FFCP PHASE1:Hg19::chr7:24613093..24613110,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18167 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NZW5 | |||
|association_with_transcript=8bp_to_ENST00000396475,NM_016447,uc003swx.2,uc003swy.2_5end | |||
|cluster_id=chr7:24613093..24613110,+ | |||
|description=CAGE_peak_4_at_MPP6_5end | |||
|id=chr7:24613093..24613110,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.20e-09!53;CL:0000051!3.20e-09!53;CL:0000838!8.88e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.89e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.17e-13,53;CL:0000051,2.17e-13,53;CL:0000838,2.31e-12,52 | |||
|ontology_enrichment_development_v019=CL:0000051;1.89e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.57e-12!82;UBERON:0005743!7.05e-12!86;UBERON:0000073!9.57e-12!94;UBERON:0001016!9.57e-12!94;UBERON:0001893!7.11e-10!34;UBERON:0001049!1.65e-09!57;UBERON:0005068!1.65e-09!57;UBERON:0006241!1.65e-09!57;UBERON:0007135!1.65e-09!57;UBERON:0000153!1.86e-09!129;UBERON:0007811!1.86e-09!129;UBERON:0002791!1.88e-09!33;UBERON:0001869!2.14e-09!32;UBERON:0002020!5.52e-09!34;UBERON:0003528!5.52e-09!34;UBERON:0000955!7.04e-09!69;UBERON:0006238!7.04e-09!69;UBERON:0002780!2.63e-08!41;UBERON:0001890!2.63e-08!41;UBERON:0006240!2.63e-08!41;UBERON:0002346!3.19e-08!90;UBERON:0000033!3.25e-08!123;UBERON:0003075!5.11e-08!86;UBERON:0007284!5.11e-08!86;UBERON:0003080!8.56e-08!42;UBERON:0002616!1.68e-07!59;UBERON:0000956!2.00e-07!25;UBERON:0000203!2.00e-07!25;UBERON:0003056!2.52e-07!61;UBERON:0002619!3.66e-07!22;UBERON:0000924!6.23e-07!173;UBERON:0006601!6.23e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.30e-10;22!UBERON:0002791;3.47e-09;32!UBERON:0000956;4.61e-09;25!UBERON:0000203;4.61e-09;25!UBERON:0001869;6.58e-09;32!UBERON:0001950;7.49e-08;20!UBERON:0003528;1.04e-07;34!UBERON:0002020;1.04e-07;34!UBERON:0002780;1.13e-07;41!UBERON:0001890;1.13e-07;41!UBERON:0000349;1.25e-07;5!UBERON:0001893;5.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.78e-11,56;UBERON:0005068,6.78e-11,56;UBERON:0006241,6.78e-11,56;UBERON:0007135,6.78e-11,56;UBERON:0002619,7.63e-11,22;UBERON:0001016,1.42e-10,89;UBERON:0001017,2.03e-10,81;UBERON:0002346,2.62e-10,86;UBERON:0003075,4.26e-10,82;UBERON:0007284,4.26e-10,82;UBERON:0002791,1.38e-09,32;UBERON:0001869,1.38e-09,32;UBERON:0000956,2.91e-09,25;UBERON:0000203,2.91e-09,25;UBERON:0003528,7.64e-09,34;UBERON:0002020,7.64e-09,34;UBERON:0001893,7.64e-09,34;UBERON:0000073,2.76e-08,53;UBERON:0002616,2.76e-08,53;UBERON:0001950,4.72e-08,20;UBERON:0002780,6.82e-08,41;UBERON:0001890,6.82e-08,41;UBERON:0003080,6.82e-08,41;UBERON:0006240,6.82e-08,41;UBERON:0000349,1.27e-07,5;UBERON:0003056,1.46e-07,61;UBERON:0000955,3.71e-07,68;UBERON:0006238,3.71e-07,68;UBERON:0001870,7.07e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0.61130724598361,0.328402357799783,0.472264687882075,0,1.53531759238885,0.154816123316076,0,0.30120591877825,0,3.40855682553327,1.13735385989937,0.587200878669695,0,0.401088894940283,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,1.63841583378639,0.889509253863555,0.853460445133014,1.60158394814405,1.14950487990897,0.661044872784862,0,1.70763890732835,1.76171156811282,0.764546456250458,0,1.12101712596307,0.263384084775077,2.360517241366,1.96505381374582,1.23360899399706,0,0.651844533267181,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.802622484269139,2.09071047609954,0,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0.651083453856419,0,0.451725357233318,0,0,0.236777252044017,0,3.22570789159572,2.94184215361858,1.59306844271079,0,0,0.255725123687061,0.361439152384566,0,1.15877215168659,0.795285947051099,0.486634870302636,0.567208902984407,1.33037638477538,0.351339142772504,0.130979075497713,0,0,0,0,0,2.38490624305342,0,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0.446498641420399,0.22452937262617,0.563057402416611,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.280901613404497,0.61246251376468,0.