FFCP PHASE1:Mm9::chr12:77923452..77923495,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:77923452..77923495,-
|short_description=p1@Rab15
|description=CAGE_peak_1_at_Rab15_5end
|association_with_transcript=-3bp_to_ENSMUST00000134124_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=104886 | |EntrezGene=104886 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENSMUST00000134124_5end | |||
|cluster_id=chr12:77923452..77923495,- | |||
|description=CAGE_peak_1_at_Rab15_5end | |||
|id=chr12:77923452..77923495,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.16e-16!63;UBERON:0004121!2.18e-16!102;UBERON:0000924!2.18e-16!102;UBERON:0006601!2.18e-16!102;UBERON:0001049!3.40e-14!52;UBERON:0005068!3.40e-14!52;UBERON:0006241!3.40e-14!52;UBERON:0007135!3.40e-14!52;UBERON:0000955!1.57e-13!50;UBERON:0006238!1.57e-13!50;UBERON:0001017!2.08e-13!73;UBERON:0005743!2.08e-13!73;UBERON:0000073!2.73e-13!75;UBERON:0001016!2.73e-13!75;UBERON:0002616!4.00e-13!49;UBERON:0002346!1.59e-12!71;UBERON:0003075!1.59e-12!71;UBERON:0007284!1.59e-12!71;UBERON:0003056!2.07e-11!49;UBERON:0007811!3.49e-10!86;UBERON:0003080!3.50e-10!40;UBERON:0002020!5.96e-10!34;UBERON:0000153!8.22e-10!94;UBERON:0002780!1.05e-09!39;UBERON:0001890!1.05e-09!39;UBERON:0006240!1.05e-09!39;UBERON:0002791!6.26e-08!29;UBERON:0003528!6.26e-08!29;UBERON:0001893!6.26e-08!29;UBERON:0002021!6.82e-08!10;UBERON:0000411!6.82e-08!10;UBERON:0001950!6.82e-08!10;UBERON:0007023!8.10e-08!51;UBERON:0000064!3.02e-07!99;UBERON:0000468!8.52e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.66e-18,95;UBERON:0000924,3.66e-18,95;UBERON:0006601,3.66e-18,95;UBERON:0010371,4.90e-17,73;UBERON:0000073,6.03e-15,54;UBERON:0002346,1.71e-14,64;UBERON:0003075,1.71e-14,64;UBERON:0007284,1.71e-14,64;UBERON:0001049,8.00e-14,52;UBERON:0005068,8.00e-14,52;UBERON:0006241,8.00e-14,52;UBERON:0007135,8.00e-14,52;UBERON:0001017,4.16e-13,73;UBERON:0001016,5.39e-13,75;UBERON:0000955,1.16e-11,47;UBERON:0006238,1.16e-11,47;UBERON:0002616,2.88e-11,46;UBERON:0003056,3.18e-11,49;UBERON:0003080,5.67e-10,40;UBERON:0002020,1.01e-09,34;UBERON:0002780,1.69e-09,39;UBERON:0001890,1.69e-09,39;UBERON:0006240,1.69e-09,39;UBERON:0011216,1.27e-08,194;UBERON:0007023,3.89e-08,51;UBERON:0002021,5.74e-08,10;UBERON:0000411,5.74e-08,10;UBERON:0001950,5.74e-08,10;UBERON:0003528,1.07e-07,29;UBERON:0002791,1.07e-07,29;UBERON:0001893,1.07e-07,29 | |||
|phase1_expression=26.424559772291,2.09385244583617,2.72999543633722,1.20985684522732,1.00179145989269,44.8237656004746,52.3292314933977,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,13.5218831340201,0,0,16.6392119705143,15.1410125504332,9.18771142584032,13.3536218809313,15.9448712187558,16.1519906537918,14.1136872665561,44.5678326417162,0,0,0,12.7094712690561,14.4624141461888,7.35009682544529,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0,14.0830441982647,0.872100625521786,0.878744730937887,0.58328969722285,4.75953833526233,1.43752564364972,0,0,0,1.80081605225163,1.14613375975503,2.57836046138721,18.0061650165042,26.4495489636016,22.1840991227163,7.45457970552091,11.5608323494448,0.899899717281399,1.97773272513395,1.4209602298922,4.19440154725767,1.53687322128622,2.90330914463737,3.78016627328734,2.73422449756797,32.8498632064374,26.7250934551452,6.1245399607477,4.60058260887535,6.43453150627015,31.9336054898227,35.2417053115118,37.9408137142