FFCP PHASE1:Hg19::chr10:72645686..72645703,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:72645686..72645703,- to FFCP PHASE1:Hg19::chr10:72645686..72645703,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5092 | |EntrezGene=5092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8646 | |HGNC=8646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000493961_5end | |||
|cluster_id=chr10:72645686..72645703,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PCBD1_5end | |||
|id=chr10:72645686..72645703,- | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-15!254;CL:0002321!9.47e-08!248;CL:0000220!1.34e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.60e-14;10!CL:1000494;1.60e-14;10!CL:0000182;3.94e-11;12!CL:1000449;2.74e-09;15!CL:0002681;5.33e-09;12!CL:0002584;5.33e-09;12!CL:1000497;4.65e-08;17!CL:0002518;4.65e-08;17!CL:0000650;1.97e-07;2!CL:1000500;1.97e-07;2!CL:1000618;1.97e-07;2!CL:1001318;1.97e-07;2!CL:0002173;1.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.08e-14,10;CL:1000494,1.08e-14,10;CL:0000223,6.61e-12,58;CL:0000182,3.08e-11,12;CL:1000449,2.13e-09,15;CL:0002681,5.40e-09,12;CL:0002584,5.40e-09,12;CL:0000066,2.42e-08,253;CL:1000497,3.74e-08,17;CL:0002518,3.74e-08,17;CL:0000650,1.76e-07,2;CL:1000500,1.76e-07,2;CL:1000618,1.76e-07,2;CL:1001318,1.76e-07,2;CL:0002173,1.76e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.02e-16;11!UBERON:0009497;3.64e-13;13!UBERON:0003104;1.49e-10;31!UBERON:0001041;1.13e-07;30 | |||
|ontology_enrichment_disease=DOID:305!9.74e-12!106;DOID:0050687!2.86e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!7.35e-15!309;UBERON:0000119!1.98e-14!312;UBERON:0000481!4.40e-14!347;UBERON:0000922!1.04e-12!612;UBERON:0000490!8.04e-12!138;UBERON:0000923!2.20e-11!604;UBERON:0005291!2.20e-11!604;UBERON:0006598!2.20e-11!604;UBERON:0002532!2.20e-11!604;UBERON:0002050!3.37e-11!605;UBERON:0005423!3.37e-11!605;UBERON:0003104!4.17e-11!238;UBERON:0009142!4.17e-11!238;UBERON:0000468!8.47e-11!659;UBERON:0000467!1.43e-10!625;UBERON:0000480!2.16e-10!626;UBERON:0004921!4.66e-10!129;UBERON:0004185!4.66e-10!129;UBERON:0005177!4.27e-09!107;UBERON:0002100!4.87e-09!216;UBERON:0001007!1.01e-08!155;UBERON:0001555!1.01e-08!155;UBERON:0007026!1.01e-08!155;UBERON:0005911!1.26e-08!82;UBERON:0001048!2.00e-08!168;UBERON:0005172!2.26e-08!55;UBERON:0005173!2.26e-08!55;UBERON:0000477!2.42e-08!286;UBERON:0000926!2.87e-08!448;UBERON:0004120!2.87e-08!448;UBERON:0006603!2.87e-08!448;UBERON:0000475!4.32e-08!365;UBERON:0004119!6.51e-08!169;UBERON:0000925!6.51e-08!169;UBERON:0006595!6.51e-08!169;UBERON:0003914!8.99e-08!118;UBERON:0000077!1.06e-07!130;UBERON:0002417!1.97e-07!61;UBERON:0000916!1.97e-07!61;UBERON:0003929!2.02e-07!54;UBERON:0009569!2.57e-07!113;UBERON:0001041!2.86e-07!98;UBERON:0000062!5.79e-07!511;UBERON:0006554!6.11e-07!44;UBERON:0005256!8.75e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.60e-14;10!UBERON:0009773;1.60e-14;10!UBERON:0001231;1.60e-14;10!UBERON:0004810;1.60e-14;10!UBERON:0002107;7.76e-14;19!UBERON:0006925;7.76e-14;19!UBERON:0002423;4.25e-12;25!UBERON:0005172;2.30e-10;52!UBERON:0005173;2.30e-10;52!UBERON:0006555;2.74e-09;15!UBERON:0004819;2.74e-09;15!UBERON:0001285;2.74e-09;15!UBERON:0007684;2.74e-09;15!UBERON:0002365;3.72e-09;31!UBERON:0002330;3.72e-09;31!UBERON:0001225;5.33e-09;12!UBERON:0008987;5.33e-09;12!UBERON:0002368;5.55e-09;33!UBERON:0000949;9.67e-08;43!UBERON:0002417;1.90e-07;58!UBERON:0000916;1.90e-07;58!UBERON:0003567;1.97e-07;2!UBERON:0003838;1.97e-07;2!UBERON:0003586;1.97e-07;2!UBERON:0005169;1.97e-07;2!UBERON:0002321;1.97e-07;2!UBERON:0005215;1.97e-07;2!UBERON:0002303;1.97e-07;2!UBERON:0002319;1.97e-07;2!UBERON:0001851;4.92e-07;15!UBERON:0000353;4.92e-07;15!UBERON:0002113;5.23e-07;24!UBERON:0011143;5.23e-07;24 | |||
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| ||
|short_description=p3@PCBD1 | |||
}} | }} |
Latest revision as of 03:03, 19 September 2015
Short description: | p3@PCBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCBD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -30bp_to_ENST00000493961_5end |
EntrezGene: | PCBD1 |
HGNC: | 8646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.08e-14 | 10 |
nephron tubule epithelial cell | 1.08e-14 | 10 |
endodermal cell | 6.61e-12 | 58 |
hepatocyte | 3.08e-11 | 12 |
epithelial cell of nephron | 2.13e-09 | 15 |
kidney cortical cell | 5.40e-09 | 12 |
renal cortical epithelial cell | 5.40e-09 | 12 |
epithelial cell | 2.42e-08 | 253 |
kidney cell | 3.74e-08 | 17 |
kidney epithelial cell | 3.74e-08 | 17 |
mesangial cell | 1.76e-07 | 2 |
kidney interstitial cell | 1.76e-07 | 2 |
juxtaglomerular complex cell | 1.76e-07 | 2 |
renal interstitial pericyte | 1.76e-07 | 2 |
extraglomerular mesangial cell | 1.76e-07 | 2 |