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(Created page with "{{f5samples |id=FF:11903-125F4 |name=migratory langerhans cells, donor3 |sample_id=11903 |rna_tube_id=125F4 |rna_box=125 |rna_position=F4 |sample_cell_lot= |sample_cell_catalo...")
 
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{{f5samples
{{f5samples
|id=FF:11903-125F4
|DRA_sample_Accession=CAGE@SAMD00004873
|name=migratory langerhans cells, donor3
|accession_numbers=CAGE;DRX008570;DRR009442;DRZ000867;DRZ002252;DRZ012217;DRZ013602
|sample_id=11903
|ancestors_in_anatomy_facet=
|rna_tube_id=125F4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453
|rna_box=125
|rna_position=F4
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=LC-C
|rna_catalog_number=
|sample_species=
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=0.5
|rna_od260/280=2.06
|sample_cell_type=langerhans cell
|sample_cell_line=
|sample_collaboration=Teunis Geijtenbeek
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.1376
|rna_concentration=0.11376
|sample_note=
|profile_hcage=CNhs13547,LSID1033,release012,COMPLETED
|profile_cagescan=
|profile_srnaseq=
|profile_rnaseq=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000451,CL:0000453,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000837,CL:0000988,CL:0000990,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011136
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!3.00!987.93!IRF4;;chr11:47400078..47400106,-!p1@SPI1!2.28!190.55!SPI1;;chr20:20348740..20348757,+!p1@INSM1!2.06!114.17!INSM1;;chr2:68592406..68592424,+!p1@PLEK!1.96!90.12!PLEK;;chr1:25291475..25291511,-!p2@RUNX3!1.92!82.60!RUNX3;;chr4:185395590..185395627,-!p3@IRF2!1.86!88.33!IRF2;;chr9:102584262..102584276,+!p1@NR4A3!1.77!125.29!NR4A3;;chr9:102584159..102584174,+!p2@NR4A3!1.76!98.63!NR4A3;;chr9:102584128..102584144,+!p3@NR4A3!1.73!98.63!NR4A3;;chr2:61108695..61108753,+!p1@REL!1.71!330.40!REL;;chr1:157108746..157108762,-!p4@ETV3!1.68!46.62!ETV3;;chr7:50344289..50344323,+!p1@IKZF1!1.66!44.82!IKZF1;;chr1:157108130..157108173,-!p1@ETV3!1.63!287.71!ETV3;;chr1:25256756..25256774,-!p1@RUNX3!1.62!74.26!RUNX3;;chr7:50344251..50344288,+!p3@IKZF1!1.55!34.84!IKZF1;;chr19:45252008..45252024,+!p2@BCL3!1.52!101.74!BCL3;;chr2:8822176..8822196,+!p1@ID2!1.51!4132.15!ID2;;chr19:50922187..50922204,+!p1@SPIB!1.48!28.95!SPIB;;chr2:61108808..61108821,+!p3@REL!1.47!35.66!REL;;chr11:47400062..47400077,-!p2@SPI1!1.44!26.33!SPI1;;chr1:151319654..151319698,-!p2@RFX5!1.42!53.65!RFX5;;chr5:71803177..71803255,-!p1@ZNF366!1.40!24.04!ZNF366;;chr15:90544532..90544563,+!p1@ZNF710!1.38!45.31!ZNF710;;chr10:104155480..104155534,+!p2@NFKB2!1.37!142.30!NFKB2;;chr7:50343634..50343717,+!p2@IKZF1!1.37!22.57!IKZF1;;chr2:231090433..231090469,+!p1@SP140!1.34!20.94!SP140;;chr6:106534192..106534224,+!p1@PRDM1!1.33!56.59!PRDM1;;chr9:102584241..102584261,+!p4@NR4A3!1.33!31.57!NR4A3;;chr4:185395633..185395651,-!p2@IRF2!1.30!30.10!IRF2;;chr2:192015701..192015743,-!p1@STAT4!1.30!26.01!STAT4;;chr12:11802753..11802834,+!p2@ETV6!1.29!88.98!ETV6;;chr1:157108764..157108776,-!p7@ETV3!1.29!18.32!ETV3;;chr2:68592394..68592405,+!p2@PLEK!1.27!17.83!PLEK;;chr19:20188776..20188826,+!p1@ZNF90!1.26!46.29!ZNF90;;chr2:61108771..61108789,+!p4@REL!1.26!25.84!REL;;chr6:106534230..106534254,+!p2@PRDM1!1.25!41.55!PRDM1;;chr19:50432132..50432217,+!p2@ATF5!1.24!19.46!ATF5;;chr16:31885093..31885165,+!p1@ZNF267!1.23!239.46!ZNF267;;chr9:102584278..102584285,+!p5@NR4A3!1.22!15.70!NR4A3;;chr2:231090471..231090504,+!p2@SP140!1.21!15.05!SP140;;chr2:61108650..61108687,+!p2@REL!1.19!70.17!REL;;chr6:12012170..12012245,+!p1@HIVEP1!1.16!67.88!HIVEP1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.16!18.81!NFKBIZ;;chr2:169312725..169312810,+!p1@CERS6!1.15!316.34!CERS6;;chr11:47237922..47237964,+!p4@DDB2!1.15!15.05!DDB2;;chrX:56258844..56258882,+!p1@KLF8!1.13!17.34!KLF8;;chr4:103422499..103422632,+!p1@NFKB1!1.10!240.28!NFKB1;;chr19:45579725..45579743,-!p1@ZNF296!1.09!51.36!ZNF296;;chr22:38380543..38380569,-!p1@SOX10!1.07!10.80!SOX10;;chr12:54785074..54785122,-!p2@ZNF385A!1.06!16.36!ZNF385A;;chr7:128577972..128578047,+!p1@IRF5!1.05!16.19!IRF5;;chr6:144385698..144385742,-!p2@PLAGL1!1.04!12.27!PLAGL1;;chr19:20150268..20150298,-!p2@ZNF682!1.03!18.48!ZNF682;;chr2:192015750..192015793,-!p2@STAT4!1.03!13.25!STAT4;;chr7:150102756..150102772,+!p5@ZNF775!1.03!9.65!ZNF775;;chr2:214016254..214016282,-!p7@IKZF2!1.01!9.16!IKZF2;;chr1:157108728..157108744,-!p5@ETV3!1.01!9.16!ETV3;;chr13:41593425..41593480,-!p1@ELF1!1.00!59.05!ELF1;;chr19:20011744..20011770,+!p1@ZNF93!1.00!35.66!ZNF93;;chr6:12012249..12012266,+!p5@HIVEP1!0.99!15.38!HIVEP1;;chr19:20188831..20188844,+!p2@ZNF90!0.99!8.83!ZNF90;;chr11:47399996..47400014,-!p4@SPI1!0.99!8.83!SPI1;;chr12:27485785..27485816,+!p1@ARNTL2!0.98!61.17!ARNTL2;;chr5:321810..321877,+!p1@AHRR!0.98!28.13!AHRR;;chr14:75988771..75988826,+!p1@BATF!0.98!11.61!BATF;;chr19:45504688..45504782,+!p1@RELB!0.97!52.50!RELB;;chr1:8935472..8935488,-!p20@ENO1!0.97!8.34!ENO1;;chr16:85932760..85932775,+!p1@IRF8!0.96!8.18!IRF8;;chr2:178128250..178128293,-!p6@NFE2L2!0.95!20.45!NFE2L2;;chr4:103478257..103478273,+!p28@NFKB1!0.95!8.01!NFKB1;;chr20:62462566..62462631,-!p1@ZBTB46!0.94!14.88!ZBTB46;;chr2:214015343..214015366,-!p3@IKZF2!0.94!7.69!IKZF2;;chr11:47400045..47400060,-!p6@SPI1!0.93!7.52!SPI1;;chr4:185395191..185395226,-!p4@IRF2!0.92!10.47!IRF2;;chr9:117150254..117150271,-!p1@AKNA!0.90!19.79!AKNA;;chr1:221052776..221052799,+!p1@HLX!0.90!12.92!HLX;;chr20:50159198..50159299,-!p1@NFATC2!0.90!10.30!NFATC2;;chr10:104154246..104154347,+!p3@NFKB2!0.88!42.36!NFKB2;;chr1:221052733..221052749,+!p2@HLX!0.88!8.67!HLX;;chrX:56258811..56258838,+!p2@KLF8!0.87!8.67!KLF8;;chr2:74229812..74229867,+!p1@TET3!0.86!16.36!TET3;;chr19:12444440..12444455,-!p1@ZNF563!0.86!11.29!ZNF563;;chr11:47400032..47400043,-!p5@SPI1!0.86!6.22!SPI1;;chr11:47236584..47236679,+!p1@DDB2!0.85!70.01!DDB2;;chr19:37019136..37019178,-!p1@ZNF260!0.85!52.50!ZNF260;;chr7:17338324..17338341,+!p3@AHR!0.85!21.43!AHR;;chr19:20011775..20011800,+!p2@ZNF93!0.85!11.29!ZNF93;;chrX:56258900..56258917,+!p4@KLF8!0.85!6.05!KLF8;;chr3:5021113..5021180,+!p1@BHLHE40!0.84!440.32!BHLHE40;;chr10:3827371..3827386,-!p2@KLF6!0.84!53.16!KLF6;;chr9:117160738..117160782,-!p2@AKNA!0.84!25.84!AKNA;;chr1:10754477..10754517,-!p1@CASZ1!0.84!10.30!CASZ1;;chr15:85144307..85144329,+!p2@ZSCAN2!0.84!6.87!ZSCAN2;;chr1:25291620.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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000451;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000453;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000990
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor3.CNhs13547.11903-125F4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor3.CNhs13547.11903-125F4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor3.CNhs13547.11903-125F4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor3.CNhs13547.11903-125F4.hg38.nobarcode.ctss.bed.gz
|id=FF:11903-125F4
|is_a=EFO:0002091;;FF:0011136
|is_obsolete=
|library_id=CNhs13547
|library_id_phase_based=2:CNhs13547
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11903
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11903
|name=migratory langerhans cells, donor3
|namespace=
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|profile_hcage=CNhs13547,LSID1033,release012,COMPLETED
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.11376
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=LC-C
|rna_od260/230=0.5
|rna_od260/280=2.06
|rna_position=F4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=125F4
|rna_weight_ug=1.1376
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=langerhans cell
|sample_collaboration=Teunis Geijtenbeek
