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{{f5samples
{{f5samples
|id=FF:10764-110E8
|DRA_sample_Accession=CAGE@SAMD00004882
|name=acute myeloid leukemia (FAB M5) cell line:NOMO-1
|accession_numbers=CAGE;DRX007811;DRR008683;DRZ000108;DRZ001493;DRZ011458;DRZ012843
|sample_id=10764
|ancestors_in_anatomy_facet=
|rna_tube_id=110E8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
|rna_box=110
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|rna_position=E8
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0101883,FF:0100740
|sample_cell_lot=
|comment=
|sample_cell_catalog=ifo50474
|created_by=
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr13:72441315..72441454,-!p1@DACH1!2.36!436.07!DACH1;;chr16:85932760..85932775,+!p1@IRF8!2.21!161.40!IRF8;;chr7:27192185..27192209,-!p1@HOXA3!2.21!161.40!HOXA3;;chr11:47400078..47400106,-!p1@SPI1!2.18!149.90!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.15!166.08!MYB;;chr7:96654133..96654150,-!p1@DLX5!2.12!130.73!DLX5;;chr7:50344289..50344323,+!p1@IKZF1!1.98!94.54!IKZF1;;chr7:27205136..27205164,-!p1@HOXA9!1.95!89.00!HOXA9;;chr2:68592406..68592424,+!p1@PLEK!1.95!87.72!PLEK;;chr3:189349162..189349207,+!p2@TP63!1.94!86.45!TP63;;chr6:135502408..135502459,+!p2@MYB!1.83!76.23!MYB;;chr12:54694758..54694805,-!p1@NFE2!1.74!65.15!NFE2;;chr18:55102628..55102646,+!p2@ONECUT2!1.73!52.80!ONECUT2;;chr18:55102598..55102623,+!p1@ONECUT2!1.68!46.84!ONECUT2;;chr19:33793430..33793447,-!p1@CEBPA!1.67!185.67!CEBPA;;chr7:27205106..27205134,-!p2@HOXA9!1.63!41.31!HOXA9;;chr2:100759037..100759058,-!p2@AFF3!1.58!36.62!AFF3;;chr1:92951607..92951661,-!p1@GFI1!1.53!32.79!GFI1;;chr16:54320617..54320643,-!p3@IRX3!1.52!41.31!IRX3;;chr13:72441074..72441172,-!p2@DACH1!1.51!31.51!DACH1;;chr10:31288398..31288455,-!p2@ZNF438!1.50!35.35!ZNF438;;chr16:54320646..54320672,-!p2@IRX3!1.49!45.14!IRX3;;chr7:115670804..115670825,-!p1@TFEC!1.48!28.96!TFEC;;chr5:88178983..88179012,-!p1@MEF2C!1.45!203.13!MEF2C;;chr19:13213662..13213686,-!p1@LYL1!1.44!38.75!LYL1;;chr7:27224842..27224872,-!p1@HOXA11!1.43!25.98!HOXA11;;chr18:22932080..22932170,-!p1@ZNF521!1.42!104.76!ZNF521;;chr7:27213893..27213954,-!p1@HOXA10!1.40!24.27!HOXA10;;chr12:54785074..54785122,-!p2@ZNF385A!1.36!33.22!ZNF385A;;chr11:47399996..47400014,-!p4@SPI1!1.35!21.29!SPI1;;chr7:27196217..27196246,-!p2@HOXA7!1.32!20.01!HOXA7;;chr12:54694807..54694832,-!p3@NFE2!1.31!19.59!NFE2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.59!ZBED1;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.42!SATB1;;chr2:100759010..100759035,-!p1@AFF3!1.30!19.16!AFF3;;chr16:54319010..54319041,-!p8@IRX3!1.29!18.31!IRX3;;chr18:77155922..77155939,+!p1@NFATC1!1.28!48.55!NFATC1;;chr12:54785054..54785072,-!p4@ZNF385A!1.28!20.44!ZNF385A;;chr6:29648890..29648944,-!p1@ZFP57!1.28!17.89!ZFP57;;chr7:96654026..96654061,-!p2@DLX5!1.28!17.89!DLX5;;chr6:15246200..15246214,+!p2@JARID2!1.27!48.55!JARID2;;chr7:27224795..27224840,-!p2@HOXA11!1.27!17.46!HOXA11;;chr2:145277640..145277771,-!p1@ZEB2!1.25!220.16!ZEB2;;chr5:321810..321877,+!p1@AHRR!1.25!53.23!AHRR;;chr16:54320675..54320715,-!p1@IRX3!1.25!36.20!IRX3;;chr20:50159198..50159299,-!p1@NFATC2!1.23!23.42!NFATC2;;chr11:47400062..47400077,-!p2@SPI1!1.21!15.33!SPI1;;chr18:22932004..22932021,-!p2@ZNF521!1.18!14.05!ZNF521;;chr21:34442439..34442455,+!p1@OLIG1!1.17!13.63!OLIG1;;chr6:135502472..135502489,+!p3@MYB!1.17!13.63!MYB;;chr11:65554528..65554546,+!p1@OVOL1!1.14!12.78!OVOL1;;chr11:47399947..47399961,-!p3@SPI1!1.13!12.35!SPI1;;chr1:3569072..3569093,+!p1@TP73!1.13!12.35!TP73;;chr5:88179195..88179224,-!p3@MEF2C!1.11!19.16!MEF2C;;chr7:27205043..27205050,-!p5@HOXA9!1.11!11.92!HOXA9;;chr7:50343634..50343717,+!p2@IKZF1!1.11!11.92!IKZF1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.92!IKZF1;;chr6:144385698..144385742,-!p2@PLAGL1!1.09!13.63!PLAGL1;;chrX:101975643..101975683,+!p1@BHLHB9!1.08!24.70!BHLHB9;;chr1:92949331..92949377,-!p2@GFI1!1.08!11.07!GFI1;;chr21:34442540..34442560,+!p2@OLIG1!1.08!11.07!OLIG1;;chr5:88179017..88179046,-!p2@MEF2C!1.06!42.16!MEF2C;;chr6:45390002..45390023,+!p6@RUNX2!1.04!17.46!RUNX2;;chr11:2292226..2292270,-!p1@ASCL2!1.03!9.79!ASCL2;;chr11:47400032..47400043,-!p5@SPI1!1.03!9.79!SPI1;;chr8:57123815..57123867,-!p1@PLAG1!1.00!37.47!PLAG1;;chr7:137620684..137620711,-!p4@CREB3L2!1.00!8.94!CREB3L2;;chr2:102091566..102091581,-!p1@RFX8!1.00!8.94!RFX8;;chr13:72440901..72440968,-!p4@DACH1!1.00!8.94!DACH1;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.09!RUNX1;;chr19:13213704..13213726,-!p3@LYL1!0.98!11.50!LYL1;;chr18:22931979..22931992,-!p3@ZNF521!0.98!8.52!ZNF521;;chr20:42295745..42295765,+!p1@MYBL2!0.96!135.84!MYBL2;;chr13:41593425..41593480,-!p1@ELF1!0.96!53.66!ELF1;;chr11:47400045..47400060,-!p6@SPI1!0.96!8.09!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!0.96!8.09!ZNF385A;;chr4:87857491..87857519,+!p10@AFF1!0.95!11.07!AFF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!124.35!MIS18BP1;;chr4:87857474..87857489,+!p7@AFF1!0.94!13.63!AFF1;;chr1:156470515..156470542,-!p2@MEF2D!0.92!40.03!MEF2D;;chr6:34204973..34204990,+!p4@HMGA1!0.91!99.65!HMGA1;;chr10:51572408..51572454,+!p3@NCOA4!0.91!43.44!NCOA4;;chr6:45390025..45390076,+!p2@RUNX2!0.91!17.89!RUNX2;;chr1:25291475..25291511,-!p2@RUNX3!0.89!6.81!RUNX3;;chr19:45579725..45579743,-!p1@ZNF296!0.87!30.24!ZNF296;;chr10:51572339..51572376,+!p4@NCOA4!0.87!14.90!NCOA4;;chr12:54694653..54694672,-!p2@NFE2!0.87!6.39!NFE2;;chr19:13213954..13214021,-!p4@LYL1!0.87!6.39!LYL1;;chr2:68592394..68592405,+!p2@PLEK!0.87!6.39!PLEK;;chr3:189348969..189349018,+!p4@TP63!0.87!6.39!TP63;;chr3:129158715..129158766,-!p2@MBD4!0.86!63.88!MBD4;;chr6:45390269..45390298,+!p5@RUNX2!0.86!10.65!RUNX2;;chr7:128577972..128578047,+!p1@IRF5!0.85!9.79!IRF5;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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000049,CL:0000134
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=unknown
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=2.11
|rna_od260/280=2.09
|sample_cell_type=myeloid progenitor cell
|sample_cell_line=NOMO-1
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=acute myeloid leukemia (FAB M5)
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=85.1805
|rna_concentration=1.8929
|sample_note=
|profile_hcage=CNhs13050,LSID1000,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000763,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
|sample_description=
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg38.nobarcode.ctss.bed.gz
|id=FF:10764-110E8
|is_a=EFO:0002091;;FF:0000210;;FF:0101883
|is_obsolete=
|library_id=CNhs13050
|library_id_phase_based=2:CNhs13050
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10764
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10764
|name=acute myeloid leukemia (FAB M5) cell line:NOMO-1
|namespace=FANTOM5
|part_of=
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|profile_hcage=CNhs13050,LSID1000,release012,COMPLETED
|profile_rnaseq=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=110
|rna_catalog_number=
|rna_concentration=1.8929
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.11
|rna_od260/280=2.09
|rna_position=E8
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.10E+10
|rna_weight_ug=85.1805
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=ifo50474
|sample_cell_line=NOMO-1
|sample_cell_lot=
|sample_cell_type=myeloid progenitor cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
|sample_dev_stage=
|sample_disease=acute myeloid leukemia (FAB M5)