921,18.7278528576875,18.2975287204819,18.2319679694866,37.1313388671837,32.0774687718058,44.1586936074981,31.8198872311561,24.915044139843,15.2847545576746,4.08921443999194,10.9578762154839,0,0,0.679971333707751,0,0,0,8.42666520790511,0,0,0,25.3518155598025,0,0,0,25.7624338803345,22.5490280272838,24.2651733607096,8.44960709921044,0,1.92974780784272,3.99016251562112,4.26251669636998,4.61230994512117,3.76806601381556,5.05631440683531,1.25666591329675,31.8881508377342,0.578397427679647,0,8.41187619726528,1.76673214768315,2.42437626567611,14.9113408974498,32.2058876712702,31.6264527288317,11.4955674843866,0,0,0.127070227073065,33.5531032266803,58.5600771607842,17.2146462394624,81.3497818499854,98.7061665295076,37.6096360652804,52.890651760089,8.55450656342657,3.23458123586242,4.29628689337247,29.2514179682199,11.3204785377552,12.644615743841,16.3856538122868,10.7000420663358,8.64063539221864,8.58361925908494,9.0890672822937,11.3829483125167,4.31135985865684,6.05139456537022,10.7330185740009,11.3981780862339,11.9560317167007,7.3132954969655,7.61393904709391,4.17971960318836,0,0,0.284163499395593,1.24275463521301,3.28336483973535,1.44049649168812,2.13070262026689,1.57411385397923,1.23413690309903,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.536825675041487,59.0914755465198,12.7601719350313,6.93879444265976,12.164726066523,4.47905326123991,5.34144345279009,10.5671318284117,4.84040459096022,8.89512175379481,9.70150693174052,11.3886974770683,10.0466362381647,9.0480675168097,9.54991065797524,10.7230247915516,9.88701349519644,14.0489732418551,14.1390304010601,4.55202962287396,4.56994050438915,3.38123207019241,2.64746726198909,5.04276466635827,4.83937157243198,4.55303067294652,1.91893192373483,3.61097074035162,4.07210640941942,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,8.86815312799702,7.39016505904891,13.5260930446881,10.863685489612,15.2548661387526,14.2380318825543,13.8065311713888,16.3912264200551,11.1920952315396,11.5161638617363,8.13219320153184,9.34020893879707,12.0879487306127,12.0058718622655,1.50791283939272,0,66.3881768575699,46.9092468718045,31.9495674075706,29.420133334643,0,3.02965112645248,5.04813151066011,7.02789739733949,5.17016154558717,2.38968797952552,1.11399337041197,2.26461224631066,3.64329631507405,6.72188473196017,5.92931666919785,23.1351347823701,2.12910127812403,7.12262414669021,6.51547837414304,10.5580878702423,0,8.01176099311439,3.93020624054176,3.58349651536206,2.95301892880773,1.22974059177571,3.10113951801865,1.09060118843252,4.27796854061666,0.316036757935816,0,0,5.7874732978144,15.3051929926614,19.0157265160649,17.1469628025274,10.1083933176096,9.81028496811388,10.5311373185357,8.52501857520878,25.5792161789444,113.541989983008,86.2266036394901,11.8718102117866,5.32832608096488,8.68506118965444,11.1016279922917,17.2347944732314,10.2018292820448,24.6615651673978,1.19609616558497,1.65109494370578,1.29636169158798,0.376736914009382,0.820165366326151,0.915112692826091,0.339956859987711,0.279902904647316,0.552799895217695,13.3653886522116,7.90839983952838,11.9958485604841,18.5769186213498,16.7270636811575,15.2853794622324,11.1937407499401,10.083721598491,7.0674104335688,22.553005352772,82.0167893274742,0,0.897099276263873,2.15096037594227,2.33341426012857,2.0665571756437,2.02747350588934,2.34714477291508,1.5624526181274,0.104859344425711,0.241584120826006,0,