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.78196403156067e-247!GO:0043227;membrane-bound organelle;4.89231462859659e-203!GO:0043231;intracellular membrane-bound organelle;1.07042663392571e-202!GO:0043226;organelle;1.52249762651566e-199!GO:0043229;intracellular organelle;6.84087249387403e-199!GO:0005737;cytoplasm;2.72618640950604e-164!GO:0044422;organelle part;4.87179330254724e-122!GO:0044446;intracellular organelle part;1.71465979598429e-120!GO:0044444;cytoplasmic part;4.90243928542924e-111!GO:0043170;macromolecule metabolic process;3.1447886983003e-99!GO:0044238;primary metabolic process;1.67757962391504e-98!GO:0044237;cellular metabolic process;1.3474437145944e-97!GO:0032991;macromolecular complex;4.77558854191208e-96!GO:0005634;nucleus;5.44628726052564e-93!GO:0030529;ribonucleoprotein complex;7.85236236296303e-79!GO:0044428;nuclear part;1.29777568807399e-71!GO:0043233;organelle lumen;3.89913920041236e-69!GO:0031974;membrane-enclosed lumen;3.89913920041236e-69!GO:0003723;RNA binding;1.58997292574545e-67!GO:0043283;biopolymer metabolic process;6.10826061766053e-64!GO:0005515;protein binding;2.65741835714115e-61!GO:0010467;gene expression;1.04612730730669e-58!GO:0005739;mitochondrion;3.56906885639191e-58!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.92084461177102e-54!GO:0033036;macromolecule localization;3.27419939234993e-52!GO:0015031;protein transport;1.48052095512867e-51!GO:0006396;RNA processing;1.02260489474201e-50!GO:0045184;establishment of protein localization;4.1213711889144e-49!GO:0043234;protein complex;4.1213711889144e-49!GO:0019538;protein metabolic process;1.27078997528864e-48!GO:0008104;protein localization;7.95527691109678e-48!GO:0006412;translation;8.73697332045504e-48!GO:0016071;mRNA metabolic process;7.05758701761603e-45!GO:0031981;nuclear lumen;4.93186583302185e-44!GO:0031090;organelle membrane;8.85039367627554e-44!GO:0044429;mitochondrial part;2.49830878741155e-43!GO:0044267;cellular protein metabolic process;2.67257751466726e-43!GO:0005840;ribosome;6.07279479484885e-43!GO:0044260;cellular macromolecule metabolic process;6.48302206904294e-43!GO:0008380;RNA splicing;3.30747806102906e-40!GO:0005829;cytosol;8.04263836848216e-39!GO:0006397;mRNA processing;9.69296759129661e-39!GO:0031967;organelle envelope;3.24504125623938e-38!GO:0031975;envelope;5.27562788706927e-38!GO:0046907;intracellular transport;1.40720896540989e-37!GO:0003735;structural constituent of ribosome;3.49458567085948e-37!GO:0016043;cellular component organization and biogenesis;5.21312650545617e-37!GO:0003676;nucleic acid binding;1.59712957513432e-36!GO:0009059;macromolecule biosynthetic process;3.13141569749263e-36!GO:0006886;intracellular protein transport;4.63616213287167e-34!GO:0009058;biosynthetic process;2.30081543275961e-33!GO:0044249;cellular biosynthetic process;3.64967854498324e-33!GO:0016070;RNA metabolic process;1.04374304477473e-32!GO:0033279;ribosomal subunit;2.01916117801842e-32!GO:0065003;macromolecular complex assembly;2.9097112897127e-30!GO:0005654;nucleoplasm;8.10940931415889e-29!GO:0005681;spliceosome;8.7609972747416e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.30940118369726e-28!GO:0005740;mitochondrial envelope;3.35122735353131e-27!GO:0006996;organelle organization and biogenesis;5.12994158520501e-26!GO:0022607;cellular component assembly;7.07007960694492e-26!GO:0051649;establishment of cellular localization;1.17352369443657e-25!GO:0031966;mitochondrial membrane;1.23081649869561e-25!GO:0019866;organelle inner membrane;4.28374067978687e-25!GO:0051641;cellular localization;5.3086923121486e-25!GO:0006259;DNA metabolic process;1.13589756002905e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.09349435871869e-24!GO:0044445;cytosolic part;8.42663358667663e-24!GO:0000166;nucleotide binding;3.97609800283856e-23!GO:0044451;nucleoplasm part;5.48774647397202e-23!GO:0005743;mitochondrial inner membrane;6.94870909924571e-23!GO:0016462;pyrophosphatase activity;3.53731232009079e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.6369854389844e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;5.04764072316069e-22!GO:0006512;ubiquitin cycle;6.64737161214498e-22!GO:0043228;non-membrane-bound organelle;9.45386185019834e-22!GO:0043232;intracellular non-membrane-bound organelle;9.45386185019834e-22!GO:0017111;nucleoside-triphosphatase activity;1.96790722514137e-21!GO:0048770;pigment granule;3.02388394425092e-21!GO:0042470;melanosome;3.02388394425092e-21!GO:0006119;oxidative phosphorylation;3.82249999298601e-21!GO:0044265;cellular macromolecule catabolic process;4.19466785702768e-21!GO:0008134;transcription factor binding;5.48819942447431e-20!GO:0012501;programmed cell death;6.56858805349083e-20!GO:0006915;apoptosis;7.98509783349611e-20!GO:0016874;ligase activity;1.07234367977275e-19!GO:0043285;biopolymer catabolic process;2.83876729878369e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;3.63184801996772e-19!GO:0031980;mitochondrial lumen;4.28001115513472e-19!GO:0005759;mitochondrial matrix;4.28001115513472e-19!GO:0006511;ubiquitin-dependent protein catabolic process;4.85180414278189e-19!GO:0019941;modification-dependent protein catabolic process;5.32081576370999e-19!GO:0043632;modification-dependent macromolecule catabolic process;5.32081576370999e-19!GO:0022618;protein-RNA complex assembly;6.14417778919887e-19!GO:0008219;cell death;7.47559167891759e-19!GO:0016265;death;7.47559167891759e-19!GO:0009057;macromolecule catabolic process;1.0534681350607e-18!GO:0044257;cellular protein catabolic process;1.34546665926727e-18!GO:0044455;mitochondrial membrane part;6.08099412548464e-18!GO:0006457;protein folding;6.08099412548464e-18!GO:0032553;ribonucleotide binding;2.93933682904367e-17!GO:0032555;purine ribonucleotide binding;2.93933682904367e-17!GO:0044248;cellular catabolic process;3.82065355706993e-17!GO:0015934;large ribosomal subunit;6.87760245286494e-17!GO:0017076;purine nucleotide binding;1.61395189338241e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.6951522886261e-16!GO:0005730;nucleolus;1.70490534230703e-16!GO:0016604;nuclear body;2.27999289232723e-16!GO:0030163;protein catabolic process;2.43701802470758e-16!GO:0012505;endomembrane system;2.95362725396188e-16!GO:0015935;small ribosomal subunit;3.41767362313964e-16!GO:0043412;biopolymer modification;7.74293280994843e-16!GO:0006974;response to DNA damage stimulus;1.37066159969233e-15!GO:0006605;protein targeting;2.09555492537421e-15!GO:0050794;regulation of cellular process;3.20288303876277e-15!GO:0008135;translation factor activity, nucleic acid binding;6.42324121954801e-15!GO:0005746;mitochondrial respiratory chain;7.18447199607653e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;2.06917267235621e-14!GO:0000375;RNA splicing, via transesterification reactions;2.06917267235621e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.06917267235621e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.09120568311753e-14!GO:0051186;cofactor metabolic process;3.79149413719878e-14!GO:0048193;Golgi vesicle transport;5.97979005985873e-14!GO:0016607;nuclear speck;6.51518008015057e-14!GO:0006464;protein modification process;8.64753149922237e-14!GO:0005794;Golgi apparatus;8.76960968979307e-14!GO:0005524;ATP binding;8.78693440887375e-14!GO:0032559;adenyl ribonucleotide binding;1.33731382904884e-13!GO:0016887;ATPase activity;1.93792519439802e-13!GO:0003712;transcription cofactor activity;1.93896187956969e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.45053453549482e-13!GO:0003954;NADH dehydrogenase activity;2.45053453549482e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.45053453549482e-13!GO:0006281;DNA repair;3.08853856476823e-13!GO:0042623;ATPase activity, coupled;3.41973209843646e-13!GO:0043687;post-translational protein modification;5.90769356360206e-13!GO:0030554;adenyl nucleotide binding;8.07244404932689e-13!GO:0008565;protein transporter activity;1.01077920321942e-12!GO:0042981;regulation