368502951935304,0.206651562351531,0,0.741800787835671,0,0,0.336672227908132,0.625592599359821,0.554128230968366,0,0,0.300476117813194,1.02088964844019,0,0.213557388818567,0,0,0,0,0.18611685633159,0.506328996723799,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0,0.853815942907168,1.19276791489337,1.39432731443422,0.725627385107593,1.26160425437814,1.09493207722749,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0.491953754172454,0.857839051492628,0,0,0.201057944823262,0,0,1.03993478527958,2.88662684050547,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0,0,0.447792613514241,0.290633938513962,0,0.492663237895943,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0.718874566474748,1.14861935834114,0,0.289562613335158,0.61642896765115,0.358121926479791,1.45710687191585,1.18218456121156,1.07813787429759,1.54011643535698,0.76228387266739,0,2.31986643833309,0,1.27587750330633,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0.415941723061614,0,0,0.35142424497814,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0.343143423810856,0.620304078368662,0.431428401637234,1.60091336705167,0,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.280660094433074,0.640695746278505,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,1.20859449591622,0.40101294060657,0,0.459257792658427,0.546273504020151,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0.290012154876366,0.154048617114644,0,0,0.429680979473094,0.290033387828457,0.596586391912706,0.178064071293475,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.899362287916574,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.573645408816206,0.196498082026242,0,0.709522128141196,0,0,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,1.48642540100575,1.15415370381156,1.77854608371035,0.318852545457645,0.399158742865633,0,0,0.649243880549111,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0,0.445773537109913,0.284136146806413,0.47748896947538,0.296964680832639,0.614321404198464,0,1.40669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0.755798243562828,0.306806047506464,0.246169610922139,0.311039587661807,0.718946809178615,0,0,0.197286811273867,0,0,0.969332746095218,0.834912883456661,1.99613798001194,0.260427761085233,0,0,0.227586896570999,0,0,0,2.62444152044929,0.868124974666461,0,2.53252521113357,1.52581736317083,2.875060758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| |||
|short_description=p4@MPP6 | |||
}} |
Latest revision as of 21:32, 17 September 2015
Short description: | p4@MPP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MPP6_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000396475, NM_016447, uc003swx.2, uc003swy.2_5end |
EntrezGene: | MPP6 |
HGNC: | 18167 |
UniProt: | Q9NZW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.17e-13 | 53 |
common lymphoid progenitor | 2.17e-13 | 53 |
lymphoid lineage restricted progenitor cell | 2.31e-12 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.78e-11 | 56 |
neural rod | 6.78e-11 | 56 |
future spinal cord | 6.78e-11 | 56 |
neural keel | 6.78e-11 | 56 |
regional part of cerebral cortex | 7.63e-11 | 22 |
nervous system | 1.42e-10 | 89 |
central nervous system | 2.03e-10 | 81 |
neurectoderm | 2.62e-10 | 86 |
neural plate | 4.26e-10 | 82 |
presumptive neural plate | 4.26e-10 | 82 |
regional part of telencephalon | 1.38e-09 | 32 |
cerebral hemisphere | 1.38e-09 | 32 |
cerebral cortex | 2.91e-09 | 25 |
pallium | 2.91e-09 | 25 |
brain grey matter | 7.64e-09 | 34 |
gray matter | 7.64e-09 | 34 |
telencephalon | 7.64e-09 | 34 |
regional part of nervous system | 2.76e-08 | 53 |
regional part of brain | 2.76e-08 | 53 |
neocortex | 4.72e-08 | 20 |
regional part of forebrain | 6.82e-08 | 41 |
forebrain | 6.82e-08 | 41 |
anterior neural tube | 6.82e-08 | 41 |
future forebrain | 6.82e-08 | 41 |
limbic system | 1.27e-07 | 5 |
pre-chordal neural plate | 1.46e-07 | 61 |
brain | 3.71e-07 | 68 |
future brain | 3.71e-07 | 68 |
frontal cortex | 7.07e-07 | 3 |