FF:10013-101C4: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004902 | |DRA_sample_Accession=CAGE@SAMD00004902 | ||
|accession_numbers=CAGE;DRX008636;DRR009508;DRZ000933;DRZ002318 | |accession_numbers=CAGE;DRX008636;DRR009508;DRZ000933;DRZ002318;DRZ012283;DRZ013668 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000002,UBERON:0000995,UBERON:0003134,UBERON:0000479,UBERON:0001560,UBERON:0005156,UBERON:0000064,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000002,UBERON:0000995,UBERON:0003134,UBERON:0000479,UBERON:0001560,UBERON:0005156,UBERON:0000064,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr4:174451370..174451387,-!p1@HAND2!1.93!83.26!HAND2;;chr4:57547454..57547469,-!p1@HOPX!1.92!81.57!HOPX;;chr6:152128810..152128827,+!p2@ESR1!1.90!79.26!ESR1;;chr19:46801639..46801699,+!p1@HIF3A!1.90!77.72!HIF3A;;chr11:34642612..34642646,+!p1@EHF!1.88!74.03!EHF;;chr6:152126790..152126828,+!p3@ESR1!1.82!64.41!ESR1;;chr6:152126830..152126847,+!p4@ESR1!1.80!62.33!ESR1;;chr20:62680984..62680999,-!p1@SOX18!1.78!78.03!SOX18;;chr10:119302232..119302265,+!p1@EMX2!1.78!59.71!EMX2;;chr17:80797886..80797906,-!p1@ZNF750!1.71!49.86!ZNF750;;chr6:134210243..134210257,+!p1@TCF21!1.70!48.86!TCF21;;chr21:39870339..39870443,-!p1@ERG!1.67!45.79!ERG;;chr7:27239703..27239715,-!p1@HOXA13!1.65!43.32!HOXA13;;chr8:55370487..55370503,+!p1@SOX17!1.64!42.78!SOX17;;chr11:101000537..101000553,-!p1@PGR!1.64!42.48!PGR;;chr1:40105299..40105326,-!p1@HEYL!1.63!41.55!HEYL;;chr11:113930425..113930471,+!p1@ZBTB16!1.58!52.10!ZBTB16;;chr7:27224842..27224872,-!p1@HOXA11!1.57!36.17!HOXA11;;chr1:170632285..170632309,+!p1@PRRX1!1.56!39.48!PRRX1;;chr11:100999775..100999800,-!p2@PGR!1.56!35.40!PGR;;chr3:128212033..128212051,-!p1@GATA2!1.56!35.40!GATA2;;chr5:134369879..134369898,-!p2@PITX1!1.55!34.55!PITX1;;chr1:164528410..164528428,+!p1@PBX1!1.53!237.70!PBX1;;chrX:66763856..66763896,+!p1@AR!1.53!46.71!AR;;chr1:170633058..170633084,+!p5@PRRX1!1.51!31.24!PRRX1;;chr7:27224795..27224840,-!p2@HOXA11!1.51!31.16!HOXA11;;chr1:170633348..170633399,+!p2@PRRX1!1.50!40.94!PRRX1;;chr17:38256799..38256815,-!p3@NR1D1!1.49!53.10!NR1D1;;chr17:53342311..53342400,+!p1@HLF!1.48!33.01!HLF;;chr2:27371879..27371907,+!p1@TCF23!1.48!29.24!TCF23;;chr7:27239740..27239759,-!p2@HOXA13!1.45!27.09!HOXA13;;chr8:99956662..99956684,+!p1@OSR2!1.44!40.71!OSR2;;chr1:201979743..201979762,+!p1@ELF3!1.44!26.39!ELF3;;chr17:38256822..38256851,-!p1@NR1D1!1.43!194.99!NR1D1;;chr7:27213893..27213954,-!p1@HOXA10!1.43!26.09!HOXA10;;chr7:44143925..44143970,+!p1@AEBP1!1.42!539.96!AEBP1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.41!24.85!PEG3;;chr15:96873984..96873999,+!p3@NR2F2!1.40!172.52!NR2F2;;chr4:81118647..81118666,+!p1@PRDM8!1.40!31.70!PRDM8;;chr22:41763452..41763466,+!p2@TEF!1.40!24.24!TEF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.40!23.85!ZBED1;;chr5:92919100..92919135,+!p3@NR2F1!1.39!28.47!NR2F1;;chr12:52437488..52437507,+!p2@NR4A1!1.37!22.55!NR4A1;;chr6:152128782..152128803,+!p5@ESR1!1.36!22.01!ESR1;;chr3:69788576..69788648,+!p1@MITF!1.35!110.96!MITF;;chr20:55204351..55204377,+!p1@TFAP2C!1.35!26.78!TFAP2C;;chr16:79634624..79634642,-!p1@MAF!1.34!80.41!MAF;;chr2:66662249..66662267,+!p2@MEIS1!1.34!78.10!MEIS1;;chr9:77112244..77112262,+!p1@RORB!1.33!22.78!RORB;;chr11:32457075..32457095,-!p1@WT1!1.33!20.55!WT1;;chr16:79634595..79634620,-!p2@MAF!1.32!36.09!MAF;;chr6:152011654..152011682,+!p1@ESR1!1.32!19.78!ESR1;;chr9:114287433..114287513,+!p1@ZNF483!1.31!50.17!ZNF483;;chr18:53068911..53068935,-!p4@TCF4!1.31!21.85!TCF4;;chr1:170632959..170632987,+!p4@PRRX1!1.31!21.16!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!1.31!19.47!SOX7;;chr15:96874012..96874042,+!p2@NR2F2!1.30!164.21!NR2F2;;chr3:189507432..189507459,+!p1@TP63!1.30!19.01!TP63;;chr15:101069113..101069169,-!p1@CERS3!1.30!18.85!CERS3;;chr6:34524093..34524135,-!p1@SPDEF!1.30!18.85!SPDEF;;chr7:63505799..63505904,+!p1@ZNF727!1.29!18.70!ZNF727;;chr16:51185172..51185197,-!p1@SALL1!1.29!18.70!SALL1;;chr2:145277882..145277967,-!p3@ZEB2!1.28!31.16!ZEB2;;chr7:27192185..27192209,-!p1@HOXA3!1.28!18.01!HOXA3;;chr5:92918919..92918942,+!p1@NR2F1!1.27!77.64!NR2F1;;chr20:51588873..51588953,+!p1@TSHZ2!1.27!23.39!TSHZ2;;chr11:100999802..100999819,-!p4@PGR!1.27!17.47!PGR;;chr6:391743..391759,+!p1@IRF4!1.26!17.39!IRF4;;chr4:174450089..174450153,-!p2@HAND2!1.26!17.31!HAND2;;chr11:101000524..101000535,-!p3@PGR!1.25!16.93!PGR;;chr10:119302268..119302282,+!p4@EMX2!1.25!16.70!EMX2;;chr5:71803177..71803255,-!p1@ZNF366!1.25!16.62!ZNF366;;chr5:134369905..134369972,-!p1@PITX1!1.24!25.09!PITX1;;chr16:79633894..79633954,-!p3@MAF!1.23!30.93!MAF;;chr1:164528942..164528964,+!p11@PBX1!1.23!16.08!PBX1;;chr1:201979703..201979721,+!p2@ELF3!1.23!16.08!ELF3;;chr2:66662281..66662308,+!p1@MEIS1!1.22!53.71!MEIS1;;chr2:19558373..19558392,-!p1@OSR1!1.22!42.17!OSR1;;chr17:7492684..7492778,-!p2@SOX15!1.22!32.78!SOX15;;chr13:72441315..72441454,-!p1@DACH1!1.22!30.93!DACH1;;chr11:113930291..113930339,+!p2@ZBTB16!1.21!24.85!ZBTB16;;chr7:44143978..44143989,+!p2@AEBP1!1.20!26.93!AEBP1;;chr1:170633262..170633285,+!p3@PRRX1!1.20!17.16!PRRX1;;chr1:164528445..164528459,+!p2@PBX1!1.19!45.09!PBX1;;chr1:164528911..164528940,+!p7@PBX1!1.19!21.78!PBX1;;chr22:38380543..38380569,-!p1@SOX10!1.19!14.54!SOX10;;chr10:119302508..119302559,+!p5@EMX2!1.19!14