of apoptosis;1.07156653900383e-12!GO:0043067;regulation of programmed cell death;1.40969733949926e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.57225659912507e-12!GO:0006913;nucleocytoplasmic transport;1.93052474876627e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.70463736414163e-12!GO:0051082;unfolded protein binding;3.0463890386568e-12!GO:0051169;nuclear transport;3.55452830175498e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.35332564818305e-12!GO:0042773;ATP synthesis coupled electron transport;4.35332564818305e-12!GO:0005761;mitochondrial ribosome;5.38677249332642e-12!GO:0000313;organellar ribosome;5.38677249332642e-12!GO:0005635;nuclear envelope;5.65984178185316e-12!GO:0019787;small conjugating protein ligase activity;7.9548773349906e-12!GO:0030964;NADH dehydrogenase complex (quinone);8.38715276954424e-12!GO:0045271;respiratory chain complex I;8.38715276954424e-12!GO:0005747;mitochondrial respiratory chain complex I;8.38715276954424e-12!GO:0003743;translation initiation factor activity;1.00792002647339e-11!GO:0008639;small protein conjugating enzyme activity;1.01115084419089e-11!GO:0006732;coenzyme metabolic process;1.30737578578587e-11!GO:0006413;translational initiation;1.5193261970891e-11!GO:0019222;regulation of metabolic process;1.61116177189254e-11!GO:0004842;ubiquitin-protein ligase activity;1.75792254142639e-11!GO:0016192;vesicle-mediated transport;2.25340238419079e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.42814654692476e-11!GO:0004386;helicase activity;3.42593006822056e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.88997188785681e-11!GO:0044453;nuclear membrane part;4.53163014743149e-11!GO:0007049;cell cycle;4.75907036602143e-11!GO:0050657;nucleic acid transport;5.22365866721932e-11!GO:0051236;establishment of RNA localization;5.22365866721932e-11!GO:0050658;RNA transport;5.22365866721932e-11!GO:0009056;catabolic process;5.40378477429694e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;5.68355214779148e-11!GO:0006403;RNA localization;8.04691685335538e-11!GO:0051276;chromosome organization and biogenesis;9.07039028015625e-11!GO:0005773;vacuole;1.03853418512514e-10!GO:0006446;regulation of translational initiation;1.23267052372016e-10!GO:0009719;response to endogenous stimulus;1.50446144662556e-10!GO:0031965;nuclear membrane;1.71239788739116e-10!GO:0008026;ATP-dependent helicase activity;1.85234317654495e-10!GO:0006323;DNA packaging;2.34571440088308e-10!GO:0042254;ribosome biogenesis and assembly;2.40680302494648e-10!GO:0016881;acid-amino acid ligase activity;3.6715537294803e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.33671976705518e-10!GO:0000323;lytic vacuole;4.70227202623086e-10!GO:0005764;lysosome;4.70227202623086e-10!GO:0005643;nuclear pore;5.30891687226386e-10!GO:0050789;regulation of biological process;6.70981323376353e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.27069906406217e-09!GO:0043069;negative regulation of programmed cell death;1.58676436210231e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.61923202915694e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.0985510173648e-09!GO:0043066;negative regulation of apoptosis;2.50760307355194e-09!GO:0051028;mRNA transport;2.8104018578274e-09!GO:0031323;regulation of cellular metabolic process;2.96373353703953e-09!GO:0009259;ribonucleotide metabolic process;3.31343754062627e-09!GO:0065002;intracellular protein transport across a membrane;3.59000396138993e-09!GO:0006461;protein complex assembly;3.94812821103087e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.15298035374793e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.661734073196e-09!GO:0005783;endoplasmic reticulum;4.7533156660445e-09!GO:0006399;tRNA metabolic process;4.92187113713613e-09!GO:0006366;transcription from RNA polymerase II promoter;5.35979888188876e-09!GO:0005768;endosome;7.05358804112991e-09!GO:0006350;transcription;1.01166998842515e-08!GO:0006163;purine nucleotide metabolic process;1.04663970446288e-08!GO:0016787;hydrolase activity;1.11373029385009e-08!GO:0016568;chromatin modification;1.31979411666276e-08!GO:0009055;electron carrier activity;1.32658275683061e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.36304934144348e-08!GO:0009150;purine ribonucleotide metabolic process;1.48383089449978e-08!GO:0009260;ribonucleotide biosynthetic process;1.91100902231562e-08!GO:0006164;purine nucleotide biosynthetic process;1.96607709666001e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.05940626932359e-08!GO:0015986;ATP synthesis coupled proton transport;2.08364996131397e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.08364996131397e-08!GO:0017038;protein import;2.37990670082043e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.63788057518054e-08!GO:0044432;endoplasmic reticulum part;3.22984862268146e-08!GO:0003713;transcription coactivator activity;3.41283735171198e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.4597213711179e-08!GO:0051188;cofactor biosynthetic process;3.73651294779476e-08!GO:0006916;anti-apoptosis;4.07701256987908e-08!GO:0010468;regulation of gene expression;4.90651081114735e-08!GO:0005694;chromosome;5.05595894802953e-08!GO:0046930;pore complex;5.20741427413557e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.18238168484533e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.18238168484533e-08!GO:0030532;small nuclear ribonucleoprotein complex;6.44166526133407e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.80632514527279e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.80632514527279e-08!GO:0019829;cation-transporting ATPase activity;7.42975045418451e-08!GO:0048475;coated membrane;8.50866571781727e-08!GO:0030117;membrane coat;8.50866571781727e-08!GO:0030120;vesicle coat;8.50866571781727e-08!GO:0030662;coated vesicle membrane;8.50866571781727e-08!GO:0051246;regulation of protein metabolic process;8.91866064617286e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.01378772944697e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.01378772944697e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.01378772944697e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.11687089183085e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.1775561143508e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.20595872821106e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.2562003472024e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.2562003472024e-07!GO:0043038;amino acid activation;1.3118663417739e-07!GO:0006418;tRNA aminoacylation for protein translation;1.3118663417739e-07!GO:0043039;tRNA aminoacylation;1.3118663417739e-07!GO:0003924;GTPase activity;1.87885092451571e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.9106624386737e-07!GO:0022402;cell cycle process;2.18609347583415e-07!GO:0009141;nucleoside triphosphate metabolic process;2.92794956795165e-07!GO:0008270;zinc ion binding;3.04036551989955e-07!GO:0006754;ATP biosynthetic process;3.04036551989955e-07!GO:0006753;nucleoside phosphate metabolic process;3.04036551989955e-07!GO:0006793;phosphorus metabolic process;3.09874333346391e-07!GO:0006796;phosphate metabolic process;3.09874333346391e-07!GO:0007243;protein kinase cascade;3.60575910426889e-07!GO:0043566;structure-specific DNA binding;3.89433598516509e-07!GO:0000245;spliceosome assembly;4.25309971480897e-07!GO:0005770;late endosome;4.29405655656695e-07!GO:0007005;mitochondrion organization and biogenesis;4.57895756824709e-07!GO:0009060;aerobic respiration;4.64506716097872e-07!GO:0004298;threonine endopeptidase activity;4.82467290170593e-07!GO:0006364;rRNA processing;5.03971755577192e-07!GO:0051168;nuclear export;5.101553287109e-07!GO:0006333;chromatin assembly or disassembly;5.28894514825732e-07!GO:0032774;RNA biosynthetic process;5.48213585495441e-07!GO:0006351;transcription, DNA-dependent;6.48407270639527e-07!GO:0007264;small