FFCP PHASE1:Mm9::chr4:11249223..11249236,-: Difference between revisions
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{{FFCP|EntrezGene=381510|HGNC=|MCL_coexpression_id=9|UniProt=D6RI72|association_with_transcript=-1bp_to_ENSMUST00000142005_5end|description=CAGE_peak_3_at_Dpy19l4_5end|id=chr4:11249223..11249236,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.12e-09,3;UBERON:0006555,7.12e-09,3;UBERON:0005103,7.12e-09,3;UBERON:0000083,7.12e-09,3;UBERON:0009201,7.12e-09,3;UBERON:0004819,7.12e-09,3;UBERON:0006553,7.12e-09,3;UBERON:0003074,7.12e-09,3;UBERON:0003060,7.12e-09,3;UBERON:0000058,3.77e-08,7;UBERON:0006554,1.03e-07,18;UBERON:0001008,2.68e-07,19;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1;UBERON:0005177,4.53e-07,79;UBERON:0000080,7.43e-07,4;UBERON:0005904,7.43e-07,4;UBERON:0006947,7.43e-07,4;UBERON:0002120,7.43e-07,4;UBERON:0004054,7.43e-07,4;UBERON:0004875,7.43e-07,4;UBERON:0004876,7.43e-07,4;UBERON:0005721,7.43e-07,4;UBERON:0005754,7.43e-07,4;UBERON:0007297,7.43e-07,4|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.506884656097573,0.734187008646726,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0,0,0,0,0,0,0.919218786610021,0,0,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.681535739998656,0.453429360640713,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,0,0.693941307064543,0.608930956624282,0.230615497256059,0.150722640552623,0.352766121407114,0.502666365318702,0.494389935468748,0.289198713839823,1.76922110389975,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0.486723789203273,0.509196819251581,3.35898820647251,14.1524744722858,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0,0.402619256281115,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0,0.701358198903186,0.316182685621286,0.590440591918409,0.627994911365499,1.1105744752962,1.48226313543574,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0,1.17080188714679,0.788175720530955,0.44292937929755,0.318909537314974,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,0.163934945376675,0.757412781613119,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0,0,0.516856586336442,0,1.42598951353889,0.632073515871632,1.05418608574999,0,1.36175842301515,0,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0.822745103010605,0.608929898229199,1.17335854031855,0.21183207086382,0,0.98931751764888,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0.683483523191411,0,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0.209088296014469,1.09181281873089,0.404593039154462,0.41326727862668,0,0,0,0,0.598066184175915,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.39061315453185,0.314578033277133,0.483168241652012,0,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0.443971906748129,0.448569283047378,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.882365676478062,0|short_description=p3@Dpy19l4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381510 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=D6RI72 | |||
|association_with_transcript=-1bp_to_ENSMUST00000142005_5end | |||
|cluster_id=chr4:11249223..11249236,- | |||
|description=CAGE_peak_3_at_Dpy19l4_5end | |||
|id=chr4:11249223..11249236,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.12e-09,3;UBERON:0006555,7.12e-09,3;UBERON:0005103,7.12e-09,3;UBERON:0000083,7.12e-09,3;UBERON:0009201,7.12e-09,3;UBERON:0004819,7.12e-09,3;UBERON:0006553,7.12e-09,3;UBERON:0003074,7.12e-09,3;UBERON:0003060,7.12e-09,3;UBERON:0000058,3.77e-08,7;UBERON:0006554,1.03e-07,18;UBERON:0001008,2.68e-07,19;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1;UBERON:0005177,4.53e-07,79;UBERON:0000080,7.43e-07,4;UBERON:0005904,7.43e-07,4;UBERON:0006947,7.43e-07,4;UBERON:0002120,7.43e-07,4;UBERON:0004054,7.43e-07,4;UBERON:0004875,7.43e-07,4;UBERON:0004876,7.43e-07,4;UBERON:0005721,7.43e-07,4;UBERON:0005754,7.43e-07,4;UBERON:0007297,7.43e-07,4 