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FFCP PHASE1:Mm9::chr4:40917988..40918060,+: Difference between revisions

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{{FFCP|EntrezGene=74164|HGNC=|UniProt=B1AY10|association_with_transcript=12bp_to_NM_023739,uc008sic.1,uc008sid.1,uc008sie.1_5end|description=CAGE_peak_1_at_Nfx1_5end|id=chr4:40917988..40918060,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.12e-12!94;UBERON:0007811!2.80e-11!86;UBERON:0000955!5.97e-10!50;UBERON:0006238!5.97e-10!50;UBERON:0002616!1.24e-09!49;UBERON:0002791!7.83e-09!29;UBERON:0003528!7.83e-09!29;UBERON:0001893!7.83e-09!29;UBERON:0003080!7.90e-09!40;UBERON:0004121!1.06e-08!102;UBERON:0000924!1.06e-08!102;UBERON:0006601!1.06e-08!102;UBERON:0002346!1.16e-08!71;UBERON:0003075!1.16e-08!71;UBERON:0007284!1.16e-08!71;UBERON:0000033!1.30e-08!63;UBERON:0001049!1.78e-08!52;UBERON:0005068!1.78e-08!52;UBERON:0006241!1.78e-08!52;UBERON:0007135!1.78e-08!52;UBERON:0003056!1.88e-08!49;UBERON:0002780!2.21e-08!39;UBERON:0001890!2.21e-08!39;UBERON:0006240!2.21e-08!39;UBERON:0002020!4.61e-08!34;UBERON:0001017!4.77e-08!73;UBERON:0005743!4.77e-08!73;UBERON:0000475!1.28e-07!200;UBERON:0000073!4.03e-07!75;UBERON:0001016!4.03e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.52e-09,54;UBERON:0000955,5.10e-09,47;UBERON:0006238,5.10e-09,47;UBERON:0003528,7.83e-09,29;UBERON:0002791,7.83e-09,29;UBERON:0001893,7.83e-09,29;UBERON:0003080,7.90e-09,40;UBERON:0002616,1.04e-08,46;UBERON:0001049,1.78e-08,52;UBERON:0005068,1.78e-08,52;UBERON:0006241,1.78e-08,52;UBERON:0007135,1.78e-08,52;UBERON:0003056,1.88e-08,49;UBERON:0002780,2.21e-08,39;UBERON:0001890,2.21e-08,39;UBERON:0006240,2.21e-08,39;UBERON:0002020,4.61e-08,34;UBERON:0001017,4.77e-08,73;UBERON:0002346,7.26e-08,64;UBERON:0003075,7.26e-08,64;UBERON:0007284,7.26e-08,64;UBERON:0004121,7.58e-08,95;UBERON:0000924,7.58e-08,95;UBERON:0006601,7.58e-08,95;UBERON:0010371,1.24e-07,73;UBERON:0001016,4.03e-07,75|phase1_expression=48.0446541314382,24.0793031271159,11.8299802241279,30.246421130683,23.5420993074783,36.2619227329682,40.1813741824304,82.897173649492,110.378358166907,132.012392845604,104.442960617558,90.6211726187022,99.2964233600993,89.9555940891483,61.6253059358976,55.883173799592,55.2653883721236,89.9067171270977,96.6656756920458,70.873071850271,60.2956927171085,56.4965512333037,62.1655498150666,36.6382648196901,31.4290715062023,14.3557991028755,21.5380998079537,28.8731451799091,29.6436534351943,30.2436155711917,26.6076612786366,80.0138648559135,83.033746323917,47.5445043046316,45.6385559207014,52.0314439972081,44.5089196651965,31.3898723052681,25.0027310247616,40.3113282859825,49.9996764826362,36.2014107027976,44.181442125835,46.2041321970369,49.1678116414646,45.1525010317737,10.1710874765245,17.2239873540553,19.1126978978991,32.8586529435539,28.6972164331993,21.5628846547457,82.8846073925218,74.7123006271685,100.155952144454,43.476844690075,54.4413535883638,47.9575045818021,83.5566983350139,94.6893852896939,70.3552857891859,21.0083609882862,24.9002542911119,13.0485459005803,13.8441290759376,11.3676818391376,14.3808053048834,12.6792040756113,76.8340027205819,80.8685570606827,70.458862052713,45.7041575046086,54.9962666969518,79.1290562928603,86.2609239164127,87.325784727952,67.1706874096271,84.0182684600535,82.640314891859,92.4522876988659,97.4343404365663,85.9507061418654,66.4455537623287,70.34532625396,73.190360685092,62.4612601204175,75.8841058659219,71.950186088566,41.8765849132508,40.6574993374506,62.031000582159,27.5335640634044,87.7163020482998,41.5571457561119,48.7332313085752,76.164570806547,46.0657698032146,30.1661670963162,25.718814455684,27.2071472372962,39.7178443770239,68.0130330295885,58.6052051325285,14.2213340630666,48.7104842275232,41.8043778033913,50.0469200564635,47.8430456022861,139.049643518531,125.582049648842,46.1470969197921,60.5886301841161,69.4152646740736,66.9208524053644,95.2468527799209,68.4882922