.31!EMX2;;chr12:52445218..52445237,+!p1@NR4A1!1.18!176.29!NR4A1;;chr11:113930401..113930422,+!p3@ZBTB16!1.18!14.24!ZBTB16;;chr11:129245526..129245553,+!p1@BARX2!1.18!14.24!BARX2;;chr7:27205136..27205164,-!p1@HOXA9!1.18!14.16!HOXA9;;chr6:126070769..126070801,+!p1@HEY2!1.17!15.70!HEY2;;chr9:16575347..16575359,-!p12@BNC2!1.17!13.85!BNC2;;chr3:128206762..128206781,-!p2@GATA2!1.16!83.72!GATA2;;chr2:239756671..239756732,+!p1@TWIST2!1.16!42.63!TWIST2;;chr12:24715376..24715432,-!p1@SOX5!1.16!17.24!SOX5;;chr3:138665937..138665968,-!p1@FOXL2!1.16!13.47!FOXL2;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!46.79!BHLHE41;;chr4:4861385..4861398,+!p1@MSX1!1.15!38.94!MSX1;;chr4:174451350..174451363,-!p3@HAND2!1.15!13.24!HAND2;;chr2:27371919..27371935,+!p2@TCF23!1.15!13.16!TCF23;;chr2:176969228..176969260,+!p1@HOXD11!1.15!13.08!HOXD11;;chr6:19837592..19837621,+!p1@ID4!1.14!77.64!ID4;;chr3:114819124..114819200,-!p3@ZBTB20!1.14!29.47!ZBTB20;;chr6:1312325..1312340,+!p1@FOXQ1!1.13!20.39!FOXQ1;;chr16:86544113..86544145,+!p1@FOXF1!1.13!15.70!FOXF1;;chr5:50679228..50679288,+!p1@ISL1!1.13!12.47!ISL1;;chr3:169381420..169381535,-!p1@MECOM!1.12!14.39!MECOM;;chr18:52989031..52989079,-!p2@TCF4!1.11!28.32!TCF4;;chr11:34642656..34642667,+!p2@EHF!1.11!11.85!EHF;;chr19:45971246..45971265,+!p1@FOSB!1.10!214.31!FOSB;;chr1:164528384..164528409,+!p3@PBX1!1.10!36.09!PBX1;;chr12:26277817..26277863,-!p2@BHLHE41!1.10!15.77!BHLHE41;;chr2:122042770..122042785,-!p1@TFCP2L1!1.10!11.62!TFCP2L1;;chr5:88178983..88179012,-!p1@MEF2C!1.09!87.26!MEF2C;;chr15:96869255..96869291,+!p6@NR2F2!1.09!20.62!NR2F2;;chr15:42749722..42749739,-!p2@ZFP106!1.09!20.31!ZFP106;;chr15:57511609..57511651,+!p2@TCF12!1.09!19.08!TCF12;;chr7:44143997..44144008,+!p3@AEBP1!1.09!14.47!AEBP1;;chr1:209979467..209979494,-!p1@IRF6!1.09!12.62!IRF6;;chr5:158526917..158526932,-!p1@EBF1!1.07!26.93!EBF1;;chr17:53344980..53345011,+!p3@HLF!1.07!10.85!HLF;;chr1:24645921..24645973,+!p2@GRHL3!1.07!10.62!GRHL3;;chr8:106330656..106330684,+!p1@ZFPM2!1.06!27.63!ZFPM2;;chr15:37390850..37390909,-!p3@MEIS2!1.06!20.78!MEIS2;;chr20:50179368..50179392,-!p2@NFATC2!1.06!13.54!NFATC2;;chr14:75745523..75745537,+!p1@FOS!1.05!1244.75!FOS;;chr11:47400078..47400106,-!p1@SPI1!1.05!10.23!SPI1;;chr10:77161533..77161546,-!p2@ZNF503!1.04!39.86!ZNF503;;chr1:61548374..61548415,+!p4@NFIA!1.04!18.70!NFIA;;chr20:2673383..2673441,+!p1@EBF4!1.04!15.85!EBF4;;chr2:177001290..177001315,+!p1@HOXD3!1.04!9.93!HOXD3;;chrX:66763914..66763933,+!p3@AR!1.04!9.85!AR;;chr10:77161504..77161530,-!p1@ZNF503!1.03!130.35!ZNF503;;chr1:61548069..61548102,+!p3@NFIA!1.03!23.62!NFIA;;chr1:164528616..164528660,+!p5@PBX1!1.03!20.16!PBX1;;chr10:119302182..119302196,+!p6@EMX2!1.03!9.77!EMX2;;chr1:204042233..204042249,+!p1@SOX13!1.02!61.10!SOX13;;chr1:164528340..164528379,+!p4@PBX1!1.02!23.78!PBX1;;chr2:166326200..166326216,+!p1@CSRNP3!1.02!14.16!CSRNP3;;chr2:176994408..176994492,+!p1@HOXD8!1.02!9.39!HOXD8;;chr11:32457413..32457431,-!p2@WT1!1.02!9.39!WT1;;chr3:141150883..141150961,+!p6@ZBTB38!1.01!9.31!ZBTB38;;chr17:59477233..59477263,+!p1@TBX2!1.00!28.47!TBX2;;chrX:66763815..66763854,+!p2@AR!1.00!12.00!AR;;chr8:93107451..93107468,-!p2@RUNX1T1!1.00!9.00!RUNX1T1;;chr15:96873921..96873946,+!p1@NR2F2!0.99!251.09!NR2F2;;chr5:158526459..158526481,-!p2@EBF1!0.99!11.93!EBF1;;chr3:126076242..126076257,-!p1@KLF15!0.99!11.08!KLF15;;chr5:92919068..92919082,+!p5@NR2F1!0.99!10.62!NR2F1;;chr7:42276787..42276815,-!p1@GLI3!0.98!23.32!GLI3;;chr10:119303078..119303169,+!p2@EMX2!0.98!8.62!EMX2;;chr11:101000445..101000465,-!p5@PGR!0.98!8.46!PGR;;chr19:46800289..46800327,+!p2@HIF3A!0.98!8.46!HIF3A;;chr17:53344945..53344977,+!p2@HLF!0.98!8.46!HLF;;chr13:41240737..41240787,-!p1@FOXO1!0.97!101.11!FOXO1;;chr13:73633131..73633149,+!p1@KLF5!0.97!90.80!KLF5;;chr3:114866084..114866118,-!p2@ZBTB20!0.97!31.32!ZBTB20;;chr17:1959369..1959388,+!p2@HIC1!0.97!22.62!HIC1;;chr20:30433396..30433414,-!p1@FOXS1!0.97!8.31!FOXS1;;chr2:176969179..176969226,+!p2@HOXD11!0.97!8.23!HOXD11;;chr9:110252035..110252057,-!p1@KLF4!0.96!133.12!KLF4;;chr5:92918894..92918912,+!p2@NR2F1!0.96!27.09!NR2F1;;chr17:38256877..38256900,-!p2@NR1D1!0.96!26.86!NR1D1;;chr15:96869222..96869251,+!p18@NR2F2!0.96!9.54!NR2F2;;chr18:45663490..45663528,-!p2@ZBTB7C!0.96!8.08!ZBTB7C;;chr1:61547894..61547968,+!p2@NFIA!0.94!23.39!NFIA;;chr7:15726296..15726315,-!p1@MEOX2!0.94!7.77!MEOX2;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.62!HOXB6;;chr15:37392724..37392757,-!p1@MEIS2!0.93!35.86!MEIS2;;chr12:96588368..96588394,+!p3@ELK3!0.93!20.78!ELK3;;chr19:13134772..13134822,+!p2@NFIX!0.93!11.39!NFIX;;chr2:176981499..176981522,+!p2@HOXD10!0.92!7.39!HOXD10;;chr7:96654133..96654150,-!p1@DLX5!0.92!7.23!DLX5;;chr12:115121962..115121987,-!p1@TBX3!0.90!61.64!TBX3;;chr11:46299199..46299233,+!p1@CREB3L1!0.90!37.63!CREB3L1;;chr7:113726357..113726443,+!p1@FOXP2!0.90!12.39!FOXP2;;chr18:52989081..52989117,-!p7@TCF4!0.90!10.93!TCF4;;chr19:38085768..38085821,+!p1@ZNF540!0.90!10.70!ZNF540;;chr17:38256590..38256599,-!p8@NR1D1!0.90!7.00!NR1D1;;chr10:119302645..119302712,+!p3@EMX2!0.90!7.00!EMX2;;chr2:176969097..176969109,+!p3@HOXD11!0.90!6.93!HOXD11;;chr20:39317868..39317884,-!p1@MAFB!0.89!84.26!MAFB;;chr18:42260920..42260951,+!p4@SETBP1!0.89!6.85!SETBP1;;chr1:164529004..164529015,+!p15@PBX1!0.89!6.77!PBX1;;chr3:25470156..25