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.24899169804867e-239!GO:0043227;membrane-bound organelle;6.89924221440866e-205!GO:0043231;intracellular membrane-bound organelle;1.34987679493459e-204!GO:0043226;organelle;1.54361994667191e-194!GO:0043229;intracellular organelle;6.81157581592105e-194!GO:0005737;cytoplasm;2.36907785837301e-165!GO:0044422;organelle part;9.79590883562567e-142!GO:0044446;intracellular organelle part;8.62366357207484e-140!GO:0044444;cytoplasmic part;4.1532504883578e-117!GO:0032991;macromolecular complex;5.08313387402054e-103!GO:0044237;cellular metabolic process;4.78910815238374e-100!GO:0044238;primary metabolic process;3.29964741459396e-96!GO:0005634;nucleus;2.52429046180308e-93!GO:0043170;macromolecule metabolic process;2.16063114885915e-89!GO:0030529;ribonucleoprotein complex;3.86728148065135e-86!GO:0044428;nuclear part;1.51903060681342e-84!GO:0003723;RNA binding;1.35485102772151e-78!GO:0043233;organelle lumen;8.63023774082442e-78!GO:0031974;membrane-enclosed lumen;8.63023774082442e-78!GO:0005739;mitochondrion;2.60056165429057e-68!GO:0005515;protein binding;1.29867378763208e-63!GO:0006412;translation;1.43557220427892e-54!GO:0043283;biopolymer metabolic process;1.59409476042553e-53!GO:0006396;RNA processing;4.6077504530908e-53!GO:0043234;protein complex;4.6728126919078e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.04444987940733e-49!GO:0005840;ribosome;1.22276193972591e-48!GO:0031981;nuclear lumen;4.02540039824312e-48!GO:0044429;mitochondrial part;2.65267207788351e-46!GO:0006259;DNA metabolic process;5.01401899652915e-46!GO:0019538;protein metabolic process;1.48665208229453e-45!GO:0010467;gene expression;4.03605601627257e-45!GO:0031967;organelle envelope;1.82663265308253e-44!GO:0016071;mRNA metabolic process;1.89458366350805e-44!GO:0031975;envelope;4.44431832700491e-44!GO:0009058;biosynthetic process;7.46362243975373e-44!GO:0031090;organelle membrane;1.43317192485872e-42!GO:0044249;cellular biosynthetic process;1.94166757778665e-42!GO:0003735;structural constituent of ribosome;1.94166757778665e-42!GO:0016043;cellular component organization and biogenesis;4.31239031544293e-42!GO:0033036;macromolecule localization;9.9509632922649e-42!GO:0044260;cellular macromolecule metabolic process;5.09865860003877e-41!GO:0044267;cellular protein metabolic process;5.46553838333249e-41!GO:0009059;macromolecule biosynthetic process;8.83109108533762e-41!GO:0008380;RNA splicing;1.06681898507761e-38!GO:0015031;protein transport;1.21263291982595e-38!GO:0006397;mRNA processing;5.20317397741844e-38!GO:0033279;ribosomal subunit;1.13825965942026e-37!GO:0045184;establishment of protein localization;2.7331117711433e-37!GO:0008104;protein localization;7.00067919964189e-37!GO:0006996;organelle organization and biogenesis;9.41255676951942e-36!GO:0005829;cytosol;4.69795955908851e-35!GO:0065003;macromolecular complex assembly;2.07427004310167e-34!GO:0007049;cell cycle;3.57383072486198e-33!GO:0046907;intracellular transport;2.28923693194104e-32!GO:0005654;nucleoplasm;5.32457177757785e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.22044569196537e-32!GO:0043228;non-membrane-bound organelle;1.14029173962957e-31!GO:0043232;intracellular non-membrane-bound organelle;1.14029173962957e-31!GO:0003676;nucleic acid binding;5.44354549662511e-31!GO:0000166;nucleotide binding;1.46119535701786e-30!GO:0022607;cellular component assembly;8.41836158338632e-30!GO:0005740;mitochondrial envelope;3.47288379476552e-28!GO:0019866;organelle inner membrane;3.83443655685834e-28!GO:0005681;spliceosome;1.1246156271954e-27!GO:0006886;intracellular protein transport;1.54889222061047e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.47356830981517e-27!GO:0005694;chromosome;1.27067304605914e-26!GO:0031966;mitochondrial membrane;1.83816159317853e-26!GO:0006974;response to DNA damage stimulus;1.97306193169179e-26!GO:0044451;nucleoplasm part;9.45373018173874e-26!GO:0005743;mitochondrial inner membrane;1.78623247214276e-25!GO:0022402;cell cycle process;4.53804354010945e-25!GO:0051649;establishment of cellular localization;8.65973013789867e-25!GO:0051641;cellular localization;4.0863990160547e-24!GO:0051276;chromosome organization and biogenesis;5.81650916422616e-24!GO:0044445;cytosolic part;8.69866085904905e-24!GO:0044427;chromosomal part;1.44397712433743e-23!GO:0006281;DNA repair;7.75056019748937e-23!GO:0031980;mitochondrial lumen;4.22561919872143e-22!GO:0005759;mitochondrial matrix;4.22561919872143e-22!GO:0000278;mitotic cell cycle;3.32407292843454e-21!GO:0006119;oxidative phosphorylation;4.12878532909406e-21!GO:0032553;ribonucleotide binding;4.58081854097627e-21!GO:0032555;purine ribonucleotide binding;4.58081854097627e-21!GO:0017076;purine nucleotide binding;7.41431990851895e-21!GO:0016070;RNA metabolic process;1.19457338720059e-20!GO:0015934;large ribosomal subunit;1.849612799327e-20!GO:0005524;ATP binding;2.54479672331067e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.66720076960302e-20!GO:0032559;adenyl ribonucleotide binding;4.38441564403682e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;4.38441564403682e-20!GO:0016462;pyrophosphatase activity;4.86801521739469e-20!GO:0030554;adenyl nucleotide binding;1.26780889331867e-19!GO:0044455;mitochondrial membrane part;1.54162155970152e-19!GO:0017111;nucleoside-triphosphatase activity;1.97380276472092e-19!GO:0006260;DNA replication;2.99378581617839e-19!GO:0022618;protein-RNA complex assembly;3.81387449166675e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;4.84793060567857e-19!GO:0044265;cellular macromolecule catabolic process;7.32399037848945e-19!GO:0022403;cell cycle phase;1.40207175606788e-18!GO:0015935;small ribosomal subunit;2.56709038951023e-18!GO:0016874;ligase activity;3.1858537470667e-18!GO:0006323;DNA packaging;3.42037514663687e-18!GO:0009719;response to endogenous stimulus;3.03372354568597e-17!GO:0008135;translation factor activity, nucleic acid binding;4.18281497824899e-17!GO:0005635;nuclear envelope;6.91410908205956e-17!GO:0044248;cellular catabolic process;8.10163267147651e-17!GO:0006457;protein folding;1.35162121149909e-16!GO:0048770;pigment granule;1.5218975349591e-16!GO:0042470;melanosome;1.5218975349591e-16!GO:0005730;nucleolus;2.03692973356031e-16!GO:0000087;M phase of mitotic cell cycle;2.33023867463253e-16!GO:0012505;endomembrane system;2.56197213616264e-16!GO:0007067;mitosis;3.83310669003719e-16!GO:0005746;mitochondrial respiratory chain;5.91270093065422e-16!GO:0000279;M phase;1.04105387837078e-15!GO:0016887;ATPase activity;1.5823458517558e-15!GO:0006512;ubiquitin cycle;1.75630294256736e-15!GO:0043285;biopolymer catabolic process;2.84459597209831e-15!GO:0051301;cell division;3.1687284083566e-15!GO:0051186;cofactor metabolic process;3.42621418554533e-15!GO:0006915;apoptosis;5.02213683951016e-15!GO:0000502;proteasome complex (sensu Eukaryota);5.5640754027887e-15!GO:0012501;programmed cell death;5.77271426485426e-15!GO:0031965;nuclear membrane;5.84660823349924e-15!GO:0006605;protein targeting;7.85577166429736e-15!GO:0009057;macromolecule catabolic process;8.13126973774618e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.09198076022562e-14!GO:0019941;modification-dependent protein catabolic process;1.11461967853573e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.11461967853573e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.12249867757102e-14!GO:0008134;transcription factor binding;1.50783922176426e-14!GO:0043412;biopolymer modification;1.64003370046777e-14!GO:0042623;ATPase activity, coupled;1.72399392396882e-14!GO:0016604;nuclear body;1.97138501710666e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.01338118321633e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.3799493675693e-14!GO:0000375;RNA splicing, via transesterification reactions;2.3799493675693e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.3799493675693e-14!GO:0044257;cellular protein catabolic process;2.98713905046552e-14!GO:0006913;nucleocytoplasmic transport;3.20589632096181e-14!GO:0044453;nuclear membrane part;3.21479214071709e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.65780274557668e-14!GO:0003954;NADH dehydrogenase activity;3.65780274557668e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.65780274557668e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.92218849287195e-14!GO:0005761;mitochondrial ribosome;5.87297887482515e-14!GO:0000313;organellar ribosome;5.87297887482515e-14!GO:0051169;nuclear transport;6.28752468599233e-14!GO:0016568;chromatin