746731,75.1472701912497,61.1655279771226,60.1535175325915,53.8683610324873,47.701767987445,62.5489076544437,70.8288692628864,106.279429315192,88.5959569820915,44.9604417167121,61.2255286225253,49.1920239414594,65.4411669426283,86.1296176577731,91.0426199609067,80.1674766480075,86.0430384951768,72.6231898818139,76.2582123533586,79.3359776401335,59.6778672162853,52.8729625092895,67.9824220186585,76.1799518309036,63.8891374946875,43.4514977379264,63.2018075616776,61.1861560413003,68.4447181462358,71.4874559189462,56.1273330112776,68.8150966165782,58.6344940777331,71.8603104637713,67.0373783064645,63.7859581364243,73.4044737955578,71.7399463035663,64.8213729685022,68.6668220523802,82.8611561029617,63.3075851502199,47.1711408996684,51.988568906411,46.436159876257,53.2983701924604,55.3982681269392,57.0616272067471,48.9026747852989,53.2502733478434,44.8016580337364,50.3258625602501,48.7097155743902,51.0560813285986,52.1272445379852,46.3453960138303,41.9340720205907,32.6121597587703,75.2838015859575,78.9278376949112,34.0331346473312,48.1300031327651,66.7592224175282,69.903238229992,74.0987902602037,74.8245876352601,58.04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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74164
|HGNC=
|TSSclassifier=NA
|UniProt=B1AY10
|association_with_transcript=12bp_to_NM_023739,uc008sic.1,uc008sid.1,uc008sie.1_5end
|cluster_id=chr4:40917988..40918060,+
|description=CAGE_peak_1_at_Nfx1_5end
|id=chr4:40917988..40918060,+
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.52e-09,54;UBERON:0000955,5.10e-09,47;UBERON:0006238,5.10e-09,47;UBERON:0003528,7.83e-09,29;UBERON:0002791,7.83e-09,29;UBERON:0001893,7.83e-09,29;UBERON:0003080,7.90e-09,40;UBERON:0002616,1.04e-08,46;UBERON:0001049,1.78e-08,52;UBERON:0005068,1.78e-08,52;UBERON:0006241,1.78e-08,52;UBERON:0007135,1.78e-08,52;UBERON:0003056,1.88e-08,49;UBERON:0002780,2.21e-08,39;UBERON:0001890,2.21e-08,39;UBERON:0006240,2.21e-08,39;UBERON:0002020,4.61e-08,34;UBERON:0001017,4.77e-08,73;UBERON:0002346,7.26e-08,64;UBERON:0003075,7.26e-08,64;UBERON:0007284,7.26e-08,64;UBERON:0004121,7.58e-08,95;UBERON:0000924,7.58e-08,95;UBERON:0006601,7.58e-08,95;UBERON:0010371,1.24e-07,73;UBERON:0001016,4.03e-07,75
|phase1_expression=48.0446541314382,24.0793031271159,11.8299802241279,30.246421130683,23.5420993074783,36.2619227329682,40.1813741824304,82.897173649492,110.378358166907,132.012392845604,104.442960617558,90.6211726187022,99.2964233600993,89.9555940891483,61.6253059358976,55.883173799592,55.2653883721236,89.9067171270977,96.6656756920458,70.873071850271,60.2956927171085,56.4965512333037,62.1655498150666,36.6382648196901,31.4290715062023,14.3557991028755,21.5380998079537,28.8731451799091,29.6436534351943,30.2436155711917,26.6076612786366,80.0138648559135,83.033746323917,47.5445043046316,45.6385559207014,52.0314439972081,44.5089196651965,31.3898723052681,25.0027310247616,40.3113282859825,49.9996764826362,36.2014107027976,44.181442125835,46.2041321970369,49.1678116414646,45.1525010317737,10.1710874765245,17.2239873540553,19.1126978978991,32.8586529435539,28.6972164331993,21.5628846547457,82.8846073925218,74.7123006271685,100.155952144454,43.476844690075,54.4413535883638,47.9575045818021,83.5566983350139,94.6893852896939,70.3552857891859,21.0083609882862,24.9002542911119,13.0485459005803,13.8441290759376,11.3676818391376,14.3808053048834,12.6792040756113,76.8340027205819,80.8685570606827,70.458862052713,45.7041575046086,54.9962666969518,79.1290562928603,86.2609239164127,87.325784727952,67.1706874096271,84.0182684600535,82.640314891859,92.4522876988659,97.4343404365663,85.9507061418654,66.4455537623287,70.34532625396,73.190360685092,62.4612601204175,75.8841058659219,71.950186088566,41.8765849132508,40.6574993374506,62.031000582159,27.5335640634044,87.7163020482998,41.5571457561119,48.7332313085752,76.164570806547,46.0657698032146,30.1661670963162,25.718814455684,27.2071472372962,39.