470227,+!p2@RARB!0.89!6.69!RARB;;chr19:16435625..16435682,+!p1@K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ERE!0.42!3.15!RERE;;chr18:53257068..53257086,-!p12@TCF4!0.42!2.54!TCF4;;chr5:88179518..88179569,-!p5@MEF2C!0.42!2.39!MEF2C;;chr3:168865194..168865245,-!p3@MECOM!0.42!2.39!MECOM;;chr4:103422232..103422241,+!p6@NFKB1!0.42!2.15!NFKB1;;chr18:72922858..72922897,+!p4@TSHZ1!0.42!2.08!TSHZ1;;chr6:41514178..41514192,+!p4@FOXP4!0.42!2.00!FOXP4;;chr5:134369848..134369853,-!p6@PITX1!0.42!1.62!PITX1;;chr6:10415484..10415508,-!p3@TFAP2A!0.42!1.62!TFAP2A;;chr6:126070748..126070768,+!p2@HEY2!0.42!1.62!HEY2;;chr6:152128371..152128382,+!p14@ESR1!0.42!1.62!ESR1;;chr7:27170359..27170381,-!p1@HOXA4!0.42!1.62!HOXA4;;chr8:93107827..93107845,-!p20@RUNX1T1!0.42!1.62!RUNX1T1;;chr2:171571827..171571853,+!p1@SP5!0.42!1.62!SP5;;chr2:177001268..177001287,+!p3@HOXD3!0.42!1.62!HOXD3;;chr2:238592039..238592054,+!p4@LRRFIP1!0.42!1.62!LRRFIP1;;chr3:27763807..27763822,-!p1@EOMES!0.42!1.62!EOMES;;chr4:109090075..109090095,-!p2@LEF1!0.42!1.62!LEF1;;chr10:64018918..64018936,+!p2@ZNF365!0.42!1.62!ZNF365;;chr1:165414325..165414369,-!p1@RXRG!0.42!1.62!RXRG;;chr17:46667628..46667642,-!p2@HOXB3!0.42!1.62!HOXB3;;chr18:53068940..53068951,-!p21@TCF4!0.42!1.62!TCF4;;chrX:24167086..24167111,+!p4@ZFX!0.42!1.62!ZFX;;chr3:5021113..5021180,+!p1@BHLHE40!0.41!164.60!BHLHE40;;chr11:10879593..10879620,-!p1@ZBED5!0.41!72.49!ZBED5;;chr11:118307179..118307223,+!p1@MLL!0.41!71.64!MLL;;chr7:137686791..137686821,-!p1@CREB3L2!0.41!67.56!CREB3L2;;chr8:124286495..124286548,-!p1@ZHX1!0.41!22.32!ZHX1;;chr1:167190091..167190156,+!p1@POU2F1!0.41!17.70!POU2F1;;chr2:174828892..174828972,-!p2@SP3!0.41!16.39!SP3;;chr22:24093267..24093327,-!p1@ZNF70!0.41!15.24!ZNF70;;chr9:4300050..4300118,-!p1@GLIS3!0.41!14.54!GLIS3;;chr19:52511437..52511490,-!p1@ZNF615!0.41!13.16!ZNF615;;chr8:28243661..28243709,-!p1@ZNF395!0.41!12.93!ZNF395;;chr4:140005341..140005411,-!p3@ELF2!0.41!11.77!ELF2;;chr6:41703296..41703367,-!p1@TFEB!0.41!11.23!TFEB;;chr2:60780753..60780800,-!p1@BCL11A!0.41!10.85!BCL11A;;chr19:11959532..11959593,+!p1@ZNF439!0.41!8.23!ZNF439;;chr19:53696587..53696633,-!p1@ZNF665!0.41!8.08!ZNF665;;chr6:28411241..28411284,-!p1@ZSCAN23!0.41!6.62!ZSCAN23;;chr10:97890024..97890064,+!p2@ZNF518A!0.41!5.62!ZNF518A;;chr7:19157043..19157088,-!p2@TWIST1!0.41!5.16!TWIST1;;chr12:10875658..10875708,-!p2@CSDA!0.41!4.69!CSDA;;chr17:38256973..38256990,-!p5@NR1D1!0.41!4.62!NR1D1;;chr15:41913412..41913456,+!p3@MGA!0.41!4.31!MGA;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.41!3.77!ZNF699;;chr3:107241993..107242023,+!p4@BBX!0.41!3.46!BBX;;chr2:28618532..28618610,+!p4@FOSL2!0.41!3.31!FOSL2;;chr15:67358146..67358157,+!p7@SMAD3!0.41!3.23!SMAD3;;chr19:12075844..12075880,+!p3@ZNF763!0.41!3.23!ZNF763;;chr19:11877805..11877832,+!p2@ZNF441!0.41!3.15!ZNF441;;chr9:102584241..102584261,+!p4@NR4A3!0.41!2.92!NR4A3;;chr3:44754176..44754196,+!p2@ZNF502!0.41!2.54!ZNF502;;chr9:73029018..73029042,-!p6@KLF9!0.41!2.31!KLF9;;chr1:61869835..61869848,+!p8@NFIA!0.41!2.31!NFIA;;chr14:35873101..35873119,-!p6@NFKBIA!0.41!2.31!NFKBIA;;chr5:92920256..92920282,+!p7@NR2F1!0.41!2.08!NR2F1;;chr13:73636252..73636307,+!p2@KLF5!0.41!2.00!KLF5;;chr4:26322616..26322652,+!p1@RBPJ!0.40!49.25!RBPJ;;chrX:70586140..70586218,+!p1@TAF1!0.40!41.48!TAF1;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.40!22.39!GLIS2;;chr8:146126799..146126865,-!p1@COMMD5,p1@ZNF250!0.40!20.78!ZNF250;;chr19:12273866..12273935,+!p1@ZNF136!0.40!20.08!ZNF136;;chr17:47439437..47439533,-!p1@ZNF652!0.40!18.16!ZNF652;;chr12:80084768..80084821,-!p2@PAWR!0.40!15.24!PAWR;;chr19:37701396..37701453,-!p1@ZNF585B!0.40!12.47!ZNF585B;; | |expression_enrichment_score=chr4:174451370..174451387,-!p1@HAND2!1.93!83.26!HAND2;;chr4:57547454..57547469,-!p1@HOPX!1.92!81.57!HOPX;;chr6:152128810..152128827,+!p2@ESR1!1.90!79.26!ESR1;;chr19:46801639..46801699,+!p1@HIF3A!1.90!77.72!HIF3A;;chr11:34642612..34642646,+!p1@EHF!1.88!74.03!EHF;;chr6:152126790..152126828,+!p3@ESR1!1.82!64.41!ESR1;;chr6:152126830..152126847,+!p4@ESR1!1.80!62.33!ESR1;;chr20:62680984..62680999,-!p1@SOX18!1.78!78.03!SOX18;;chr10:119302232..119302265,+!p1@EMX2!1.78!59.71!EMX2;;chr17:80797886..80797906,-!p1@ZNF750!1.71!49.86!ZNF750;;chr6:134210243..134210257,+!p1@TCF21!1.70!48.86!TCF21;;chr21:39870339..39870443,-!p1@ERG!1.67!45.79!ERG;;chr7:27239703..27239715,-!p1@HOXA13!1.65!43.32!HOXA13;;chr8:55370487..55370503,+!p1@SOX17!1.64!42.78!SOX17;;chr11:101000537..101000553,-!p1@PGR!1.64!42.48!PGR;;chr1:40105299..40105326,-!p1@HEYL!1.63!41.55!HEYL;;chr11:113930425..113930471,+!p1@ZBTB16!1.58!52.10!ZBTB16;;chr7:27224842..27224872,-!p1@HOXA11!1.57!36.17!HOXA11;;chr1:170632285..170632309,+!p1@PRRX1!1.56!39.48!PRRX1;;chr11:100999775..100999800,-!p2@PGR!1.56!35.40!PGR;;chr3:128212033..128212051,-!p1@GATA2!1.56!35.40!GATA2;;chr5:134369879..134369898,-!p2@PITX1!1.55!34.55!PITX1;;chr1:164528410..164528428,+!p1@PBX1!1.53!237.70!PBX1;;chrX:66763856..66763896,+!p1@AR!1.53!46.71!AR;;chr1:170633058..170633084,+!p5@PRRX1!1.51!31.24!PRRX1;;chr7:27224795..27224840,-!p2@HOXA11!1.51!31.16!HOXA11;;chr1:170633348..170633399,+!p2@PRRX1!1.50!40.94!PRRX1;;chr17:38256799..38256815,-!p3@NR1D1!1.49!53.10!NR1D1;;chr17:53342311..53342400,+!p1@HLF!1.48!33.01!HLF;;chr2:27371879..27371907,+!p1@TCF23!1.48!29.24!TCF23;;chr7:27