modification;7.6888312386193e-14!GO:0008219;cell death;1.00479236596182e-13!GO:0016265;death;1.00479236596182e-13!GO:0042254;ribosome biogenesis and assembly;1.19353047039851e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.05994995441252e-13!GO:0050657;nucleic acid transport;2.34347998976259e-13!GO:0051236;establishment of RNA localization;2.34347998976259e-13!GO:0050658;RNA transport;2.34347998976259e-13!GO:0006403;RNA localization;2.72135844563787e-13!GO:0051082;unfolded protein binding;3.7939286969292e-13!GO:0051726;regulation of cell cycle;4.90915286018211e-13!GO:0000074;regulation of progression through cell cycle;7.51849769169031e-13!GO:0006732;coenzyme metabolic process;1.43737305066971e-12!GO:0006446;regulation of translational initiation;1.43737305066971e-12!GO:0006333;chromatin assembly or disassembly;2.30321541418392e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.45136569862861e-12!GO:0042773;ATP synthesis coupled electron transport;2.45136569862861e-12!GO:0004386;helicase activity;2.61527936818296e-12!GO:0006464;protein modification process;2.98246393164068e-12!GO:0006413;translational initiation;3.01245077770705e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.01245077770705e-12!GO:0045271;respiratory chain complex I;3.01245077770705e-12!GO:0005747;mitochondrial respiratory chain complex I;3.01245077770705e-12!GO:0003743;translation initiation factor activity;3.22865657143908e-12!GO:0000785;chromatin;3.3682477451235e-12!GO:0005643;nuclear pore;7.53865295413824e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.84308991463982e-12!GO:0044432;endoplasmic reticulum part;1.03136034512842e-11!GO:0016192;vesicle-mediated transport;1.3630102684692e-11!GO:0051028;mRNA transport;1.53488885749553e-11!GO:0043687;post-translational protein modification;1.82639889730089e-11!GO:0016607;nuclear speck;1.99821105947834e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.26293824667847e-11!GO:0030163;protein catabolic process;4.50184427212538e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.72803972009479e-11!GO:0006261;DNA-dependent DNA replication;4.72803972009479e-11!GO:0048193;Golgi vesicle transport;6.03987352364825e-11!GO:0006399;tRNA metabolic process;1.55036599459e-10!GO:0005783;endoplasmic reticulum;1.89869415208235e-10!GO:0065002;intracellular protein transport across a membrane;2.11202527364259e-10!GO:0008026;ATP-dependent helicase activity;2.19830015440624e-10!GO:0065004;protein-DNA complex assembly;3.50547408557578e-10!GO:0016787;hydrolase activity;4.50660667474536e-10!GO:0017038;protein import;5.03677956674247e-10!GO:0006163;purine nucleotide metabolic process;7.19213328823179e-10!GO:0009259;ribonucleotide metabolic process;8.21146443462164e-10!GO:0006164;purine nucleotide biosynthetic process;1.19964763358413e-09!GO:0006461;protein complex assembly;1.24924367503551e-09!GO:0009056;catabolic process;1.5463164254173e-09!GO:0046930;pore complex;1.57502580434011e-09!GO:0043566;structure-specific DNA binding;1.62890067270036e-09!GO:0006364;rRNA processing;1.83548373152943e-09!GO:0000775;chromosome, pericentric region;1.93251032954083e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.42716399014199e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.42716399014199e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.42716399014199e-09!GO:0042981;regulation of apoptosis;2.63390534504458e-09!GO:0009055;electron carrier activity;3.66761970339034e-09!GO:0009260;ribonucleotide biosynthetic process;3.93366890374011e-09!GO:0009150;purine ribonucleotide metabolic process;4.06554278574247e-09!GO:0016072;rRNA metabolic process;4.44384256690565e-09!GO:0043067;regulation of programmed cell death;4.61607764706807e-09!GO:0051246;regulation of protein metabolic process;4.93731521066738e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.14891362042542e-09!GO:0051188;cofactor biosynthetic process;5.20782859996113e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;5.23984841316344e-09!GO:0043038;amino acid activation;5.34690634999267e-09!GO:0006418;tRNA aminoacylation for protein translation;5.34690634999267e-09!GO:0043039;tRNA aminoacylation;5.34690634999267e-09!GO:0009152;purine ribonucleotide biosynthetic process;6.55789318025193e-09!GO:0005773;vacuole;8.93594155585385e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.0553703991181e-09!GO:0005789;endoplasmic reticulum membrane;9.83567378639218e-09!GO:0003697;single-stranded DNA binding;1.00502185293965e-08!GO:0005794;Golgi apparatus;1.22236946870171e-08!GO:0003712;transcription cofactor activity;1.24153999079682e-08!GO:0006793;phosphorus metabolic process;1.25992762451467e-08!GO:0006796;phosphate metabolic process;1.25992762451467e-08!GO:0009060;aerobic respiration;1.26643326023531e-08!GO:0008639;small protein conjugating enzyme activity;1.55542191974161e-08!GO:0008565;protein transporter activity;1.76838850646431e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.43685046854114e-08!GO:0000323;lytic vacuole;2.54122402962453e-08!GO:0005764;lysosome;2.54122402962453e-08!GO:0031497;chromatin assembly;2.85943352464673e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.97071021824083e-08!GO:0006334;nucleosome assembly;2.98559121938756e-08!GO:0004842;ubiquitin-protein ligase activity;3.10306054672204e-08!GO:0015986;ATP synthesis coupled proton transport;4.05093249609255e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.05093249609255e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.42764293849759e-08!GO:0005813;centrosome;6.18324314317283e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.3990752250812e-08!GO:0045333;cellular respiration;9.63965525333914e-08!GO:0016779;nucleotidyltransferase activity;9.84499001312078e-08!GO:0016740;transferase activity;1.10175039790236e-07!GO:0019829;cation-transporting ATPase activity;1.16780550760569e-07!GO:0005768;endosome;1.24177598135266e-07!GO:0005815;microtubule organizing center;1.33337100901658e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.40229362936131e-07!GO:0019787;small conjugating protein ligase activity;1.53741911650879e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.58853038695838e-07!GO:0006366;transcription from RNA polymerase II promoter;2.04987199977515e-07!GO:0032446;protein modification by small protein conjugation;2.40473346630872e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.41124607613721e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.41124607613721e-07!GO:0006916;anti-apoptosis;2.48855120961056e-07!GO:0005819;spindle;2.73535851378593e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.76030918509157e-07!GO:0009141;nucleoside triphosphate metabolic process;2.99844763950764e-07!GO:0030120;vesicle coat;3.42810850358144e-07!GO:0030662;coated vesicle membrane;3.42810850358144e-07!GO:0006099;tricarboxylic acid cycle;3.42810850358144e-07!GO:0046356;acetyl-CoA catabolic process;3.42810850358144e-07!GO:0016567;protein ubiquitination;3.46191494293792e-07!GO:0051170;nuclear import;3.46740335723428e-07!GO:0006754;ATP biosynthetic process;3.63143678316054e-07!GO:0006753;nucleoside phosphate metabolic process;3.63143678316054e-07!GO:0009108;coenzyme biosynthetic process;3.73274631252399e-07!GO:0015630;microtubule cytoskeleton;3.7688037113148e-07!GO:0008094;DNA-dependent ATPase activity;3.77702663724589e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.77822790993178e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.77822790993178e-07!GO:0043069;negative regulation of programmed cell death;3.77822790993178e-07!GO:0005793;ER-Golgi intermediate compartment;3.77822790993178e-07!GO:0048475;coated membrane;4.20463955334699e-07!GO:0030117;membrane coat;4.20463955334699e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.25555310679146e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.25555310679146e-07!GO:0005657;replication fork;4.38042697310286e-07!GO:0043066;negative regulation of apoptosis;4.42871549195609e-07!GO:0006084;acetyl-CoA metabolic