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{{f5samples
{{f5samples
|id=FF:10023-101D5
|DRA_sample_Accession=CAGE@SAMD00005588
|name=skeletal muscle, adult, pool1
|accession_numbers=CAGE;DRX008720;DRR009592;DRZ001017;DRZ002402;DRZ012367;DRZ013752
|sample_id=10023
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001134,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002036,UBERON:0002385,UBERON:0010317,UBERON:0001015,UBERON:0002204,UBERON:0000383
|rna_tube_id=101D5
|rna_box=101
|rna_position=D5
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Ambion
|rna_lot_number=0910061 -14
|rna_catalog_number=Cat:AM6000 Lot:0910061 -14
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=55,79,79 years old adult
|sample_tissue=skeletal muscle
|sample_donor(cell lot)=3 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs10629,LSID657,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0002036,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003082,UBERON:0003104,UBERON:0004120,UBERON:0004290,UBERON:0005291,UBERON:0005423,UBERON:0007023,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010023
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:81101404..81101421,+!p1@MYF6!2.76!577.17!MYF6;;chr12:10875658..10875708,-!p2@CSDA!2.59!856.21!CSDA;;chr12:52437488..52437507,+!p2@NR4A1!2.44!276.47!NR4A1;;chr15:42749722..42749739,-!p2@ZFP106!2.43!470.81!ZFP106;;chr1:151804244..151804310,-!p1@RORC!2.13!135.00!RORC;;chr1:203055129..203055147,-!p1@MYOG!1.94!86.24!MYOG;;chr12:10875831..10876025,-!p1@CSDA!1.88!5761.44!CSDA;;chr12:10870927..10870966,-!p5@CSDA!1.86!71.56!CSDA;;chr12:81101472..81101483,+!p2@MYF6!1.85!69.71!MYF6;;chr20:62680984..62680999,-!p1@SOX18!1.76!73.20!SOX18;;chr3:141150883..141150961,+!p6@ZBTB38!1.76!56.16!ZBTB38;;chr3:189349162..189349207,+!p2@TP63!1.72!51.23!TP63;;chr11:113930425..113930471,+!p1@ZBTB16!1.65!61.60!ZBTB16;;chr22:19748231..19748317,+!p1@TBX1!1.65!44.04!TBX1;;chr3:141151009..141151033,+!p10@ZBTB38!1.63!41.99!ZBTB38;;chr12:54378923..54378966,+!p1@HOXC10!1.54!33.37!HOXC10;;chr1:170633348..170633399,+!p2@PRRX1!1.52!43.22!PRRX1;;chr21:39870339..39870443,-!p1@ERG!1.52!32.34!ERG;;chr12:10875768..10875808,-!p3@CSDA!1.51!47.22!CSDA;;chr3:126076242..126076257,-!p1@KLF15!1.51!38.40!KLF15;;chr17:38256799..38256815,-!p3@NR1D1!1.50!54.41!NR1D1;;chr3:69788576..69788648,+!p1@MITF!1.49!153.79!MITF;;chr12:10870989..10871013,-!p11@CSDA!1.49!29.77!CSDA;;chr8:55370487..55370503,+!p1@SOX17!1.49!29.57!SOX17;;chr14:61116183..61116208,-!p1@SIX1!1.46!102.35!SIX1;;chr17:38256822..38256851,-!p1@NR1D1!1.45!207.07!NR1D1;;chr1:170632285..170632309,+!p1@PRRX1!1.45!30.49!PRRX1;;chr1:119530493..119530572,-!p1@TBX15!1.44!26.49!TBX15;;chr3:189348969..189349018,+!p4@TP63!1.44!26.49!TP63;;chr15:60884706..60884743,-!p1@RORA!1.42!127.51!RORA;;chr12:26277817..26277863,-!p2@BHLHE41!1.42!33.78!BHLHE41;;chr7:73038839..73038862,-!p1@MLXIPL!1.41!24.43!MLXIPL;;chr1:170633262..170633285,+!p3@PRRX1!1.40!27.82!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!1.40!24.23!SOX7;;chr13:41240717..41240735,-!p2@FOXO1!1.39!154.61!FOXO1;;chr12:81101442..81101449,+!p3@MYF6!1.38!23.00!MYF6;;chr6:126070769..126070801,+!p1@HEY2!1.35!24.33!HEY2;;chr12:10871020..10871032,-!p26@CSDA!1.34!20.74!CSDA;;chr11:125034640..125034655,+!p1@PKNOX2!1.33!20.33!PKNOX2;;chr9:102584159..102584174,+!p2@NR4A3!1.32!35.42!NR4A3;;chr12:26277956..26277980,-!p1@BHLHE41!1.30!66.63!BHLHE41;;chr12:3069037..3069119,+!p2@TEAD4!1.29!62.21!TEAD4;;chr7:27205136..27205164,-!p1@HOXA9!1.29!18.48!HOXA9;;chr12:54393880..54393962,+!p1@HOXC9!1.27!17.66!HOXC9;;chr5:134369879..134369898,-!p2@PITX1!1.26!17.14!PITX1;;chr13:41240737..41240787,-!p1@FOXO1!1.24!189.52!FOXO1;;chr11:113930291..113930339,+!p2@ZBTB16!1.24!26.90!ZBTB16;;chr1:170633058..170633084,+!p5@PRRX1!1.24!16.22!PRRX1;;chr8:48650715..48650735,-!p1@CEBPD!1.23!1963.73!CEBPD;;chr1:170632959..170632987,+!p4@PRRX1!1.23!17.35!PRRX1;;chr11:17741111..17741124,+!p1@MYOD1!1.23!15.91!MYOD1;;chr10:63809106..63809127,+!p1@ARID5B!1.22!207.07!ARID5B;;chr3:187463179..187463201,-!p2@BCL6!1.20!61.19!BCL6;;chr1:214161272..214161322,+!p1@PROX1!1.20!20.74!PROX1;;chr7:15726296..15726315,-!p1@MEOX2!1.20!14.99!MEOX2;;chr17:80797886..80797906,-!p1@ZNF750!1.20!14.89!ZNF750;;chr1:40105299..40105326,-!p1@HEYL!1.19!14.37!HEYL;;chr12:81110684..81110700,+!p1@MYF5!1.18!14.06!MYF5;;chr9:73028814..73028895,-!p1@KLF9!1.17!135.72!KLF9;;chr4:87928413..87928433,+!p3@AFF1!1.17!85.21!AFF1;;chr12:10865870..10865888,-!p6@CSDA!1.16!18.48!CSDA;;chr8:25902876..25902936,-!p1@EBF2!1.16!13.55!EBF2;;chr1:165414325..165414369,-!p1@RXRG!1.16!13.45!RXRG;;chr12:10875612..10875631,-!p9@CSDA!1.15!15.71!CSDA;;chr7:15726243..15726293,-!p2@MEOX2!1.15!13.24!MEOX2;;chr7:27196267..27196311,-!p1@HOXA7!1.15!13.14!HOXA7;;chr11:16627528..16627550,-!p7@SOX6!1.14!12.94!SOX6;;chr19:46801639..46801699,+!p1@HIF3A!1.14!12.94!HIF3A;;chr16:79634624..79634642,-!p1@MAF!1.12!48.46!MAF;;chr16:79633894..79633954,-!p3@MAF!1.12!23.72!MAF;;chr9:14313641..14313652,-!p13@NFIB!1.12!12.32!NFIB;;chr2:242556880..242556899,-!p5@THAP4!1.12!12.22!THAP4;;chr17:41739283..41739297,-!p1@MEOX1!1.12!12.11!MEOX1;;chr5:71803177..71803255,-!p1@ZNF366!1.11!11.81!ZNF366;;chr10:63809013..63809041,+!p3@ARID5B!1.10!64.88!ARID5B;;chr14:73360799..73360817,-!p1@DPF3!1.10!40.45!DPF3;;chr10:63809077..63809089,+!p5@ARID5B!1.10!25.36!ARID5B;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.60!ZBTB16;;chr5:134369905..134369972,-!p1@PITX1!1.09!17.45!PITX1;;chr12:3068957..3068978,+!p6@TEAD4!1.09!12.83!TEAD4;;chr1:10856639..10856662,-!p2@CASZ1!1.09!11.40!CASZ1;;chr6:108977520..108977534,+!p7@FOXO3!1.09!11.29!FOXO3;;chr7:150945754..150945789,-!p2@SMARCD3!1.08!33.88!SMARCD3;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.05!ZFPM2;;chr2:85981222..85981259,+!p2@ATOH8!1.08!18.48!ATOH8;;chr12:10871049..10871064,-!p19@CSDA!1.08!10.98!CSDA;;chr12:52445218..52445237,+!p1@NR4A1!1.07!137.36!NR4A1;;chr3:52001396..52001425,-!p4@PCBP4!1.07!19.10!PCBP4;;chr12:10871068..10871079,-!p25@CSDA!1.07!10.78!CSDA;;chr18:53068911..53068935,-!p4@TCF4!1.06!11.81!TCF4;;chr17:46126136..46126152,+!p1@NFE2L1!1.05!531.90!NFE2L1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.05!10.16!HOXC5;;chr7:150946015..150946070,-!p3@SMARCD3!1.04!21.97!SMARCD3;;chr7:150945865..150945896,-!p4@SMARCD3!1.04!9.96!SMARCD3;;chr12:10854595..10854628,-!p7@CSDA!1.02!13.24!CSDA;;chrX:106960285..106960299,-!p1@TSC22D3!1.01!251.83!TSC22D3;;chr12:26277929..26277955,-!p3@BHLHE41!1.01!13.24!BHLHE41;;chrX:70315688..70315709,+!p1@FOXO4!1.00!21.46!FOXO4;;chr18:53089453..53089482,-!p11@TCF4!1.00!9.03!TCF4;;chr12:10876282..10876288,-!p29@CSDA!1.00!8.93!CSDA;;chr4:87856191..87856208,+!p2@AFF1!0.99!70.84!AFF1;;chr2:119605214..119605230,-!p1@EN1!0.99!8.73!EN1;;chr1:8483878..8483907,-!p4@RERE!0.98!33.78!RERE;;chr3:52001426..52001447,-!p3@PCBP4!0.98!24.64!PCBP4;;chr7:113726357..113726443,+!p1@FOXP2!0.98!15.09!FOXP2;;chr9:94186085..94186096,-!p3@NFIL3!0.98!14.17!NFIL3;;chr3:126076264..126076305,-!p2@KLF15!0.98!12.22!KLF15;;chr11:16629261..16629284,-!p1@SOX6!0.98!8.52!SOX6;;chr19:16435625..16435682,+!p1@KLF2!0.97!273.90!KLF2;;chr3:114343768..114343822,-!p1@ZBTB20!0.97!37.68!ZBTB20;;chr12:10856713..10856723,-!p23@CSDA!0.97!8.32!CSDA;;chr13:37494365..37494381,-!p1@SMAD9!0.96!14.27!SMAD9;;chr17:53342311..53342400,+!p1@HLF!0.96!9.34!HLF;;chr11:47400078..47400106,-!p1@SPI1!0.96!8.21!SPI1;;chr12:10875481..10875504,-!p14@CSDA!0.96!8.21!CSDA;;chr1:8483756..8483809,-!p5@RERE!0.95!22.48!RERE;;chrX:24167548..24167617,+!p2@ZFX!0.94!24.33!ZFX;;chr8:80679993..80680011,-!p1@HEY1!0.94!11.50!HEY1;;chrX:107018969..107019024,-!p6@TSC22D3!0.94!10.88!TSC22D3;;chr13:27998854..27998866,+!p3@GTF3A!0.93!15.40!GTF3A;;chr12:3068979..3068993,+!p11@TEAD4!0.93!7.60!TEAD4;;chr1:216896752..216896778,-!p1@ESRRG!0.93!7.60!ESRRG;;chr12:10875548..10875563,-!p13@CSDA!0.93!7.49!CSDA;;chr8:144512897..144512903,-!p1@MAFA!0.93!7.49!MAFA;;chr9:73028786