FFCP PHASE1:Hg19::chr10:11371311..11371330,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr10:11371311..11371330,+ to FFCP PHASE1:Hg19::chr10:11371311..11371330,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:11371311..11371330,+ | |||
|description=CAGE_peak_at_chr10:11371311..11371330,+ | |||
|id=chr10:11371311..11371330,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.15e-43!140;CL:0000037!2.85e-41!172;CL:0000566!2.85e-41!172;CL:0002032!1.52e-40!165;CL:0000837!1.52e-40!165;CL:0002087!5.11e-39!119;CL:0002031!2.59e-38!124;CL:0000988!3.36e-37!182;CL:0000766!3.40e-33!76;CL:0000839!4.62e-31!70;CL:0000557!2.27e-30!71;CL:0000763!1.91e-29!112;CL:0000049!1.91e-29!112;CL:0002194!1.09e-27!63;CL:0000576!1.09e-27!63;CL:0000040!1.09e-27!63;CL:0000559!1.09e-27!63;CL:0002009!2.41e-26!65;CL:0002057!6.39e-26!42;CL:0000860!2.41e-23!45;CL:0000542!5.60e-10!53;CL:0000051!5.60e-10!53;CL:0000838!1.59e-09!52;CL:0000134!2.46e-07!358;CL:0002274!8.16e-07!5;CL:0000457!8.16e-07!5;CL:0002191!8.16e-07!5;CL:0000097!8.16e-07!5;CL:0000831!8.16e-07!5;CL:0002028!8.16e-07!5;CL:0002320!9.47e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000226;2.26e-10;3!CL:0000842;2.26e-10;3!CL:0000473;5.89e-10;39!CL:0000234;5.89e-10;39!CL:0000860;9.12e-09;33!CL:0002057;9.12e-09;33!CL:0000766;9.67e-08;69!CL:0000576;2.44e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.40e-16,48;CL:0000234,4.40e-16,48;CL:0000738,4.03e-15,136;CL:0002087,1.69e-14,115;CL:0000766,4.92e-14,72;CL:0000839,3.98e-13,66;CL:0000557,6.67e-13,67;CL:0002194,1.75e-12,59;CL:0000576,1.75e-12,59;CL:0000040,1.75e-12,59;CL:0000559,1.75e-12,59;CL:0000860,2.08e-12,42;CL:0002057,2.08e-12,42;CL:0002009,5.09e-12,61;CL:0002031,5.41e-12,120;CL:0000037,1.43e-11,168;CL:0000988,8.40e-11,177;CL:0000226,1.87e-10,3;CL:0000842,1.87e-10,3;CL:0002032,2.00e-09,161;CL:0000837,2.00e-09,161;CL:0000763,1.30e-08,108;CL:0000049,1.30e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.11e-27!102;UBERON:0003061!3.11e-27!102;UBERON:0002371!5.87e-25!80;UBERON:0002193!4.69e-24!112;UBERON:0001474!5.20e-22!86;UBERON:0004765!2.82e-17!101;UBERON:0001434!2.82e-17!101;UBERON:0002405!7.29e-17!115;UBERON:0002020!1.51e-16!34;UBERON:0003528!1.51e-16!34;UBERON:0001869!1.86e-16!32;UBERON:0001893!4.99e-15!34;UBERON:0002780!6.22e-15!41;UBERON:0001890!6.22e-15!41;UBERON:0006240!6.22e-15!41;UBERON:0001049!9.26e-15!57;UBERON:0005068!9.26e-15!57;UBERON:0006241!9.26e-15!57;UBERON:0007135!9.26e-15!57;UBERON:0002791!2.23e-14!33;UBERON:0003080!2.28e-14!42;UBERON:0002616!7.55e-14!59;UBERON:0002619!3.07e-13!22;UBERON:0000956!2.23e-12!25;UBERON:0000203!2.23e-12!25;UBERON:0000955!1.03e-11!69;UBERON:0006238!1.03e-11!69;UBERON:0001017!3.68e-11!82;UBERON:0001950!4.75e-11!20;UBERON:0005743!4.03e-10!86;UBERON:0007023!8.91e-09!115;UBERON:0003075!9.23e-09!86;UBERON:0007284!9.23e-09!86;UBERON:0000073!1.13e-08!94;UBERON:0001016!1.13e-08!94;UBERON:0003056!5.73e-08!61;UBERON:0002346!6.37e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;5.96e-16;2!UBERON:0003022;5.96e-16;2!UBERON:0002421;5.96e-16;2!UBERON:0002600;5.96e-16;2!UBERON:0002619;7.80e-15;22!UBERON:0000349;4.77e-14;5!UBERON:0002021;1.54e-13;5!UBERON:0000956;5.00e-13;25!UBERON:0000203;5.00e-13;25!UBERON:0002791;2.