process;5.73875644484422e-07!GO:0016310;phosphorylation;5.91135075640744e-07!GO:0046034;ATP metabolic process;6.15621876080983e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.23877436807763e-07!GO:0006606;protein import into nucleus;6.93830153116038e-07!GO:0004298;threonine endopeptidase activity;8.95117221661497e-07!GO:0000245;spliceosome assembly;1.17581712947465e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.19279708078737e-06!GO:0051168;nuclear export;1.41791339337119e-06!GO:0009117;nucleotide metabolic process;1.47778825389774e-06!GO:0045259;proton-transporting ATP synthase complex;1.80935030465788e-06!GO:0050794;regulation of cellular process;1.87716250812472e-06!GO:0009109;coenzyme catabolic process;1.91071118451291e-06!GO:0003713;transcription coactivator activity;2.0845034709684e-06!GO:0000075;cell cycle checkpoint;2.28765538374257e-06!GO:0007005;mitochondrion organization and biogenesis;2.42850010267074e-06!GO:0051329;interphase of mitotic cell cycle;2.48907799027105e-06!GO:0006752;group transfer coenzyme metabolic process;2.73448841142964e-06!GO:0016881;acid-amino acid ligase activity;2.98230480428484e-06!GO:0016563;transcription activator activity;3.27054737338693e-06!GO:0006401;RNA catabolic process;3.27054737338693e-06!GO:0045786;negative regulation of progression through cell cycle;3.75868162152663e-06!GO:0048523;negative regulation of cellular process;3.94846660392891e-06!GO:0006950;response to stress;4.19143263174138e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.36720923049072e-06!GO:0006310;DNA recombination;5.26036017968192e-06!GO:0005762;mitochondrial large ribosomal subunit;5.40117603495308e-06!GO:0000315;organellar large ribosomal subunit;5.40117603495308e-06!GO:0006302;double-strand break repair;5.41913829050928e-06!GO:0051325;interphase;5.45064857825925e-06!GO:0051187;cofactor catabolic process;5.509758039388e-06!GO:0005667;transcription factor complex;6.66052810375958e-06!GO:0016491;oxidoreductase activity;6.81682044831038e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.24500471178835e-06!GO:0043623;cellular protein complex assembly;9.68643509039852e-06!GO:0003690;double-stranded DNA binding;9.8530878923652e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.50343321146505e-05!GO:0003724;RNA helicase activity;1.50641571429489e-05!GO:0005798;Golgi-associated vesicle;1.53441473260428e-05!GO:0007051;spindle organization and biogenesis;1.58357255320871e-05!GO:0005770;late endosome;2.12161913369021e-05!GO:0019222;regulation of metabolic process;2.60135821210411e-05!GO:0016363;nuclear matrix;2.76311698781318e-05!GO:0006613;cotranslational protein targeting to membrane;3.26924800216195e-05!GO:0051427;hormone receptor binding;4.56912917473555e-05!GO:0003684;damaged DNA binding;4.80128512158335e-05!GO:0003682;chromatin binding;5.54521081691611e-05!GO:0003729;mRNA binding;5.7817776024077e-05!GO:0031982;vesicle;5.85715007835582e-05!GO:0032508;DNA duplex unwinding;6.16324543612878e-05!GO:0032392;DNA geometric change;6.16324543612878e-05!GO:0000151;ubiquitin ligase complex;6.26726547683826e-05!GO:0008654;phospholipid biosynthetic process;6.28662418345809e-05!GO:0031988;membrane-bound vesicle;6.34425853848385e-05!GO:0042802;identical protein binding;6.50860887155908e-05!GO:0000776;kinetochore;6.90529624082982e-05!GO:0007059;chromosome segregation;7.21756253868222e-05!GO:0006091;generation of precursor metabolites and energy;7.25792648963829e-05!GO:0006268;DNA unwinding during replication;7.9058590924205e-05!GO:0048519;negative regulation of biological process;8.31143343385066e-05!GO:0035257;nuclear hormone receptor binding;9.28460941077498e-05!GO:0006414;translational elongation;9.37523432574495e-05!GO:0006417;regulation of translation;0.0001008014813961!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00011732431785731!GO:0003899;DNA-directed RNA polymerase activity;0.000118221231337908!GO:0003678;DNA helicase activity;0.000120953886803588!GO:0043021;ribonucleoprotein binding;0.000127923246750272!GO:0006402;mRNA catabolic process;0.000132636591742839!GO:0000786;nucleosome;0.000132804924047346!GO:0016023;cytoplasmic membrane-bound vesicle;0.000133041954827046!GO:0031324;negative regulation of cellular metabolic process;0.000150798221532096!GO:0019752;carboxylic acid metabolic process;0.00016044126009058!GO:0003746;translation elongation factor activity;0.000163198944641008!GO:0006082;organic acid metabolic process;0.000164864682679389!GO:0016853;isomerase activity;0.00016909134216099!GO:0006405;RNA export from nucleus;0.000181740843806285!GO:0016741;transferase activity, transferring one-carbon groups;0.000184108568344494!GO:0031410;cytoplasmic vesicle;0.000185368639014083!GO:0005885;Arp2/3 protein complex;0.000188095433656724!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000216854121824925!GO:0051052;regulation of DNA metabolic process;0.000221030086893748!GO:0008168;methyltransferase activity;0.000237943679624181!GO:0009165;nucleotide biosynthetic process;0.000238006994167743!GO:0005788;endoplasmic reticulum lumen;0.000238137749466991!GO:0065009;regulation of a molecular function;0.000264603435854973!GO:0004518;nuclease activity;0.00026627376430159!GO:0006270;DNA replication initiation;0.000277886046142564!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000294217941403306!GO:0030658;transport vesicle membrane;0.000315968265386093!GO:0007243;protein kinase cascade;0.000326410231285373!GO:0019899;enzyme binding;0.000326410231285373!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000351213574936308!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000360951256370305!GO:0043681;protein import into mitochondrion;0.000367077653284385!GO:0008186;RNA-dependent ATPase activity;0.000408414953198036!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000408653705143636!GO:0050789;regulation of biological process;0.000426995143955674!GO:0031326;regulation of cellular biosynthetic process;0.00044762637020676!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000459332030565179!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000469705437131819!GO:0000314;organellar small ribosomal subunit;0.000474612474387842!GO:0005763;mitochondrial small ribosomal subunit;0.000474612474387842!GO:0044440;endosomal part;0.000493997075179459!GO:0010008;endosome membrane;0.000493997075179459!GO:0007088;regulation of mitosis;0.000496634162264869!GO:0031323;regulation of cellular metabolic process;0.000555041494886666!GO:0015980;energy derivation by oxidation of organic compounds;0.000635202463851125!GO:0006818;hydrogen transport;0.000643992071632266!GO:0006612;protein targeting to membrane;0.000689629381545991!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000692015563540326!GO:0044431;Golgi apparatus part;0.000761381773211774!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00077515970178488!GO:0005769;early endosome;0.000777253494203071!GO:0015992;proton transport;0.000782112407146346!GO:0045454;cell redox homeostasis;0.00083509721062905!GO:0046483;heterocycle metabolic process;0.000845324154965022!GO:0016564;transcription repressor activity;0.000880972962657369!GO:0005637;nuclear inner membrane;0.000894783514520543!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000912973314392624!GO:0004527;exonuclease activity;0.000914304802367201!GO:0005525;GTP binding;0.000933288826384306!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000941486140929359!GO:0015399;primary active transmembrane transporter activity;0.000941486140929359!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000975471284630842!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000975471284630842!