..73028797,-!p11@KLF9!0.93!7.49!KLF9;;chr4:111543899..111543923,-!p6@PITX2!0.93!7.49!PITX2;;chr17:6926362..6926377,+!p1@BCL6B!0.92!7.39!BCL6B;;chrX:25034067..25034088,-!p1@ARX!0.92!7.39!ARX;;chr11:12766597..12766618,+!p11@TEAD1!0.92!7.29!TEAD1;;chr20:48807351..48807384,+!p1@CEBPB!0.91!763.30!CEBPB;;chr19:3366570..3366619,+!p1@NFIC!0.91!237.97!NFIC;;chr22:38597987..38598021,+!p2@MAFF!0.91!45.17!MAFF;;chr10:63808979..63808990,+!p8@ARID5B!0.91!7.80!ARID5B;;chr13:41240387..41240405,-!p3@FOXO1!0.91!7.19!FOXO1;;chr9:94186101..94186122,-!p1@NFIL3!0.90!102.46!NFIL3;;chr1:156470515..156470542,-!p2@MEF2D!0.90!38.29!MEF2D;;chr1:216978721..216978728,-!p13@ESRRG!0.90!6.98!ESRRG;;chr12:81101462..81101467,+!p4@MYF6!0.90!6.98!MYF6;;chr2:176994408..176994492,+!p1@HOXD8!0.90!6.88!HOXD8;;chr22:38598086..38598105,+!p1@MAFF!0.89!76.28!MAFF;;chrX:106960180..106960197,-!p2@TSC22D3!0.89!26.90!TSC22D3;;chr11:12696002..12696022,+!p2@TEAD1!0.89!17.25!TEAD1;;chr9:102584262..102584276,+!p1@NR4A3!0.89!15.81!NR4A3;;chr12:10875823..10875827,-!p22@CSDA!0.89!6.78!CSDA;;chr12:54379029..54379057,+!p2@HOXC10!0.89!6.78!HOXC10;;chr1:156470556..156470643,-!p1@MEF2D!0.88!280.58!MEF2D;;chr12:81101753..81101762,+!p5@MYF6!0.88!6.67!MYF6;;chr10:131762504..131762555,-!p1@EBF3!0.88!6.57!EBF3;;chr12:10856697..10856712,-!p12@CSDA!0.88!6.57!CSDA;;chr19:13106214..13106382,+!p1@NFIX!0.87!158.92!NFIX;;chr9:137218341..137218361,+!p2@RXRA!0.87!27.62!RXRA;;chr18:77155922..77155939,+!p1@NFATC1!0.87!18.58!NFATC1;;chr2:19558373..19558392,-!p1@OSR1!0.87!18.58!OSR1;;chrX:107019163..107019179,-!p7@TSC22D3!0.87!7.49!TSC22D3;;chr4:149363494..149363543,-!p1@NR3C2!0.87!6.47!NR3C2;;chr1:61548225..61548299,+!p1@NFIA!0.86!86.03!NFIA;;chr3:18466787..18466839,-!p1@SATB1!0.86!29.26!SATB1;;chr19:3359257..3359362,+!p3@NFIC!0.86!19.81!NFIC;;chr1:8483849..8483868,-!p14@RERE!0.86!10.47!RERE;;chr20:50159198..50159299,-!p1@NFATC2!0.86!9.44!NFATC2;;chr17:38256877..38256900,-!p2@NR1D1!0.85!20.43!NR1D1;;chr1:8484314..8484348,-!p7@RERE!0.85!17.14!RERE;;chr10:63809134..63809145,+!p6@ARID5B!0.85!14.68!ARID5B;;chr16:79634595..79634620,-!p2@MAF!0.85!11.50!MAF;;chr1:8483723..8483752,-!p12@RERE!0.85!9.75!RERE;;chr6:91006575..91006602,-!p2@BACH2!0.85!9.24!BACH2;;chr12:10865922..10865934,-!p15@CSDA!0.85!6.16!CSDA;;chr11:16627614..16627651,-!p4@SOX6!0.85!6.06!SOX6;;chr17:38256590..38256599,-!p8@NR1D1!0.85!6.06!NR1D1;;chr1:10856694..10856715,-!p3@CASZ1!0.85!6.06!CASZ1;;chr1:165414227..165414242,-!p2@RXRG!0.85!6.06!RXRG;;chr21:40177845..40177863,+!p1@ETS2!0.84!375.23!ETS2;;chr6:41703296..41703367,-!p1@TFEB!0.84!31.93!TFEB;;chr9:73029219..73029289,-!p2@KLF9!0.84!19.10!KLF9;;chr3:5021191..5021202,+!p3@BHLHE40!0.84!16.84!BHLHE40;;chr13:72441315..72441454,-!p1@DACH1!0.84!12.42!DACH1;;chr11:113930355..113930366,+!p5@ZBTB16!0.84!5.95!ZBTB16;;chr2:24714729..24714761,+!p1@NCOA1!0.84!5.95!NCOA1;;chr2:68592406..68592424,+!p1@PLEK!0.84!5.95!PLEK;;chr7:27196217..27196246,-!p2@HOXA7!0.84!5.95!HOXA7;;chr1:165414259..165414273,-!p6@RXRG!0.84!5.95!RXRG;;chr7:27169801..27169844,-!p2@HOXA4!0.84!5.85!HOXA4;;chr2:45236540..45236577,-!p1@SIX2!0.83!5.75!SIX2;;chr1:119530636..119530653,-!p2@TBX15!0.83!5.75!TBX15;;chr2:97202480..97202499,+!p1@ARID5A!0.82!61.70!ARID5A;;chr13:45151259..45151326,-!p2@TSC22D1!0.82!35.83!TSC22D1;;chr4: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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0003104,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg38.nobarcode.ctss.bed.gz
|id=FF:10023-101D5
|is_a=EFO:0002091;;FF:0010023
|is_obsolete=
|library_id=CNhs10629
|library_id_phase_based=2:CNhs10629
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10023
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10023
|name=skeletal muscle, adult, pool1
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs10629,LSID657,release008,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=101
|rna_catalog_number=Cat:AM6000 Lot:0910061 -14
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0
|rna_lot_number=0910061 -14
|rna_od260/230=
|rna_od260/280=
|rna_position=D5
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=101D5
|rna_weight_ug=10
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Ambion
|sample_description=
|sample_dev_stage=55,79,79 years old adult
|sample_disease=normal
|sample_donor(cell lot)=3 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80666161626941e-217!GO:0005737;cytoplasm;3.07992816759316e-192!GO:0043226;organelle;1.75766259816179e-163!GO:0043229;intracellular organelle;4.90274194258115e-163!GO:0043227;membrane-bound organelle;2.53537214804327e-151!GO:0043231;intracellular membrane-bound organelle;2.53537214804327e-151!GO:0044444;cytoplasmic part;1.67291782590076e-139!GO:0005515;protein binding;9.78037644546268e-101!GO:0044422;organelle part;2.72255043530024e-98!GO:0044446;intracellular organelle part;2.61130144936476e-97!GO:0032991;macromolecular complex;7.42051232198498e-92!GO:0005739;mitochondrion;4.00506666966911e-78!GO:0044238;primary metabolic process;1.06263286634129e-71!GO:0044237;cellular metabolic process;1.56216818849978e-71!GO:0030529;ribonucleoprotein complex;4.661687130954e-69!GO:0043170;macromolecule metabolic process;2.52300358337283e-66!GO:0043233;organelle lumen;1.46839508112381e-63!GO:0031974;membrane-enclosed lumen;1.46839508112381e-63!GO:0003723;RNA binding;9.93421058997059e-58!GO:0005634;nucleus;1.33916733997069e-55!GO:0044429;mitochondrial part;5.5159069286894e-55!GO:0044428;nuclear part;3.09670376518925e-54!GO:0043234;protein complex;2.83552953589101e-49!GO:0019538;protein metabolic process;2.34152231876658e-48!GO:0031967;organelle envelope;5.59436177347752e-45!GO:0031975;envelope;1.02320062733153e-44!GO:0006412;translation;2.15351589887697e-44!GO:0005840;ribosome;2.69654706526664e-44!GO:0044260;cellular macromolecule metabolic process;9.5947387595876e-43!GO:0044267;cellular protein metabolic process;2.16537034936922e-40!GO:0016043;cellular component organization and biogenesis;4.56074038176221e-39!GO:0031090;organelle membrane;7.88487006853861e-39!GO:0003735;structural constituent of ribosome;1.10103108792829e-37!GO:0010467;gene expression;7.46039671233006e-37!GO:0005740;mitochondrial envelope;1.8429342616683e-36!GO:0031966;mitochondrial membrane;1.02631821872294e-35!GO:0043283;biopolymer metabolic process;5.94304630592524e-35!GO:0031981;nuclear lumen;1.41090706906221e-34!GO:0006396;RNA processing;1.51372629404093e-34!GO:0044249;cellular biosynthetic process;5.12622913216483e-34!GO:0033036;macromolecule localization;1.36477587213326e-33!GO:0005829;cytosol;2.03627622290881e-33!GO:0019866;organelle inner membrane;2.41980689337292e-32!GO:0015031;protein transport;5.89744276191727e-32!GO:0033279;ribosomal subunit;6.8726083321901e-32!GO:0005743;mitochondrial inner membrane;2.46382111283196e-31!GO:0009059;macromolecule biosynthetic process;3.58434909107843e-31!GO:0016071;mRNA metabolic process;5.6397134725817e-31!GO:0008380;RNA splicing;7.04810989878891e-31!GO:0008104;protein localization;7.6846262043289e-31!GO:0045184;establishment of protein localization;1.84514931145991e-30!GO:0009058;biosynthetic process;2.82399636865465e-30!GO:0046907;intracellular transport;1.74488309501044e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.17366288913051e-26!GO:0006397;mRNA processing;6.83795357858355e-26!GO:0065003;macromolecular complex assembly;7.22847450559922e-25!GO:0022607;cellular component assembly;1.5464934100078e-24!GO:0006886;intracellular protein transport;2.74636719764965e-24!GO:0043228;non-membrane-bound organelle;5.69403720161194e-24!GO:0043232;intracellular non-membrane-bound organelle;5.69403720161194e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.37481783338042e-23!GO:0006512;ubiquitin cycle;3.60640673548789e-23!GO:0031980;mitochondrial lumen;4.03342815195917e-23!GO:0005759;mitochondrial matrix;4.03342815195917e-23!GO:0044455;mitochondrial membrane