FFCP PHASE1:Hg19::chr6:136359130..136359171,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8792 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-2bp_to_uc003qgr.2_5end | |||
|cluster_id=chr6:136359130..136359171,+ | |||
|description=CAGE_peak_3_at_PDE7B_5end | |||
|id=chr6:136359130..136359171,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-23!180;CL:0000680!2.21e-19!57;CL:0000056!2.21e-19!57;CL:0000355!2.21e-19!57;CL:0000187!4.05e-19!54;CL:0000057!6.34e-19!75;CL:0000183!8.59e-18!59;CL:0000393!4.78e-15!60;CL:0000211!4.78e-15!60;CL:0000192!5.02e-15!42;CL:0000514!5.02e-15!42;CL:0000359!2.27e-14!32;CL:0002620!2.18e-12!23;CL:0000222!3.01e-12!119;CL:0002494!1.31e-08!16;CL:0002539!5.63e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.45e-15;32!CL:0002620;5.48e-15;23!CL:0000192;4.44e-13;43!CL:0000187;7.02e-11;55!CL:0002494;6.89e-09;16!CL:0000393;7.68e-09;61!CL:0000211;7.68e-09;61!CL:0000057;1.81e-08;73!CL:0002539;1.22e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.96e-22,76;CL:0000187,7.53e-21,55;CL:0000680,1.07e-20,58;CL:0000056,1.07e-20,58;CL:0000355,1.07e-20,58;CL:0000192,1.32e-17,43;CL:0000514,1.32e-17,43;CL:0000393,3.51e-17,61;CL:0000211,3.51e-17,61;CL:0000359,6.41e-16,32;CL:0002620,1.43e-15,23;CL:0000222,3.42e-12,121;CL:0002494,7.46e-09,16;CL:0000048,6.09e-08,427;CL:0002539,1.40e-07,10;CL:0000723,2.44e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;4.44e-13;43!CL:0000355;1.76e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.73e-25!83;UBERON:0002329!2.73e-25!83;UBERON:0003077!2.73e-25!83;UBERON:0003059!2.73e-25!83;UBERON:0007282!2.73e-25!83;UBERON:0009618!2.73e-25!83;UBERON:0007285!2.73e-25!83;UBERON:0004290!5.74e-25!70;UBERON:0002049!8.73e-22!79;UBERON:0007798!8.73e-22!79;UBERON:0004872!1.20e-21!84;UBERON:0002385!2.29e-21!63;UBERON:0001015!2.29e-21!63;UBERON:0000383!2.29e-21!63;UBERON:0001009!6.76e-21!113;UBERON:0001134!7.45e-21!61;UBERON:0002036!7.45e-21!61;UBERON:0003082!7.45e-21!61;UBERON:0004535!4.67e-20!110;UBERON:0000486!2.50e-19!82;UBERON:0000475!1.00e-17!365;UBERON:0001981!2.06e-17!60;UBERON:0007500!2.06e-17!60;UBERON:0004537!2.06e-17!60;UBERON:0006965!2.06e-17!60;UBERON:0001637!2.21e-17!42;UBERON:0003509!2.21e-17!42;UBERON:0004572!2.21e-17!42;UBERON:0000055!7.11e-17!69;UBERON:0000119!1.57e-16!312;UBERON:0004573!4.13e-16!33;UBERON:0004571!4.13e-16!33;UBERON:0000483!9.01e-16!309;UBERON:0000477!1.08e-15!286;UBERON:0000481!2.24e-14!347;UBERON:0000468!6.74e-14!659;UBERON:0003914!4.78e-13!118;UBERON:0005256!5.72e-13!143;UBERON:0007100!7.88e-13!27;UBERON:0004111!1.20e-12!241;UBERON:0000025!3.81e-12!194;UBERON:0000948!3.89e-12!24;UBERON:0005498!3.89e-12!24;UBERON:0004140!3.89e-12!24;UBERON:0009881!3.89e-12!24;UBERON:0004141!3.89e-12!24;UBERON:0003084!3.89e-12!24;UBERON:0007005!3.89e-12!24;UBERON:0004139!3.89e-12!24;UBERON:0004291!3.89e-12!24;UBERON:0007023!6.96e-12!115;UBERON:0000467!3.53e-11!625;UBERON:0000480!5.12e-11!626;UBERON:0000490!1.17e-10!138;UBERON:0000947!4.18e-10!21;UBERON:0010191!4.18e-10!21;UBERON:0002199!1.34e-09!45;UBERON:0002416!1.34e-09!45;UBERON:0003102!2.02e-08!95;UBERON:0002097!2.74e-08!40;UBERON:0002050!1.53e-07!605;UBERON:0005423!1.53e-07!605;UBERON:0001135!1.57e-07!15;UBERON:0000922!2.94e-07!612;UBERON:0000479!2.97e-07!787;UBERON:0000923!3.02e-07!604;UBERON:0005291!3.02e-07!604;UBERON:0006598!3.02e-07!604;UBERON:0002532!3.02e-07!604;UBERON:0002346!4.46e-07!90;UBERON:0004237!5.63e-07!10;UBERON:0004695!5.63e-07!10;UBERON:0002111!5.63e-07!10;UBERON:0004178!5.63e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