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000975471284630842!GO:0030660;Golgi-associated vesicle membrane;0.00102679996590033!GO:0016197;endosome transport;0.00108734493062538!GO:0004004;ATP-dependent RNA helicase activity;0.0011738814697071!GO:0005684;U2-dependent spliceosome;0.00118963181402039!GO:0006338;chromatin remodeling;0.00121735331706027!GO:0006839;mitochondrial transport;0.00123156365414368!GO:0000049;tRNA binding;0.00126916739598781!GO:0008610;lipid biosynthetic process;0.00126916739598781!GO:0000228;nuclear chromosome;0.00130277981256476!GO:0051920;peroxiredoxin activity;0.00130946297696231!GO:0006520;amino acid metabolic process;0.00133087774346624!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00141708561084097!GO:0007093;mitotic cell cycle checkpoint;0.00155823281845335!GO:0050662;coenzyme binding;0.00157568207321859!GO:0016251;general RNA polymerase II transcription factor activity;0.00160847665849954!GO:0031072;heat shock protein binding;0.00160847665849954!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00160853997832746!GO:0044262;cellular carbohydrate metabolic process;0.00169660276242592!GO:0000082;G1/S transition of mitotic cell cycle;0.00183351000345555!GO:0032940;secretion by cell;0.00183351000345555!GO:0006626;protein targeting to mitochondrion;0.00205138865289949!GO:0051252;regulation of RNA metabolic process;0.00216339984805459!GO:0005876;spindle microtubule;0.00220523909083124!GO:0006352;transcription initiation;0.00221252588033782!GO:0003924;GTPase activity;0.00224158484058122!GO:0009892;negative regulation of metabolic process;0.00229725869154967!GO:0005774;vacuolar membrane;0.00230521046537074!GO:0006284;base-excision repair;0.00236194236990837!GO:0008033;tRNA processing;0.00238382269017082!GO:0005048;signal sequence binding;0.00241530504168384!GO:0009889;regulation of biosynthetic process;0.00243357893113352!GO:0046983;protein dimerization activity;0.00243357893113352!GO:0007052;mitotic spindle organization and biogenesis;0.00255057522577206!GO:0022890;inorganic cation transmembrane transporter activity;0.00272667005191196!GO:0030137;COPI-coated vesicle;0.00284368507882345!GO:0000922;spindle pole;0.00298147603793707!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00315390310113708!GO:0044452;nucleolar part;0.00326794437876335!GO:0003711;transcription elongation regulator activity;0.00333216039461112!GO:0047485;protein N-terminus binding;0.00333784101094228!GO:0030880;RNA polymerase complex;0.00334067897155552!GO:0030118;clathrin coat;0.00338966163463204!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00346086632744435!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00346086632744435!GO:0015631;tubulin binding;0.003531533391422!GO:0051287;NAD binding;0.00353492952202693!GO:0006383;transcription from RNA polymerase III promoter;0.00356419412065851!GO:0033116;ER-Golgi intermediate compartment membrane;0.0035884300723398!GO:0007050;cell cycle arrest;0.00363011532556678!GO:0019867;outer membrane;0.00365486668782798!GO:0030663;COPI coated vesicle membrane;0.00366841733704458!GO:0030126;COPI vesicle coat;0.00366841733704458!GO:0045045;secretory pathway;0.00367511408128238!GO:0043596;nuclear replication fork;0.0037549106669771!GO:0030384;phosphoinositide metabolic process;0.00381558214868332!GO:0042393;histone binding;0.00395050056118459!GO:0004674;protein serine/threonine kinase activity;0.00398792958686597!GO:0043492;ATPase activity, coupled to movement of substances;0.00418065036500644!GO:0031968;organelle outer membrane;0.00425196210368603!GO:0000059;protein import into nucleus, docking;0.00425713508470441!GO:0000725;recombinational repair;0.00434704088675114!GO:0000724;double-strand break repair via homologous recombination;0.00434704088675114!GO:0031570;DNA integrity checkpoint;0.00438867827213295!GO:0042770;DNA damage response, signal transduction;0.00450700115608274!GO:0032200;telomere organization and biogenesis;0.0045097826158733!GO:0000723;telomere maintenance;0.0045097826158733!GO:0043065;positive regulation of apoptosis;0.00458207761013989!GO:0048522;positive regulation of cellular process;0.00465613627308056!GO:0003725;double-stranded RNA binding;0.00466069177932842!GO:0031252;leading edge;0.00471601611356177!GO:0008632;apoptotic program;0.00481101454395919!GO:0043284;biopolymer biosynthetic process;0.00504465125143364!GO:0006595;polyamine metabolic process;0.00508077225444071!GO:0048500;signal recognition particle;0.00512502659238806!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00512688330761215!GO:0016481;negative regulation of transcription;0.00520377657019481!GO:0006650;glycerophospholipid metabolic process;0.00532746798394165!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00538656998045731!GO:0044437;vacuolar part;0.00548897664781727!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00582218305444228!GO:0016584;nucleosome positioning;0.00585391183871198!GO:0044454;nuclear chromosome part;0.00586307698111853!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00590323703445875!GO:0033367;protein localization in mast cell secretory granule;0.00590323703445875!GO:0033365;protein localization in organelle;0.00590323703445875!GO:0033371;T cell secretory granule organization and biogenesis;0.00590323703445875!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00590323703445875!GO:0033375;protease localization in T cell secretory granule;0.00590323703445875!GO:0042629;mast cell granule;0.00590323703445875!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00590323703445875!GO:0033364;mast cell secretory granule organization and biogenesis;0.00590323703445875!GO:0033380;granzyme B localization in T cell secretory granule;0.00590323703445875!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00590323703445875!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00590323703445875!GO:0033368;protease localization in mast cell secretory granule;0.00590323703445875!GO:0033366;protein localization in secretory granule;0.00590323703445875!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00590323703445875!GO:0033374;protein localization in T cell secretory granule;0.00590323703445875!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00592823786434592!GO:0000428;DNA-directed RNA polymerase complex;0.00592823786434592!GO:0004003;ATP-dependent DNA helicase activity;0.0059603810198783!GO:0016859;cis-trans isomerase activity;0.00596639459516465!GO:0043068;positive regulation of programmed cell death;0.00602321835101697!GO:0006289;nucleotide-excision repair;0.00638579589280636!GO:0031124;mRNA 3'-end processing;0.00655844637300737!GO:0006406;mRNA export from nucleus;0.0066554803050353!GO:0031902;late endosome membrane;0.00677236060338263!GO:0007034;vacuolar transport;0.0067952589156812!GO:0048471;perinuclear region of cytoplasm;0.00681773367979043!GO:0005765;lysosomal membrane;0.00683869373114355!GO:0000910;cytokinesis;0.00692164304084795!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00692370536609329!GO:0000792;heterochromatin;0.00695811090662808!GO:0004261;cathepsin G activity;0.00710511418010552!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00710798011836129!GO:0005741;mitochondrial outer membrane;0.00715615440521503!GO:0008139;nuclear localization sequence binding;0.00715959268529881!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00722482879138604!GO:0046489;phosphoinositide biosynthetic process;0.00723589725053674!GO:0046822;regulation of nucleocytoplasmic transport;0.00724378206308624!GO:0000139;Golgi membrane;0.00739555473209456!GO:0007006;mitochondrial membrane organization and biogenesis;0.00743293501889172!GO:0007041;lysosomal transport;0.00749974663764737!GO:0016311;dephosphorylation;0.00756369747465075!GO:0046474;glycerophospholipid biosynthetic process;0.00756369747465075!GO:0043414;biopolymer methylation;0.00775353162044794!GO:0016126;sterol biosynthetic process;0.00797195131134218!GO:0006979;response to oxidative stress;0.00828477808250529!GO:0030176;integral to endoplasmic reticulum membrane;0.00845305202590433!GO:0046966;thyroid hormone receptor binding;0.00855136156158444!