239740..27239759,-!p2@HOXA13!1.45!27.09!HOXA13;;chr8:99956662..99956684,+!p1@OSR2!1.44!40.71!OSR2;;chr1:201979743..201979762,+!p1@ELF3!1.44!26.39!ELF3;;chr17:38256822..38256851,-!p1@NR1D1!1.43!194.99!NR1D1;;chr7:27213893..27213954,-!p1@HOXA10!1.43!26.09!HOXA10;;chr7:44143925..44143970,+!p1@AEBP1!1.42!539.96!AEBP1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.41!24.85!PEG3;;chr15:96873984..96873999,+!p3@NR2F2!1.40!172.52!NR2F2;;chr4:81118647..81118666,+!p1@PRDM8!1.40!31.70!PRDM8;;chr22:41763452..41763466,+!p2@TEF!1.40!24.24!TEF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.40!23.85!ZBED1;;chr5:92919100..92919135,+!p3@NR2F1!1.39!28.47!NR2F1;;chr12:52437488..52437507,+!p2@NR4A1!1.37!22.55!NR4A1;;chr6:152128782..152128803,+!p5@ESR1!1.36!22.01!ESR1;;chr3:69788576..69788648,+!p1@MITF!1.35!110.96!MITF;;chr20:55204351..55204377,+!p1@TFAP2C!1.35!26.78!TFAP2C;;chr16:79634624..79634642,-!p1@MAF!1.34!80.41!MAF;;chr2:66662249..66662267,+!p2@MEIS1!1.34!78.10!MEIS1;;chr9:77112244..77112262,+!p1@RORB!1.33!22.78!RORB;;chr11:32457075..32457095,-!p1@WT1!1.33!20.55!WT1;;chr16:79634595..79634620,-!p2@MAF!1.32!36.09!MAF;;chr6:152011654..152011682,+!p1@ESR1!1.32!19.78!ESR1;;chr9:114287433..114287513,+!p1@ZNF483!1.31!50.17!ZNF483;;chr18:53068911..53068935,-!p4@TCF4!1.31!21.85!TCF4;;chr1:170632959..170632987,+!p4@PRRX1!1.31!21.16!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!1.31!19.47!SOX7;;chr15:96874012..96874042,+!p2@NR2F2!1.30!164.21!NR2F2;;chr3:189507432..189507459,+!p1@TP63!1.30!19.01!TP63;;chr15:101069113..101069169,-!p1@CERS3!1.30!18.85!CERS3;;chr6:34524093..34524135,-!p1@SPDEF!1.30!18.85!SPDEF;;chr7:63505799..63505904,+!p1@ZNF727!1.29!18.70!ZNF727;;chr16:51185172..51185197,-!p1@SALL1!1.29!18.70!SALL1;;chr2:145277882..145277967,-!p3@ZEB2!1.28!31.16!ZEB2;;chr7:27192185..27192209,-!p1@HOXA3!1.28!18.01!HOXA3;;chr5:92918919..92918942,+!p1@NR2F1!1.27!77.64!NR2F1;;chr20:51588873..51588953,+!p1@TSHZ2!1.27!23.39!TSHZ2;;chr11:100999802..100999819,-!p4@PGR!1.27!17.47!PGR;;chr6:391743..391759,+!p1@IRF4!1.26!17.39!IRF4;;chr4:174450089..174450153,-!p2@HAND2!1.26!17.31!HAND2;;chr11:101000524..101000535,-!p3@PGR!1.25!16.93!PGR;;chr10:119302268..119302282,+!p4@EMX2!1.25!16.70!EMX2;;chr5:71803177..71803255,-!p1@ZNF366!1.25!16.62!ZNF366;;chr5:134369905..134369972,-!p1@PITX1!1.24!25.09!PITX1;;chr16:79633894..79633954,-!p3@MAF!1.23!30.93!MAF;;chr1:164528942..164528964,+!p11@PBX1!1.23!16.08!PBX1;;chr1:201979703..201979721,+!p2@ELF3!1.23!16.08!ELF3;;chr2:66662281..66662308,+!p1@MEIS1!1.22!53.71!MEIS1;;chr2:19558373..19558392,-!p1@OSR1!1.22!42.17!OSR1;;chr17:7492684..7492778,-!p2@SOX15!1.22!32.78!SOX15;;chr13:72441315..72441454,-!p1@DACH1!1.22!30.93!DACH1;;chr11:113930291..113930339,+!p2@ZBTB16!1.21!24.85!ZBTB16;;chr7:44143978..44143989,+!p2@AEBP1!1.20!26.93!AEBP1;;chr1:170633262..170633285,+!p3@PRRX1!1.20!17.16!PRRX1;;chr1:164528445..164528459,+!p2@PBX1!1.19!45.09!PBX1;;chr1:164528911..164528940,+!p7@PBX1!1.19!21.78!PBX1;;chr22:38380543..38380569,-!p1@SOX10!1.19!14.54!SOX10;;chr10:119302508..119302559,+!p5@EMX2!1.19!14.31!EMX2;;chr12:52445218..52445237,+!p1@NR4A1!1.18!176.29!NR4A1;;chr11:113930401..113930422,+!p3@ZBTB16!1.18!14.24!ZBTB16;;chr11:129245526..129245553,+!p1@BARX2!1.18!14.24!BARX2;;chr7:27205136..27205164,-!p1@HOXA9!1.18!14.16!HOXA9;;chr6:126070769..126070801,+!p1@HEY2!1.17!15.70!HEY2;;chr9:16575347..16575359,-!p12@BNC2!1.17!13.85!BNC2;;chr3:128206762..128206781,-!p2@GATA2!1.16!83.72!GATA2;;chr2:239756671..239756732,+!p1@TWIST2!1.16!42.63!TWIST2;;chr12:24715376..24715432,-!p1@SOX5!1.16!17.24!SOX5;;chr3:138665937..138665968,-!p1@FOXL2!1.16!13.47!FOXL2;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!46.79!BHLHE41;;chr4:4861385..4861398,+!p1@MSX1!1.15!38.94!MSX1;;chr4:174451350..174451363,-!p3@HAND2!1.15!13.24!HAND2;;chr2:27371919..27371935,+!p2@TCF23!1.15!13.16!TCF23;;chr2:176969228..176969260,+!p1@HOXD11!1.15!13.08!HOXD11;;chr6:19837592..19837621,+!p1@ID4!1.14!77.64!ID4;;chr3:114819124..114819200,-!p3@ZBTB20!1.14!29.47!ZBTB20;;chr6:1312325..1312340,+!p1@FOXQ1!1.13!20.39!FOXQ1;;chr16:86544113..86544145,+!p1@FOXF1!1.13!15.70!FOXF1;;chr5:50679228..50679288,+!p1@ISL1!1.13!12.47!ISL1;;chr3:169381420..169381535,-!p1@MECOM!1.12!14.39!MECOM;;chr18:52989031..52989079,-!p2@TCF4!1.11!28.32!TCF4;;chr11:34642656..34642667,+!p2@EHF!1.11!11.85!EHF;;chr19:45971246..45971265,+!p1@FOSB!1.10!214.31!FOSB;;chr1:164528384..164528409,+!p3@PBX1!1.10!36.09!PBX1;;chr12:26277817..26277863,-!p2@BHLHE41!1.10!15.77!BHLHE41;;chr2:122042770..122042785,-!p1@TFCP2L1!1.10!11.62!TFCP2L1;;chr5:88178983..88179012,-!p1@MEF2C!1.09!87.26!MEF2C;;chr15:96869255..96869291,+!p6@NR2F2!1.09!20.62!NR2F2;;chr15:42749722..42749739,-!p2@ZFP106!1.09!20.31!ZFP106;;chr15:57511609..57511651,+!p2@TCF12!1.09!19.08!TCF12;;chr7:44143997..44144008,+!p3@AEBP1!1.09!14.47!AEBP1;;chr1:209979467..209979494,-!p1@IRF6!1.09!12.62!IRF6;;chr5:158526917..158526932,-!p1@EBF1!1.07!26.93!EBF1;;chr17:53344980..53345011,+!p3@HLF!1.07!10.85!HLF;;chr1:24645921..24645973,+!p2@GRHL3!1.07!10.62!GRHL3;;chr8:106330656..106330684,+!p1@ZFPM2!1.06!27.63!ZFPM2;;chr15:37390850..37390909,-!p3@MEIS2!1.06!20.78!MEIS2;;chr20:50179368..50179392,-!p2@NFATC2!1.06!13.54!NFATC2;;chr14:75745523..75745537,+!p1@FOS!1.05!1244.75!FOS;;chr11:47400078..47400106,-!p1@SPI1!1.05!10.23!SPI1;;chr