part;7.89662603139504e-23!GO:0006119;oxidative phosphorylation;7.99282064174644e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.91202060803039e-21!GO:0005654;nucleoplasm;3.75906295303486e-21!GO:0005746;mitochondrial respiratory chain;1.19217440373563e-20!GO:0008134;transcription factor binding;2.85288100229433e-20!GO:0005681;spliceosome;3.21569590967362e-20!GO:0044451;nucleoplasm part;1.11586827433163e-19!GO:0044445;cytosolic part;7.04068094478242e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;1.02772514719436e-18!GO:0006511;ubiquitin-dependent protein catabolic process;1.65570208124157e-18!GO:0019941;modification-dependent protein catabolic process;1.84911276449598e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.84911276449598e-18!GO:0044265;cellular macromolecule catabolic process;1.96508857422056e-18!GO:0008092;cytoskeletal protein binding;2.31438460702807e-18!GO:0044257;cellular protein catabolic process;5.27127635990278e-18!GO:0022618;protein-RNA complex assembly;5.61185005045757e-18!GO:0000166;nucleotide binding;6.16136329495326e-18!GO:0006996;organelle organization and biogenesis;8.95313377211331e-18!GO:0008135;translation factor activity, nucleic acid binding;1.06120789597224e-17!GO:0050136;NADH dehydrogenase (quinone) activity;2.91564125116184e-17!GO:0003954;NADH dehydrogenase activity;2.91564125116184e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.91564125116184e-17!GO:0044248;cellular catabolic process;4.09788871105936e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.71783863037217e-17!GO:0015935;small ribosomal subunit;8.21347570704762e-17!GO:0016874;ligase activity;2.30050485526633e-16!GO:0051641;cellular localization;2.73864291369332e-16!GO:0051649;establishment of cellular localization;2.99037522392555e-16!GO:0015934;large ribosomal subunit;3.4386026702528e-16!GO:0043285;biopolymer catabolic process;6.37697587644885e-16!GO:0016070;RNA metabolic process;1.06200302032841e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.10019662759506e-15!GO:0042773;ATP synthesis coupled electron transport;1.10019662759506e-15!GO:0003676;nucleic acid binding;1.92539622195826e-15!GO:0030964;NADH dehydrogenase complex (quinone);2.49945133239617e-15!GO:0045271;respiratory chain complex I;2.49945133239617e-15!GO:0005747;mitochondrial respiratory chain complex I;2.49945133239617e-15!GO:0043412;biopolymer modification;4.28398577315395e-15!GO:0043687;post-translational protein modification;6.66448299533355e-15!GO:0051186;cofactor metabolic process;7.41770591021764e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.00019678751121e-15!GO:0009057;macromolecule catabolic process;8.15604959473267e-15!GO:0006457;protein folding;8.21939201572475e-15!GO:0005761;mitochondrial ribosome;9.35012623994574e-15!GO:0000313;organellar ribosome;9.35012623994574e-15!GO:0044449;contractile fiber part;1.12957375537398e-14!GO:0015629;actin cytoskeleton;1.15835712397642e-14!GO:0043292;contractile fiber;1.25258489480771e-14!GO:0005730;nucleolus;1.47820312093018e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.95558826150636e-14!GO:0030163;protein catabolic process;2.49046424940487e-14!GO:0006605;protein targeting;2.54843609291638e-14!GO:0000502;proteasome complex (sensu Eukaryota);3.42610437195523e-14!GO:0006464;protein modification process;5.59628803367914e-14!GO:0003712;transcription cofactor activity;5.64038294268499e-14!GO:0048770;pigment granule;8.5815007579131e-14!GO:0042470;melanosome;8.5815007579131e-14!GO:0009055;electron carrier activity;5.33774619231109e-13!GO:0048523;negative regulation of cellular process;9.56010757367205e-13!GO:0030016;myofibril;9.84804229209143e-13!GO:0015980;energy derivation by oxidation of organic compounds;1.49089465243257e-12!GO:0006413;translational initiation;2.05066881230409e-12!GO:0006446;regulation of translational initiation;2.10405593977795e-12!GO:0050789;regulation of biological process;2.83758850627161e-12!GO:0051082;unfolded protein binding;3.10326056839061e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.27496946659679e-12!GO:0007517;muscle development;4.67456620756104e-12!GO:0017111;nucleoside-triphosphatase activity;4.84876714204961e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;5.05030165536732e-12!GO:0003743;translation initiation factor activity;5.05030165536732e-12!GO:0006366;transcription from RNA polymerase II promoter;5.64805819640425e-12!GO:0016462;pyrophosphatase activity;5.83205740761661e-12!GO:0003779;actin binding;1.07663012841896e-11!GO:0006461;protein complex assembly;1.4906967237007e-11!GO:0005783;endoplasmic reticulum;1.52106977156503e-11!GO:0017076;purine nucleotide binding;1.52106977156503e-11!GO:0016604;nuclear body;1.84505450784076e-11!GO:0016192;vesicle-mediated transport;1.85407685792292e-11!GO:0008307;structural constituent of muscle;2.34624613728381e-11!GO:0050794;regulation of cellular process;2.49399822995301e-11!GO:0006732;coenzyme metabolic process;3.06587944609435e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.24189805384098e-11!GO:0030017;sarcomere;3.45189019912628e-11!GO:0048519;negative regulation of biological process;4.19234413319406e-11!GO:0008639;small protein conjugating enzyme activity;5.47411154059022e-11!GO:0012501;programmed cell death;7.19706272317998e-11!GO:0045333;cellular respiration;7.80573950171829e-11!GO:0032553;ribonucleotide binding;8.67056551158772e-11!GO:0032555;purine ribonucleotide binding;8.67056551158772e-11!GO:0006915;apoptosis;9.39135804910101e-11!GO:0008565;protein transporter activity;1.10963953598156e-10!GO:0004842;ubiquitin-protein ligase activity;1.16823047462122e-10!GO:0006091;generation of precursor metabolites and energy;1.16877643238489e-10!GO:0006913;nucleocytoplasmic transport;1.32247603568563e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.41666643473581e-10!GO:0009056;catabolic process;1.66927056934383e-10!GO:0019787;small conjugating protein ligase activity;1.9457949224459e-10!GO:0016564;transcription repressor activity;2.8844125702544e-10!GO:0051169;nuclear transport;3.61032616173449e-10!GO:0005635;nuclear envelope;4.10412111346675e-10!GO:0012505;endomembrane system;5.47053697917166e-10!GO:0009060;aerobic respiration;6.92872656247018e-10!GO:0016607;nuclear speck;7.96284158293778e-10!GO:0048193;Golgi vesicle transport;9.8757900265927e-10!GO:0051246;regulation of protein metabolic process;1.09252943178742e-09!GO:0031965;nuclear membrane;1.40239666239406e-09!GO:0042254;ribosome biogenesis and assembly;1.42334601722577e-09!GO:0008219;cell death;1.49227105923666e-09!GO:0016265;death;1.49227105923666e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.50754144089097e-09!GO:0000375;RNA splicing, via transesterification reactions;1.50754144089097e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.50754144089097e-09!GO:0017038;protein import;2.39586181591972e-09!GO:0005794;Golgi apparatus;2.92206962718059e-09!GO:0015078;hydrogen ion transmembrane transporter activity;6.06772801843331e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.41959275240936e-09!GO:0016881;acid-amino acid ligase activity;1.37457470450241e-08!GO:0065007;biological regulation;1.92411539076134e-08!GO:0030554;adenyl nucleotide binding;2.24964179288288e-08!GO:0006084;acetyl-CoA metabolic process;3.28753538977407e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.73029168421423e-08!GO:0005768;endosome;3.80264763776876e-08!GO:0003012;muscle system process;4.8107564130092e-08!GO:0006936;muscle contraction;4.8107564130092e-08!GO:0006099;tricarboxylic acid cycle;4.8107564130092e-08!GO:0046356;acetyl-CoA catabolic process;4.8107564130092e-08!GO:0016529;sarcoplasmic reticulum;6.03581307344663e-08!GO:0016528;sarcoplasm;6.03581307344663e-08!GO:0003713;transcription coactivator activity;6.15733830466528e-08!GO:0030036;actin cytoskeleton organization and biogenesis;6.95688390394211e-08!GO:0009892;negative regulation of metabolic