GTPase mediated signal transduction;7.69015681913122e-07!GO:0046034;ATP metabolic process;7.76514299563916e-07!GO:0048523;negative regulation of cellular process;7.87410877317843e-07!GO:0045333;cellular respiration;8.88762710910739e-07!GO:0016072;rRNA metabolic process;1.03117197372369e-06!GO:0009108;coenzyme biosynthetic process;1.04274372839903e-06!GO:0065004;protein-DNA complex assembly;1.08288001615019e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.18791290739381e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.30632822799361e-06!GO:0003697;single-stranded DNA binding;1.41361219178981e-06!GO:0005798;Golgi-associated vesicle;1.46168372227529e-06!GO:0044431;Golgi apparatus part;1.65208136345125e-06!GO:0044427;chromosomal part;1.68194158706705e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.76513144065943e-06!GO:0006260;DNA replication;1.97250162575324e-06!GO:0006752;group transfer coenzyme metabolic process;2.1046901846153e-06!GO:0051427;hormone receptor binding;2.1706163239668e-06!GO:0032446;protein modification by small protein conjugation;2.1706163239668e-06!GO:0016563;transcription activator activity;2.61908579947466e-06!GO:0051726;regulation of cell cycle;3.15769295593568e-06!GO:0031988;membrane-bound vesicle;3.44543398476939e-06!GO:0016564;transcription repressor activity;3.49915785655506e-06!GO:0000074;regulation of progression through cell cycle;3.52641968209289e-06!GO:0051170;nuclear import;3.59256428713283e-06!GO:0044440;endosomal part;3.59256428713283e-06!GO:0010008;endosome membrane;3.59256428713283e-06!GO:0003724;RNA helicase activity;3.76467747534175e-06!GO:0000785;chromatin;3.77873743906792e-06!GO:0042613;MHC class II protein complex;3.95939264884827e-06!GO:0000151;ubiquitin ligase complex;4.29313563978146e-06!GO:0035257;nuclear hormone receptor binding;4.78371717032306e-06!GO:0005525;GTP binding;4.97169193044956e-06!GO:0045449;regulation of transcription;4.97169193044956e-06!GO:0016567;protein ubiquitination;5.00526484740669e-06!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;5.49372689487486e-06!GO:0005793;ER-Golgi intermediate compartment;5.71777569535173e-06!GO:0065007;biological regulation;6.25080274830992e-06!GO:0006099;tricarboxylic acid cycle;6.77695068857875e-06!GO:0046356;acetyl-CoA catabolic process;6.77695068857875e-06!GO:0016310;phosphorylation;7.9943374097729e-06!GO:0045259;proton-transporting ATP synthase complex;8.14568780211885e-06!GO:0003714;transcription corepressor activity;8.58069254483267e-06!GO:0006606;protein import into nucleus;9.09765907543395e-06!GO:0016023;cytoplasmic membrane-bound vesicle;9.83442003696539e-06!GO:0051187;cofactor catabolic process;9.96595170606601e-06!GO:0031982;vesicle;1.02217160315735e-05!GO:0048471;perinuclear region of cytoplasm;1.05228910661859e-05!GO:0006613;cotranslational protein targeting to membrane;1.06883151735181e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.14803538269181e-05!GO:0005789;endoplasmic reticulum membrane;1.26137373496918e-05!GO:0006084;acetyl-CoA metabolic process;1.29729796753046e-05!GO:0009117;nucleotide metabolic process;1.39994142211273e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.40988170056999e-05!GO:0048519;negative regulation of biological process;1.55874542695974e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.16403499646269e-05!GO:0015399;primary active transmembrane transporter activity;2.16403499646269e-05!GO:0006355;regulation of transcription, DNA-dependent;2.90983542328211e-05!GO:0005774;vacuolar membrane;2.917874721571e-05!GO:0046914;transition metal ion binding;3.15978468715204e-05!GO:0016779;nucleotidyltransferase activity;3.34165890443553e-05!GO:0009109;coenzyme catabolic process;3.42129852215738e-05!GO:0031324;negative regulation of cellular metabolic process;3.60898755013987e-05!GO:0031410;cytoplasmic vesicle;3.61351119452839e-05!GO:0031252;leading edge;4.5163849431251e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;4.55346860914385e-05!GO:0007242;intracellular signaling cascade;4.75653686127892e-05!GO:0032561;guanyl ribonucleotide binding;4.86452626008705e-05!GO:0019001;guanyl nucleotide binding;4.86452626008705e-05!GO:0019899;enzyme binding;5.73803594776064e-05!GO:0045786;negative regulation of progression through cell cycle;6.75520577114525e-05!GO:0006402;mRNA catabolic process;7.06846915159906e-05!GO:0008234;cysteine-type peptidase activity;7.16466528090883e-05!GO:0005813;centrosome;7.4362489366562e-05!GO:0008186;RNA-dependent ATPase activity;9.3773905866528e-05!GO:0006612;protein targeting to membrane;9.61551204452631e-05!GO:0005765;lysosomal membrane;9.76602526529603e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000104562275530291!GO:0016740;transferase activity;0.000121635638976006!GO:0044437;vacuolar part;0.00012285581831026!GO:0003729;mRNA binding;0.000138736968628918!GO:0043021;ribonucleoprotein binding;0.000144599656611082!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000157093611929358!GO:0005885;Arp2/3 protein complex;0.000162391204197689!GO:0007265;Ras protein signal transduction;0.000165066582275861!GO:0003677;DNA binding;0.000165066582275861!GO:0009892;negative regulation of metabolic process;0.000189719839807791!GO:0006401;RNA catabolic process;0.000189876321722491!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000202861474590955!GO:0031072;heat shock protein binding;0.000217345320855103!GO:0005815;microtubule organizing center;0.000218941584059022!GO:0005762;mitochondrial large ribosomal subunit;0.000236301271387701!GO:0000315;organellar large ribosomal subunit;0.000236301271387701!GO:0048522;positive regulation of cellular process;0.000243336206703689!GO:0000139;Golgi membrane;0.000257069840910397!GO:0000278;mitotic cell cycle;0.000276892251399665!GO:0006891;intra-Golgi vesicle-mediated transport;0.00028315132486367!GO:0004004;ATP-dependent RNA helicase activity;0.000289322335367123!GO:0030521;androgen receptor signaling pathway;0.000296846742702194!GO:0048468;cell development;0.00030975302560301!GO:0016481;negative regulation of transcription;0.000323287573973622!GO:0009165;nucleotide biosynthetic process;0.000334433206757635!GO:0043623;cellular protein complex assembly;0.000370198247596831!GO:0065009;regulation of a molecular function;0.000385069195398057!GO:0015630;microtubule cytoskeleton;0.000392739718366085!GO:0006417;regulation of translation;0.000403026699757645!GO:0016197;endosome transport;0.000405956064383269!GO:0043492;ATPase activity, coupled to movement of substances;0.00041018558285759!GO:0009967;positive regulation of signal transduction;0.000421704973430371!GO:0003899;DNA-directed RNA polymerase activity;0.00045093775719575!GO:0032395;MHC class II receptor activity;0.000483513468948822!GO:0008654;phospholipid biosynthetic process;0.000491845264105305!GO:0043065;positive regulation of apoptosis;0.00050087025779845!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000506107592881831!GO:0030658;transport vesicle membrane;0.000538772876874561!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000542886738956924!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000558702818340418!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000577788119115076!GO:0006334;nucleosome assembly;0.00058183964408302!GO:0016363;nuclear matrix;0.000582152432940931!GO:0043068;positive regulation of programmed cell death;0.00066600646234401!GO:0005083;small GTPase regulator activity;0.000681087167420375!GO:0003690;double-stranded DNA binding;0.000682074953617857!GO:0005048;signal sequence binding;0.000682471629046927!GO:0000209;protein polyubiquitination;0.000682471629046927!GO:0051789;response to protein stimulus;0.000682471629046927!GO:0006986;response to unfolded protein;0.000682471629046927!GO:0046966;thyroid hormone receptor binding;0.000701660658050079!GO:0031902;late endosome membrane;0.000701755768213659!