FFCP PHASE1:Mm9::chr2:129022323..129022355,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:129022323..129022355,+|id=chr2:129022323..129022355,+|ontology_enrichment_celltype=CL:0000049!4.93e-07!19|ontology_enrichment_celltype_v019_2=CL:0000213,4.30e-12,1;CL:0002078,4.30e-12,1;CL:0000115,4.30e-12,1;CL:0002262,4.30e-12,1;CL:1000398,4.30e-12,1;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1|ontology_enrichment_disease=DOID:0060100!1.36e-13!3;DOID:4045!1.36e-13!3;DOID:0050686!5.15e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.04e-15,3;DOID:4045,1.04e-15,3;DOID:0050686,2.45e-08,6|ontology_enrichment_uberon=UBERON:0002204!3.06e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.30e-12,1;UBERON:0001281,4.30e-12,1;UBERON:0000353,4.30e-12,1;UBERON:0003497,4.30e-12,1;UBERON:0003909,4.30e-12,1;UBERON:0003928,4.30e-12,1;UBERON:0003835,4.30e-12,1;UBERON:0003513,4.30e-12,1;UBERON:0001280,4.30e-12,1;UBERON:0004647,4.30e-12,1;UBERON:0002294,4.30e-12,1;UBERON:0001173,4.30e-12,1;UBERON:0004912,4.30e-12,1;UBERON:0005171,4.30e-12,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,9.37602413428561,0.523523743973798,108.234593797707,15.0270006690858,9.22469670759192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:129022323..129022355,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:129022323..129022355,+ | |||
|description=CAGE_peak_at_chr2:129022323..129022355,+ | |||
|id=chr2:129022323..129022355,+ | |||
|ontology_enrichment_celltype=CL:0000049!4.93e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.30e-12,1;CL:0002078,4.30e-12,1;CL:0000115,4.30e-12,1;CL:0002262,4.30e-12,1;CL:1000398,4.30e-12,1;CL:0000057,5.53e-12,1;CL:0000632,5.53e-12,1 | |||
|ontology_enrichment_disease=DOID:0060100!1.36e-13!3;DOID:4045!1.36e-13!3;DOID:0050686!5.15e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.04e-15,3;DOID:4045,1.04e-15,3;DOID:0050686,2.45e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.06e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.30e-12,1;UBERON:0001281,4.30e-12,1;UBERON:0000353,4.30e-12,1;UBERON:0003497,4.30e-12,1;UBERON:0003909,4.30e-12,1;UBERON:0003928,4.30e-12,1;UBERON:0003835,4.30e-12,1;UBERON:0003513,4.30e-12,1;UBERON:0001280,4.30e-12,1;UBERON:0004647,4.30e-12,1;UBERON:0002294,4.30e-12,1;UBERON:0001173,4.30e-12,1;UBERON:0004912,4.30e-12,1;UBERON:0005171,4.30e-12,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,9.37602413428561,0.523523743973798,108.234593797707,15.0270006690858,9.22469670759192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:129022323..129022355,+ | |||
}} |
Latest revision as of 00:32, 4 August 2015
Short description: | p@chr2:129022323..129022355, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:129022323..129022355, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.30e-12 | 1 |
meso-epithelial cell | 4.30e-12 | 1 |
endothelial cell | 4.30e-12 | 1 |
endothelial cell of sinusoid | 4.30e-12 | 1 |
endothelial cell of hepatic sinusoid | 4.30e-12 | 1 |
fibroblast | 5.53e-12 | 1 |
hepatic stellate cell | 5.53e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.30e-12 | 1 |
hepatic sinusoid | 4.30e-12 | 1 |
parenchyma | 4.30e-12 | 1 |
abdomen blood vessel | 4.30e-12 | 1 |
sinusoid | 4.30e-12 | 1 |
digestive system duct | 4.30e-12 | 1 |
abdominal segment blood vessel | 4.30e-12 | 1 |
trunk blood vessel | 4.30e-12 | 1 |
liver parenchyma | 4.30e-12 | 1 |
liver lobule | 4.30e-12 | 1 |
biliary system | 4.30e-12 | 1 |
biliary tree | 4.30e-12 | 1 |
biliary bud | 4.30e-12 | 1 |
hepatic duct | 4.30e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.04e-15 | 3 |
muscle cancer | 1.04e-15 | 3 |
organ system cancer | 2.45e-08 | 6 |