process;7.53638173297611e-08!GO:0003714;transcription corepressor activity;7.64672514636057e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.7494844203454e-08!GO:0031324;negative regulation of cellular metabolic process;8.93284666466891e-08!GO:0030029;actin filament-based process;9.04177821711514e-08!GO:0032559;adenyl ribonucleotide binding;9.14763534051833e-08!GO:0009109;coenzyme catabolic process;9.93469559267044e-08!GO:0006793;phosphorus metabolic process;9.98477908512836e-08!GO:0006796;phosphate metabolic process;9.98477908512836e-08!GO:0005524;ATP binding;1.05641832024123e-07!GO:0019829;cation-transporting ATPase activity;1.57326433508483e-07!GO:0051187;cofactor catabolic process;1.58673507053557e-07!GO:0006163;purine nucleotide metabolic process;1.98215591900841e-07!GO:0044432;endoplasmic reticulum part;1.99074534867211e-07!GO:0016563;transcription activator activity;2.38505705087898e-07!GO:0006259;DNA metabolic process;3.38597200765182e-07!GO:0044453;nuclear membrane part;3.86308853968261e-07!GO:0051188;cofactor biosynthetic process;4.68785468098808e-07!GO:0051170;nuclear import;4.84148700689096e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.46720420383573e-07!GO:0006606;protein import into nucleus;6.10108147317337e-07!GO:0019899;enzyme binding;6.43950962907773e-07!GO:0005793;ER-Golgi intermediate compartment;8.79288381992426e-07!GO:0000151;ubiquitin ligase complex;8.83835763636596e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.14670674712727e-07!GO:0015986;ATP synthesis coupled proton transport;9.39343315829573e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.39343315829573e-07!GO:0016887;ATPase activity;9.65560605816416e-07!GO:0009150;purine ribonucleotide metabolic process;9.6910652521542e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.08527647156328e-06!GO:0005643;nuclear pore;1.17950795939221e-06!GO:0005741;mitochondrial outer membrane;1.27774371127616e-06!GO:0016481;negative regulation of transcription;1.49182977947438e-06!GO:0046034;ATP metabolic process;1.52766772597509e-06!GO:0014706;striated muscle development;1.7791971365077e-06!GO:0045259;proton-transporting ATP synthase complex;1.78474438825223e-06!GO:0042981;regulation of apoptosis;2.14054734473013e-06!GO:0032446;protein modification by small protein conjugation;2.55390823701875e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.69570769627298e-06!GO:0016491;oxidoreductase activity;2.71126869646028e-06!GO:0009259;ribonucleotide metabolic process;2.91212534418529e-06!GO:0016310;phosphorylation;3.13726468939176e-06!GO:0031252;leading edge;3.33984660893008e-06!GO:0065002;intracellular protein transport across a membrane;3.33984660893008e-06!GO:0043067;regulation of programmed cell death;3.35903768135149e-06!GO:0008361;regulation of cell size;3.54745225044001e-06!GO:0006941;striated muscle contraction;3.86431070908853e-06!GO:0043069;negative regulation of programmed cell death;4.01951293770767e-06!GO:0016567;protein ubiquitination;4.06214757875721e-06!GO:0031968;organelle outer membrane;4.17435899399041e-06!GO:0051427;hormone receptor binding;4.72292068603252e-06!GO:0042623;ATPase activity, coupled;4.77432936165224e-06!GO:0006364;rRNA processing;4.7928905414784e-06!GO:0043066;negative regulation of apoptosis;4.83669062581685e-06!GO:0019867;outer membrane;4.90690047971395e-06!GO:0019222;regulation of metabolic process;4.99952546022014e-06!GO:0006164;purine nucleotide biosynthetic process;5.44052760683696e-06!GO:0016049;cell growth;5.99947184233568e-06!GO:0006916;anti-apoptosis;6.97163575477974e-06!GO:0007519;skeletal muscle development;7.09448712766671e-06!GO:0005770;late endosome;8.23650156388997e-06!GO:0050657;nucleic acid transport;8.68741742560817e-06!GO:0051236;establishment of RNA localization;8.68741742560817e-06!GO:0050658;RNA transport;8.68741742560817e-06!GO:0016072;rRNA metabolic process;9.11845738714665e-06!GO:0006403;RNA localization;9.53797875918057e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.79857127409777e-06!GO:0007005;mitochondrion organization and biogenesis;9.84176007332656e-06!GO:0045786;negative regulation of progression through cell cycle;1.03292397816094e-05!GO:0035257;nuclear hormone receptor binding;1.06964498976023e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.09074310671757e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.09074310671757e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.09074310671757e-05!GO:0003924;GTPase activity;1.20054713495751e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.25061625918933e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.25400672445261e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.25400672445261e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.40774138891482e-05!GO:0005523;tropomyosin binding;1.49131203037615e-05!GO:0001558;regulation of cell growth;1.63802747887943e-05!GO:0005667;transcription factor complex;1.69766015170231e-05!GO:0009108;coenzyme biosynthetic process;1.89815110134353e-05!GO:0009141;nucleoside triphosphate metabolic process;1.89815110134353e-05!GO:0006754;ATP biosynthetic process;1.95739869335183e-05!GO:0006753;nucleoside phosphate metabolic process;1.95739869335183e-05!GO:0042802;identical protein binding;1.98590859333874e-05!GO:0005773;vacuole;2.15331351604797e-05!GO:0000245;spliceosome assembly;2.19510221056917e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.39183257390082e-05!GO:0005762;mitochondrial large ribosomal subunit;2.53029591726576e-05!GO:0000315;organellar large ribosomal subunit;2.53029591726576e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.55272087561824e-05!GO:0043038;amino acid activation;2.71528959355632e-05!GO:0006418;tRNA aminoacylation for protein translation;2.71528959355632e-05!GO:0043039;tRNA aminoacylation;2.71528959355632e-05!GO:0031674;I band;2.83349092408629e-05!GO:0006950;response to stress;3.00977615614073e-05!GO:0000314;organellar small ribosomal subunit;3.05923821525461e-05!GO:0005763;mitochondrial small ribosomal subunit;3.05923821525461e-05!GO:0005788;endoplasmic reticulum lumen;3.09767642145258e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.51403256471517e-05!GO:0046930;pore complex;3.83656803190796e-05!GO:0044440;endosomal part;3.83656803190796e-05!GO:0010008;endosome membrane;3.83656803190796e-05!GO:0030120;vesicle coat;3.83656803190796e-05!GO:0030662;coated vesicle membrane;3.83656803190796e-05!GO:0048475;coated membrane;3.88530801125446e-05!GO:0030117;membrane coat;3.88530801125446e-05!GO:0006888;ER to Golgi vesicle-mediated transport;4.11650103734439e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.56183578730423e-05!GO:0016044;membrane organization and biogenesis;4.73633117846333e-05!GO:0043566;structure-specific DNA binding;5.33845415702006e-05!GO:0005865;striated muscle thin filament;5.40178603441207e-05!GO:0031988;membrane-bound vesicle;5.7215728284891e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.23967192966678e-05!GO:0005525;GTP binding;6.23967192966678e-05!GO:0009260;ribonucleotide biosynthetic process;6.45516154668199e-05!GO:0003697;single-stranded DNA binding;6.7243880822188e-05!GO:0031982;vesicle;7.26935232401505e-05!GO:0016568;chromatin modification;7.59226749852491e-05!GO:0051128;regulation of cellular component organization and biogenesis;7.8056851347328e-05!GO:0005798;Golgi-associated vesicle;8.77430197832869e-05!GO:0016023;cytoplasmic membrane-bound vesicle;8.84920953887008e-05!GO:0008026;ATP-dependent helicase activity;0.000108152913618572!GO:0048471;perinuclear region of cytoplasm;0.000113707735677589!GO:0004298;threonine endopeptidase activity;0.000116028174849118!GO:0006974;response to DNA damage stimulus;0.000125179128535587!GO:0048522;positive regulation of cellular process;0.00012935882474211!GO:0005977;glycogen metabolic process;0.000134231191683478!GO:0007010;cytoskeleton organization and biogenesis;0.000139057841331861!GO:0045892;negative regulation of transcription, DNA-dependent;0.000147932402702866!GO:0031410;cytoplasmic vesicle;0.000150116482318659!GO:0000323;lytic vacuole;0.000150968209842306!GO:0005764;lysosome;0.000150968209842306!