10:77161533..77161546,-!p2@ZNF503!1.04!39.86!ZNF503;;chr1:61548374..61548415,+!p4@NFIA!1.04!18.70!NFIA;;chr20:2673383..2673441,+!p1@EBF4!1.04!15.85!EBF4;;chr2:177001290..177001315,+!p1@HOXD3!1.04!9.93!HOXD3;;chrX:66763914..66763933,+!p3@AR!1.04!9.85!AR;;chr10:77161504..77161530,-!p1@ZNF503!1.03!130.35!ZNF503;;chr1:61548069..61548102,+!p3@NFIA!1.03!23.62!NFIA;;chr1:164528616..164528660,+!p5@PBX1!1.03!20.16!PBX1;;chr10:119302182..119302196,+!p6@EMX2!1.03!9.77!EMX2;;chr1:204042233..204042249,+!p1@SOX13!1.02!61.10!SOX13;;chr1:164528340..164528379,+!p4@PBX1!1.02!23.78!PBX1;;chr2:166326200..166326216,+!p1@CSRNP3!1.02!14.16!CSRNP3;;chr2:176994408..176994492,+!p1@HOXD8!1.02!9.39!HOXD8;;chr11:32457413..32457431,-!p2@WT1!1.02!9.39!WT1;;chr3:141150883..141150961,+!p6@ZBTB38!1.01!9.31!ZBTB38;;chr17:59477233..59477263,+!p1@TBX2!1.00!28.47!TBX2;;chrX:66763815..66763854,+!p2@AR!1.00!12.00!AR;;chr8:93107451..93107468,-!p2@RUNX1T1!1.00!9.00!RUNX1T1;;chr15:96873921..96873946,+!p1@NR2F2!0.99!251.09!NR2F2;;chr5:158526459..158526481,-!p2@EBF1!0.99!11.93!EBF1;;chr3:126076242..126076257,-!p1@KLF15!0.99!11.08!KLF15;;chr5:92919068..92919082,+!p5@NR2F1!0.99!10.62!NR2F1;;chr7:42276787..42276815,-!p1@GLI3!0.98!23.32!GLI3;;chr10:119303078..119303169,+!p2@EMX2!0.98!8.62!EMX2;;chr11:101000445..101000465,-!p5@PGR!0.98!8.46!PGR;;chr19:46800289..46800327,+!p2@HIF3A!0.98!8.46!HIF3A;;chr17:53344945..53344977,+!p2@HLF!0.98!8.46!HLF;;chr13:41240737..41240787,-!p1@FOXO1!0.97!101.11!FOXO1;;chr13:73633131..73633149,+!p1@KLF5!0.97!90.80!KLF5;;chr3:114866084..114866118,-!p2@ZBTB20!0.97!31.32!ZBTB20;;chr17:1959369..1959388,+!p2@HIC1!0.97!22.62!HIC1;;chr20:30433396..30433414,-!p1@FOXS1!0.97!8.31!FOXS1;;chr2:176969179..176969226,+!p2@HOXD11!0.97!8.23!HOXD11;;chr9:110252035..110252057,-!p1@KLF4!0.96!133.12!KLF4;;chr5:92918894..92918912,+!p2@NR2F1!0.96!27.09!NR2F1;;chr17:38256877..38256900,-!p2@NR1D1!0.96!26.86!NR1D1;;chr15:96869222..96869251,+!p18@NR2F2!0.96!9.54!NR2F2;;chr18:45663490..45663528,-!p2@ZBTB7C!0.96!8.08!ZBTB7C;;chr1:61547894..61547968,+!p2@NFIA!0.94!23.39!NFIA;;chr7:15726296..15726315,-!p1@MEOX2!0.94!7.77!MEOX2;;chr17:46682321..46682362,-!p1@HOXB6!0.94!7.62!HOXB6;;chr15:37392724..37392757,-!p1@MEIS2!0.93!35.86!MEIS2;;chr12:96588368..96588394,+!p3@ELK3!0.93!20.78!ELK3;;chr19:13134772..13134822,+!p2@NFIX!0.93!11.39!NFIX;;chr2:176981499..176981522,+!p2@HOXD10!0.92!7.39!HOXD10;;chr7:96654133..96654150,-!p1@DLX5!0.92!7.23!DLX5;;chr12:115121962..115121987,-!p1@TBX3!0.90!61.64!TBX3;;chr11:46299199..46299233,+!p1@CREB3L1!0.90!37.63!CREB3L1;;chr7:113726357..113726443,+!p1@FOXP2!0.90!12.39!FOXP2;;chr18:52989081..52989117,-!p7@TCF4!0.90!10.93!TCF4;;chr19:38085768..38085821,+!p1@ZNF540!0.90!10.70!ZNF540;;chr17:38256590..38256599,-!p8@NR1D1!0.90!7.00!NR1D1;;chr10:119302645..119302712,+!p3@EMX2!0.90!7.00!EMX2;;chr2:176969097..176969109,+!p3@HOXD11!0.90!6.93!HOXD11;;chr20:39317868..39317884,-!p1@MAFB!0.89!84.26!MAFB;;chr18:42260920..42260951,+!p4@SETBP1!0.89!6.85!SETBP1;;chr1:164529004..164529015,+!p15@PBX1!0.89!6.77!PBX1;;chr3:25470156..25470227,+!p2@RARB!0.89!6.69!RARB;;chr19:16435625..16435682,+!p1@K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ERE!0.42!3.15!RERE;;chr18:53257068..53257086,-!p12@TCF4!0.42!2.54!TCF4;;chr5:88179518..88179569,-!p5@MEF2C!0.42!2.39!MEF2C;;chr3:168865194..168865245,-!p3@MECOM!0.42!2.39!MECOM;;chr4:103422232..103422241,+!p6@NFKB1!0.42!2.15!NFKB1;;chr18:72922858..72922897,+!p4@TSHZ1!0.42!2.08!TSHZ1;;chr6:41514178..41514192,+!p4@FOXP4!0.42!2.00!FOXP4;;chr5:134369848..134369853,-!p6@PITX1!0.42!1.62!PITX1;;chr6:10415484..10415508,-!p3@TFAP2A!0.42!1.62!TFAP2A;;chr6:126070748..126070768,+!p2@HEY2!0.42!1.62!HEY2;;chr6:152128371..152128382,+!p14@ESR1!0.42!1.62!ESR1;;chr7:27170359..27170381,-!p1@HOXA4!0.42!1.62!HOXA4;;chr8:93107827..93107845,-!p20@RUNX1T1!0.42!1.62!RUNX1T1;;chr2:171571827..171571853,+!p1@SP5!0.42!1.62!SP5;;chr2:177001268..177001287,+!p3@HOXD3!0.42!1.62!HOXD3;;chr2:238592039..238592054,+!p4@LRRFIP1!0.42!1.62!LRRFIP1;;chr3:27763807..27763822,-!p1@EOMES!0.42!1.62!EOMES;;chr4:109090075..109090095,-!p2@LEF1!0.42!1.62!LEF1;;chr10:64018918..64018936,+!p2@ZNF365!0.42!1.62!ZNF365;;chr1:165414325..165414369,-!p1@RXRG!0.42!1.62!RXRG;;chr17:46667628..46667642,-!p2@HOXB3!0.42!1.62!HOXB3;;chr18:53068940..53068951,-!p21@TCF4!0.42!1.62!TCF4;;chrX:24167086..24167111,+!p4@ZFX!0.42!1.62!ZFX;;chr3:5021113..5021180,+!p1@BHLHE40!0.41!164.60!BHLHE40;;chr11:10879593..10879620,-!p1@ZBED5!0.41!72.49!ZBED5;;chr11:118307179..118307223,+!p1@MLL!0.41!71.64!MLL;;chr7:137686791..137686821,-!p1@CREB3L2!0.41!67.56!CREB3L2;;chr8:124286495..124286548,-!p1@ZHX1!0.41!22.32!ZHX1;;chr1:167190091..167190156,+!p1@POU2F1!0.41!17.70!POU2F1;;chr2:174828892..174828972,-!p2@SP3!0.41!16.39!SP3;;chr22:24093267..24093327,-!p1@ZNF70!0.41!15.24!ZNF70;;chr9:4300050..4300118,-!p1@GLIS3!0.41!14.54!GLIS3;;chr19:52511437..52511490,-!p1@ZNF615!0.41!13.16!ZNF615;;chr8:28243661..28243709,-!p1@ZNF395!0.41!12.93!ZNF395;;chr4:140005341..140005411,-!p3@ELF2!0.41!11.77!ELF2;;chr6:41703296..41703367,-!p1@TFEB!0.41!11.23!TFEB;;chr2:60780753..60780800,-!p1@BCL11A!0.41!10.85!BCL11A;;chr19:11959532..11959593,+!p1@ZNF439!0.41!8.23!ZNF439;;chr19:53696587..53696633,-!p1@ZNF665!0.41!8.08!ZNF665;;chr6:28411241..28411284,-!p1@ZSCAN23!0.41!6.62!ZSCAN23;;chr10:97890024..97