.14e-15;33!UBERON:0004571;1.14e-15;33!UBERON:0001637;5.39e-13;42!UBERON:0003509;5.39e-13;42!UBERON:0004572;5.39e-13;42!UBERON:0000948;6.38e-12;22!UBERON:0007100;7.37e-12;25!UBERON:0002385;1.17e-10;31!UBERON:0001015;1.17e-10;31!UBERON:0000383;1.17e-10;31!UBERON:0000947;1.55e-09;21!UBERON:0010191;1.55e-09;21!UBERON:0007500;5.75e-09;56!UBERON:0001981;5.75e-09;56!UBERON:0004537;5.75e-09;56!UBERON:0001135;3.56e-08;15!UBERON:0002049;6.30e-08;75!UBERON:0007798;6.30e-08;75!UBERON:0004237;1.22e-07;10!UBERON:0004695;1.22e-07;10!UBERON:0002111;1.22e-07;10!UBERON:0004178;1.22e-07;10!UBERON:0002097;1.24e-07;41!UBERON:0002199;1.32e-07;46!UBERON:0002416;1.32e-07;46!UBERON:0000055;3.59e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.26e-27,71;UBERON:0003059,1.26e-27,71;UBERON:0007282,1.26e-27,71;UBERON:0004290,1.26e-27,71;UBERON:0009618,1.26e-27,71;UBERON:0007524,3.87e-27,73;UBERON:0003077,6.24e-27,72;UBERON:0007285,6.24e-27,72;UBERON:0007503,2.53e-24,78;UBERON:0002385,3.43e-23,64;UBERON:0001015,3.43e-23,64;UBERON:0000383,3.43e-23,64;UBERON:0000486,8.11e-23,83;UBERON:0001134,1.56e-22,62;UBERON:0002036,1.56e-22,62;UBERON:0003082,1.56e-22,62;UBERON:0001009,3.24e-21,112;UBERON:0002049,5.48e-21,78;UBERON:0007798,5.48e-21,78;UBERON:0004872,6.45e-21,83;UBERON:0004535,7.95e-21,109;UBERON:0001637,4.32e-18,42;UBERON:0003509,4.32e-18,42;UBERON:0004572,4.32e-18,42;UBERON:0007500,2.33e-17,59;UBERON:0001981,2.33e-17,59;UBERON:0004537,2.33e-17,59;UBERON:0006965,2.33e-17,59;UBERON:0004573,8.27e-17,33;UBERON:0004571,8.27e-17,33;UBERON:0000055,7.67e-16,68;UBERON:0005256,1.39e-15,122;UBERON:0000490,1.58e-14,148;UBERON:0003914,4.39e-14,117;UBERON:0000948,2.63e-13,24;UBERON:0005498,2.63e-13,24;UBERON:0004140,2.63e-13,24;UBERON:0009881,2.63e-13,24;UBERON:0004141,2.63e-13,24;UBERON:0003084,2.63e-13,24;UBERON:0007005,2.63e-13,24;UBERON:0004139,2.63e-13,24;UBERON:0004291,2.63e-13,24;UBERON:0007100,2.82e-13,27;UBERON:0000119,5.61e-13,309;UBERON:0002199,2.02e-12,46;UBERON:0002416,2.02e-12,46;UBERON:0000483,3.24e-12,306;UBERON:0003104,2.67e-11,160;UBERON:0009142,2.67e-11,160;UBERON:0002097,1.36e-10,41;UBERON:0003102,2.82e-10,99;UBERON:0000947,2.12e-09,21;UBERON:0010191,2.12e-09,21;UBERON:0010314,6.35e-09,132;UBERON:0000926,1.10e-08,315;UBERON:0004120,1.10e-08,315;UBERON:0006603,1.10e-08,315;UBERON:0001135,7.97e-08,15;UBERON:0004237,1.40e-07,10;UBERON:0004695,1.40e-07,10;UBERON:0002111,1.40e-07,10;UBERON:0004178,1.40e-07,10;UBERON:0004111,4.02e-07,240;UBERON:0004797,6.25e-07,7;UBERON:0000025,7.12e-07,192;UBERON:0000479,9.64e-07,773 | |||
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| |||
|short_description=p3@PDE7B | |||
}} |
Latest revision as of 23:53, 24 September 2015
Short description: | p3@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE7B_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_uc003qgr.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.96e-22 | 76 |
muscle cell | 7.53e-21 | 55 |
muscle precursor cell | 1.07e-20 | 58 |
myoblast | 1.07e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-20 | 58 |
smooth muscle cell | 1.32e-17 | 43 |
smooth muscle myoblast | 1.32e-17 | 43 |
electrically responsive cell | 3.51e-17 | 61 |
electrically active cell | 3.51e-17 | 61 |
vascular associated smooth muscle cell | 6.41e-16 | 32 |
skin fibroblast | 1.43e-15 | 23 |
mesodermal cell | 3.42e-12 | 121 |
cardiocyte | 7.46e-09 | 16 |
multi fate stem cell | 6.09e-08 | 427 |
aortic smooth muscle cell | 1.40e-07 | 10 |
somatic stem cell | 2.44e-07 | 433 |