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000737291816829585!GO:0035258;steroid hormone receptor binding;0.000777772558523593!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000787227617125905!GO:0005741;mitochondrial outer membrane;0.000889984732894383!GO:0031497;chromatin assembly;0.000890011331498975!GO:0006302;double-strand break repair;0.000929470631985024!GO:0006917;induction of apoptosis;0.000940055381334337!GO:0006261;DNA-dependent DNA replication;0.000940893916627053!GO:0016251;general RNA polymerase II transcription factor activity;0.000942241591001244!GO:0006818;hydrogen transport;0.00094950358255663!GO:0006611;protein export from nucleus;0.00101433078130389!GO:0015992;proton transport;0.00113865230560866!GO:0001726;ruffle;0.00115200870379814!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00115200870379814!GO:0005788;endoplasmic reticulum lumen;0.0012880713311479!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00131674139864622!GO:0012502;induction of programmed cell death;0.0013425708035726!GO:0030663;COPI coated vesicle membrane;0.00138083016769452!GO:0030126;COPI vesicle coat;0.00138083016769452!GO:0006091;generation of precursor metabolites and energy;0.00138408432940795!GO:0006310;DNA recombination;0.00142976903703311!GO:0016859;cis-trans isomerase activity;0.00146324224816039!GO:0008637;apoptotic mitochondrial changes;0.00146324224816039!GO:0043087;regulation of GTPase activity;0.00155105876209769!GO:0045454;cell redox homeostasis;0.0015523447208024!GO:0004674;protein serine/threonine kinase activity;0.00166024726015977!GO:0015980;energy derivation by oxidation of organic compounds;0.00167297524681628!GO:0030118;clathrin coat;0.00167402780724701!GO:0030659;cytoplasmic vesicle membrane;0.0017152739609947!GO:0006352;transcription initiation;0.00174141962221916!GO:0012506;vesicle membrane;0.00179166684157434!GO:0006289;nucleotide-excision repair;0.00179881566757993!GO:0030137;COPI-coated vesicle;0.00181805565353972!GO:0005667;transcription factor complex;0.00183436299531433!GO:0030660;Golgi-associated vesicle membrane;0.00183436299531433!GO:0030384;phosphoinositide metabolic process;0.00183436299531433!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00190975865529506!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00190975865529506!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00190975865529506!GO:0000314;organellar small ribosomal subunit;0.00195415695055378!GO:0005763;mitochondrial small ribosomal subunit;0.00195415695055378!GO:0030518;steroid hormone receptor signaling pathway;0.00199037589789967!GO:0051252;regulation of RNA metabolic process;0.00204511417370462!GO:0051052;regulation of DNA metabolic process;0.00207888457767559!GO:0003678;DNA helicase activity;0.00209123595529961!GO:0006383;transcription from RNA polymerase III promoter;0.00211694641231834!GO:0006405;RNA export from nucleus;0.00213341438242019!GO:0043681;protein import into mitochondrion;0.00215147641328706!GO:0042802;identical protein binding;0.00216127491807389!GO:0046489;phosphoinositide biosynthetic process;0.00222088791897441!GO:0031968;organelle outer membrane;0.0022679087373804!GO:0006626;protein targeting to mitochondrion;0.00227230023073372!GO:0048500;signal recognition particle;0.00227581393803996!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0022808745932966!GO:0005769;early endosome;0.00232210631842651!GO:0006650;glycerophospholipid metabolic process;0.00234331668803877!GO:0007034;vacuolar transport;0.00239882451318914!GO:0015631;tubulin binding;0.00244051854805767!GO:0005099;Ras GTPase activator activity;0.00251295874131528!GO:0031326;regulation of cellular biosynthetic process;0.00253758114857696!GO:0051087;chaperone binding;0.00260478332698641!GO:0022403;cell cycle phase;0.00270611397552911!GO:0016853;isomerase activity;0.00280211889020269!GO:0003682;chromatin binding;0.00282541266545436!GO:0046483;heterocycle metabolic process;0.00283530765285473!GO:0005637;nuclear inner membrane;0.00284673710203834!GO:0016491;oxidoreductase activity;0.00285857543506267!GO:0045045;secretory pathway;0.00297099777670911!GO:0006414;translational elongation;0.00315998006237845!GO:0016272;prefoldin complex;0.00322570333895434!GO:0019867;outer membrane;0.0033532409364296!GO:0045892;negative regulation of transcription, DNA-dependent;0.00335983236089718!GO:0030134;ER to Golgi transport vesicle;0.00362845023812765!GO:0030880;RNA polymerase complex;0.00363828673469638!GO:0003711;transcription elongation regulator activity;0.0037670115627946!GO:0022406;membrane docking;0.0038576731509201!GO:0048278;vesicle docking;0.0038576731509201!GO:0000059;protein import into nucleus, docking;0.00394280661922781!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00395611115408235!GO:0045047;protein targeting to ER;0.00395611115408235!GO:0030133;transport vesicle;0.00395760751649974!GO:0005684;U2-dependent spliceosome;0.00410675392255843!GO:0008033;tRNA processing;0.00416987868563508!GO:0008139;nuclear localization sequence binding;0.00421425368287206!GO:0030127;COPII vesicle coat;0.00432925977023675!GO:0012507;ER to Golgi transport vesicle membrane;0.00432925977023675!GO:0008320;protein transmembrane transporter activity;0.00448273520537195!GO:0008632;apoptotic program;0.00473263456654561!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00477240119537219!GO:0007006;mitochondrial membrane organization and biogenesis;0.00478393028369812!GO:0044433;cytoplasmic vesicle part;0.00479938579530016!GO:0019783;small conjugating protein-specific protease activity;0.00529855245806523!GO:0006839;mitochondrial transport;0.00537282127442798!GO:0004843;ubiquitin-specific protease activity;0.00557655557188845!GO:0050681;androgen receptor binding;0.00565819306396138!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00574360728445847!GO:0008312;7S RNA binding;0.00587853602908473!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00602120016534551!GO:0006338;chromatin remodeling;0.00605446075201542!GO:0006904;vesicle docking during exocytosis;0.00608659652445768!GO:0051920;peroxiredoxin activity;0.00620767877399219!GO:0030119;AP-type membrane coat adaptor complex;0.00625248085539074!GO:0007021;tubulin folding;0.00627177167612933!GO:0030867;rough endoplasmic reticulum membrane;0.00646013467430762!GO:0030695;GTPase regulator activity;0.00656277594375713!GO:0007050;cell cycle arrest;0.00664757956894278!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00680997592436825!GO:0000428;DNA-directed RNA polymerase complex;0.00680997592436825!GO:0046474;glycerophospholipid biosynthetic process;0.00705997455091732!GO:0044262;cellular carbohydrate metabolic process;0.00743114144361768!GO:0008287;protein serine/threonine phosphatase complex;0.00747532389784147!GO:0005777;peroxisome;0.00783836270059082!GO:0042579;microbody;0.00783836270059082!GO:0004221;ubiquitin thiolesterase activity;0.00790310624949755!GO:0030131;clathrin adaptor complex;0.00790310624949755!GO:0006376;mRNA splice site selection;0.00795535895151441!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00795535895151441!GO:0008047;enzyme activator activity;0.00797086636231612!GO:0032940;secretion by cell;0.00831672391117383!GO:0000087;M phase of mitotic cell cycle;0.00836974212338277!GO:0008094;DNA-dependent ATPase activity;0.00845244323451764!GO:0004003;ATP-dependent DNA helicase activity;0.00880820574298141!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00954793148230216!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00957801962620859!GO:0004527;exonuclease activity;0.00966007889768339!GO:0044452;nucleolar part;0.00966007889768339!GO:0030036;actin cytoskeleton organization and biogenesis;0.00966007889768339!GO:0048487;beta-tubulin binding;0.0100959759463553!