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000155224905507349!GO:0009142;nucleoside triphosphate biosynthetic process;0.000156193210395901!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000156193210395901!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000157652395999079!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000157652395999079!GO:0006399;tRNA metabolic process;0.000158832575791552!GO:0040008;regulation of growth;0.000158832575791552!GO:0003746;translation elongation factor activity;0.000161104205186063!GO:0009117;nucleotide metabolic process;0.000164259057932704!GO:0051789;response to protein stimulus;0.000165009625776954!GO:0006986;response to unfolded protein;0.000165009625776954!GO:0005789;endoplasmic reticulum membrane;0.000184106400035139!GO:0051028;mRNA transport;0.000184900361466727!GO:0008286;insulin receptor signaling pathway;0.000188873372319391!GO:0030133;transport vesicle;0.000199235750575351!GO:0006414;translational elongation;0.000227935141853212!GO:0043284;biopolymer biosynthetic process;0.00025490576676756!GO:0003724;RNA helicase activity;0.000260877871804463!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000323334700867386!GO:0015002;heme-copper terminal oxidase activity;0.000323334700867386!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000323334700867386!GO:0004129;cytochrome-c oxidase activity;0.000323334700867386!GO:0032561;guanyl ribonucleotide binding;0.000348280884975828!GO:0019001;guanyl nucleotide binding;0.000348280884975828!GO:0007243;protein kinase cascade;0.000354855121025053!GO:0043623;cellular protein complex assembly;0.000390128144092091!GO:0044262;cellular carbohydrate metabolic process;0.000410091899852875!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000441828005286973!GO:0006613;cotranslational protein targeting to membrane;0.000463105427345641!GO:0006073;glucan metabolic process;0.000480182701135626!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000481296212420382!GO:0030518;steroid hormone receptor signaling pathway;0.000485567364124842!GO:0051287;NAD binding;0.000498243478682945!GO:0043021;ribonucleoprotein binding;0.000520126971119413!GO:0004386;helicase activity;0.000534607417925393!GO:0009719;response to endogenous stimulus;0.00057498514771154!GO:0007264;small GTPase mediated signal transduction;0.000581496547638749!GO:0035258;steroid hormone receptor binding;0.000609421767131361!GO:0007050;cell cycle arrest;0.000617400375648354!GO:0006402;mRNA catabolic process;0.000620879787801859!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000661450665458203!GO:0007049;cell cycle;0.000694747803380692!GO:0033017;sarcoplasmic reticulum membrane;0.000703572476644776!GO:0031072;heat shock protein binding;0.000704422030180804!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000708579494329334!GO:0006635;fatty acid beta-oxidation;0.000718341014091611!GO:0051087;chaperone binding;0.000730697270849669!GO:0045941;positive regulation of transcription;0.000730697270849669!GO:0005769;early endosome;0.000742313200369322!GO:0050662;coenzyme binding;0.000793634306241889!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00081427130597711!GO:0051540;metal cluster binding;0.00081427130597711!GO:0051536;iron-sulfur cluster binding;0.00081427130597711!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000894641426636692!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000894641426636692!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000894641426636692!GO:0022890;inorganic cation transmembrane transporter activity;0.000898961613881938!GO:0006979;response to oxidative stress;0.000899005910079242!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000899015024624522!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00091349633247954!GO:0000074;regulation of progression through cell cycle;0.000932534419721248!GO:0016197;endosome transport;0.000940804818866838!GO:0051726;regulation of cell cycle;0.0009580570789287!GO:0045893;positive regulation of transcription, DNA-dependent;0.000970766688828136!GO:0044431;Golgi apparatus part;0.00107406998598807!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00107742754077363!GO:0006752;group transfer coenzyme metabolic process;0.00109153276026623!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00113171444782609!GO:0030018;Z disc;0.00124412885354905!GO:0048518;positive regulation of biological process;0.001302745135493!GO:0030521;androgen receptor signaling pathway;0.00132437970875684!GO:0003702;RNA polymerase II transcription factor activity;0.00134680020087778!GO:0006897;endocytosis;0.00135371750419625!GO:0010324;membrane invagination;0.00135371750419625!GO:0031323;regulation of cellular metabolic process;0.0013855096273359!GO:0030880;RNA polymerase complex;0.00141584271442453!GO:0046983;protein dimerization activity;0.0014644042514833!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00147342585008264!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00152314259191654!GO:0001726;ruffle;0.00155308811911753!GO:0007265;Ras protein signal transduction;0.00160906670647876!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00165196851291918!GO:0033673;negative regulation of kinase activity;0.00174304281117758!GO:0006469;negative regulation of protein kinase activity;0.00174304281117758!GO:0015992;proton transport;0.00178527252710568!GO:0005791;rough endoplasmic reticulum;0.00196343666274285!GO:0046314;phosphocreatine biosynthetic process;0.001994986457085!GO:0006603;phosphocreatine metabolic process;0.001994986457085!GO:0008287;protein serine/threonine phosphatase complex;0.00211046326421682!GO:0051252;regulation of RNA metabolic process;0.0021179484987788!GO:0030027;lamellipodium;0.00217341669524655!GO:0006323;DNA packaging;0.00233745426470963!GO:0006818;hydrogen transport;0.00236601071424938!GO:0006118;electron transport;0.00240850185755909!GO:0043488;regulation of mRNA stability;0.00245699441261292!GO:0043487;regulation of RNA stability;0.00245699441261292!GO:0031902;late endosome membrane;0.00251934111407942!GO:0016779;nucleotidyltransferase activity;0.00253404483552995!GO:0045947;negative regulation of translational initiation;0.00261003511567197!GO:0030522;intracellular receptor-mediated signaling pathway;0.00269501082162668!GO:0051920;peroxiredoxin activity;0.00286428863178655!GO:0008186;RNA-dependent ATPase activity;0.0028973285261738!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00297268698288655!GO:0000428;DNA-directed RNA polymerase complex;0.00297268698288655!GO:0005905;coated pit;0.00302132986557214!GO:0016791;phosphoric monoester hydrolase activity;0.00308206987801875!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0032091838802318!GO:0019752;carboxylic acid metabolic process;0.00325137474780089!GO:0003899;DNA-directed RNA polymerase activity;0.00327248831755209!GO:0006112;energy reserve metabolic process;0.00336221520912855!GO:0006082;organic acid metabolic process;0.00339548654791387!GO:0005856;cytoskeleton;0.00353196971620014!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00356385836602735!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00356385836602735!GO:0006417;regulation of translation;0.00361890061982661!GO:0051168;nuclear export;0.00364572546197556!GO:0019843;rRNA binding;0.00365729750946439!GO:0006839;mitochondrial transport;0.00369654576349264!GO:0016853;isomerase activity;0.00374005141564691!GO:0008654;phospholipid biosynthetic process;0.00375042943887494!GO:0015631;tubulin binding;0.00377686454076891!