890064,+!p2@ZNF518A!0.41!5.62!ZNF518A;;chr7:19157043..19157088,-!p2@TWIST1!0.41!5.16!TWIST1;;chr12:10875658..10875708,-!p2@CSDA!0.41!4.69!CSDA;;chr17:38256973..38256990,-!p5@NR1D1!0.41!4.62!NR1D1;;chr15:41913412..41913456,+!p3@MGA!0.41!4.31!MGA;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.41!3.77!ZNF699;;chr3:107241993..107242023,+!p4@BBX!0.41!3.46!BBX;;chr2:28618532..28618610,+!p4@FOSL2!0.41!3.31!FOSL2;;chr15:67358146..67358157,+!p7@SMAD3!0.41!3.23!SMAD3;;chr19:12075844..12075880,+!p3@ZNF763!0.41!3.23!ZNF763;;chr19:11877805..11877832,+!p2@ZNF441!0.41!3.15!ZNF441;;chr9:102584241..102584261,+!p4@NR4A3!0.41!2.92!NR4A3;;chr3:44754176..44754196,+!p2@ZNF502!0.41!2.54!ZNF502;;chr9:73029018..73029042,-!p6@KLF9!0.41!2.31!KLF9;;chr1:61869835..61869848,+!p8@NFIA!0.41!2.31!NFIA;;chr14:35873101..35873119,-!p6@NFKBIA!0.41!2.31!NFKBIA;;chr5:92920256..92920282,+!p7@NR2F1!0.41!2.08!NR2F1;;chr13:73636252..73636307,+!p2@KLF5!0.41!2.00!KLF5;;chr4:26322616..26322652,+!p1@RBPJ!0.40!49.25!RBPJ;;chrX:70586140..70586218,+!p1@TAF1!0.40!41.48!TAF1;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.40!22.39!GLIS2;;chr8:146126799..146126865,-!p1@COMMD5,p1@ZNF250!0.40!20.78!ZNF250;;chr19:12273866..12273935,+!p1@ZNF136!0.40!20.08!ZNF136;;chr17:47439437..47439533,-!p1@ZNF652!0.40!18.16!ZNF652;;chr12:80084768..80084821,-!p2@PAWR!0.40!15.24!PAWR;;chr19:37701396..37701453,-!p1@ZNF585B!0.40!12.47!ZNF585B;; | ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000995;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003975;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316 | |ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cervix%252c%2520adult%252c%2520pool1.CNhs10618.10013-101C4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cervix%252c%2520adult%252c%2520pool1.CNhs10618.10013-101C4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cervix%252c%2520adult%252c%2520pool1.CNhs10618.10013-101C4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/cervix%252c%2520adult%252c%2520pool1.CNhs10618.10013-101C4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/cervix%252c%2520adult%252c%2520pool1.CNhs10618.10013-101C4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10013-101C4 | |id=FF:10013-101C4 | ||
|is_a=EFO:0002091;;FF:0010013 | |is_a=EFO:0002091;;FF:0010013 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs10618 | |library_id=CNhs10618 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs10618 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10013 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10013 | |||
|name=cervix, adult, pool1 | |name=cervix, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 51: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10618,LSID656,release008,COMPLETED | |profile_hcage=CNhs10618,LSID656,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|top_motifs=TFAP2{A,C}:2.78841791972;HBP1_HMGB_SSRP1_UBTF:2.66418199955;TBP:2.59701902244;MYBL2:2.56406023213;MZF1:2.44824711218;MAZ:2.37605828308;SRF:2.32687504132;PRDM1:2.0414836141;RBPJ:1.9928431499;GTF2I:1.96508492723;NFATC1..3:1.96456406655;MYFfamily:1.96328329408;PATZ1:1.94656173308;RREB1:1.9301016147;T:1.92369965392;SP1:1.89683222458;SMAD1..7,9:1.87849452569;SPZ1:1.8580446519;ZNF238:1.80054918696;TFCP2:1.78166297792;TFAP4:1.77962060421;MED-1{core}:1.62538099308;FOX{D1,D2}:1.60862112423;HMX1:1.58635573867;TLX1..3_NFIC{dimer}:1.57951442735;IKZF1:1.55299649151;FOXO1,3,4:1.52068051217;XCPE1{core}:1.51087171808;GCM1,2:1.47423587098;ESR1:1.43125832553;ZNF384:1.42820423251;PAX5:1.41840292539;MTE{core}:1.36168130102;EP300:1.34604240096;ZIC1..3:1.32620001478;HIC1:1.31541993312;XBP1:1.31185547712;TAL1_TCF{3,4,12}:1.29909101468;KLF4:1.27090424711;TFAP2B:1.26811036076;GATA4:1.25663396415;GTF2A1,2:1.23667851969;NR1H4:1.19971727229;NKX2-3_NKX2-5:1.19684641426;TLX2:1.19148512594;EGR1..3:1.18740722222;AR:1.16499251617;CDC5L:1.15885426144;ZNF423:1.14814143823;NANOG:1.102724901;MTF1:1.08809810104;TEAD1:1.0827407704;NKX2-1,4:1.07643584323;ZNF148:1.05457788563;NR3C1:1.02602104519;POU5F1:1.02315125256;GLI1..3:1.01750571477;TBX4,5:1.01535101169;MEF2{A,B,C,D}:0.979118720032;FOXM1:0.898384541259;FOX{I1,J2}:0.863745543426;BPTF:0.862516753192;SOX5:0.835227657119;FOXP1:0.817571328841;GFI1B:0.816475566008;POU3F1..4:0.800482083573;BREu{core}:0.783894064376;PAX1,9:0.778452730138;STAT1,3:0.753657593182;POU2F1..3:0.715175035238;RFX2..5_RFXANK_RFXAP:0.678125301967;NHLH1,2:0.668005521573;SNAI1..3:0.666736187373;POU6F1:0.652478700962;TEF:0.630920105518;HSF1,2:0.616181633554;IRF7:0.603749628904;ADNP_IRX_SIX_ZHX:0.58556188689;HOX{A6,A7,B6,B7}:0.578746948857;IKZF2:0.565389133842;RXRA_VDR{dimer}:0.563907864659;HAND1,2:0.559507693427;GZF1:0.542648782378;FOXN1:0.502390953392;TGIF1:0.484000613926;ZFP161:0.458904100421;ALX4:0.456260801489;ZEB1:0.454683447298;FOXL1:0.445481810129;ATF6:0.442143297693;DBP:0.442133411688;SOX2:0.438783351766;TP53:0.438055247062;FOXD3:0.412131472444;ETS1,2:0.383234016538;REST:0.365481302949;EBF1:0.333111864382;LMO2:0.285072211525;VSX1,2:0.282673278109;IRF1,2:0.277881639669;NKX6-1,2:0.239702783208;MAFB:0.23529657948;PITX1..3:0.22593785283;NR5A1,2:0.22415411019;RXR{A,B,G}:0.1635403803;HNF1A:0.136215248753;SPIB:0.130552496904;GFI1:0.125026577515;POU1F1:0.122944798064;NKX3-2:0.0980797644744;STAT2,4,6:0.0820950859654