FFCP PHASE1:Mm9::chr5:74038959..74038993,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:74038959..74038993,-
|short_description=p1@Sgcb
|description=CAGE_peak_1_at_Sgcb_5end
|association_with_transcript=0bp_to_ENSMUST00000087175,NM_011890,uc00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=24051 | |EntrezGene=24051 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=F8WIL1,P82349,Q9CYD9 | |UniProt=F8WIL1,P82349,Q9CYD9 | ||
|association_with_transcript=0bp_to_ENSMUST00000087175,NM_011890,uc008xtb.1_5end | |||
|cluster_id=chr5:74038959..74038993,- | |||
|description=CAGE_peak_1_at_Sgcb_5end | |||
|id=chr5:74038959..74038993,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@Sgcb | |||
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Latest revision as of 05:14, 26 September 2015
Short description: | p1@Sgcb |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sgcb_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 0bp_to_ENSMUST00000087175, NM_011890, uc008xtb.1_5end |
EntrezGene: | Sgcb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.78e-18 | 92 |
nervous system | 1.63e-13 | 75 |
ectoderm-derived structure | 2.28e-13 | 95 |
ectoderm | 2.28e-13 | 95 |
presumptive ectoderm | 2.28e-13 | 95 |
central nervous system | 1.34e-12 | 73 |
regional part of nervous system | 3.07e-11 | 54 |
neurectoderm | 1.20e-10 | 64 |
neural plate | 1.20e-10 | 64 |
presumptive neural plate | 1.20e-10 | 64 |
neural tube | 1.79e-10 | 52 |
neural rod | 1.79e-10 | 52 |
future spinal cord | 1.79e-10 | 52 |
neural keel | 1.79e-10 | 52 |
ecto-epithelium | 2.10e-10 | 73 |
brain | 1.60e-08 | 47 |
future brain | 1.60e-08 | 47 |
regional part of brain | 3.81e-08 | 46 |
primary circulatory organ | 9.84e-08 | 18 |
heart | 9.84e-08 | 18 |
primitive heart tube | 9.84e-08 | 18 |
primary heart field | 9.84e-08 | 18 |
anterior lateral plate mesoderm | 9.84e-08 | 18 |
heart tube | 9.84e-08 | 18 |
heart primordium | 9.84e-08 | 18 |
cardiac mesoderm | 9.84e-08 | 18 |
cardiogenic plate | 9.84e-08 | 18 |
heart rudiment | 9.84e-08 | 18 |
gray matter | 2.31e-07 | 34 |