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.010332346851854!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.010332346851854!GO:0042611;MHC protein complex;0.0104778534705696!GO:0007040;lysosome organization and biogenesis;0.0104803795110821!GO:0031625;ubiquitin protein ligase binding;0.010682381307161!GO:0032318;regulation of Ras GTPase activity;0.010712021318704!GO:0007067;mitosis;0.0108360932776037!GO:0043488;regulation of mRNA stability;0.0109893726564538!GO:0043487;regulation of RNA stability;0.0109893726564538!GO:0008250;oligosaccharyl transferase complex;0.0110725875075422!GO:0016281;eukaryotic translation initiation factor 4F complex;0.011214125996391!GO:0030258;lipid modification;0.0112752107059287!GO:0016584;nucleosome positioning;0.0115446344856814!GO:0009889;regulation of biosynthetic process;0.0121559459907422!GO:0008022;protein C-terminus binding;0.0124815064973108!GO:0046578;regulation of Ras protein signal transduction;0.0125616227291335!GO:0032200;telomere organization and biogenesis;0.012568638100814!GO:0000723;telomere maintenance;0.012568638100814!GO:0004177;aminopeptidase activity;0.0128285323043435!GO:0044438;microbody part;0.0130913002683082!GO:0044439;peroxisomal part;0.0130913002683082!GO:0007041;lysosomal transport;0.0132506906907143!GO:0005869;dynactin complex;0.0132922273726989!GO:0006607;NLS-bearing substrate import into nucleus;0.0134513659888392!GO:0048518;positive regulation of biological process;0.0135171827364567!GO:0030041;actin filament polymerization;0.0135427954166145!GO:0051101;regulation of DNA binding;0.0137053042537039!GO:0004518;nuclease activity;0.0137671934363007!GO:0004197;cysteine-type endopeptidase activity;0.013886914653648!GO:0006740;NADPH regeneration;0.013886914653648!GO:0006098;pentose-phosphate shunt;0.013886914653648!GO:0050790;regulation of catalytic activity;0.0139704098358951!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0144052046228042!GO:0016311;dephosphorylation;0.0148175487541831!GO:0000287;magnesium ion binding;0.014903606945678!GO:0016791;phosphoric monoester hydrolase activity;0.0150215486559449!GO:0006635;fatty acid beta-oxidation;0.0151751317478451!GO:0004860;protein kinase inhibitor activity;0.0152471033451235!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0152498626290791!GO:0015002;heme-copper terminal oxidase activity;0.0152498626290791!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0152498626290791!GO:0004129;cytochrome-c oxidase activity;0.0152498626290791!GO:0016044;membrane organization and biogenesis;0.0160278214355565!GO:0006007;glucose catabolic process;0.0161540298515196!GO:0046467;membrane lipid biosynthetic process;0.0161625987889349!GO:0031124;mRNA 3'-end processing;0.0162342407144785!GO:0004576;oligosaccharyl transferase activity;0.0164177133492145!GO:0030522;intracellular receptor-mediated signaling pathway;0.0165559944650106!GO:0030125;clathrin vesicle coat;0.0168073775176114!GO:0030665;clathrin coated vesicle membrane;0.0168073775176114!GO:0006672;ceramide metabolic process;0.017313749865768!GO:0043022;ribosome binding;0.0173977781342044!GO:0051301;cell division;0.0175412687518045!GO:0018193;peptidyl-amino acid modification;0.0176841549768742!GO:0016790;thiolester hydrolase activity;0.0178004697925768!GO:0006769;nicotinamide metabolic process;0.0178546064204564!GO:0033116;ER-Golgi intermediate compartment membrane;0.0178728141156445!GO:0008017;microtubule binding;0.0179338274888682!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0185534005477977!GO:0030029;actin filament-based process;0.0187190796154723!GO:0031903;microbody membrane;0.0193878989720455!GO:0005778;peroxisomal membrane;0.0193878989720455!GO:0006778;porphyrin metabolic process;0.0197688594977863!GO:0033013;tetrapyrrole metabolic process;0.0197688594977863!GO:0042158;lipoprotein biosynthetic process;0.0198994786463049!GO:0019318;hexose metabolic process;0.0199902413948769!GO:0045893;positive regulation of transcription, DNA-dependent;0.0200344935980228!GO:0022890;inorganic cation transmembrane transporter activity;0.0204771445672151!GO:0001891;phagocytic cup;0.0204852478219732!GO:0051059;NF-kappaB binding;0.0205674770457325!GO:0009966;regulation of signal transduction;0.0205954354160936!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0207475125517557!GO:0046365;monosaccharide catabolic process;0.0208138420074331!GO:0051098;regulation of binding;0.021017739077621!GO:0007033;vacuole organization and biogenesis;0.0211492090947436!GO:0001836;release of cytochrome c from mitochondria;0.0214467188502521!GO:0046519;sphingoid metabolic process;0.0214812685632153!GO:0042440;pigment metabolic process;0.02157713443115!GO:0019362;pyridine nucleotide metabolic process;0.0219266759025006!GO:0000726;non-recombinational repair;0.0220855458969458!GO:0005996;monosaccharide metabolic process;0.0222055698662708!GO:0042168;heme metabolic process;0.0223463827285149!GO:0003746;translation elongation factor activity;0.0232451574195047!GO:0000049;tRNA binding;0.0232451574195047!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0232451574195047!GO:0042585;germinal vesicle;0.0232653691291584!GO:0000075;cell cycle checkpoint;0.0234192549838041!GO:0018196;peptidyl-asparagine modification;0.0236163069209284!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0236163069209284!GO:0006497;protein amino acid lipidation;0.0236642169158332!GO:0005096;GTPase activator activity;0.0238386818056439!GO:0000119;mediator complex;0.0239403689946465!GO:0045941;positive regulation of transcription;0.0241119475270759!GO:0051325;interphase;0.0241119475270759!GO:0000279;M phase;0.0244916317604643!GO:0004300;enoyl-CoA hydratase activity;0.0245828541169503!GO:0033673;negative regulation of kinase activity;0.0250707395679021!GO:0006469;negative regulation of protein kinase activity;0.0250707395679021!GO:0000018;regulation of DNA recombination;0.025091615314022!GO:0009615;response to virus;0.025091615314022!GO:0000738;DNA catabolic process, exonucleolytic;0.0253540945766437!GO:0008092;cytoskeletal protein binding;0.0255380849214368!GO:0050662;coenzyme binding;0.0258358222112927!GO:0031123;RNA 3'-end processing;0.0260049640671328!GO:0022884;macromolecule transmembrane transporter activity;0.0263442823089519!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0263442823089519!GO:0007004;telomere maintenance via telomerase;0.0264083841001817!GO:0006661;phosphatidylinositol biosynthetic process;0.0264785140102961!GO:0016407;acetyltransferase activity;0.0267804451668776!GO:0016788;hydrolase activity, acting on ester bonds;0.0267804451668776!GO:0030176;integral to endoplasmic reticulum membrane;0.0269858372474957!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0272630442682381!GO:0030433;ER-associated protein catabolic process;0.0272630442682381!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0272630442682381!GO:0003684;damaged DNA binding;0.0272959918712159!GO:0032984;macromolecular complex disassembly;0.0274673602793886!GO:0005669;transcription factor TFIID complex;0.0275217594486479!GO:0051539;4 iron, 4 sulfur cluster binding;0.0276967954579826!GO:0047485;protein N-terminus binding;0.0279462906328979!GO:0051329;interphase of mitotic cell cycle;0.0279462906328979!GO:0050811;GABA receptor binding;0.0283959534345127!GO:0043414;biopolymer methylation;0.029359543691563!GO:0051336;regulation of hydrolase activity;0.0293756942578314!GO:0031371;ubiquitin conjugating enzyme complex;0.0297945758430126!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0297945758430126!GO:0019377;glycolipid catabolic process;0.0299567395364785!GO:0005097;Rab GTPase activator activity;0.0300859099203463!GO:0005850;eukaryotic translation initiation factor 2 complex;0.03065919015124!GO:0046164;alcohol catabolic process;0.0306977835837572!GO:0019320;hexose catabolic process;0.0308247408048829!GO:0046426;negative regulation of JAK-STAT cascade;0.0312343131032843!GO:0005657;replication fork;0.031365197645456!