61e-09;32!UBERON:0001869;3.26e-09;32!UBERON:0001950;1.58e-08;20!UBERON:0003528;1.16e-07;34!UBERON:0002020;1.16e-07;34!UBERON:0002780;3.24e-07;41!UBERON:0001890;3.24e-07;41!UBERON:0001893;6.01e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.45e-16,2;UBERON:0003022,4.45e-16,2;UBERON:0002421,4.45e-16,2;UBERON:0002600,4.45e-16,2;UBERON:0002619,7.27e-15,22;UBERON:0000349,3.76e-14,5;UBERON:0002021,1.64e-13,5;UBERON:0002390,2.93e-13,98;UBERON:0003061,2.93e-13,98;UBERON:0000956,4.69e-13,25;UBERON:0000203,4.69e-13,25;UBERON:0002193,8.77e-12,108;UBERON:0002371,3.84e-11,76;UBERON:0001474,3.50e-10,82;UBERON:0002791,4.15e-10,32;UBERON:0001869,4.15e-10,32;UBERON:0003528,1.75e-09,34;UBERON:0002020,1.75e-09,34;UBERON:0001893,1.75e-09,34;UBERON:0004765,4.24e-09,90;UBERON:0002405,9.68e-09,93;UBERON:0001950,1.60e-08,20;UBERON:0001434,5.47e-08,100;UBERON:0002780,9.24e-08,41;UBERON:0001890,9.24e-08,41;UBERON:0003080,9.24e-08,41;UBERON:0006240,9.24e-08,41 | |||
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|short_description=p@chr10:11371311..11371330,+ | |||
}} | }} |
Latest revision as of 10:28, 23 July 2015
Short description: | p@chr10:11371311..11371330, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11371311..11371330, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.40e-16 | 48 |
phagocyte | 4.40e-16 | 48 |
leukocyte | 4.03e-15 | 136 |
nongranular leukocyte | 1.69e-14 | 115 |
myeloid leukocyte | 4.92e-14 | 72 |
myeloid lineage restricted progenitor cell | 3.98e-13 | 66 |
granulocyte monocyte progenitor cell | 6.67e-13 | 67 |
monopoietic cell | 1.75e-12 | 59 |
monocyte | 1.75e-12 | 59 |
monoblast | 1.75e-12 | 59 |
promonocyte | 1.75e-12 | 59 |
classical monocyte | 2.08e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-12 | 42 |
macrophage dendritic cell progenitor | 5.09e-12 | 61 |
hematopoietic lineage restricted progenitor cell | 5.41e-12 | 120 |
hematopoietic stem cell | 1.43e-11 | 168 |
hematopoietic cell | 8.40e-11 | 177 |
single nucleate cell | 1.87e-10 | 3 |
mononuclear cell | 1.87e-10 | 3 |
hematopoietic oligopotent progenitor cell | 2.00e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-09 | 161 |
myeloid cell | 1.30e-08 | 108 |
common myeloid progenitor | 1.30e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.45e-16 | 2 |
lobe parts of cerebral cortex | 4.45e-16 | 2 |
hippocampal formation | 4.45e-16 | 2 |
limbic lobe | 4.45e-16 | 2 |
regional part of cerebral cortex | 7.27e-15 | 22 |
limbic system | 3.76e-14 | 5 |
occipital lobe | 1.64e-13 | 5 |
hematopoietic system | 2.93e-13 | 98 |
blood island | 2.93e-13 | 98 |
cerebral cortex | 4.69e-13 | 25 |
pallium | 4.69e-13 | 25 |
hemolymphoid system | 8.77e-12 | 108 |
bone marrow | 3.84e-11 | 76 |
bone element | 3.50e-10 | 82 |
regional part of telencephalon | 4.15e-10 | 32 |
cerebral hemisphere | 4.15e-10 | 32 |
brain grey matter | 1.75e-09 | 34 |
gray matter | 1.75e-09 | 34 |
telencephalon | 1.75e-09 | 34 |
skeletal element | 4.24e-09 | 90 |
immune system | 9.68e-09 | 93 |
neocortex | 1.60e-08 | 20 |
skeletal system | 5.47e-08 | 100 |
regional part of forebrain | 9.24e-08 | 41 |
forebrain | 9.24e-08 | 41 |
anterior neural tube | 9.24e-08 | 41 |
future forebrain | 9.24e-08 | 41 |