7178443770239,68.0130330295885,58.6052051325285,14.2213340630666,48.7104842275232,41.8043778033913,50.0469200564635,47.8430456022861,139.049643518531,125.582049648842,46.1470969197921,60.5886301841161,69.4152646740736,66.9208524053644,95.2468527799209,68.4882922746731,75.1472701912497,61.1655279771226,60.1535175325915,53.8683610324873,47.701767987445,62.5489076544437,70.8288692628864,106.279429315192,88.5959569820915,44.9604417167121,61.2255286225253,49.1920239414594,65.4411669426283,86.1296176577731,91.0426199609067,80.1674766480075,86.0430384951768,72.6231898818139,76.2582123533586,79.3359776401335,59.6778672162853,52.8729625092895,67.9824220186585,76.1799518309036,63.8891374946875,43.4514977379264,63.2018075616776,61.1861560413003,68.4447181462358,71.4874559189462,56.1273330112776,68.8150966165782,58.6344940777331,71.8603104637713,67.0373783064645,63.7859581364243,73.4044737955578,71.7399463035663,64.8213729685022,68.6668220523802,82.8611561029617,63.3075851502199,47.1711408996684,51.988568906411,46.436159876257,53.2983701924604,55.3982681269392,57.0616272067471,48.9026747852989,53.2502733478434,44.8016580337364,50.3258625602501,48.7097155743902,51.0560813285986,52.1272445379852,46.3453960138303,41.9340720205907,32.6121597587703,75.2838015859575,78.9278376949112,34.0331346473312,48.1300031327651,66.7592224175282,69.903238229992,74.0987902602037,74.8245876352601,58.0406694435112,57.0676878337677,43.1821446005506,48.5861916435832,46.9996840456504,53.9172039231519,57.7093697872596,44.0421510240569,43.8760241245629,44.0102213892152,76.2464961831388,57.6954988679131,71.0058734740407,56.2077664853067,59.5434135604611,65.4367199576672,58.1143776171924,65.686515850923,53.6935649217502,47.8780996016586,54.2508307569482,66.9048873921537,66.4369403482626,66.109461041147,68.161000786537,55.9531010625607,48.6335376902512,60.9915811395718,65.9890372974394,48.8719315474785,56.0696005456683,62.1475382606401,63.6556853153704,64.6601927544606,47.5403145833067,52.586343828607,60.2295399943131,52.8681038839652,66.1637804354625,66.3703285380986,61.2541548032991,68.6775655511445,65.4620012436538,53.0763522173213,64.9456793717507,57.3593546190327,56.7658976420654,47.8480878969955,43.6893004120716,44.2626119259425,55.7927750575307,51.1271342789587,53.1105414860559,70.0879335614021,73.2110690344331,74.5466326726412,42.4591508525589,44.1824122607653,57.1069877143425,57.3944954116059,61.1802449561149,69.3009514062401,65.2800115061415,68.7875969816863,68.0081978813822,66.6343356037791,72.7329511421603,75.8318306755465,81.3316688243379,56.9809931735217,68.7382968472091,73.4117047227783,94.2490482213736,53.8973012264059,61.3716820638445,66.577593153832,58.469774790393,68.5580379914958,65.6407864647282,73.7973470839336,61.3175490821721,67.3158294403288,51.6551182017494,55.6931933540209,73.1945152370644,71.1241321423675,50.1911693077087,49.0831810222346,68.8080106532021,56.1861775446522,62.6931768494081,63.6331743649513,88.0018905238914,101.679394014634,74.5385985425771,92.5011879001703,81.3780710547364,71.7723806645055,56.2243740254773,64.179091800319,49.5517422270746,70.4616147639937,70.5696737695132,54.692520010254,62.7809447783323,58.5825901284589,84.7504211870356,52.1614234910872,53.7131838780583,56.1205323817869,57.2147891550315,44.8695190467103,63.4253667130176,74.2116055012998,61.8870602908921,63.1446653963695,56.9926291377524,54.0806029003131,55.0472015130737,34.0282724579238,43.4210160527506,70.2113423788226,36.6400410144724,70.870842824846,58.5723056218126,64.5577945302238,52.6972079789143,70.7926165806361,77.9252064607806,74.8675212852713,89.6547394839828,67.1603855896297,51.2693411139001,75.8426689507628,53.3167316213132,64.2970591851819,63.2714407901862,63.9125303532909,66.5582538517237,55.8908840267855,62.3249804676716,71.2823136633922,62.5657882637549,62.3105824145674,78.74596763772,65.135416790503,67.6717263631284,58.2697085891093,104.777369992559,126.227396249