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0314302045954906!GO:0019210;kinase inhibitor activity;0.0314753459585191!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0320041120396043!GO:0019752;carboxylic acid metabolic process;0.0322828794384235!GO:0042809;vitamin D receptor binding;0.032560617891167!GO:0016741;transferase activity, transferring one-carbon groups;0.0325935473402291!GO:0003725;double-stranded RNA binding;0.0328315979602064!GO:0043130;ubiquitin binding;0.033156178573716!GO:0032182;small conjugating protein binding;0.033156178573716!GO:0008168;methyltransferase activity;0.033156178573716!GO:0008629;induction of apoptosis by intracellular signals;0.0333273596080377!GO:0022411;cellular component disassembly;0.0333514764960993!GO:0005819;spindle;0.0336437978590837!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0340883467607042!GO:0005832;chaperonin-containing T-complex;0.0341042254916518!GO:0006643;membrane lipid metabolic process;0.0341419543736333!GO:0006733;oxidoreduction coenzyme metabolic process;0.0345663337611699!GO:0006406;mRNA export from nucleus;0.0348234214835915!GO:0016601;Rac protein signal transduction;0.0350462488728723!GO:0040029;regulation of gene expression, epigenetic;0.0350462488728723!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.035297055579162!GO:0006082;organic acid metabolic process;0.035499746325387!GO:0051287;NAD binding;0.0363966550248852!GO:0005784;translocon complex;0.0366630755869264!GO:0008180;signalosome;0.0367754802669135!GO:0000118;histone deacetylase complex;0.0375344597714529!GO:0051056;regulation of small GTPase mediated signal transduction;0.0377366765620841!GO:0045767;regulation of anti-apoptosis;0.0382129640302748!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.038246499858276!GO:0006739;NADP metabolic process;0.0383012978850331!GO:0009112;nucleobase metabolic process;0.0385237700195214!GO:0033367;protein localization in mast cell secretory granule;0.0386282356985123!GO:0033365;protein localization in organelle;0.0386282356985123!GO:0033371;T cell secretory granule organization and biogenesis;0.0386282356985123!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0386282356985123!GO:0033375;protease localization in T cell secretory granule;0.0386282356985123!GO:0042629;mast cell granule;0.0386282356985123!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0386282356985123!GO:0033364;mast cell secretory granule organization and biogenesis;0.0386282356985123!GO:0033380;granzyme B localization in T cell secretory granule;0.0386282356985123!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0386282356985123!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0386282356985123!GO:0033368;protease localization in mast cell secretory granule;0.0386282356985123!GO:0033366;protein localization in secretory granule;0.0386282356985123!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0386282356985123!GO:0033374;protein localization in T cell secretory granule;0.0386282356985123!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0386499126643407!GO:0010257;NADH dehydrogenase complex assembly;0.0386499126643407!GO:0033108;mitochondrial respiratory chain complex assembly;0.0386499126643407!GO:0015923;mannosidase activity;0.0390137185689103!GO:0031529;ruffle organization and biogenesis;0.0391554058678724!GO:0006378;mRNA polyadenylation;0.0395843537037233!GO:0051348;negative regulation of transferase activity;0.0396173260530805!GO:0008538;proteasome activator activity;0.0398211380134688!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0402007537664218!GO:0000781;chromosome, telomeric region;0.0402294557754705!GO:0032313;regulation of Rab GTPase activity;0.0406731298821804!GO:0032483;regulation of Rab protein signal transduction;0.0406731298821804!GO:0032482;Rab protein signal transduction;0.0406731298821804!GO:0019843;rRNA binding;0.0411393993091364!GO:0008408;3'-5' exonuclease activity;0.0430485202773005!GO:0042824;MHC class I peptide loading complex;0.0430905090997222!GO:0008601;protein phosphatase type 2A regulator activity;0.0430905090997222!GO:0042770;DNA damage response, signal transduction;0.0439428836997744!GO:0004721;phosphoprotein phosphatase activity;0.0452024563896087!GO:0000792;heterochromatin;0.0459226667779831!GO:0006506;GPI anchor biosynthetic process;0.0468869113964693!GO:0005905;coated pit;0.0472693482748698!GO:0046979;TAP2 binding;0.0472742470121758!GO:0046977;TAP binding;0.0472742470121758!GO:0046978;TAP1 binding;0.0472742470121758!GO:0000152;nuclear ubiquitin ligase complex;0.0474535266413364!GO:0045815;positive regulation of gene expression, epigenetic;0.0476075754348136!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0476075754348136!GO:0030911;TPR domain binding;0.0478818589466134!GO:0000776;kinetochore;0.048170411447624!GO:0051235;maintenance of localization;0.0482047898733575!GO:0008097;5S rRNA binding;0.0482632657466584!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0495624894487868!GO:0017134;fibroblast growth factor binding;0.0495624894487868!GO:0006595;polyamine metabolic process;0.0495980661482721!GO:0043241;protein complex disassembly;0.049760964288244
|sample_id=11903
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=FOX{F1,F2,J1}:1.91657510577;NFKB1_REL_RELA:1.42446032232;HSF1,2:1.38955999835;TLX2:1.34596255299;STAT1,3:1.155895852;PAX6:1.0990246427;SREBF1,2:1.02175520244;FOXN1:0.989940937341;IRF1,2:0.949954312726;NKX6-1,2:0.846754221928;NFIX:0.84166429436;FOXA2:0.748619632296;PRRX1,2:0.735496758168;ATF5_CREB3:0.702537974536;EVI1:0.669863795346;FOXQ1:0.667216998405;RORA:0.615501979383;STAT5{A,B}:0.591427165471;CDX1,2,4:0.568433365502;HOX{A6,A7,B6,B7}:0.564823941778;SPI1:0.556717700982;RUNX1..3:0.556110185437;ESRRA:0.520531149927;RFX2..5_RFXANK_RFXAP:0.512730068261;FOXP3:0.491407475324;OCT4_SOX2{dimer}:0.488684320193;SPZ1:0.488224739777;BPTF:0.471547760711;ELF1,2,4:0.441951707508;ZBTB16:0.426630995777;NANOG{mouse}:0.411880442005;NKX2-2,8:0.411450480796;ATF2:0.401677898102;NANOG:0.392210918177;SPIB:0.337796629289;LMO2:0.327148965366;AHR_ARNT_ARNT2:0.323044936063;PDX1:0.322962797159;POU1F1:0.320323128874;JUN:0.293871161345;ELK1,4_GABP{A,B1}:0.267354374068;RXRA_VDR{dimer}:0.2599701772;ALX1:0.254736592866;SOX2:0.228404107775;CUX2:0.227157910674;GLI1..3:0.212865684712;NKX2-3_NKX2-5:0.197479461744;FOX{D1,D2}:0.194165261208;FOSL2:0.180471112316;HMX1:0.17813498283;ESR1:0.17637810714;IKZF2:0.175938550639;YY1:0.162438581394;CRX:0.160370164963;DMAP1_NCOR{1,2}_SMARC:0.155548134391;ZEB1:0.149253848145;HOXA9_MEIS1:0.144189371598;NR5A1,2:0.143880699634;ZNF148:0.127052923521;ETS1,2:0.125233479474;HNF4A_NR2F1,2:0.117731175164;POU2F1..3:0.100097793259;IRF7:0.0939260644198;TGIF1:0.0786446556309;NFE2:0.0630468094117;ALX4:0.0586980634334;HMGA1,2:0.0438258017739;SNAI1..3:0.03059560824;PBX1:0.0280262260442;PAX2:0.0179911627642;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0124136253724;NFE2L1:0.00799688582549;MYB:0.00189934981788;CREB1:-0.000752245879971;ARID5B:-0.0233314266428;ZFP161:-0.051705835757;ATF4:-0.0634893217625;BACH2:-0.0731941704699;TAL1_TCF{3,4,12}:-0.0771017157299;NFE2L2:-0.0783714278928;TFCP2:-0.0858139845313;LHX3,4:-0.0973243992469;NKX3-1:-0.0998743855918;SRF:-0.135707427866;FOXM1:-0.165248845639;NRF1:-0.167319621459;HNF1A:-0.1674142706;PAX8:-0.190950629171;MYFfamily:-0.195734867611;GATA6:-0.19941451988;HAND1,2:-0.21801589118;EP300:-0.253748801872;NFY{A,B,C}:-0.258128066459;FOXP1:-0.260881828199;STAT2,4,6:-0.264007885081;SP1:-0.274045331186;NFIL3:-0.280951376048;ZNF143:-0.292862979455;MYOD1:-0.309852504636;TP53:-0.316960744333;ONECUT1,2:-0.319247