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00864986273555525!GO:0032561;guanyl ribonucleotide binding;0.00887102898466598!GO:0019001;guanyl nucleotide binding;0.00887102898466598!GO:0006611;protein export from nucleus;0.00887482411275284!GO:0030133;transport vesicle;0.00890385219644276!GO:0030134;ER to Golgi transport vesicle;0.0089050340944272!GO:0046467;membrane lipid biosynthetic process;0.00902379412751921!GO:0008312;7S RNA binding;0.00922047648223621!GO:0006376;mRNA splice site selection;0.00924102765202042!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00924102765202042!GO:0005663;DNA replication factor C complex;0.0092685613775107!GO:0006891;intra-Golgi vesicle-mediated transport;0.00934618239331099!GO:0051539;4 iron, 4 sulfur cluster binding;0.0093681044771353!GO:0048037;cofactor binding;0.00948856756059847!GO:0051053;negative regulation of DNA metabolic process;0.00951710509863997!GO:0050790;regulation of catalytic activity;0.00959578622762433!GO:0016044;membrane organization and biogenesis;0.00962729318657609!GO:0005996;monosaccharide metabolic process;0.00978853724274876!GO:0009967;positive regulation of signal transduction;0.00980759102220445!GO:0006917;induction of apoptosis;0.00989260836751648!GO:0009112;nucleobase metabolic process;0.0100385931373414!GO:0009116;nucleoside metabolic process;0.0100756385008915!GO:0003887;DNA-directed DNA polymerase activity;0.0101013068016193!GO:0010468;regulation of gene expression;0.0102148424863056!GO:0030867;rough endoplasmic reticulum membrane;0.0103715490198155!GO:0016788;hydrolase activity, acting on ester bonds;0.0109167238312671!GO:0030127;COPII vesicle coat;0.0110743538745504!GO:0012507;ER to Golgi transport vesicle membrane;0.0110743538745504!GO:0005905;coated pit;0.0110999135223887!GO:0016791;phosphoric monoester hydrolase activity;0.0114667879588873!GO:0006350;transcription;0.0115365384576618!GO:0032259;methylation;0.0115516270008981!GO:0000118;histone deacetylase complex;0.0115516270008981!GO:0051540;metal cluster binding;0.0115516270008981!GO:0051536;iron-sulfur cluster binding;0.0115516270008981!GO:0035267;NuA4 histone acetyltransferase complex;0.0115806553624518!GO:0000793;condensed chromosome;0.0117785752923267!GO:0019318;hexose metabolic process;0.0118889474086378!GO:0003702;RNA polymerase II transcription factor activity;0.0120450481283693!GO:0016569;covalent chromatin modification;0.0122048079873308!GO:0008276;protein methyltransferase activity;0.0123610329954558!GO:0012502;induction of programmed cell death;0.0127858562912886!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0128511537368106!GO:0000339;RNA cap binding;0.0129029569092994!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0130618120128094!GO:0045047;protein targeting to ER;0.0130618120128094!GO:0016272;prefoldin complex;0.0130618120128094!GO:0043601;nuclear replisome;0.0132298740207911!GO:0030894;replisome;0.0132298740207911!GO:0051098;regulation of binding;0.0143403296740598!GO:0030125;clathrin vesicle coat;0.0144317649562519!GO:0030665;clathrin coated vesicle membrane;0.0144317649562519!GO:0000726;non-recombinational repair;0.0145144776222558!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0145147221528167!GO:0043488;regulation of mRNA stability;0.0146052316368245!GO:0043487;regulation of RNA stability;0.0146052316368245!GO:0007040;lysosome organization and biogenesis;0.0156979340536482!GO:0043022;ribosome binding;0.0158285562489717!GO:0016407;acetyltransferase activity;0.0158518535141283!GO:0035258;steroid hormone receptor binding;0.0158518535141283!GO:0051789;response to protein stimulus;0.0159081126907413!GO:0006986;response to unfolded protein;0.0159081126907413!GO:0006519;amino acid and derivative metabolic process;0.0159541931739636!GO:0005758;mitochondrial intermembrane space;0.0159711162413464!GO:0019206;nucleoside kinase activity;0.0161580015845532!GO:0005832;chaperonin-containing T-complex;0.0162160351812918!GO:0006497;protein amino acid lipidation;0.0164002554847189!GO:0051087;chaperone binding;0.0164784453114835!GO:0030119;AP-type membrane coat adaptor complex;0.0165006127951946!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0165230207409677!GO:0000077;DNA damage checkpoint;0.0167969216721171!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0168613563815761!GO:0000209;protein polyubiquitination;0.0171555366855648!GO:0008047;enzyme activator activity;0.0173600907258666!GO:0000123;histone acetyltransferase complex;0.0173921977261459!GO:0004540;ribonuclease activity;0.0174126557215333!GO:0019783;small conjugating protein-specific protease activity;0.0174846712237625!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0175811903460593!GO:0006007;glucose catabolic process;0.0177849283872161!GO:0003714;transcription corepressor activity;0.0178176551341905!GO:0017166;vinculin binding;0.0180489160073295!GO:0031123;RNA 3'-end processing;0.0180631561266335!GO:0005669;transcription factor TFIID complex;0.0183310285705147!GO:0018193;peptidyl-amino acid modification;0.0183416694199146!GO:0006607;NLS-bearing substrate import into nucleus;0.0184087538228912!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0186762861549611!GO:0008234;cysteine-type peptidase activity;0.0186895506428403!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0187153764291572!GO:0043189;H4/H2A histone acetyltransferase complex;0.0187971385768871!GO:0006354;RNA elongation;0.0188572291948026!GO:0006516;glycoprotein catabolic process;0.0189426091460562!GO:0009124;nucleoside monophosphate biosynthetic process;0.0192969678201542!GO:0009123;nucleoside monophosphate metabolic process;0.0192969678201542!GO:0006275;regulation of DNA replication;0.0193083967830255!GO:0004576;oligosaccharyl transferase activity;0.0193771817264618!GO:0001726;ruffle;0.0196133713256715!GO:0008144;drug binding;0.0196558355303813!GO:0008333;endosome to lysosome transport;0.0197279980351078!GO:0007259;JAK-STAT cascade;0.0197279980351078!GO:0000781;chromosome, telomeric region;0.0197390021316325!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0197909378150455!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0199370420108605!GO:0005975;carbohydrate metabolic process;0.0200893912559093!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0200893912559093!GO:0015002;heme-copper terminal oxidase activity;0.0200893912559093!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0200893912559093!GO:0004129;cytochrome-c oxidase activity;0.0200893912559093!GO:0048487;beta-tubulin binding;0.0201951289669219!GO:0000287;magnesium ion binding;0.0202366964049402!GO:0040029;regulation of gene expression, epigenetic;0.0205167628034643!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0212009286676011!GO:0010257;NADH dehydrogenase complex assembly;0.0212009286676011!GO:0033108;mitochondrial respiratory chain complex assembly;0.0212009286676011!GO:0008022;protein C-terminus binding;0.0218342379925733!GO:0000096;sulfur amino acid metabolic process;0.0223241742239155!GO:0006892;post-Golgi vesicle-mediated transport;0.0225119156606675!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0226472463714294!GO:0005869;dynactin complex;0.0230988248370478!GO:0004843;ubiquitin-specific protease activity;0.0230988248370478!GO:0004177;aminopeptidase activity;0.0231017026122144!GO:0030521;androgen receptor signaling pathway;0.0231017026122144!GO:0004448;isocitrate dehydrogenase activity;0.0231017026122144!GO:0007033;vacuole organization and biogenesis;0.0232708048881826!GO:0030131;clathrin adaptor complex;0.0233205581899292!GO:0006779;porphyrin biosynthetic process;0.0235162972129043!GO:0033014;tetrapyrrole biosynthetic process;0.0235162972129043!GO:0000178;exosome (RNase complex);0.0237453829872457!GO:0030132;clathrin coat of coated pit;0.0240202829703439!GO:0006144;purine base metabolic process;0.0245231297285187!GO:0016408;C-acyltransferase activity;0.0247652322638754!GO:0006730;one-carbon compound metabolic process;0.0251353882776411!GO:0031970;organelle envelope lumen;0.0251606169987812!