;RFX1:0.0622102722891;ATF2:0.0435852807468;HOX{A4,D4}:0.0401369975699;ALX1:0.0229090773248;SREBF1,2:0.0183122457425;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00379342179742;UFEwm:-0.00571726424107;CDX1,2,4:-0.0469839426088;FOXQ1:-0.049721280653;PRRX1,2:-0.0592084510019;PAX6:-0.0740725930546;TOPORS:-0.091335341039;ATF4:-0.100509576871;SPI1:-0.116863749423;GATA6:-0.12017256239;ZBTB6:-0.120858799369;PBX1:-0.125873531867;CRX:-0.144929155467;NR6A1:-0.148470871281;ELF1,2,4:-0.15762856181;AHR_ARNT_ARNT2:-0.158113904972;ARID5B:-0.164426393237;ZNF143:-0.169323041345;NFIL3:-0.172336390214;ESRRA:-0.197021208519;HNF4A_NR2F1,2:-0.203567201077;JUN:-0.203684155018;SOX{8,9,10}:-0.229287671114;CUX2:-0.248274958403;LHX3,4:-0.330683785941;NFIX:-0.332947477311;AIRE:-0.335104656767;RUNX1..3:-0.342437679978;SOX17:-0.347001381421;FOS_FOS{B,L1}_JUN{B,D}:-0.356416000848;LEF1_TCF7_TCF7L1,2:-0.36843540368;CEBPA,B_DDIT3:-0.387439622238;FOSL2:-0.39205931299;PAX3,7:-0.392962956347;PDX1:-0.425367502023;FOXA2:-0.429863892409;HLF:-0.439011740808;NRF1:-0.445260206341;CREB1:-0.458354736344;NFKB1_REL_RELA:-0.474565989917;FOX{F1,F2,J1}:-0.508528183042;TFDP1:-0.519999109166;NFE2:-0.524596985268;HES1:-0.54353157358;E2F1..5:-0.545211692512;BACH2:-0.571318134141;FOXP3:-0.58236260042;RORA:-0.582821901417;MYOD1:-0.612343329394;NKX2-2,8:-0.688132881863;NFY{A,B,C}:-0.699054181113;ZBTB16:-0.709909780609;DMAP1_NCOR{1,2}_SMARC:-0.711539698724;PAX4:-0.746353490309;EVI1:-0.761273140894;PPARG:-0.770576967901;YY1:-0.795844346768;ATF5_CREB3:-0.800389556074;NFE2L2:-0.818516053879;HMGA1,2:-0.833907930821;ONECUT1,2:-0.915967365748;NANOG{mouse}:-0.92514125898;bHLH_family:-0.949045969618;PAX2:-0.98496987309;OCT4_SOX2{dimer}:-1.0257076622;EN1,2:-1.04611939704;HOX{A5,B5}:-1.06681190245;NFE2L1:-1.11950628543;HIF1A:-1.26170384115;ELK1,4_GABP{A,B1}:-1.37849715045;NKX3-1:-1.41460366009;MYB:-1.42430972978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.53655093804;PAX8:-1.95044913739;STAT5{A,B}:-2.0703098399;HOXA9_MEIS1:-2.2025838615 | |top_motifs=TFAP2{A,C}:2.78841791972;HBP1_HMGB_SSRP1_UBTF:2.66418199955;TBP:2.59701902244;MYBL2:2.56406023213;MZF1:2.44824711218;MAZ:2.37605828308;SRF:2.32687504132;PRDM1:2.0414836141;RBPJ:1.9928431499;GTF2I:1.96508492723;NFATC1..3:1.96456406655;MYFfamily:1.96328329408;PATZ1:1.94656173308;RREB1:1.9301016147;T:1.92369965392;SP1:1.89683222458;SMAD1..7,9:1.87849452569;SPZ1:1.8580446519;ZNF238:1.80054918696;TFCP2:1.78166297792;TFAP4:1.77962060421;MED-1{core}:1.62538099308;FOX{D1,D2}:1.60862112423;HMX1:1.58635573867;TLX1..3_NFIC{dimer}:1.57951442735;IKZF1:1.55299649151;FOXO1,3,4:1.52068051217;XCPE1{core}:1.51087171808;GCM1,2:1.47423587098;ESR1:1.43125832553;ZNF384:1.42820423251;PAX5:1.41840292539;MTE{core}:1.36168130102;EP300:1.34604240096;ZIC1..3:1.32620001478;HIC1:1.31541993312;XBP1:1.31185547712;TAL1_TCF{3,4,12}:1.29909101468;KLF4:1.27090424711;TFAP2B:1.26811036076;GATA4:1.25663396415;GTF2A1,2:1.23667851969;NR1H4:1.19971727229;NKX2-3_NKX2-5:1.19684641426;TLX2:1.19148512594;EGR1..3:1.18740722222;AR:1.16499251617;CDC5L:1.15885426144;ZNF423:1.14814143823;NANOG:1.102724901;MTF1:1.08809810104;TEAD1:1.0827407704;NKX2-1,4:1.07643584323;ZNF148:1.05457788563;NR3C1:1.02602104519;POU5F1:1.02315125256;GLI1..3:1.01750571477;TBX4,5:1.01535101169;MEF2{A,B,C,D}:0.979118720032;FOXM1:0.898384541259;FOX{I1,J2}:0.863745543426;BPTF:0.862516753192;SOX5:0.835227657119;FOXP1:0.817571328841;GFI1B:0.816475566008;POU3F1..4:0.800482083573;BREu{core}:0.783894064376;PAX1,9:0.778452730138;STAT1,3:0.753657593182;POU2F1..3:0.715175035238;RFX2..5_RFXANK_RFXAP:0.678125301967;NHLH1,2:0.668005521573;SNAI1..3:0.666736187373;POU6F1:0.652478700962;TEF:0.630920105518;HSF1,2:0.616181633554;IRF7:0.603749628904;ADNP_IRX_SIX_ZHX:0.58556188689;HOX{A6,A7,B6,B7}:0.578746948857;IKZF2:0.565389133842;RXRA_VDR{dimer}:0.563907864659;HAND1,2:0.559507693427;GZF1:0.542648782378;FOXN1:0.502390953392;TGIF1:0.484000613926;ZFP161:0.458904100421;ALX4:0.456260801489;ZEB1:0.454683447298;FOXL1:0.445481810129;ATF6:0.442143297693;DBP:0.442133411688;SOX2:0.438783351766;TP53:0.438055247062;FOXD3:0.412131472444;ETS1,2:0.383234016538;REST:0.365481302949;EBF1:0.333111864382;LMO2:0.285072211525;VSX1,2:0.282673278109;IRF1,2:0.277881639669;NKX6-1,2:0.239702783208;MAFB:0.23529657948;PITX1..3:0.22593785283;NR5A1,2:0.22415411019;RXR{A,B,G}:0.1635403803;HNF1A:0.136215248753;SPIB:0.130552496904;GFI1:0.125026577515;POU1F1:0.122944798064;NKX3-2:0.0980797644744;STAT2,4,6:0.0820950859654;RFX1:0.0622102722891;ATF2:0.0435852807468;HOX{A4,D4}:0.0401369975699;ALX1:0.0229090773248;SREBF1,2:0.0183122457425;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.00379342179742;UFEwm:-0.00571726424107;CDX1,2,4:-0.0469839426088;FOXQ1:-0.049721280653;PRRX1,2:-0.0592084510019;PAX6:-0.0740725930546;TOPORS:-0.091335341039;ATF4:-0.100509576871;SPI1:-0.116863749423;GATA6:-0.12017256239;ZBTB6:-0.120858799369;PBX1:-0.125873531867;CRX:-0.144929155467;NR6A1:-0.148470871281;ELF1,2,4:-0.15762856181;AHR_ARNT_ARNT2:-0.158113904972;ARID5B:-0.164426393237;ZNF143:-0.169323041345;NFIL3:-0.172336390214;ESRRA:-0.197021208519;HNF4A_NR2F1,2:-0.203567201077;JUN:-0.203684155018;SOX{8,9,10}:-0.229287671114;CUX2:-0.248274958403;LHX3,4:-0.330683785941;NFIX:-0.332947477311;AIRE:-0.335104656767;RUNX1..3:-0.342437679978;SOX17:-0.347