686648;SOX5:-0.328354309669;MTF1:-0.336015702236;FOS_FOS{B,L1}_JUN{B,D}:-0.337778473427;SOX17:-0.342338777554;ATF6:-0.361000778029;MEF2{A,B,C,D}:-0.390935927662;HES1:-0.418599387752;PAX4:-0.445177451958;ZNF238:-0.44579109613;POU3F1..4:-0.45175695895;HOX{A4,D4}:-0.465876213907;AIRE:-0.467063577691;GFI1B:-0.46881508662;XBP1:-0.469253399157;MAZ:-0.476640408426;BREu{core}:-0.491222434287;MYBL2:-0.497045372061;TFAP2{A,C}:-0.516281469989;SMAD1..7,9:-0.535854032859;E2F1..5:-0.540135364332;LEF1_TCF7_TCF7L1,2:-0.540424996284;NFATC1..3:-0.545229737597;TOPORS:-0.550148625828;RFX1:-0.551072265405;NR6A1:-0.556869447367;NHLH1,2:-0.570569225892;VSX1,2:-0.573890171659;TBX4,5:-0.596291618006;POU5F1:-0.597678105186;FOXO1,3,4:-0.60900008162;TBP:-0.611744558458;HLF:-0.613633171816;MAFB:-0.634328817859;MED-1{core}:-0.636257991123;HBP1_HMGB_SSRP1_UBTF:-0.636463399431;GZF1:-0.638654868873;MTE{core}:-0.646599531841;HOX{A5,B5}:-0.651573846841;NR1H4:-0.657847206642;TFAP4:-0.677038397978;TLX1..3_NFIC{dimer}:-0.679403183523;AR:-0.682183792269;FOX{I1,J2}:-0.719927534776;PITX1..3:-0.722913631883;PAX5:-0.728283970321;CEBPA,B_DDIT3:-0.728385568084;EN1,2:-0.729551841268;XCPE1{core}:-0.786639708548;SOX{8,9,10}:-0.797186045995;CDC5L:-0.802239583426;NKX3-2:-0.80288489336;NKX2-1,4:-0.818249568172;PPARG:-0.824343351952;RBPJ:-0.873018532029;UFEwm:-0.879327752225;ZIC1..3:-0.8989321394;EBF1:-0.911631323069;IKZF1:-0.950680332504;TEAD1:-0.965721661108;TFDP1:-0.978453588553;GFI1:-0.989558266378;HIF1A:-0.992542155753;EGR1..3:-0.993077477023;MZF1:-0.99625219558;KLF4:-1.00031235838;ZBTB6:-1.00550073254;PAX3,7:-1.00582234046;HIC1:-1.01542580668;ZNF423:-1.01834592364;REST:-1.02027450059;GATA4:-1.06436269861;GTF2A1,2:-1.0788607899;PRDM1:-1.08046567421;PATZ1:-1.08877395712;RREB1:-1.11565278651;TFAP2B:-1.1708278462;GTF2I:-1.17173991605;ZNF384:-1.17830922073;NR3C1:-1.19963264749;TEF:-1.27802732197;ADNP_IRX_SIX_ZHX:-1.28018530764;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.30069758978;POU6F1:-1.34768516057;bHLH_family:-1.44901061743;PAX1,9:-1.47951745745;GCM1,2:-1.55842376228;RXR{A,B,G}:-1.66638308472;FOXD3:-1.66938338515;FOXL1:-1.82278870491;DBP:-2.28991727149;T:-2.31719032177
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11903-125F4;search_select_hide=table117:FF:11903-125F4
}}
}}

Latest revision as of 18:28, 4 June 2020

Name:migratory langerhans cells, donor3
Species:Human (Homo sapiens)
Library ID:CNhs13547
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexNA
ageNA
cell typelangerhans cell
cell lineNA
companyNA
collaborationTeunis Geijtenbeek
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberLC-C
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004873
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13547 CAGE DRX008570 DRR009442
Accession ID Hg19

Library idBAMCTSS
CNhs13547 DRZ000867 DRZ002252
Accession ID Hg38

Library idBAMCTSS
CNhs13547 DRZ012217 DRZ013602
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.00181
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.27
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0272
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.00434
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.0592
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0217
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.196
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0729
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage1.047
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.139
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.172
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.35
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.231
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.663
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0202
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0658
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.522
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0281
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.046
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.416
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0658
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.144
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0.982
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0.0658
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13547

Jaspar motifP-value
MA0002.20.00143
MA0003.10.782
MA0004.10.356
MA0006.10.937
MA0007.10.784
MA0009.10.167
MA0014.10.122
MA0017.10.00136
MA0018.20.433
MA0019.10.738
MA0024.10.0614
MA0025.10.165
MA0027.10.997
MA0028.10.0441
MA0029.10.718
MA0030.10.613
MA0031.10.86
MA0035.20.643
MA0038.10.19
MA0039.20.0247
MA0040.10.395
MA0041.10.27
MA0042.10.531
MA0043.10.341
MA0046.10.748
MA0047.20.403
MA0048.10.603
MA0050.11.15165e-4
MA0051.10.00798
MA0052.10.11
MA0055.10.462
MA0057.10.75
MA0058.10.442
MA0059.10.702
MA0060.10.117
MA0061.13.00359e-15
MA0062.21.59777e-5
MA0065.20.00387
MA0066.10.964
MA0067.10.011
MA0068.10.0549
MA0069.10.831
MA0070.10.351
MA0071.10.0571
MA0072.10.378
MA0073.10.86
MA0074.10.476
MA0076.10.0935
MA0077.10.653
MA0078.10.929
MA0079.20.997
MA0080.22.95731e-9
MA0081.10.0264
MA0083.10.0628
MA0084.10.166
MA0087.10.254
MA0088.10.0849
MA0090.10.00702
MA0091.10.832
MA0092.10.941
MA0093.10.329
MA0099.20.598
MA0100.10.845
MA0101.16.31389e-13
MA0102.20.69
MA0103.10.0775
MA0104.20.549
MA0105.18.14384e-15
MA0106.10.875
MA0107.13.80737e-17
MA0108.25.45043e-6
MA0111.10.132
MA0112.20.00292
MA0113.10.634
MA0114.10.00546
MA0115.10.118
MA0116.17.63143e-4
MA0117.10.6
MA0119.10.732
MA0122.10.322
MA0124.10.724
MA0125.10.807
MA0131.10.502
MA0135.10.38
MA0136.12.29479e-6
MA0137.20.205
MA0138.20.242
MA0139.10.212
MA0140.10.7
MA0141.10.00596
MA0142.10.648
MA0143.10.488
MA0144.10.806
MA0145.10.176
MA0146.10.189
MA0147.10.61
MA0148.10.492
MA0149.10.17
MA0150.10.00984
MA0152.10.0775
MA0153.10.0239
MA0154.12.62371e-4
MA0155.10.19
MA0156.10.00742
MA0157.10.44
MA0159.10.0247
MA0160.10.00114
MA0162.10.567
MA0163.13.88453e-4
MA0164.10.619
MA0258.10.0213
MA0259.10.786



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13547

Novel motifP-value
10.0583
100.0366
1000.841
1010.174
1020.375
1030.0198
1040.329
1050.121
1060.0703
1070.563
1080.843
1090.0425
110.271
1100.366
1110.0419
1120.0228
1130.877
1140.00674
1150.0255
1160.77
1170.0184
1180.16
1190.0272
120.662
1200.694
1210.825
1220.789
1230.79
1240.172
1250.94
1260.0252
1270.15
1280.0238
1290.237
130.0384
1300.74
1310.865
1320.497
1330.975
1340.831
1350.422
1360.336
1370.0359
1380.744
1390.115
140.318
1400.0238
1410.889
1420.339
1430.332
1440.718
1450.587
1460.728
1470.208
1480.0609
1490.457
150.0581
1500.501
1510.463
1520.643
1530.841
1540.62
1550.023
1560.591
1570.399
1580.152
1590.709
160.309
1600.839
1610.13
1620.302
1630.635
1640.379
1650.128
1660.957
1670.686
1680.532
1690.145
170.782
180.669
190.856
20.957
200.178
210.266
220.686
230.341
240.864
250.225
260.449
270.765
280.335
290.0662
30.0806
300.671
310.707
320.312
330.186
340.864
350.378
360.057
370.0931
380.279
390.989
40.357
400.0584
410.268
420.188
430.111
440.0241
450.886
460.18
470.178
480.251
490.0708
50.478
500.984
510.328
520.137
530.484
540.393
550.651
560.754
570.245
580.0528
590.368
60.984
600.0555
610.264
620.029
630.49
640.341
650.322
660.443
670.224
680.586
690.374
70.0864
700.0885
710.147
720.179
730.546
740.692
750.111
760.278
770.964
780.088
790.809
80.709
800.806
810.517
820.275
830.419
840.174
850.401
860.44
870.128
880.232
890.41
90.651
900.00795
910.821
920.554
930.482
940.0416
950.0226
960.0322
970.902
980.0919
990.772



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13547


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011136 (human migratory langerhans cells sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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