532,117.687116071219,64.1389452186872,64.938136506109,52.0150612919033,56.5932520768734,107.838002367603,92.0545503465818,85.1601687538277,83.0698494487125,59.8049074556033,83.5800674120184,66.4746629702936,79.6526550273531,83.3094225964808,93.8004786597303,78.1818070745248,53.0353346155143,82.1991239206124,64.5373029750627,79.2527897642639,61.4166566499988,46.6962511463036,60.673356689841,57.0717108551737,64.5047611279549,61.152725246839,66.1580972713526,59.6059238780001,59.9305647807247,57.2384862499531,59.0436620863704,62.8707672493657,65.4746441588433,57.1011292572567,53.1590812036265,61.8235464564469,58.630642157906,61.2291531249714,55.7940684476731,70.2023192334147,64.6531443453321,56.9456311110983,58.5369513192872,66.2935672823364,58.2599648398747,61.7256498823512,57.1820787358519,64.1264180264918,64.2492737776412,57.7914417623653,74.6548584497017,57.2066223477896,59.4186285451337,61.0233793497167,65.994474563751,56.0302204563569,51.706527343354
|short_description=p1@Nfx1
}}

Latest revision as of 23:10, 26 September 2015

Short description:p1@Nfx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nfx1_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_NM_023739, uc008sic.1, uc008sid.1, uc008sie.1_5end
EntrezGene:Nfx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nfx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G748.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I330.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I736.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I840.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E982.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7110.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2132.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6104.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F190.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E499.30
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E889.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A161.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A355.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A555.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A289.91
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A496.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A670.87
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A360.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H256.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I962.17
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D231.43
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I121.54
GP2+ M cell, pool3.CNhs13240.11847-124I228.87
Ileum epithelium, pool1.CNhs13199.10252-104B929.64
Ileum epithelium, pool2.CNhs13232.10253-104C130.24
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I380.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G683.03
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F652.03
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F744.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G950.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H236.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H444.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D846.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D949.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B345.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C332.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C428.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A282.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I974.71
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1100.16
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C143.48
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E154.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C547.96
Mouse Granule cells, donor1.CNhs12131.11713-123C383.56
Mouse Granule cells, donor2.CNhs12357.11731-123E394.69