001381421;FOS_FOS{B,L1}_JUN{B,D}:-0.356416000848;LEF1_TCF7_TCF7L1,2:-0.36843540368;CEBPA,B_DDIT3:-0.387439622238;FOSL2:-0.39205931299;PAX3,7:-0.392962956347;PDX1:-0.425367502023;FOXA2:-0.429863892409;HLF:-0.439011740808;NRF1:-0.445260206341;CREB1:-0.458354736344;NFKB1_REL_RELA:-0.474565989917;FOX{F1,F2,J1}:-0.508528183042;TFDP1:-0.519999109166;NFE2:-0.524596985268;HES1:-0.54353157358;E2F1..5:-0.545211692512;BACH2:-0.571318134141;FOXP3:-0.58236260042;RORA:-0.582821901417;MYOD1:-0.612343329394;NKX2-2,8:-0.688132881863;NFY{A,B,C}:-0.699054181113;ZBTB16:-0.709909780609;DMAP1_NCOR{1,2}_SMARC:-0.711539698724;PAX4:-0.746353490309;EVI1:-0.761273140894;PPARG:-0.770576967901;YY1:-0.795844346768;ATF5_CREB3:-0.800389556074;NFE2L2:-0.818516053879;HMGA1,2:-0.833907930821;ONECUT1,2:-0.915967365748;NANOG{mouse}:-0.92514125898;bHLH_family:-0.949045969618;PAX2:-0.98496987309;OCT4_SOX2{dimer}:-1.0257076622;EN1,2:-1.04611939704;HOX{A5,B5}:-1.06681190245;NFE2L1:-1.11950628543;HIF1A:-1.26170384115;ELK1,4_GABP{A,B1}:-1.37849715045;NKX3-1:-1.41460366009;MYB:-1.42430972978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.53655093804;PAX8:-1.95044913739;STAT5{A,B}:-2.0703098399;HOXA9_MEIS1:-2.2025838615 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10013-101C4;search_select_hide=table117:FF:10013-101C4 | |||
}} | }} |
Latest revision as of 12:13, 3 June 2020
Name: | cervix, adult, pool1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs10618 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10618
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10618
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0123 |
10 | 10 | 0.0322 |
100 | 100 | 0.0886 |
101 | 101 | 0.916 |
102 | 102 | 0.382 |
103 | 103 | 0.108 |
104 | 104 | 0.595 |
105 | 105 | 0.804 |
106 | 106 | 0.633 |
107 | 107 | 0.36 |
108 | 108 | 0.979 |
109 | 109 | 0.0121 |
11 | 11 | 0.0494 |
110 | 110 | 0.171 |
111 | 111 | 0.00282 |
112 | 112 | 0.944 |
113 | 113 | 0.143 |
114 | 114 | 0.00295 |
115 | 115 | 0.436 |
116 | 116 | 0.74 |
117 | 117 | 0.0189 |
118 | 118 | 0.0495 |
119 | 119 | 0.291 |
12 | 12 | 0.482 |
120 | 120 | 0.0828 |
121 | 121 | 0.733 |
122 | 122 | 0.89 |
123 | 123 | 0.0611 |
124 | 124 | 0.766 |
125 | 125 | 0.178 |
126 | 126 | 0.768 |
127 | 127 | 0.226 |
128 | 128 | 0.949 |
129 | 129 | 0.349 |
13 | 13 | 0.0532 |
130 | 130 | 0.664 |
131 | 131 | 0.289 |
132 | 132 | 0.0685 |
133 | 133 | 0.0049 |
134 | 134 | 0.11 |
135 | 135 | 0.352 |
136 | 136 | 0.347 |
137 | 137 | 0.336 |
138 | 138 | 0.558 |
139 | 139 | 0.311 |
14 | 14 | 0.823 |
140 | 140 | 0.212 |
141 | 141 | 0.765 |
142 | 142 | 0.678 |
143 | 143 | 0.00809 |
144 | 144 | 0.781 |
145 | 145 | 0.56 |
146 | 146 | 0.92 |
147 | 147 | 0.751 |
148 | 148 | 0.191 |
149 | 149 | 0.302 |
15 | 15 | 0.0335 |
150 | 150 | 0.383 |
151 | 151 | 0.652 |
152 | 152 | 0.705 |
153 | 153 | 0.338 |
154 | 154 | 0.885 |
155 | 155 | 0.351 |
156 | 156 | 0.949 |
157 | 157 | 0.494 |
158 | 158 | 0.435 |
159 | 159 | 0.423 |
16 | 16 | 0.233 |
160 | 160 | 0.69 |
161 | 161 | 0.425 |
162 | 162 | 0.167 |
163 | 163 | 0.415 |
164 | 164 | 0.0536 |
165 | 165 | 0.875 |
166 | 166 | 0.242 |
167 | 167 | 0.0268 |
168 | 168 | 0.603 |
169 | 169 | 0.489 |
17 | 17 | 0.461 |
18 | 18 | 0.0245 |
19 | 19 | 0.6 |
2 | 2 | 0.149 |
20 | 20 | 0.137 |
21 | 21 | 0.335 |
22 | 22 | 0.977 |
23 | 23 | 0.74 |
24 | 24 | 0.481 |
25 | 25 | 0.304 |
26 | 26 | 0.0245 |
27 | 27 | 0.98 |
28 | 28 | 0.704 |
29 | 29 | 0.00863 |
3 | 3 | 0.199 |
30 | 30 | 0.0439 |
31 | 31 | 0.966 |
32 | 32 | 0.63 |
33 | 33 | 0.138 |
34 | 34 | 0.461 |
35 | 35 | 0.246 |
36 | 36 | 0.0134 |
37 | 37 | 0.136 |
38 | 38 | 0.486 |
39 | 39 | 0.373 |
4 | 4 | 0.216 |
40 | 40 | 0.0297 |
41 | 41 | 0.0452 |
42 | 42 | 0.296 |
43 | 43 | 0.182 |
44 | 44 | 0.354 |
45 | 45 | 0.236 |
46 | 46 | 0.0935 |
47 | 47 | 0.0598 |
48 | 48 | 0.181 |
49 | 49 | 0.0897 |
5 | 5 | 0.511 |
50 | 50 | 0.629 |
51 | 51 | 0.685 |
52 | 52 | 0.356 |
53 | 53 | 0.817 |
54 | 54 | 0.919 |
55 | 55 | 0.932 |
56 | 56 | 0.681 |
57 | 57 | 0.139 |
58 | 58 | 0.565 |
59 | 59 | 0.906 |
6 | 6 | 0.72 |
60 | 60 | 0.86 |
61 | 61 | 0.373 |
62 | 62 | 0.308 |
63 | 63 | 0.521 |
64 | 64 | 0.2 |
65 | 65 | 0.566 |
66 | 66 | 0.0282 |
67 | 67 | 0.525 |
68 | 68 | 0.75 |
69 | 69 | 0.421 |
7 | 7 | 0.216 |
70 | 70 | 0.0343 |
71 | 71 | 0.0366 |
72 | 72 | 0.729 |
73 | 73 | 0.0593 |
74 | 74 | 0.229 |
75 | 75 | 0.00913 |
76 | 76 | 0.0371 |
77 | 77 | 0.41 |
78 | 78 | 0.128 |
79 | 79 | 0.824 |
8 | 8 | 0.178 |
80 | 80 | 0.193 |
81 | 81 | 0.541 |
82 | 82 | 0.854 |
83 | 83 | 0.526 |
84 | 84 | 0.899 |
85 | 85 | 0.765 |
86 | 86 | 0.647 |
87 | 87 | 0.0412 |
88 | 88 | 0.8 |
89 | 89 | 0.846 |
9 | 9 | 0.596 |
90 | 90 | 0.0772 |
91 | 91 | 0.712 |
92 | 92 | 0.991 |
93 | 93 | 0.057 |
94 | 94 | 0.0454 |
95 | 95 | 0.00543 |
96 | 96 | 0.193 |
97 | 97 | 0.781 |
98 | 98 | 0.102 |
99 | 99 | 0.268 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10618
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010013 human cervix - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000002 (uterine cervix)
0000995 (uterus)
0003134 (female reproductive organ)
0000479 (tissue)
0001560 (neck of organ)
0005156 (reproductive structure)
0000064 (organ part)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010013 (human cervix - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)