FFCP PHASE1:Mm9::chr6:30701694..30701705,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:30701694..30701705,+
|short_description=p@chr6:30701694..30701705,+
|description=CAGE_peak_at_chr6:30701694..30701705,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:30701694..30701705,+ | |||
|description=CAGE_peak_at_chr6:30701694..30701705,+ | |||
|id=chr6:30701694..30701705,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.62e-07,3;CL:0002610,9.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.10e-13!52;UBERON:0005068!6.10e-13!52;UBERON:0006241!6.10e-13!52;UBERON:0007135!6.10e-13!52;UBERON:0002616!1.56e-12!49;UBERON:0000955!4.67e-12!50;UBERON:0006238!4.67e-12!50;UBERON:0000033!3.69e-11!63;UBERON:0002020!1.61e-10!34;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0002021!2.67e-10!10;UBERON:0000411!2.67e-10!10;UBERON:0001950!2.67e-10!10;UBERON:0003056!3.20e-10!49;UBERON:0000025!3.95e-10!114;UBERON:0001017!5.19e-10!73;UBERON:0005743!5.19e-10!73;UBERON:0003080!1.43e-09!40;UBERON:0000073!2.08e-09!75;UBERON:0001016!2.08e-09!75;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29;UBERON:0004111!2.17e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.21e-16,10;UBERON:0000411,6.21e-16,10;UBERON:0001950,6.21e-16,10;UBERON:0002020,1.39e-14,34;UBERON:0002619,2.46e-12,17;UBERON:0000073,3.92e-12,54;UBERON:0003528,2.10e-11,29;UBERON:0002791,2.10e-11,29;UBERON:0001893,2.10e-11,29;UBERON:0000956,7.68e-10,21;UBERON:0001869,7.68e-10,21;UBERON:0000203,7.68e-10,21;UBERON:0001049,6.32e-09,52;UBERON:0005068,6.32e-09,52;UBERON:0006241,6.32e-09,52;UBERON:0007135,6.32e-09,52;UBERON:0001017,2.07e-08,73;UBERON:0002780,3.79e-08,39;UBERON:0001890,3.79e-08,39;UBERON:0006240,3.79e-08,39;UBERON:0001016,3.96e-08,75;UBERON:0003080,6.53e-08,40;UBERON:0002257,2.62e-07,3;UBERON:0002346,6.43e-07,64;UBERON:0003075,6.43e-07,64;UBERON:0007284,6.43e-07,64;UBERON:0004684,9.60e-07,3;UBERON:0002275,9.60e-07,3 | |||
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| ||
|short_description=p@chr6:30701694..30701705,+ | |||
}} | }} |
Latest revision as of 13:43, 5 August 2015
Short description: | p@chr6:30701694..30701705, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30701694..30701705, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.62e-07 | 3 |
raphe nuclei neuron | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.21e-16 | 10 |
visual cortex | 6.21e-16 | 10 |
neocortex | 6.21e-16 | 10 |
gray matter | 1.39e-14 | 34 |
regional part of cerebral cortex | 2.46e-12 | 17 |
regional part of nervous system | 3.92e-12 | 54 |
brain grey matter | 2.10e-11 | 29 |
regional part of telencephalon | 2.10e-11 | 29 |
telencephalon | 2.10e-11 | 29 |
cerebral cortex | 7.68e-10 | 21 |
cerebral hemisphere | 7.68e-10 | 21 |
pallium | 7.68e-10 | 21 |
neural tube | 6.32e-09 | 52 |
neural rod | 6.32e-09 | 52 |
future spinal cord | 6.32e-09 | 52 |
neural keel | 6.32e-09 | 52 |
central nervous system | 2.07e-08 | 73 |
regional part of forebrain | 3.79e-08 | 39 |
forebrain | 3.79e-08 | 39 |
future forebrain | 3.79e-08 | 39 |
nervous system | 3.96e-08 | 75 |
anterior neural tube | 6.53e-08 | 40 |
ventral horn of spinal cord | 2.62e-07 | 3 |
neurectoderm | 6.43e-07 | 64 |
neural plate | 6.43e-07 | 64 |
presumptive neural plate | 6.43e-07 | 64 |
raphe nuclei | 9.60e-07 | 3 |
reticular formation | 9.60e-07 | 3 |