Mouse Granule cells, donor3.CNhs12108.11636-122C770.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.01
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C814.38
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D576.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F580.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D970.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D279.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F286.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D687.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D367.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F384.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D782.64
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D492.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F497.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D885.95
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E466.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E570.35
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D662.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F675.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E171.95
Mouse Schwann, donor1.CNhs12507.11728-123D941.88
Mouse Schwann, donor2.CNhs12573.11746-123F940.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G362.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F727.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C487.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.73
Mouse hepatocyte, donor8.CNhs13091.11824-124F676.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A746.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H168.01
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G148.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G350.05
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.84
accessory axillary lymph node, adult.CNhs10475.1063-29H9139.05
adrenal gland, adult.CNhs10508.49-24D7125.58
adrenal gland, embryo E14.CNhs11038.406-44C546.15
adrenal gland, embryo E16.CNhs11004.1254-43D660.59
adrenal gland, embryo E17.CNhs11043.1263-45I169.42
adrenal gland, embryo E18.CNhs11026.1262-18F566.92
adrenal gland, neonate N00.CNhs11191.1311-23C195.25
adrenal gland, neonate N25.CNhs11223.1377-27I368.49
amnion, adult pregnant day17.5.CNhs10488.583-22A875.15
aorta, adult.CNhs10498.46-23H161.17
bone (os femoris), adult.CNhs10483.56-12G260.15
bone (os femoris), neonate N02.CNhs11227.1985-43F553.87
bone (os femoris), neonate N16.CNhs11225.1525-43A647.70
bone (os femoris), neonate N20.CNhs11195.1350-25C362.55
cecum, adult.CNhs10467.37-13H470.83
cerebellum, adult.CNhs10494.15-8B2106.28
cerebellum, neonate N30.CNhs11135.1395-42I288.60
colon, adult.CNhs10468.36-18H744.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C761.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D149.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D465.44
corpora quadrigemina, adult.CNhs10501.16-22A486.13
corpus striatum, adult.CNhs10487.19-21D891.04
corpus striatum, neonate N00.CNhs11226.630-43F180.17
cortex, adult.CNhs10473.12-14D586.04
cortex, neonate N30.CNhs11107.1392-42F272.62
diencephalon, adult.CNhs10482.20-12F276.26
diencephalon, neonate N30.CNhs11201.1388-42B279.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B159.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A252.87
epididymis, adult.CNhs10490.58-23B267.98
eyeball, adult.CNhs10484.31-12G476.18
eyeball, embryo E12.CNhs11016.345-16C663.89
eyeball, embryo E14.CNhs10521.399-16E243.45
eyeball, embryo E15.CNhs10593.426-16C963.20
eyeball, embryo E17.CNhs11023.1261-18D461.19
eyeball, neonate N00.CNhs11207.633-15C668.44
eyeball, neonate N01.CNhs11140.1532-43E771.49
eyeball, neonate N02.CNhs11205.1551-44G856.13
eyeball, neonate N16.CNhs11188.777-19A268.82
forelimb, embryo E11.CNhs10596.335-25E258.63
forelimb, embryo E12.CNhs10600.359-14H271.86
forelimb, embryo E13.CNhs10589.384-1E267.04