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0252680353282997!GO:0006118;electron transport;0.0256792761310806!GO:0006733;oxidoreduction coenzyme metabolic process;0.0262052860690855!GO:0004185;serine carboxypeptidase activity;0.0262052860690855!GO:0031647;regulation of protein stability;0.0279649992027619!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0280103668226091!GO:0000819;sister chromatid segregation;0.0281401991074164!GO:0009119;ribonucleoside metabolic process;0.0282746857073152!GO:0016790;thiolester hydrolase activity;0.028652107494225!GO:0000070;mitotic sister chromatid segregation;0.0286881627280008!GO:0007242;intracellular signaling cascade;0.0287323608928119!GO:0005874;microtubule;0.0290368831566267!GO:0008250;oligosaccharyl transferase complex;0.0291400032298419!GO:0045947;negative regulation of translational initiation;0.029197338088388!GO:0033170;DNA-protein loading ATPase activity;0.030295520297083!GO:0003689;DNA clamp loader activity;0.030295520297083!GO:0046870;cadmium ion binding;0.0303539580132682!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0303539580132682!GO:0042158;lipoprotein biosynthetic process;0.0304957701012195!GO:0004221;ubiquitin thiolesterase activity;0.030520099851359!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0307355864859047!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.031025617210827!GO:0016570;histone modification;0.0311058268233675!GO:0005777;peroxisome;0.0311200033011773!GO:0042579;microbody;0.0311200033011773!GO:0004722;protein serine/threonine phosphatase activity;0.0311200033011773!GO:0006778;porphyrin metabolic process;0.0313598443625577!GO:0033013;tetrapyrrole metabolic process;0.0313598443625577!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0313598443625577!GO:0012510;trans-Golgi network transport vesicle membrane;0.0313598443625577!GO:0008408;3'-5' exonuclease activity;0.031415937200379!GO:0006740;NADPH regeneration;0.0316002034772995!GO:0006098;pentose-phosphate shunt;0.0316002034772995!GO:0051092;activation of NF-kappaB transcription factor;0.0316559686860087!GO:0007017;microtubule-based process;0.0325423829626273!GO:0006378;mRNA polyadenylation;0.0325510430646404!GO:0051223;regulation of protein transport;0.032906450102747!GO:0006695;cholesterol biosynthetic process;0.0329394607045504!GO:0044438;microbody part;0.0334363881795878!GO:0044439;peroxisomal part;0.0334363881795878!GO:0005784;translocon complex;0.0345027838960879!GO:0046426;negative regulation of JAK-STAT cascade;0.0345052345106407!GO:0019377;glycolipid catabolic process;0.034594537515002!GO:0006596;polyamine biosynthetic process;0.0347491638824855!GO:0006509;membrane protein ectodomain proteolysis;0.0347491638824855!GO:0033619;membrane protein proteolysis;0.0347491638824855!GO:0008180;signalosome;0.0350370544946774!GO:0006506;GPI anchor biosynthetic process;0.0352852045275938!GO:0019843;rRNA binding;0.0352852045275938!GO:0016279;protein-lysine N-methyltransferase activity;0.035717635450281!GO:0018024;histone-lysine N-methyltransferase activity;0.035717635450281!GO:0016278;lysine N-methyltransferase activity;0.035717635450281!GO:0046128;purine ribonucleoside metabolic process;0.035717635450281!GO:0042278;purine nucleoside metabolic process;0.035717635450281!GO:0009161;ribonucleoside monophosphate metabolic process;0.035792612024304!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.035792612024304!GO:0044450;microtubule organizing center part;0.037676211083424!GO:0030518;steroid hormone receptor signaling pathway;0.0377043367644182!GO:0048518;positive regulation of biological process;0.0378593448158838!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0378974185272218!GO:0045792;negative regulation of cell size;0.0379326535892867!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0380046289990674!GO:0009615;response to virus;0.038071726679415!GO:0008017;microtubule binding;0.0385340144184213!GO:0006672;ceramide metabolic process;0.0392823432088904!GO:0017134;fibroblast growth factor binding;0.0393388901498524!GO:0008287;protein serine/threonine phosphatase complex;0.0393388901498524!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0393388901498524!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0395580176603076!GO:0006807;nitrogen compound metabolic process;0.0395580176603076!GO:0009066;aspartate family amino acid metabolic process;0.0407072224473314!GO:0004096;catalase activity;0.040830722821673!GO:0006769;nicotinamide metabolic process;0.0412750654529516!GO:0030224;monocyte differentiation;0.0415462276125859!GO:0004563;beta-N-acetylhexosaminidase activity;0.0415521671782767!GO:0004523;ribonuclease H activity;0.0418594464340529!GO:0008156;negative regulation of DNA replication;0.0426032319918651!GO:0000152;nuclear ubiquitin ligase complex;0.0427012363147414!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0428172094243958!GO:0007021;tubulin folding;0.0429050829701173!GO:0006213;pyrimidine nucleoside metabolic process;0.0433864177413505!GO:0005652;nuclear lamina;0.043680080401817!GO:0006505;GPI anchor metabolic process;0.043680080401817!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0439223630263057!GO:0001832;blastocyst growth;0.0445792131185857!GO:0009308;amine metabolic process;0.0452067343735808!GO:0030911;TPR domain binding;0.0452067343735808!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0452067343735808!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0452067343735808!GO:0009126;purine nucleoside monophosphate metabolic process;0.0452067343735808!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0452067343735808!GO:0006767;water-soluble vitamin metabolic process;0.0453615765195899!GO:0046554;malate dehydrogenase (NADP+) activity;0.0455109242518253!GO:0031903;microbody membrane;0.0463594730495308!GO:0005778;peroxisomal membrane;0.0463594730495308!GO:0030308;negative regulation of cell growth;0.0463905944534078!GO:0046365;monosaccharide catabolic process;0.046641896203014!GO:0030508;thiol-disulfide exchange intermediate activity;0.0470837668299907!GO:0007010;cytoskeleton organization and biogenesis;0.0473069015887417!GO:0051452;cellular pH reduction;0.048388714847147!GO:0051453;regulation of cellular pH;0.048388714847147!GO:0045851;pH reduction;0.048388714847147!GO:0003893;epsilon DNA polymerase activity;0.0489263028824314!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0489263028824314
|sample_id=10764
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=RXR{A,B,G}_{NR1H2,PPAR}dimers:1.88410613977;MYB:1.8024348309;E2F1..5:1.50662764671;FOXA2:1.37659039163;MTF1:1.32768983287;POU5F1:1.31348507274;HOX{A6,A7,B6,B7}:1.26094247399;NANOG:1.2151302696;POU2F1..3:1.14858106798;YY1:0.952615884926;NFY{A,B,C}:0.931512065545;BREu{core}:0.832220757348;SPIB:0.829873434172;TOPORS:0.761874632397;SPI1:0.742520648454;FOXP1:0.720436852554;OCT4_SOX2{dimer}:0.717655386318;PITX1..3:0.636551990338;DMAP1_NCOR{1,2}_SMARC:0.630889218223;ELK1,4_GABP{A,B1}:0.614593796292;ETS1,2:0.556008898383;CRX:0.53922716774;ELF1,2,4:0.537423027995;IKZF2:0.518356580762;TFDP1:0.507628327996;HAND1,2:0.480661566526;CUX2:0.455717122646;NFIL3:0.451719673798;NKX3-1:0.432449488276;EN1,2:0.422324446744;VSX1,2:0.407720848006;FOXN1:0.394887305052;POU1F1:0.336802856311;GATA6:0.331911879785;SREBF1,2:0.289043537015;NKX2-3_NKX2-5:0.283880566199;PRRX1,2:0.274414975881;PAX3,7:0.253869626846;CEBPA,B_DDIT3:0.252994027499;FOXP3:0.241265098361;ZNF143:0.236980609822;MYOD1:0.195849742402;NR5A1,2:0.193038181551;DBP:0.19164071582;RUNX1..3:0.191260248455;HLF:0.139402134252;HNF4A_NR2F1,2:0.136641464994;RXRA_VDR{dimer}:0.133385388347;FOXQ1:0.132512886126;PAX2:0.0910226778088;HOX{A4,D4}:0.0840197023242;NRF1:0.0621820849005;NKX2-1,4:0.061160903784;CREB1:0.0592565777416;CDX1,2,4:0.0337514586589;AHR_ARNT_ARNT2:0.017928884621;GFI1:0.015414205315;TBP:-0.0277668878305;TLX2:-0.0396683067568;ZBTB16:-0.051121728477;RORA:-0.0517577272538;TGIF1:-0.115159376232;HOX{A5,B5}:-0.120912407735;POU3F1..4:-0.125112588206;PPARG:-0.140868286304;NKX2-2,8:-0.142248715556;ATF4:-0.148826338249;PBX1:-0.152246625091;AIRE:-0.159797357147