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FFCP PHASE1:Mm9::chr9:40077058..40077081,+: Difference between revisions

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(Created page with "{{FFCP |id=chr9:40077058..40077081,+ |short_description=p3@Scn3b |description=CAGE_peak_3_at_Scn3b_5end |association_with_transcript=256bp_to_ENSMUST00000049941_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chr9:40077058..40077081,+
|DHSsupport=NA
|short_description=p3@Scn3b
|DPIdataset=NA
|description=CAGE_peak_3_at_Scn3b_5end
|association_with_transcript=256bp_to_ENSMUST00000049941_5end
|EntrezGene=235281
|EntrezGene=235281
|HGNC=
|HGNC=
|MCL_coexpression_id=3400
|TSSclassifier=NA
|UniProt=Q8BHK2
|UniProt=Q8BHK2
|association_with_transcript=256bp_to_ENSMUST00000049941_5end
|cluster_id=chr9:40077058..40077081,+
|description=CAGE_peak_3_at_Scn3b_5end
|id=chr9:40077058..40077081,+
|ontology_enrichment_celltype=CL:0000540!5.02e-12!33;CL:0000047!5.02e-12!33;CL:0000031!5.02e-12!33;CL:0000404!5.02e-12!33;CL:0000117!2.85e-10!23;CL:0000337!2.85e-10!23;CL:0000393!1.16e-09!39;CL:0000211!1.16e-09!39;CL:0000221!5.54e-08!44;CL:0000133!5.54e-08!44;CL:0002319!6.09e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.84e-13,33;CL:0000047,1.84e-13,33;CL:0000031,1.84e-13,33;CL:0000404,1.84e-13,33;CL:0000117,1.10e-12,23;CL:0000337,1.10e-12,23;CL:0000393,1.27e-10,39;CL:0000211,1.27e-10,39;CL:0002319,4.41e-08,43;CL:0000221,1.07e-07,44;CL:0000133,1.07e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.85e-13!102;UBERON:0000924!1.85e-13!102;UBERON:0006601!1.85e-13!102;UBERON:0002346!4.47e-13!71;UBERON:0003075!4.47e-13!71;UBERON:0007284!4.47e-13!71;UBERON:0001017!4.24e-12!73;UBERON:0005743!4.24e-12!73;UBERON:0000073!6.00e-12!75;UBERON:0001016!6.00e-12!75;UBERON:0002020!5.09e-11!34;UBERON:0005157!1.40e-08!27;UBERON:0001049!1.74e-08!52;UBERON:0005068!1.74e-08!52;UBERON:0006241!1.74e-08!52;UBERON:0007135!1.74e-08!52;UBERON:0002791!4.35e-08!29;UBERON:0003528!4.35e-08!29;UBERON:0001893!4.35e-08!29;UBERON:0003056!4.50e-08!49;UBERON:0000033!6.33e-08!63;UBERON:0000955!2.52e-07!50;UBERON:0006238!2.52e-07!50;UBERON:0002616!5.52e-07!49;UBERON:0003080!7.59e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.77e-13,73;UBERON:0001016,3.97e-12,75;UBERON:0002020,3.04e-11,34;UBERON:0002346,1.02e-10,64;UBERON:0003075,1.02e-10,64;UBERON:0007284,1.02e-10,64;UBERON:0004121,1.43e-10,95;UBERON:0000924,1.43e-10,95;UBERON:0006601,1.43e-10,95;UBERON:0000073,4.10e-10,54;UBERON:0001049,6.11e-09,52;UBERON:0005068,6.11e-09,52;UBERON:0006241,6.11e-09,52;UBERON:0007135,6.11e-09,52;UBERON:0010371,7.97e-09,73;UBERON:0003056,6.74e-08,49;UBERON:0010314,7.40e-08,92;UBERON:0003528,1.09e-07,29;UBERON:0002791,1.09e-07,29;UBERON:0001893,1.09e-07,29
|phase1_expression=1.44133962394315,0,1.36499771816861,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,2.37018355954478,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,1.54701627683233,10.5204559646991,4.7609188134483,17.1134478946668,0,0,0,0,0,0.299600110518405,0,0.829516898467821,1.21505344498522,2.3135745748652,6.28432165688368,11.7060326704355,1.83736198822431,1.34183659425531,0,3.30347642998166,3.31987079021488,7.98753972932466,7.12185953743047,6.95306091378313,7.29278718779464,2.51264699101243,4.50210088025344,5.65353516774197,13.5529149317887,14.6642831223076,9.50637173709033,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.776813650941515,1.03909497345377,3.99016251562112,4.26251669636998,4.61230994512117,7.53613202763113,6.46737889246376,0.376999773989026,0,0.289198