forelimb, embryo E14.CNhs10577.413-26A863.79
forelimb, embryo E15.CNhs11007.437-20E773.40
forelimb, embryo E17.CNhs10598.1517-43C471.74
forelimb, embryo E18.CNhs11008.1520-43B564.82
gonad, embryo E13.CNhs11044.1564-45I668.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C882.86
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D263.31
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D547.17
heart, embryo E11.CNhs10586.331-24E951.99
heart, embryo E12.CNhs11015.353-12F546.44
heart, embryo E13.CNhs11013.376-3I953.30
heart, embryo E14.CNhs10597.403-26D455.40
heart, embryo E15.CNhs11017.431-16C857.06
heart, embryo E16.CNhs11021.457-17C648.90
heart, embryo E17.CNhs11025.479-18E553.25
heart, embryo E18.CNhs11030.1283-20G344.80
heart, neonate N00.CNhs11213.639-21E350.33
heart, neonate N03.CNhs11221.1349-25I248.71
heart, neonate N10.CNhs11118.749-24G151.06
heart, neonate N16.CNhs11209.782-15G152.13
heart, neonate N20.CNhs11127.821-26I646.35
heart, neonate N25.CNhs11196.1351-25D341.93
heart, neonate N30.CNhs11202.1390-42D232.61
hippocampus, adult.CNhs10478.13-16E875.28
hippocampus, neonate N00.CNhs11228.627-43G178.93
intestinal mucosa, adult.CNhs10506.860-29I334.03
intestine, adult.CNhs10496.178-9A348.13
intestine, embryo E12.CNhs11019.1251-16I566.76
intestine, embryo E13.CNhs11010.381-16D569.90
intestine, embryo E15.CNhs10602.976-16D874.10
intestine, embryo E16.CNhs10585.463-22H474.82
intestine, embryo E17.CNhs10582.482-18D358.04
intestine, embryo E18.CNhs10526.1289-20F757.07
intestine, neonate N00.CNhs11126.644-26D143.18
intestine, neonate N01.CNhs11192.1322-23E948.59
intestine, neonate N06.CNhs11102.688-20B847.00
intestine, neonate N07.CNhs11095.720-20F253.92
intestine, neonate N10.CNhs11098.755-23A557.71
intestine, neonate N20.CNhs11187.827-18D144.04
intestine, neonate N25.CNhs11121.1352-25E343.88
intestine, neonate N30.CNhs11131.1384-42G144.01
kidney, embryo E14.CNhs10606.411-4I976.25
kidney, embryo E15.CNhs10997.434-16F857.70
kidney, embryo E16.CNhs10584.464-22A571.01
kidney, embryo E17.CNhs11028.483-18I256.21
kidney, embryo E18.CNhs11001.1288-20C759.54
kidney, neonate N00.CNhs11214.646-21G765.44
kidney, neonate N10.CNhs11206.758-6D558.11
kidney, neonate N20.CNhs11113.832-19I165.69
kidney, neonate N25.CNhs11122.1353-25F353.69
kidney, neonate N30.CNhs11203.1385-42H147.88
liver, adult pregnant day01.CNhs10466.508-5B254.25
liver, embryo E12.CNhs10601.355-15F866.90
liver, embryo E13.CNhs10524.378-3H666.44
liver, embryo E14.CNhs10594.409-16E166.11
liver, embryo E15.CNhs10520.433-16D768.16
liver, embryo E16.CNhs10523.462-17F555.95
liver, embryo E17.CNhs10510.481-18A348.63
liver, embryo E18.CNhs10579.499-43G460.99
liver, neonate N00.CNhs11117.641-24F465.99
liver, neonate N03.CNhs11123.1345-25G248.87
liver, neonate N06.CNhs11101.684-20A856.07
liver, neonate N07.CNhs11103.716-20H262.15
liver, neonate N10.CNhs11115.751-24B963.66
liver, neonate N20.CNhs11220.823-25A364.66
liver, neonate N25.CNhs11198.1368-26H147.54
liver, neonate N30.CNhs11106.1382-42D152.59
lung, adult.CNhs10474.28-22B160.23
lung, embryo E12.CNhs10522.354-16G252.87
lung, embryo E14.CNhs10604.404-26F866.16
lung, embryo E15.CNhs11020.432-17C566.37
lung, embryo E16.CNhs10998.458-17B661.25
lung, embryo E17.CNhs10605.480-44A668.68
lung, embryo E18.CNhs10583.1287-20I665.46
lung, neonate N00.CNhs11224.640-42C653.08
lung, neonate N06.CNhs11212.683-20E564.95
lung, neonate N07.CNhs11111.715-19A357.36
lung, neonate N10.CNhs11219.750-23E656.77
lung, neonate N20.CNhs11109.822-18A447.85
lung, neonate N25.CNhs11119.1359-25C743.69
lung, neonate N30.CNhs11133.1394-42H244.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A151.13
mammary gland, adult lactating day02.CNhs10480.595-22B653.11
mammary gland, adult pregnant day19.CNhs10476.588-5H270.09
medulla oblongata, adult.CNhs10477.17-12C273.21
medulla oblongata, neonate N30.CNhs11200.1396-42A374.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C742.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E157.11
