FFCP PHASE1:Mm9::chr2:156246819..156246850,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:156246819..156246850,+
|short_description=p2@Epb4.1l1
|description=CAGE_peak_2_at_Epb4.1l1_5end
|association_with_transcript=0bp_to_ENSMUST00000103136,ENSM...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13821 | |EntrezGene=13821 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=A2AUK5,A2AUK8,E9PV14 | |UniProt=A2AUK5,A2AUK8,E9PV14 | ||
|association_with_transcript=0bp_to_ENSMUST00000103136,ENSMUST00000109577,ENSMUST00000125153_5end | |||
|cluster_id=chr2:156246819..156246850,+ | |||
|description=CAGE_peak_2_at_Epb4.1l1_5end | |||
|id=chr2:156246819..156246850,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.52e-15!23;CL:0000337!2.52e-15!23;CL:0000540!7.24e-09!33;CL:0000047!7.24e-09!33;CL:0000031!7.24e-09!33;CL:0000404!7.24e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-15,23;CL:0000337,1.36e-15,23;CL:0000540,7.96e-09,33;CL:0000047,7.96e-09,33;CL:0000031,7.96e-09,33;CL:0000404,7.96e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.26e-14!34;UBERON:0002346!2.20e-13!71;UBERON:0003075!2.20e-13!71;UBERON:0007284!2.20e-13!71;UBERON:0004121!2.82e-13!102;UBERON:0000924!2.82e-13!102;UBERON:0006601!2.82e-13!102;UBERON:0001049!5.85e-13!52;UBERON:0005068!5.85e-13!52;UBERON:0006241!5.85e-13!52;UBERON:0007135!5.85e-13!52;UBERON:0000033!7.69e-13!63;UBERON:0000955!5.55e-12!50;UBERON:0006238!5.55e-12!50;UBERON:0003056!5.75e-12!49;UBERON:0001017!1.42e-11!73;UBERON:0005743!1.42e-11!73;UBERON:0003080!1.77e-11!40;UBERON:0002616!1.96e-11!49;UBERON:0002791!3.46e-11!29;UBERON:0003528!3.46e-11!29;UBERON:0001893!3.46e-11!29;UBERON:0002780!5.36e-11!39;UBERON:0001890!5.36e-11!39;UBERON:0006240!5.36e-11!39;UBERON:0000073!1.28e-10!75;UBERON:0001016!1.28e-10!75;UBERON:0000468!6.81e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.36e-15,34;UBERON:0000073,6.60e-15,54;UBERON:0001049,1.92e-13,52;UBERON:0005068,1.92e-13,52;UBERON:0006241,1.92e-13,52;UBERON:0007135,1.92e-13,52;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0010371,1.65e-12,73;UBERON:0003056,1.85e-12,49;UBERON:0003080,5.58e-12,40;UBERON:0004121,7.40e-12,95;UBERON:0000924,7.40e-12,95;UBERON:0006601,7.40e-12,95;UBERON:0001017,8.83e-12,73;UBERON:0003528,1.00e-11,29;UBERON:0002791,1.00e-11,29;UBERON:0001893,1.00e-11,29;UBERON:0002780,1.74e-11,39;UBERON:0001890,1.74e-11,39;UBERON:0006240,1.74e-11,39;UBERON:0000955,4.67e-11,47;UBERON:0006238,4.67e-11,47;UBERON:0001016,1.24e-10,75;UBERON:0002616,1.64e-10,46;UBERON:0000956,4.56e-07,21;UBERON:0001869,4.56e-07,21;UBERON:0000203,4.56e-07,21 | |||
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| ||
|short_description=p2@Epb4.1l1 | |||
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Latest revision as of 23:57, 25 September 2015
Short description: | p2@Epb4.1l1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Epb4.1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000103136, ENSMUST00000109577, ENSMUST00000125153_5end |
EntrezGene: | Epb4.1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-15 | 23 |
neuron | 7.96e-09 | 33 |
neuronal stem cell | 7.96e-09 | 33 |
neuroblast | 7.96e-09 | 33 |
electrically signaling cell | 7.96e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 5.36e-15 | 34 |
regional part of nervous system | 6.60e-15 | 54 |
neural tube | 1.92e-13 | 52 |
neural rod | 1.92e-13 | 52 |
future spinal cord | 1.92e-13 | 52 |
neural keel | 1.92e-13 | 52 |
neurectoderm | 1.33e-12 | 64 |
neural plate | 1.33e-12 | 64 |
presumptive neural plate | 1.33e-12 | 64 |
ecto-epithelium | 1.65e-12 | 73 |
pre-chordal neural plate | 1.85e-12 | 49 |
anterior neural tube | 5.58e-12 | 40 |
ectoderm-derived structure | 7.40e-12 | 95 |
ectoderm | 7.40e-12 | 95 |
presumptive ectoderm | 7.40e-12 | 95 |
central nervous system | 8.83e-12 | 73 |
brain grey matter | 1.00e-11 | 29 |
regional part of telencephalon | 1.00e-11 | 29 |
telencephalon | 1.00e-11 | 29 |
regional part of forebrain | 1.74e-11 | 39 |
forebrain | 1.74e-11 | 39 |
future forebrain | 1.74e-11 | 39 |
brain | 4.67e-11 | 47 |
future brain | 4.67e-11 | 47 |
nervous system | 1.24e-10 | 75 |
regional part of brain | 1.64e-10 | 46 |
cerebral cortex | 4.56e-07 | 21 |
cerebral hemisphere | 4.56e-07 | 21 |
pallium | 4.56e-07 | 21 |