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00384256936907513!GO:0030132;clathrin coat of coated pit;0.00387608077281565!GO:0043681;protein import into mitochondrion;0.00387608077281565!GO:0048487;beta-tubulin binding;0.00394187155168372!GO:0001666;response to hypoxia;0.00415954563576551!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00417659447467933!GO:0006350;transcription;0.00420818380758356!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00437730392452694!GO:0051539;4 iron, 4 sulfur cluster binding;0.00438633597394404!GO:0019783;small conjugating protein-specific protease activity;0.00451695640976027!GO:0051348;negative regulation of transferase activity;0.00470519147610095!GO:0008180;signalosome;0.00477904851258846!GO:0045454;cell redox homeostasis;0.00478248124888551!GO:0004843;ubiquitin-specific protease activity;0.0049479324698889!GO:0031326;regulation of cellular biosynthetic process;0.0052992299095294!GO:0016859;cis-trans isomerase activity;0.00538586271122591!GO:0006401;RNA catabolic process;0.00540221253481481!GO:0048741;skeletal muscle fiber development;0.00564604726387234!GO:0048747;muscle fiber development;0.00564604726387234!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00571777703637764!GO:0007006;mitochondrial membrane organization and biogenesis;0.0057524164659686!GO:0030867;rough endoplasmic reticulum membrane;0.00584063720341494!GO:0010468;regulation of gene expression;0.0058857761431091!GO:0005048;signal sequence binding;0.00605299057077261!GO:0009889;regulation of biosynthetic process;0.00617624709411886!GO:0005790;smooth endoplasmic reticulum;0.00652486491919555!GO:0005869;dynactin complex;0.00687749792492156!GO:0006607;NLS-bearing substrate import into nucleus;0.00688338995012553!GO:0019395;fatty acid oxidation;0.00694010699328012!GO:0006612;protein targeting to membrane;0.00705596832086961!GO:0006006;glucose metabolic process;0.00708607279229692!GO:0004004;ATP-dependent RNA helicase activity;0.00714590968352799!GO:0051289;protein homotetramerization;0.00735637206371867!GO:0004674;protein serine/threonine kinase activity;0.00738832858723857!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00771437490507149!GO:0015399;primary active transmembrane transporter activity;0.00771437490507149!GO:0015036;disulfide oxidoreductase activity;0.00804928534258786!GO:0042805;actinin binding;0.00819281203935214!GO:0045098;type III intermediate filament;0.00833280057585164!GO:0008139;nuclear localization sequence binding;0.00836983180484409!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00848644719923449!GO:0005813;centrosome;0.00859323614543537!GO:0004721;phosphoprotein phosphatase activity;0.00865239390710647!GO:0003729;mRNA binding;0.0089293271083499!GO:0004722;protein serine/threonine phosphatase activity;0.00893796740377412!GO:0004221;ubiquitin thiolesterase activity;0.00916940823136925!GO:0006595;polyamine metabolic process;0.0092290426792952!GO:0065009;regulation of a molecular function;0.0094896797139351!GO:0005859;muscle myosin complex;0.0095780175531418!GO:0031625;ubiquitin protein ligase binding;0.00989574902388443!GO:0008234;cysteine-type peptidase activity;0.0100071856685084!GO:0005862;muscle thin filament tropomyosin;0.0100973174302498!GO:0051098;regulation of binding;0.0101388068584342!GO:0006942;regulation of striated muscle contraction;0.010321058201771!GO:0006281;DNA repair;0.0104565809522894!GO:0048500;signal recognition particle;0.0104565809522894!GO:0005885;Arp2/3 protein complex;0.0105970105848321!GO:0048468;cell development;0.0106478792560041!GO:0030663;COPI coated vesicle membrane;0.0107056062756875!GO:0030126;COPI vesicle coat;0.0107056062756875!GO:0000059;protein import into nucleus, docking;0.0108503893211839!GO:0019902;phosphatase binding;0.0108936621911257!GO:0033018;sarcoplasmic reticulum lumen;0.0113760213369238!GO:0003690;double-stranded DNA binding;0.0113760213369238!GO:0031032;actomyosin structure organization and biogenesis;0.0119720558217921!GO:0030118;clathrin coat;0.0124235287387063!GO:0050681;androgen receptor binding;0.0124235287387063!GO:0016787;hydrolase activity;0.0132338808247333!GO:0005912;adherens junction;0.013415661782888!GO:0005774;vacuolar membrane;0.0138792326917613!GO:0009165;nucleotide biosynthetic process;0.0139878057692608!GO:0009966;regulation of signal transduction;0.0141920661647677!GO:0006891;intra-Golgi vesicle-mediated transport;0.0141920661647677!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0142327760616099!GO:0004177;aminopeptidase activity;0.014313937690087!GO:0006007;glucose catabolic process;0.0144336469305235!GO:0044264;cellular polysaccharide metabolic process;0.0144336469305235!GO:0008017;microtubule binding;0.0145766348982871!GO:0008250;oligosaccharyl transferase complex;0.0148606476361234!GO:0006626;protein targeting to mitochondrion;0.0150848820127766!GO:0008383;manganese superoxide dismutase activity;0.0150852424218004!GO:0001315;age-dependent response to reactive oxygen species;0.0150852424218004!GO:0006354;RNA elongation;0.0152456491668183!GO:0016460;myosin II complex;0.0158104148821736!GO:0048037;cofactor binding;0.0163580292356997!GO:0050811;GABA receptor binding;0.0164796415199089!GO:0044452;nucleolar part;0.0164796415199089!GO:0045792;negative regulation of cell size;0.0165919454773647!GO:0006260;DNA replication;0.0165962408291715!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0167470359362643!GO:0033043;regulation of organelle organization and biogenesis;0.0167470359362643!GO:0001725;stress fiber;0.0167470359362643!GO:0032432;actin filament bundle;0.0167470359362643!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0171853827828553!GO:0016272;prefoldin complex;0.0175399889886577!GO:0035035;histone acetyltransferase binding;0.0175399889886577!GO:0006650;glycerophospholipid metabolic process;0.0175860046515461!GO:0045445;myoblast differentiation;0.0177520120610438!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.01789568620486!GO:0005976;polysaccharide metabolic process;0.0187632575042046!GO:0046474;glycerophospholipid biosynthetic process;0.0188025762726251!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0192248812061637!GO:0016311;dephosphorylation;0.0194660911327993!GO:0030658;transport vesicle membrane;0.0197742831947343!GO:0030308;negative regulation of cell growth;0.0200337764344866!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0200337764344866!GO:0017166;vinculin binding;0.0202308353520809!GO:0031589;cell-substrate adhesion;0.0202308353520809!GO:0051248;negative regulation of protein metabolic process;0.0206164689073057!GO:0030055;cell-matrix junction;0.020681694563424!GO:0022402;cell cycle process;0.0213667136683387!GO:0008154;actin polymerization and/or depolymerization;0.0215143150827016!GO:0030100;regulation of endocytosis;0.0219770006219817!GO:0006352;transcription initiation;0.0219911884754305!GO:0030140;trans-Golgi network transport vesicle;0.0222761546756912!GO:0016790;thiolester hydrolase activity;0.0223505506774867!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0225387966572936!GO:0006383;transcription from RNA polymerase III promoter;0.0230207901753086!GO:0047485;protein N-terminus binding;0.0231050950445119!GO:0007242;intracellular signaling cascade;0.023106256906939!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0231174266682224!GO:0016363;nuclear matrix;0.0238545274447323!GO:0019318;hexose metabolic process;0.0238976354261191!GO:0003711;transcription elongation regulator activity;0.0238976354261191!GO:0005924;cell-substrate adherens junction;0.0241627462691855!GO:0030137;COPI-coated vesicle;0.0242205906589091!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0243314675335746!GO:0010257;NADH dehydrogenase complex assembly;0.0243314675335746!GO:0033108;mitochondrial respiratory chain complex assembly;0.0243314675335746!GO:0043492;ATPase activity, coupled to movement of substances;0.0244570270684136!GO:0006376;mRNA splice site selection;0.0245426592496765!