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E361.18
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D769.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D865.28
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D968.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D468.01
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D566.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D672.73
olfactory brain, adult.CNhs10489.18-22I975.83
ovary, adult.CNhs10507.91-2I781.33
ovary, embryo E18.CNhs11040.505-44H756.98
ovary, neonate N00.CNhs11217.1299-22I468.74
oviduct, adult pregnant day01.CNhs10500.988-6G673.41
pancreas, adult.CNhs10486.34-16E494.25
pancreas, embryo E14.CNhs11012.405-44F453.90
pancreas, embryo E15.CNhs11042.1556-45F261.37
pancreas, embryo E16.CNhs11003.460-26E566.58
pancreas, embryo E17.CNhs10599.1558-45G358.47
pancreas, embryo E18.CNhs10580.1535-43I768.56
pancreas, neonate N00.CNhs11105.645-26G965.64
pancreas, neonate N01.CNhs11138.1531-43D773.80
pancreas, neonate N02.CNhs11139.1539-43D861.32
pancreas, neonate N16.CNhs11136.787-43B667.32
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H555.69
pituitary gland, adult.CNhs10493.21-1G873.19
pituitary gland, embryo E12.CNhs11018.346-16E671.12
pituitary gland, embryo E13.CNhs11009.370-44C750.19
pituitary gland, embryo E14.CNhs11037.398-44A549.08
pituitary gland, embryo E15.CNhs10592.427-16B968.81
pituitary gland, embryo E16.CNhs11036.449-43F656.19
pituitary gland, embryo E17.CNhs11039.1265-44F562.69
pituitary gland, neonate N00.CNhs11190.1308-22E963.63
placenta, adult pregnant day10.CNhs10472.539-13I788.00
placenta, adult pregnant day17.CNhs10464.577-18G3101.68
prostate, adult.CNhs10470.859-1F874.54
skin, adult.CNhs10492.30-1C392.50
skin, neonate N00.CNhs11124.650-25G481.38
skin, neonate N03.CNhs11215.662-22H371.77
skin, neonate N06.CNhs11097.693-20I556.22
skin, neonate N10.CNhs11108.762-6C464.18
small intestine, neonate N16.CNhs11114.790-21I149.55
spinal cord, adult.CNhs10505.24-13C970.46
spleen, adult.CNhs10465.25-2G270.57
spleen, embryo E16.CNhs11035.461-43C154.69
spleen, embryo E18.CNhs11011.1271-21F262.78
spleen, neonate N10.CNhs11116.752-24D158.58
spleen, neonate N20.CNhs11112.824-19H184.75
spleen, neonate N25.CNhs11099.1354-25G352.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C956.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D357.21
stomach, adult.CNhs10503.33-1H644.87
stomach, embryo E12.CNhs10588.356-43E363.43
stomach, embryo E15.CNhs10603.1252-16G874.21
stomach, embryo E16.CNhs11022.459-17D461.89
stomach, embryo E17.CNhs11006.1035-18D563.14
stomach, embryo E18.CNhs10999.1286-20C656.99
stomach, neonate N03.CNhs11193.1340-24B854.08
stomach, neonate N07.CNhs11210.718-18A955.05
stomach, neonate N25.CNhs11104.1355-25E434.03
stomach, neonate N30.CNhs11134.1386-42I143.42
submandibular gland, adult.CNhs10469.59-29C170.21
testis, adult.CNhs10504.57-7G536.64
testis, embryo E13.CNhs11031.389-23F570.87
testis, embryo E15.CNhs11034.443-27C558.57
testis, embryo E16.CNhs11033.470-26G564.56
testis, embryo E17.CNhs11029.486-18I552.70
testis, embryo E18.CNhs11027.503-18G570.79
testis, neonate N00.CNhs11189.1300-22B777.93
testis, neonate N07.CNhs11222.726-26I474.87
testis, neonate N10.CNhs11204.763-44D989.65
testis, neonate N20.CNhs11110.839-18H367.16
testis, neonate N30.CNhs11130.1391-42E251.27
thymus, adult.CNhs10471.38-12B575.84
thymus, embryo E14.CNhs11041.402-44I453.32
thymus, embryo E15.CNhs11005.430-45I264.30
thymus, embryo E16.CNhs11002.456-26C563.27
thymus, embryo E17.CNhs10581.478-18C163.91
thymus, embryo E18.CNhs10595.1273-19G466.56
thymus, neonate N02.CNhs11181.1541-43F855.89
thymus, neonate N03.CNhs11137.2104-43C762.32
thymus, neonate N06.CNhs11197.681-26C471.28
thymus, neonate N07.CNhs11211.713-19D362.57
thymus, neonate N10.CNhs11194.748-24E462.31
thymus, neonate N20.CNhs11186.820-7A278.75
