07!69;UBERON:0006238!3.15e-07!69;UBERON:0003075!4.16e-07!86;UBERON:0007284!4.16e-07!86;UBERON:0002616!9.36e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.60e-09;20!UBERON:0002619;4.37e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-17,76;UBERON:0002390,5.92e-16,98;UBERON:0003061,5.92e-16,98;UBERON:0001474,3.95e-15,82;UBERON:0002193,5.85e-13,108;UBERON:0002405,1.54e-12,93;UBERON:0004765,1.66e-12,90;UBERON:0001434,3.28e-11,100;UBERON:0001950,1.16e-09,20;UBERON:0003081,1.41e-09,203;UBERON:0002619,2.13e-08,22;UBERON:0001893,1.77e-07,34;UBERON:0002780,2.38e-07,41;UBERON:0001890,2.38e-07,41;UBERON:0003080,2.38e-07,41;UBERON:0006240,2.38e-07,41;UBERON:0000956,6.83e-07,25;UBERON:0000203,6.83e-07,25;UBERON:0001017,7.67e-07,81;UBERON:0002791,9.78e-07,32;UBERON:0001049,9.87e-07,56;UBERON:0005068,9.87e-07,56;UBERON:0006241,9.87e-07,56;UBERON:0007135,9.87e-07,56 | |||
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| |||
|short_description=p2@MB21D2 | |||
}} |
Latest revision as of 11:17, 17 September 2015
Short description: | p2@MB21D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MB21D2_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -23bp_to_ENST00000392452, NM_178496, uc011bsp.1_5end |
EntrezGene: | MB21D2 |
HGNC: | 30438 |
UniProt: | Q8IYB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.47e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.47e-30 | 42 |
defensive cell | 1.94e-27 | 48 |
phagocyte | 1.94e-27 | 48 |
macrophage dendritic cell progenitor | 2.11e-23 | 61 |
monopoietic cell | 1.66e-21 | 59 |
monocyte | 1.66e-21 | 59 |
monoblast | 1.66e-21 | 59 |
promonocyte | 1.66e-21 | 59 |
granulocyte monocyte progenitor cell | 6.26e-20 | 67 |
myeloid leukocyte | 2.24e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.06e-17 | 66 |
leukocyte | 8.96e-15 | 136 |
nongranular leukocyte | 3.66e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 4.31e-12 | 120 |
myeloid cell | 3.76e-11 | 108 |
common myeloid progenitor | 3.76e-11 | 108 |
hematopoietic stem cell | 1.62e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.27e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.27e-08 | 161 |
hematopoietic cell | 2.86e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-17 | 76 |
hematopoietic system | 5.92e-16 | 98 |
blood island | 5.92e-16 | 98 |
bone element | 3.95e-15 | 82 |
hemolymphoid system | 5.85e-13 | 108 |
immune system | 1.54e-12 | 93 |
skeletal element | 1.66e-12 | 90 |
skeletal system | 3.28e-11 | 100 |
neocortex | 1.16e-09 | 20 |
lateral plate mesoderm | 1.41e-09 | 203 |
regional part of cerebral cortex | 2.13e-08 | 22 |
telencephalon | 1.77e-07 | 34 |
regional part of forebrain | 2.38e-07 | 41 |
forebrain | 2.38e-07 | 41 |
anterior neural tube | 2.38e-07 | 41 |
future forebrain | 2.38e-07 | 41 |
cerebral cortex | 6.83e-07 | 25 |
pallium | 6.83e-07 | 25 |
central nervous system | 7.67e-07 | 81 |
regional part of telencephalon | 9.78e-07 | 32 |
neural tube | 9.87e-07 | 56 |
neural rod | 9.87e-07 | 56 |
future spinal cord | 9.87e-07 | 56 |
neural keel | 9.87e-07 | 56 |