8.21628913633263,41.3559439191935,28.2455132203275,14.8109738194686,10.9206284357164,8.14593554603186,8.41368146639782,8.27061352177632,4.94735604745923,5.25826965919499,6.04957110821043,7.30934105548143,4.2333210321745,6.66198342434943,14.2840141677583,33.2978930061097,5.74168682300644,24.1753847564273,58.3432573977215,3.75364950902364,5.49454872801795,15.00578653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|phase1_expression=26.424559772291,2.09385244583617,2.72999543633722,1.20985684522732,1.00179145989269,44.8237656004746,52.3292314933977,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,13.5218831340201,0,0,16.6392119705143,15.1410125504332,9.18771142584032,13.3536218809313,15.9448712187558,16.1519906537918,14.1136872665561,44.5678326417162,0,0,0,12.7094712690561,14.4624141461888,7.35009682544529,0.418531630736908,0,0,0,0.683045484958446,0,0.125896817975577,0.202753862439029,0,14.0830441982647,0.872100625521786,0.878744730937887,0.58328969722285,4.75953833526233,1.43752564364972,0,0,0,1.80081605225163,1.14613375975503,2.57836046138721,18.0061650165042,26.4495489636016,22.1840991227163,7.45457970552091,11.5608323494448,0.899899717281399,1.97773272513395,1.4209602298922,4.19440154725767,1.53687322128622,2.90330914463737,3.78016627328734,2.73422449756797,32.8498632064374,26.7250934551452,6.1245399607477,4.60058260887535,6.43453150627015,31.9336054898227,35.2417053115118,37.9408137142921,18.7278528576875,18.2975287204819,18.2319679694866,37.1313388671837,32.0774687718058,44.1586936074981,31.8198872311561,24.915044139843,15.2847545576746,4.08921443999194,10.9578762154839,0,0,0.679971333707751,0,0,0,8.42666520790511,0,0,0,25.3518155598025,0,0,0,25.7624338803345,22.5490280272838,24.2651733607096,8.44960709921044,0,1.92974780784272,3.99016251562112,4.26251669636998,4.61230994512117,3.76806601381556,5.05631440683531,1.25666591329675,31.8881508377342,0.578397427679647,0,8.41187619726528,1.76673214768315,2.42437626567611,14.9113408974498,32.2058876712702,31.6264527288317,11.4955674843866,0,0,0.127070227073065,33.5531032266803,58.5600771607842,17.2146462394624,81.3497818499854,98.7061665295076,37.6096360652804,52.890651760089,8.55450656342657,3.23458123586242,4.29628689337247,29.2514179682199,11.3204785377552,12.644615743841,16.3856538122868,10.7000420663358,8.64063539221864,8.58361925908494,9.0890672822937,11.3829483125167,4.31135985865684,6.05139456537022,10.7330185740009,11.3981780862339,11.9560317167007,7.3132954969655,7.61393904709391,4.17971960318836,0,0,0.284163499395593,1.24275463521301,3.28336483973535,1.44049649168812,2.13070262026689,1.57411385397923,1.23413690309903,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,0.820837320395476,0.810688095458557,0.292399974850665,1.09775057645525,0.536825675041487,59.0914755465198,12.7601719350313,6.93879444265976,12.164726066523,4.47905326123991,5.34144345279009,10.5671318284117,4.84040459096022,8.89512175379481,9.70150693174052,11.3886974770683,10.0466362381647,9.0480675168097,9.54991065797524,10.7230247915516,9.88701349519644,14.0489732418551,14.1390304010601,4.55202962287396,4.56994050438915,3.38123207019241,2.64746726198909,5.04276466635827,4.83937157243198,4.55303067294652,1.91893192373483,3.61097074035162,4.07210640941942,0,0.333690211432188,0.786235980452812,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,8.86815312799702,