;EP300:-0.163870548624;NR6A1:-0.16513433013;SOX17:-0.169045275773;POU6F1:-0.17647991341;PRDM1:-0.177989121139;STAT1,3:-0.186143611236;ESRRA:-0.201866605173;SP1:-0.202178092159;PAX6:-0.205076706925;AR:-0.210459911915;PAX4:-0.222824058947;IRF1,2:-0.229238401135;ZNF423:-0.247131997547;SOX{8,9,10}:-0.249047178027;NFE2:-0.254625136129;HMGA1,2:-0.255624751778;ALX1:-0.26345092961;REST:-0.266734034682;ATF5_CREB3:-0.277571139459;HBP1_HMGB_SSRP1_UBTF:-0.278878640752;TEF:-0.283747124908;HNF1A:-0.294764064336;HOXA9_MEIS1:-0.299275919346;NFKB1_REL_RELA:-0.309894505811;XCPE1{core}:-0.323366569002;IRF7:-0.330368209452;MTE{core}:-0.333970856793;ZNF148:-0.362753721308;bHLH_family:-0.371294772115;MYFfamily:-0.383496367227;SNAI1..3:-0.389586271643;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.397771021078;NANOG{mouse}:-0.398551042732;ZEB1:-0.399401089074;FOS_FOS{B,L1}_JUN{B,D}:-0.414845043797;NKX3-2:-0.420823622471;PAX8:-0.423002062468;NHLH1,2:-0.448176634863;RFX2..5_RFXANK_RFXAP:-0.448564558022;ESR1:-0.460442774449;KLF4:-0.469224125693;GCM1,2:-0.48545754911;MZF1:-0.493330140135;LMO2:-0.507882917549;GATA4:-0.521252187033;MED-1{core}:-0.523878056957;TP53:-0.54735973237;FOXO1,3,4:-0.587577155798;MEF2{A,B,C,D}:-0.594224536986;FOSL2:-0.59483507782;BACH2:-0.599084422973;PDX1:-0.605810290407;FOX{F1,F2,J1}:-0.627431350808;PAX5:-0.630195291911;ARID5B:-0.637793736987;GFI1B:-0.643587927633;SOX5:-0.648875905372;RXR{A,B,G}:-0.655156856848;HSF1,2:-0.678591494507;MYBL2:-0.679124952438;HIC1:-0.683258769117;NFIX:-0.704325000144;XBP1:-0.706912645613;T:-0.714343260014;ZNF238:-0.719625754853;ZFP161:-0.722487919006;GTF2A1,2:-0.741666321613;HIF1A:-0.743465423929;STAT5{A,B}:-0.745920039277;GZF1:-0.755580747454;PAX1,9:-0.761898408988;EGR1..3:-0.764036906321;NFE2L2:-0.801646271507;ATF2:-0.803502110968;CDC5L:-0.809331963102;NKX6-1,2:-0.819468277743;ONECUT1,2:-0.827393307896;UFEwm:-0.830308909577;HES1:-0.830330250588;TFAP4:-0.842950100989;TFAP2{A,C}:-0.854851322455;RBPJ:-0.85488501153;ADNP_IRX_SIX_ZHX:-0.873039434727;MAFB:-0.875294732471;GTF2I:-0.888762691652;LEF1_TCF7_TCF7L1,2:-0.900207251025;NFE2L1:-0.911101444801;TFAP2B:-0.915757255406;ZNF384:-0.920099401146;FOXL1:-0.921648634383;BPTF:-0.930556369511;NR1H4:-0.944279266894;HMX1:-0.952791396134;SRF:-0.974045564037;RFX1:-1.02267964836;ZIC1..3:-1.02473799043;SMAD1..7,9:-1.02917880472;LHX3,4:-1.05166199408;TAL1_TCF{3,4,12}:-1.10292297993;EBF1:-1.12567613803;RREB1:-1.13282688099;EVI1:-1.14975124764;IKZF1:-1.15889813681;PATZ1:-1.18359768448;FOX{I1,J2}:-1.18903488846;STAT2,4,6:-1.19076553679;TFCP2:-1.19233849854;FOXD3:-1.20196433549;TLX1..3_NFIC{dimer}:-1.21262617753;SOX2:-1.21639302551;FOXM1:-1.27199353689;TEAD1:-1.29194953288;SPZ1:-1.29961538598;FOX{D1,D2}:-1.30209583367;JUN:-1.30430826595;NFATC1..3:-1.33454378043;MAZ:-1.37100109737;GLI1..3:-1.37132327652;ATF6:-1.45665287296;ALX4:-1.52435450717;TBX4,5:-1.5424170329;ZBTB6:-1.69612298263;NR3C1:-2.03273776278
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10764-110E8;search_select_hide=table117:FF:10764-110E8
}}
}}

Latest revision as of 15:03, 3 June 2020

Name:acute myeloid leukemia (FAB M5) cell line:NOMO-1
Species:Human (Homo sapiens)
Library ID:CNhs13050
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexfemale
ageunknown
cell typemyeloid progenitor cell
cell lineNOMO-1
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004882
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13050 CAGE DRX007811 DRR008683
Accession ID Hg19

Library idBAMCTSS
CNhs13050 DRZ000108 DRZ001493
Accession ID Hg38

Library idBAMCTSS
CNhs13050 DRZ011458 DRZ012843
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.131
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.493
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0.212
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0178
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.103
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0711
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.154
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0212
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.357
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0633
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.601
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.583
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0752
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.475
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.357
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.211
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.268
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13050

Jaspar motifP-value
MA0002.20.0258
MA0003.10.955
MA0004.10.127
MA0006.10.658
MA0007.10.887
MA0009.10.392
MA0014.10.292
MA0017.10.00452
MA0018.20.382
MA0019.10.0657
MA0024.13.89449e-8
MA0025.10.0954
MA0027.10.428
MA0028.16.75513e-5
MA0029.10.499
MA0030.10.0261
MA0031.10.0303
MA0035.20.227
MA0038.10.51
MA0039.20.085
MA0040.10.862
MA0041.10.539
MA0042.10.975
MA0043.10.0427
MA0046.10.523
MA0047.20.181
MA0048.10.118
MA0050.10.274
MA0051.10.807
MA0052.10.0441
MA0055.10.0358
MA0057.10.41
MA0058.10.12
MA0059.10.166
MA0060.11.69537e-6
MA0061.10.382
MA0062.22.27801e-9
MA0065.20.0538
MA0066.10.41
MA0067.10.324
MA0068.10.514
MA0069.10.174
MA0070.10.677
MA0071.10.0811
MA0072.10.451
MA0073.10.32
MA0074.10.124
MA0076.11.18128e-4
MA0077.10.921
MA0078.10.703
MA0079.20.915
MA0080.24.34734e-13
MA0081.10.00323
MA0083.10.00469
MA0084.10.323
MA0087.10.197
MA0088.10.352
MA0090.11.29364e-6
MA0091.10.275
MA0092.10.604
MA0093.10.156
MA0099.28.45454e-6
MA0100.16.42382e-4
MA0101.10.125
MA0102.20.0128
MA0103.10.638
MA0104.20.00275
MA0105.10.748
MA0106.10.971
MA0107.10.018
MA0108.20.00752
MA0111.10.127
MA0112.20.498
MA0113.10.291
MA0114.10.00301
MA0115.10.0155
MA0116.10.00593
MA0117.10.479
MA0119.10.387
MA0122.10.415
MA0124.10.342
MA0125.10.978
MA0131.10.0333
MA0135.10.767
MA0136.11.36659e-16
MA0137.20.0359
MA0138.20.417
MA0139.10.825
MA0140.10.0467
MA0141.10.0937
MA0142.10.246
MA0143.10.686
MA0144.10.23
MA0145.10.141
MA0146.10.0724
MA0147.10.00771
MA0148.10.0386
MA0149.10.227
MA0150.10.0559
MA0152.10.483
MA0153.10.1
MA0154.10.874
MA0155.10.29
MA0156.13.57645e-12
MA0157.10.152
MA0159.10.992
MA0160.10.00673
MA0162.10.24
MA0163.16.97949e-5
MA0164.10.339
MA0258.10.527
MA0259.10.132



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13050

Novel motifP-value
10.272
100.0191
1000.327
1010.287
1020.377
1030.874
1040.777
1050.574
1060.924
1070.277
1080.539
1090.0701
110.331
1100.754
1110.35
1120.163
1130.684
1140.954
1150.164
1160.879
1170.101
1180.222
1190.762
120.489
1200.559
1210.852
1220.369
1230.0156
1240.512
1250.765
1260.672
1270.117
1280.691
1290.531
136.98667e-4
1300.927
1310.0304
1320.559
1330.673
1340.467
1350.668
1360.128
1370.264
1380.413
1390.633
140.772
1400.41
1410.401
1420.922
1430.864
1440.808
1450.356
1460.623
1470.363
1480.558
1490.304
150.707
1500.784
1510.905
1520.439
1530.901
1540.482
1550.0587
1560.933
1570.243
1580.628
1590.884
160.458
1600.591
1610.121
1620.907
1630.532
1640.587
1650.399
1660.266
1670.123
1680.424
1690.257
170.817
180.619
190.975
20.0981
200.243
210.161
220.482
230.0194
240.355
250.207
260.364
271
280.796
290.503
30.21
300.0398
310.0991
320.0472
330.491
340.766
350.803
360.102
370.702
380.386
390.341
40.0363
400.0597
410.879
420.682
430.724
440.906
450.234
460.912
470.295
480.385
490.347
50.438
500.781
510.775
520.59
530.235
540.48
550.867
560.642
570.419
580.0575
590.505
60.982
600.639
610.122
620.198
630.387
640.804
650.291
660.00398
670.822
680.605
690.863
70.0688
700.473
710.051
720.227
730.463
740.892
750.0811
760.278
770.0579
780.0591
790.18
80.579
800.608
810.489
820.132
830.234
840.513
850.149
860.665
870.0286
880.425
890.122
90.773
900.384
910.316
920.34
930.89
940.661
950.0581
960.91
970.57
980.363
990.0288



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13050


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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