713839823,0,2.26473589926373,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0,2.09706895166752,1.83000241127451,3.5183218591602,1.39059456153821,2.81287003063364,3.74018480207208,2.75810147215188,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,2.29902104433473,4.68161537493908,2.86339153887859,3.26575195926374,3.84341160854549,2.24884138943349,0.776110112217047,0,0,0,2.19195732427575,0,2.43776516565517,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.878200461164203,0.134206418760372,7.99101804543684,4.83651678182637,0,0,0.853153002140936,0.928946687441754,0.77320476793256,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0,0.189667900953082,2.39921876480431,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,1.48856379067401,0,0,0,0,20.6923572986597,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,5.3602002381381,14.7587057349329,12.4885534628991,22.2265553189729,28.3474802750432,51.0255259703959,44.7346849173965,34.5369963731791,18.370430439852,0,0,0,0.551873492609465,1.76605648986571,1.64096361229084,0,0,4.10160685241134,0.780877488593277,2.36965737506079,0.955875191810208,1.33679204449436,1.41538265394416,1.21443210502468,3.50707029493574,1.58115111178609,3.53453448063988,0,1.06839362200353,0.325773918707152,0.494910368917606,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,2.10837217149998,0,0.340439605753788,0,0,0,0,1.07021290561242,1.64549020602121,0.608929898229199,0,0,0.220528398054962,0.16488625294148,1.45317984026315,0.361877549568935,0.119372344003136,0,0,1.8542530201051,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,1.21991680276109,0.756037385752609,1.04544148007234,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,3.95326289831947,4.60325236507177,2.29158205375759,2.40594455281163,0.685082519770642,1.5107877947794,3.37511250115903,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,1.19707462020309,1.19513524027894,2.91728060481953,1.46729213839588,0.735374033800057,4.00044110042907,4.94484137373346,4.81378814387723,3.03236654116557,4.05566879824384,3.2066478035633,2.24739617927718,2.88113185821912,3.61843454420364,5.71552429539688,3.24476112645595,3.47236596834669,4.53294490883637,2.50238164228475,1.37147700954166,3.72699192934609,2.38436189947321,3.19762116591123,3.95259397744389,3.55381353145041,4.20734337607377,2.36762740294059,3.39510284614654,3.36685362994643,2.84724043498018,2.9551344712669,4.50154147486658,4.49316839439301,3.66522560864169,3.49734809113124,3.74290573512653,6.01638951335235,4.59091996965224,2.42650561031467,1.15933917810211
|phase1_expression=1.44133962394315,0,1.36499771816861,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,2.37018355954478,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,1.54701627683233,10.5204559646991,4.7609188134483,17.1134478946668,0,0,0,0,0,0.299600110518405,0,0.829516898467821,1.21505344498522,2.3135745748652,6.28432165688368,11.7060326704355,1.83736198822431,1.34183659425531,0,3.30347642998166,3.31987079021488,7.98753972932466,7.12185953743047,6.95306091378313,7.29278718779464,2.51264699101243,4.50210088025344,5.65353516774197,13.5529149317887,14.6642831223076,9.50637173709033,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.776813650941515,1.03909497345377,3.99016251562112,4.26251669636998,4.61230994512117,7.53613202763113,6.46737889246376,0.376999773989026,0,0.289198713839823,0,2.26473589926373,0.220841518460394,0,0,0.878342391034642,0,0,0,0,0,2.09706895166752,1.83000241127451,3.5183218591602,1.39059456153821,2.81287003063364,3.74018480207208,2.75810147215