thymus, neonate N25.CNhs11125.1362-25G765.14
thymus, neonate N30.CNhs11132.1393-42G267.67
tongue, adult.CNhs10499.32-1B458.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3104.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7126.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5117.69
urinary bladder, adult.CNhs10481.879-12E464.14
uterus, adult pregnant day19.CNhs10497.590-15F564.94
uterus, adult.CNhs10509.92-27E552.02
vagina, adult.CNhs10502.89-27D556.59
vesicular gland, adult.CNhs10491.51-27F8107.84
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A192.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A285.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A566.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A679.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A783.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A893.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A978.18
whole body, embryo E11.CNhs11014.324-5I853.04
whole body, embryo E12.CNhs10587.857-27C982.20
whole body, embryo E13.CNhs10512.372-23H264.54
whole body, embryo E14.5.CNhs10578.420-27D279.25
whole body, embryo E14.CNhs10519.395-14B161.42
whole body, embryo E16.CNhs10514.453-14F246.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G560.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G557.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G564.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G561.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G566.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G559.61
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G559.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G557.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G559.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G562.87
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G565.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G557.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.16
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G561.82
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G558.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G561.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G555.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G570.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G564.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G556.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G566.29
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G558.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G561.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G557.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G564.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G564.25
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G557.79
whole body, embryo E17.5.CNhs10513.490-9F974.65
whole body, embryo E17.CNhs10517.475-3I557.21
whole body, embryo E18.CNhs10516.493-3B359.42
whole body, neonate N00.CNhs10525.657-19C261.02
whole body, neonate N01.CNhs10576.659-23C665.99
whole body, neonate N06.CNhs10515.692-21D156.03
whole body, neonate N10.CNhs10518.761-6B451.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.52e-0954
brain5.10e-0947
future brain5.10e-0947
brain grey matter7.83e-0929
regional part of telencephalon7.83e-0929
telencephalon7.83e-0929
anterior neural tube7.90e-0940
regional part of brain1.04e-0846
neural tube1.78e-0852
neural rod1.78e-0852
future spinal cord1.78e-0852
neural keel1.78e-0852
pre-chordal neural plate1.88e-0849
regional part of forebrain2.21e-0839
forebrain2.21e-0839
future forebrain2.21e-0839
gray matter4.61e-0834
central nervous system4.77e-0873
neurectoderm7.26e-0864
neural plate7.26e-0864
presumptive neural plate7.26e-0864
ectoderm-derived structure7.58e-0895
ectoderm7.58e-0895
presumptive ectoderm7.58e-0895
ecto-epithelium1.24e-0773
nervous system4.03e-0775
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