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0.0797721589953364,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.125896817975577,0.506884656097573,0.734187008646726,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0,0,0,0,0,0,0.919218786610021,0,0,0.46081959976873,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.681535739998656,0.453429360640713,1.73918693221007,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0,0,0.45673551887624,0.258937883647172,0,0.693941307064543,0.608930956624282,0.230615497256059,0.150722640552623,0.352766121407114,0.502666365318702,0.494389935468748,0.289198713839823,1.76922110389975,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0.486723789203273,0.509196819251581,3.35898820647251,14.1524744722858,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0,0.402619256281115,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0,0.701358198903186,0.316182685621286,0.590440591918409,0.627994911365499,1.1105744752962,1.48226313543574,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0,1.17080188714679,0.788175720530955,0.44292937929755,0.318909537314974,0.81931657357869,1.03610989119537,0.289298117163023,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,0.163934945376675,0.757412781613119,0.315508219416257,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0.790575555893047,0,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,1.32745138339963,0,0,0,0,0,0.516856586336442,0,1.42598951353889,0.632073515871632,1.05418608574999,0,1.36175842301515,0,0.129358683782755,0.643011105094777,0.177340233642274,0.356737635204141,0.822745103010605,0.608929898229199,1.17335854031855,0.21183207086382,0,0.98931751764888,0.484393280087717,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0.683483523191411,0,0.370389054739423,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0.209088296014469,1.09181281873089,0.404593039154462,0.41326727862668,0,0,0,0,0.598066184175915,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.39061315453185,0.314578033277133,0.483168241652012,0,0,0,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0.443971906748129,0.448569283047378,0.167884616364078,0.386379188064381,0.375364950902364,0.36630324853453,0.428736758158132,0,0.564751842617067,0,0,0,0.685082519770642,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.882365676478062,0 | |||
|short_description=p3@Dpy19l4 | |||
}} |
Latest revision as of 04:13, 26 September 2015
Short description: | p3@Dpy19l4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dpy19l4_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -1bp_to_ENSMUST00000142005_5end |
EntrezGene: | Dpy19l4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.10e-07 | 1 |
meso-epithelial cell | 4.10e-07 | 1 |
endothelial cell | 4.10e-07 | 1 |
endothelial cell of sinusoid | 4.10e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epididymis | 7.12e-09 | 3 |
excretory tube | 7.12e-09 | 3 |
mesonephric epithelium | 7.12e-09 | 3 |
mesonephric tubule | 7.12e-09 | 3 |
nephric duct | 7.12e-09 | 3 |
kidney epithelium | 7.12e-09 | 3 |
renal duct | 7.12e-09 | 3 |
mesonephric duct | 7.12e-09 | 3 |
pronephric duct | 7.12e-09 | 3 |
duct | 3.77e-08 | 7 |
urinary system structure | 1.03e-07 | 18 |
renal system | 2.68e-07 | 19 |
bile duct | 4.10e-07 | 1 |
hepatic sinusoid | 4.10e-07 | 1 |
parenchyma | 4.10e-07 | 1 |
abdomen blood vessel | 4.10e-07 | 1 |
sinusoid | 4.10e-07 | 1 |
digestive system duct | 4.10e-07 | 1 |
abdominal segment blood vessel | 4.10e-07 | 1 |
trunk blood vessel | 4.10e-07 | 1 |
liver parenchyma | 4.10e-07 | 1 |
liver lobule | 4.10e-07 | 1 |
biliary system | 4.10e-07 | 1 |
biliary tree | 4.10e-07 | 1 |
biliary bud | 4.10e-07 | 1 |
hepatic duct | 4.10e-07 | 1 |
trunk region element | 4.53e-07 | 79 |
mesonephros | 7.43e-07 | 4 |
duct of male reproductive system | 7.43e-07 | 4 |
male genital duct | 7.43e-07 | 4 |
pronephros | 7.43e-07 | 4 |
internal male genitalia | 7.43e-07 | 4 |
nephrogenic cord | 7.43e-07 | 4 |
urogenital ridge | 7.43e-07 | 4 |
pronephric mesoderm | 7.43e-07 | 4 |
rostral part of nephrogenic cord | 7.43e-07 | 4 |
presumptive pronephric mesoderm | 7.43e-07 | 4 |