188,0.407357455401265,0.124406970610093,0.252722758433675,0,0.130120442962704,2.29902104433473,4.68161537493908,2.86339153887859,3.26575195926374,3.84341160854549,2.24884138943349,0.776110112217047,0,0,0,2.19195732427575,0,2.43776516565517,0.823128545631774,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0.878200461164203,0.134206418760372,7.99101804543684,4.83651678182637,0,0,0.853153002140936,0.928946687441754,0.77320476793256,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0,0.189667900953082,2.39921876480431,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,1.48856379067401,0,0,0,0,20.6923572986597,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,5.3602002381381,14.7587057349329,12.4885534628991,22.2265553189729,28.3474802750432,51.0255259703959,44.7346849173965,34.5369963731791,18.370430439852,0,0,0,0.551873492609465,1.76605648986571,1.64096361229084,0,0,4.10160685241134,0.780877488593277,2.36965737506079,0.955875191810208,1.33679204449436,1.41538265394416,1.21443210502468,3.50707029493574,1.58115111178609,3.53453448063988,0,1.06839362200353,0.325773918707152,0.494910368917606,1.32745138339963,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,2.10837217149998,0,0.340439605753788,0,0,0,0,1.07021290561242,1.64549020602121,0.608929898229199,0,0,0.220528398054962,0.16488625294148,1.45317984026315,0.361877549568935,0.119372344003136,0,0,1.8542530201051,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,1.21991680276109,0.756037385752609,1.04544148007234,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,3.95326289831947,4.60325236507177,2.29158205375759,2.40594455281163,0.685082519770642,1.5107877947794,3.37511250115903,1.35096360967266,0.906284817968409,1.55328093525546,0.31136204275253,1.19707462020309,1.19513524027894,2.91728060481953,1.46729213839588,0.735374033800057,4.00044110042907,4.94484137373346,4.81378814387723,3.03236654116557,4.05566879824384,3.2066478035633,2.24739617927718,2.88113185821912,3.61843454420364,5.71552429539688,3.24476112645595,3.47236596834669,4.53294490883637,2.50238164228475,1.37147700954166,3.72699192934609,2.38436189947321,3.19762116591123,3.95259397744389,3.55381353145041,4.20734337607377,2.36762740294059,3.39510284614654,3.36685362994643,2.84724043498018,2.9551344712669,4.50154147486658,4.49316839439301,3.66522560864169,3.49734809113124,3.74290573512653,6.01638951335235,4.59091996965224,2.42650561031467,1.15933917810211
|short_description=p3@Scn3b
}}
}}

Latest revision as of 15:04, 26 September 2015

Short description:p3@Scn3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scn3b_5end
Coexpression cluster:MCL_coexpression_mm9:3400
Association with transcript: 256bp_to_ENSMUST00000049941_5end
EntrezGene:Scn3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scn3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B120.69
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E522.23
lung, neonate N07.CNhs11111.715-19A328.35
lung, neonate N10.CNhs11219.750-23E651.03
lung, neonate N20.CNhs11109.822-18A444.73
lung, neonate N25.CNhs11119.1359-25C734.54
lung, neonate N30.CNhs11133.1394-42H218.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.84e-1333
neuronal stem cell1.84e-1333
neuroblast1.84e-1333
electrically signaling cell1.84e-1333
CNS neuron (sensu Vertebrata)1.10e-1223
neuroblast (sensu Vertebrata)1.10e-1223
electrically responsive cell1.27e-1039
electrically active cell1.27e-1039
neural cell4.41e-0843
ectodermal cell1.07e-0744
neurectodermal cell1.07e-0744
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