7.39016505904891,13.5260930446881,10.863685489612,15.2548661387526,14.2380318825543,13.8065311713888,16.3912264200551,11.1920952315396,11.5161638617363,8.13219320153184,9.34020893879707,12.0879487306127,12.0058718622655,1.50791283939272,0,66.3881768575699,46.9092468718045,31.9495674075706,29.420133334643,0,3.02965112645248,5.04813151066011,7.02789739733949,5.17016154558717,2.38968797952552,1.11399337041197,2.26461224631066,3.64329631507405,6.72188473196017,5.92931666919785,23.1351347823701,2.12910127812403,7.12262414669021,6.51547837414304,10.5580878702423,0,8.01176099311439,3.93020624054176,3.58349651536206,2.95301892880773,1.22974059177571,3.10113951801865,1.09060118843252,4.27796854061666,0.316036757935816,0,0,5.7874732978144,15.3051929926614,19.0157265160649,17.1469628025274,10.1083933176096,9.81028496811388,10.5311373185357,8.52501857520878,25.5792161789444,113.541989983008,86.2266036394901,11.8718102117866,5.32832608096488,8.68506118965444,11.1016279922917,17.2347944732314,10.2018292820448,24.6615651673978,1.19609616558497,1.65109494370578,1.29636169158798,0.376736914009382,0.820165366326151,0.915112692826091,0.339956859987711,0.279902904647316,0.552799895217695,13.3653886522116,7.90839983952838,11.9958485604841,18.5769186213498,16.7270636811575,15.2853794622324,11.1937407499401,10.083721598491,7.0674104335688,22.553005352772,82.0167893274742,0,0.897099276263873,2.15096037594227,2.33341426012857,2.0665571756437,2.02747350588934,2.34714477291508,1.5624526181274,0.104859344425711,0.241584120826006,0,8.21628913633263,41.3559439191935,28.2455132203275,14.8109738194686,10.9206284357164,8.14593554603186,8.41368146639782,8.27061352177632,4.94735604745923,5.25826965919499,6.04957110821043,7.30934105548143,4.2333210321745,6.66198342434943,14.2840141677583,33.2978930061097,5.74168682300644,24.1753847564273,58.3432573977215,3.75364950902364,5.49454872801795,15.00578653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| ||
|short_description=p1@Rab15 | |||
}} | }} |
Latest revision as of 19:40, 26 September 2015
Short description: | p1@Rab15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab15_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENSMUST00000134124_5end |
EntrezGene: | Rab15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.66e-18 | 95 |
ectoderm | 3.66e-18 | 95 |
presumptive ectoderm | 3.66e-18 | 95 |
ecto-epithelium | 4.90e-17 | 73 |
regional part of nervous system | 6.03e-15 | 54 |
neurectoderm | 1.71e-14 | 64 |
neural plate | 1.71e-14 | 64 |
presumptive neural plate | 1.71e-14 | 64 |
neural tube | 8.00e-14 | 52 |
neural rod | 8.00e-14 | 52 |
future spinal cord | 8.00e-14 | 52 |
neural keel | 8.00e-14 | 52 |
central nervous system | 4.16e-13 | 73 |
nervous system | 5.39e-13 | 75 |
brain | 1.16e-11 | 47 |
future brain | 1.16e-11 | 47 |
regional part of brain | 2.88e-11 | 46 |
pre-chordal neural plate | 3.18e-11 | 49 |
anterior neural tube | 5.67e-10 | 40 |
gray matter | 1.01e-09 | 34 |
regional part of forebrain | 1.69e-09 | 39 |
forebrain | 1.69e-09 | 39 |
future forebrain | 1.69e-09 | 39 |
organ system subdivision | 1.27e-08 | 194 |
adult organism | 3.89e-08 | 51 |
occipital lobe | 5.74e-08 | 10 |
visual cortex | 5.74e-08 | 10 |
neocortex | 5.74e-08 | 10 |
brain grey matter | 1.07e-07 | 29 |
regional part of telencephalon | 1.07e-07 | 29 |
telencephalon | 1.07e-07 | 29 |