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0245426592496765!GO:0007266;Rho protein signal transduction;0.0247072223603288!GO:0016740;transferase activity;0.0248357161521426!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0248357161521426!GO:0045047;protein targeting to ER;0.0248357161521426!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0248454484828065!GO:0008312;7S RNA binding;0.025441664445656!GO:0019903;protein phosphatase binding;0.027097396116847!GO:0006611;protein export from nucleus;0.0273154718476769!GO:0004576;oligosaccharyl transferase activity;0.0274438429635288!GO:0005815;microtubule organizing center;0.0280983151709831!GO:0019208;phosphatase regulator activity;0.0285217321195646!GO:0009893;positive regulation of metabolic process;0.0293427783382036!GO:0051101;regulation of DNA binding;0.0295274696786297!GO:0005765;lysosomal membrane;0.0298960480331421!GO:0048041;focal adhesion formation;0.0302138195594447!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0304805034375318!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0306563169139454!GO:0051276;chromosome organization and biogenesis;0.0307427701161962!GO:0000139;Golgi membrane;0.0307427701161962!GO:0019904;protein domain specific binding;0.0311910030682012!GO:0051393;alpha-actinin binding;0.0314408815328145!GO:0016405;CoA-ligase activity;0.0317362394021891!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0320338266950495!GO:0006778;porphyrin metabolic process;0.0327637988289266!GO:0033013;tetrapyrrole metabolic process;0.0327637988289266!GO:0005832;chaperonin-containing T-complex;0.0327637988289266!GO:0051260;protein homooligomerization;0.0328619696564014!GO:0005861;troponin complex;0.0329215507949391!GO:0006892;post-Golgi vesicle-mediated transport;0.0333311585735261!GO:0030134;ER to Golgi transport vesicle;0.0335499045670385!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0339652214396534!GO:0017022;myosin binding;0.0340452522236725!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.034535939995165!GO:0000159;protein phosphatase type 2A complex;0.0348748978933499!GO:0008601;protein phosphatase type 2A regulator activity;0.0353884244841686!GO:0009967;positive regulation of signal transduction;0.0353989541790515!GO:0006518;peptide metabolic process;0.0354220316625203!GO:0000209;protein polyubiquitination;0.0358339807501607!GO:0043065;positive regulation of apoptosis;0.0367152209377016!GO:0005684;U2-dependent spliceosome;0.0373941512480533!GO:0006695;cholesterol biosynthetic process;0.0375986218602764!GO:0007034;vacuolar transport;0.0376528786151586!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0377373746475254!GO:0006631;fatty acid metabolic process;0.0379506556637661!GO:0044437;vacuolar part;0.0379506556637661!GO:0031461;cullin-RING ubiquitin ligase complex;0.0380955559318612!GO:0007160;cell-matrix adhesion;0.0380955559318612!GO:0001944;vasculature development;0.0385225419828585!GO:0048659;smooth muscle cell proliferation;0.0385542221908116!GO:0005996;monosaccharide metabolic process;0.0386246921853279!GO:0016251;general RNA polymerase II transcription factor activity;0.0389071921775278!GO:0016126;sterol biosynthetic process;0.0394349011357112!GO:0033116;ER-Golgi intermediate compartment membrane;0.0398393433717705!GO:0043022;ribosome binding;0.040900911937921!GO:0030660;Golgi-associated vesicle membrane;0.0419914521992058!GO:0051262;protein tetramerization;0.0421589262805503!GO:0006351;transcription, DNA-dependent;0.0422332509328929!GO:0032774;RNA biosynthetic process;0.0432051354893269!GO:0030911;TPR domain binding;0.0434708069458469!GO:0000060;protein import into nucleus, translocation;0.043637030769099!GO:0006779;porphyrin biosynthetic process;0.043637030769099!GO:0033014;tetrapyrrole biosynthetic process;0.043637030769099!GO:0004111;creatine kinase activity;0.043637030769099!GO:0014866;skeletal myofibril assembly;0.0446300045872949!GO:0032787;monocarboxylic acid metabolic process;0.0448478324716136!GO:0000096;sulfur amino acid metabolic process;0.0455181619946209!GO:0043068;positive regulation of programmed cell death;0.0468309695834359!GO:0055001;muscle cell development;0.0473149572097984!GO:0030239;myofibril assembly;0.0473149572097984!GO:0055002;striated muscle cell development;0.0473149572097984!GO:0006937;regulation of muscle contraction;0.0474869386111047!GO:0015630;microtubule cytoskeleton;0.0476013361820885!GO:0051370;ZASP binding;0.0476623223599296!GO:0051374;FATZ 1 binding;0.0476623223599296!GO:0008629;induction of apoptosis by intracellular signals;0.0479787478093205!GO:0031901;early endosome membrane;0.0482812789346424!GO:0046467;membrane lipid biosynthetic process;0.0489037437331808!GO:0004300;enoyl-CoA hydratase activity;0.0497208760332068!GO:0032535;regulation of cellular component size;0.0497733750317337
|sample_id=10023
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skeletal muscle
|top_motifs=MEF2{A,B,C,D}:7.94112847148;NR1H4:4.79944954124;FOXL1:3.8639796894;NFE2L1:3.71903709557;NR5A1,2:3.68661967348;AR:3.5408665247;ESRRA:3.50270092203;PDX1:3.46119976025;MYOD1:3.2871534463;NKX2-2,8:3.07178063432;TLX2:2.81596630824;HOX{A4,D4}:2.80642997834;MAFB:2.59615221606;SPZ1:2.58014873508;NFIX:2.48063006716;NHLH1,2:2.47500766093;TGIF1:2.40807532562;NR6A1:2.3551834701;SOX5:2.34132470459;SRF:2.25641150569;RORA:2.24994654335;SMAD1..7,9:2.24283925828;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.17747406279;RXR{A,B,G}:2.08012308852;ESR1:2.02000651855;NKX3-2:1.91514384142;IKZF2:1.87666225722;ATF2:1.84036222831;FOX{D1,D2}:1.79331719837;TFAP4:1.77989921921;POU6F1:1.7230746314;HAND1,2:1.71420106306;STAT5{A,B}:1.69581654742;TFAP2{A,C}:1.66921412162;FOXQ1:1.6198897969;HSF1,2:1.54954267298;PATZ1:1.52892243887;NFATC1..3:1.52630459572;EVI1:1.42977058049;FOXO1,3,4:1.41116901982;CUX2:1.39895568459;TBP:1.38139153605;PAX6:1.37459136533;HES1:1.37305026087;YY1:1.36909851296;NKX6-1,2:1.3674591793;GCM1,2:1.36703636086;GATA4:1.34804799248;POU1F1:1.31864559645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.2668402868;HOX{A6,A7,B6,B7}:1.20726178227;ARID5B:1.1990256978;FOXP3:1.18370179883;GLI1..3:1.16266494615;BPTF:1.16098199012;FOX{F1,F2,J1}:1.14850451471;POU3F1..4:1.10880089968;MTF1:1.09038928986;UFEwm:1.02721790148;TFCP2:1.00924977493;GTF2A1,2:0.992661725573;RREB1:0.989763978833;STAT2,4,6:0.983410558029;TLX1..3_NFIC{dimer}:0.972702705279;FOXM1:0.953672221865;LMO2:0.948526721194;HIC1:0.933309682992;PAX1,9:0.915737126536;ZNF423:0.882579180557;ALX4:0.878687935716;MAZ:0.850713235121;MYBL2:0.756223010045;EN1,2:0.752096333372;TEAD1:0.745389816878;IKZF1:0.709449773568;TFAP2B:0.690756274676;LEF1_TCF7_TCF7L1,2:0.680223012289;TBX4,5:0.674717660743;ZIC1..3:0.65583877547;IRF7:0.654399922835;NR3C1:0.639786897769;MYFfamily:0.62373291495;MED-1{core}:0.614301731934;RFX2..5_RFXANK_RFXAP:0.609044896646;ATF4:0.57650955933;SREBF1,2:0.565816001166;KLF4:0.530140824838;NKX2-1,4:0.521162114957;MTE{core}:0.519990993944;MZF1:0.500609784639;PBX1:0.492579157707;bHLH_family:0.479144623901;TP53:0.478230757145;ZBTB16:0.46809468577;GFI1B:0.449640911061;CDX1,2,4:0.422081366599;REST:0.420605209421;PPARG:0.399161589704;SNAI1..3:0.387069031573;EGR1..3:0.379037423282;ZNF238:0.35590460711;JUN:0.349451544471;DMAP1_NCOR{1,2}_SMARC:0.349302485212;GTF2I:0.344186303116;SP1:0.297569996932;ZNF384:0.292003337706;XBP1:0.284373933871;HMX1:0.2436941172;HNF4A_NR2F1,2:0.23847185036;ALX1:0.234402691845;PAX5:0.226382094609;ZFP161:0.20258500328;FOSL2:0.20058807087;RXRA_VDR{dimer}:0.184530874744;NFE2L2:0.123784563426;HMGA1,2:0.100889366495;ZNF148:0.1002359861;TEF:0.0867792229707;RBPJ:0.0676979977482;EP300:0.0673385880823;FOXA2:0.0669961028744;NANOG{mouse}:0.0562242851893;TAL1_TCF{3,4,12}:0.0483090244245;NFE2:0.0449240229532;PAX2:0.0359761414503;CEBPA,B_DDIT3:0.0315410125232;ZNF143:0.0294035069586;SOX{8,9,10}:0.0261638042258;HLF:0.0085376706691;BREu{core}:-0.0171651001091;PAX3,7:-0.0291010359768;ATF5_CREB3:-0.0348208735992;ZBTB6:-0.0381120171425;LHX3,4:-0.101125298696;ETS1,2:-0.155550906697;SOX17:-0.176995620099;NKX2-3_NKX2-5:-0.184125607147;ATF6:-0.190872537134;FOXN1:-0.192946746868;FOX{I1,J2}:-0.194954234649;NKX3-1:-0.204146809591;ZEB1:-0.215101761785;SPI1:-0.224703866598;CRX:-0.253605201899;IRF1,2:-0.275727666611;HNF1A:-0.294951463604;PRDM1:-0.324282524928;NFKB1_REL_RELA:-0.338895247863;STAT1,3:-0.361242915572;GZF1:-0.396132840642;HOX{A5,B5}:-0.43745760284;NFIL3:-0.448804981764;FOS_FOS{B,L1}_JUN{B,D}:-0.464467262692;SPIB:-0.467806277027;NRF1:-0.511474368602;BACH2:-0.589417966393;T:-0.649643162635;PITX1..3:-0.680436242592;ELF1,2,4:-0.685344922779;EBF1:-0.700607703341;GATA6:-0.706621817034;NANOG:-0.773405349523;HBP1_HMGB_SSRP1_UBTF:-0.785446293272;AHR_ARNT_ARNT2:-0.807705421297;PAX4:-0.812889197401;RUNX1..3:-0.818998441277;CREB1:-0.845375117909;TOPORS:-0.8544630775;NFY{A,B,C}:-0.862222990676;E2F1..5:-0.87025801861;TFDP1:-0.923697806177;HOXA9_MEIS1:-0.948638603929;FOXP1:-0.99315643176;PRRX1,2:-1.06973431544;CDC5L:-1.12493468093;OCT4_SOX2{dimer}:-1.14689585632;ONECUT1,2:-1.15688336308;XCPE1{core}:-1.24799380652;ADNP_IRX_SIX_ZHX:-1.25254288845;MYB:-1.25470719103;RFX1:-1.28115550972;GFI1:-1.315990732;SOX2:-1.32813318954;FOXD3:-1.39414290465;HIF1A:-1.44059983554;ELK1,4_GABP{A,B1}:-1.45562233041;VSX1,2:-1.61198434344;DBP:-1.71340317384;AIRE:-1.82489173902;POU5F1:-2.01468768523;POU2F1..3:-2.13134231287;PAX8:-2.35739812734
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10023-101D5;search_select_hide=table117:FF:10023-101D5
}}
}}

Latest revision as of 12:14, 3 June 2020

Name:skeletal muscle, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10629
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskeletal muscle
dev stage55,79,79 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyAmbion
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number0910061 -14
catalog numberCat:AM6000 Lot:0910061 -14
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005588
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10629 CAGE DRX008720 DRR009592
Accession ID Hg19

Library idBAMCTSS
CNhs10629 DRZ001017 DRZ002402
Accession ID Hg38

Library idBAMCTSS
CNhs10629 DRZ012367 DRZ013752
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.042
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.47
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0.336
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.307
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.18
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.122
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.232
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0811
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0424
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0.492
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.355
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0.0424
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.15
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.387
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.016
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0424
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-1.116
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0424
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0774
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.209
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.117
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00972
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.553
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus4.206229e-4
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0424
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.208
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0424
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0.0424
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.0811
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus1.021
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0.78
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0.0424
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0424
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0424
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left1.027
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0.773
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10629

Jaspar motifP-value
MA0002.20.0244
MA0003.10.184
MA0004.10.993
MA0006.10.351
MA0007.10.485
MA0009.10.127
MA0014.10.449
MA0017.10.0949
MA0018.20.125
MA0019.10.101
MA0024.19.08118e-4
MA0025.10.243
MA0027.10.651
MA0028.11.53694e-7
MA0029.10.968
MA0030.10.01
MA0031.10.0367
MA0035.20.486
MA0038.10.00528
MA0039.20.00161
MA0040.10.375
MA0041.10.213
MA0042.10.243
MA0043.10.032
MA0046.10.615
MA0047.20.146
MA0048.11.46164e-5
MA0050.10.0039
MA0051.10.197
MA0052.13.12138e-44
MA0055.11.12303e-5
MA0057.10.98
MA0058.10.952
MA0059.10.554
MA0060.13.76103e-5
MA0061.10.0102
MA0062.21.95594e-15
MA0065.20.0308
MA0066.10.281
MA0067.10.706
MA0068.10.0415
MA0069.10.71
MA0070.10.621
MA0071.10.142
MA0072.10.631
MA0073.10.568
MA0074.10.53
MA0076.14.47677e-8
MA0077.10.131
MA0078.10.263
MA0079.20.961
MA0080.25.33263e-6
MA0081.10.0217
MA0083.10.00425
MA0084.10.834
MA0087.10.371
MA0088.10.208
MA0090.10.141
MA0091.10.00252
MA0092.10.129
MA0093.10.983
MA0099.21.86655e-5
MA0100.10.0422
MA0101.10.0222
MA0102.20.0481
MA0103.10.625
MA0104.20.34
MA0105.10.0325
MA0106.10.436
MA0107.10.00997
MA0108.25.62196e-17
MA0111.10.923
MA0112.23.28312e-4
MA0113.16.38467e-4
MA0114.10.131
MA0115.10.0493
MA0116.10.0799
MA0117.10.744
MA0119.10.165
MA0122.10.103
MA0124.10.633
MA0125.10.358
MA0131.10.0245
MA0135.10.971
MA0136.13.6327e-8
MA0137.20.551
MA0138.20.855
MA0139.10.131
MA0140.10.388
MA0141.10.00142
MA0142.10.0552
MA0143.10.423
MA0144.10.424
MA0145.10.0797
MA0146.10.395
MA0147.10.276
MA0148.10.153
MA0149.10.214
MA0150.10.921
MA0152.10.729
MA0153.10.2
MA0154.10.993
MA0155.10.115
MA0156.19.14842e-12
MA0157.10.0783
MA0159.10.13
MA0160.10.0146
MA0162.10.565
MA0163.10.0824
MA0164.10.637
MA0258.10.00704
MA0259.10.254



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10629

Novel motifP-value
10.568
100.656
1000.427
1010.0996
1020.678
1030.562
1040.987
1050.478
1060.157
1070.0661
1080.251
1090.56
110.735
1100.315
1110.755
1120.191
1130.895
1140.679
1150.524
1160.424
1170.218
1180.0572
1190.0778
120.963
1200.172
1210.962
1220.295
1230.0641
1240.263
1250.694
1260.607
1270.788
1280.064
1290.902
130.608
1300.872
1310.154
1320.389
1330.00154
1340.124
1350.0561
1360.496
1370.757
1380.918
1390.00829
140.205
1400.355
1410.928
1420.785
1430.0241
1440.585
1450.836
1460.318
1470.00153
1480.28
1490.0792
150.874
1500.644
1510.147
1520.414
1530.125
1540.986
1550.546
1560.219
1570.505
1580.492
1590.586
160.543
1600.717
1610.2
1620.771
1630.49
1640.113
1650.0174
1660.427
1670.388
1680.597
1690.128
170.863
180.64
190.0208
20.141
200.0255
210.417
220.0552
230.181
240.242
250.706
260.343
270.648
280.609
290.0975
30.896
300.153
310.494
320.556
330.346
340.328
350.451
360.05
370.472
380.961
390.0405
40.996
400.0387
410.395
420.399
430.687
440.0203
450.13
460.869
470.409
480.442
490.923
50.388
500.502
510.909
520.0701
530.644
540.488
550.195
560.824
570.766
580.58
590.516
60.815
600.0617
610.791
620.223
630.205
640.613
650.344
660.0273
670.549
680.373
690.515
70.229
700.314
710.376
720.356
730.537
740.414
750.399
760.184
770.0783
780.123
790.0231
80.672
800.575
810.485
820.381
830.632
840.302
850.0132
860.375
870.461
880.992
890.128
90.376
900.993
910.311
920.177
930.862
940.518
950.0582
960.406
970.94
980.1
990.438



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10629


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010023 (human skeletal muscle - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0003104 (mesenchyme)
UBERON:0010316 (germ layer / neural crest)

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