FFCP PHASE1:Hg19::chr11:61584233..61584244,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61584233..61584244,- to FFCP PHASE1:Hg19::chr11:61584233..61584244,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |HGNC=3574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424501_5end | |||
|cluster_id=chr11:61584233..61584244,- | |||
|description=CAGE_peak_8_at_FADS1_5end | |||
|id=chr11:61584233..61584244,- | |||
|ontology_enrichment_celltype=CL:0000133!1.69e-12!59;CL:0002319!2.35e-11!25;CL:0000333!5.07e-11!41;CL:0000221!2.94e-10!71;CL:0002321!2.73e-08!248;CL:0000095!4.96e-08!17;CL:0000123!4.96e-08!17;CL:0000220!7.33e-08!246;CL:0000243!1.93e-07!15;CL:0000125!1.93e-07!15;CL:0000030!1.93e-07!15;CL:0000339!1.93e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.62e-14;25!CL:0000095;3.73e-09;17!CL:0000243;2.80e-08;15!CL:0000125;2.80e-08;15!CL:0000147;4.97e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.13e-15,59;CL:0002319,9.18e-14,25;CL:0000333,2.19e-13,41;CL:0000221,3.03e-10,72;CL:0000095,3.45e-09,17;CL:0000123,3.45e-09,17;CL:0000243,2.31e-08,15;CL:0000125,2.31e-08,15;CL:0000030,2.31e-08,15;CL:0000339,2.31e-08,15;CL:0000147,2.68e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000339;2.80e-08;15!CL:0000133;4.05e-08;59 | |||
|ontology_enrichment_disease=DOID:0050687!2.61e-08!143;DOID:162!1.48e-07!235;DOID:14566!2.46e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.12e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.79e-22!94;UBERON:0001016!5.79e-22!94;UBERON:0005743!2.30e-20!86;UBERON:0001017!3.55e-18!82;UBERON:0000924!3.47e-17!173;UBERON:0006601!3.47e-17!173;UBERON:0004121!1.47e-16!169;UBERON:0002346!1.10e-15!90;UBERON:0003075!4.11e-15!86;UBERON:0007284!4.11e-15!86;UBERON:0000955!9.53e-14!69;UBERON:0006238!9.53e-14!69;UBERON:0000033!1.34e-13!123;UBERON:0000119!1.53e-13!312;UBERON:0000483!1.29e-12!309;UBERON:0003056!7.41e-12!61;UBERON:0000153!1.40e-11!129;UBERON:0007811!1.40e-11!129;UBERON:0000475!6.40e-11!365;UBERON:0002616!1.11e-10!59;UBERON:0000481!1.76e-10!347;UBERON:0000064!5.02e-10!219;UBERON:0001049!6.15e-10!57;UBERON:0005068!6.15e-10!57;UBERON:0006241!6.15e-10!57;UBERON:0007135!6.15e-10!57;UBERON:0000477!4.82e-09!286;UBERON:0000922!1.05e-08!612;UBERON:0000025!3.15e-08!194;UBERON:0001893!4.95e-08!34;UBERON:0002020!7.96e-08!34;UBERON:0003528!7.96e-08!34;UBERON:0002791!1.13e-07!33;UBERON:0001869!1.32e-07!32;UBERON:0002050!1.59e-07!605;UBERON:0005423!1.59e-07!605;UBERON:0000970!2.16e-07!20;UBERON:0000923!2.21e-07!604;UBERON:0005291!2.21e-07!604;UBERON:0006598!2.21e-07!604;UBERON:0002532!2.21e-07!604;UBERON:0000019!3.20e-07!19;UBERON:0000047!3.20e-07!19;UBERON:0004088!3.20e-07!19;UBERON:0003072!3.20e-07!19;UBERON:0003071!3.20e-07!19;UBERON:0004128!3.20e-07!19;UBERON:0002780!4.74e-07!41;UBERON:0001890!4.74e-07!41;UBERON:0006240!4.74e-07!41;UBERON:0007625!8.80e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000970;5.19e-09;20!UBERON:0007625;7.34e-09;11!UBERON:0000019;9.90e-09;19!UBERON:0000047;9.90e-09;19!UBERON:0004088;9.90e-09;19!UBERON:0010230;9.90e-09;19!UBERON:0002104;2.67e-08;21!UBERON:0006876;8.41e-08;11!UBERON:0001456;2.25e-07;21!UBERON:0000020;4.38e-07;23!UBERON:0001017;4.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.44e-20,89;UBERON:0001017,4.67e-19,81;UBERON:0004121,9.73e-15,171;UBERON:0000924,9.73e-15,171;UBERON:0006601,9.73e-15,171;UBERON:0000955,1.46e-13,68;UBERON:0006238,1.46e-13,68;UBERON:0011216,3.89e-13,223;UBERON:0002346,2.77e-12,86;UBERON:0003075,2.85e-12,82;UBERON:0007284,2.85e-12,82;UBERON:0003056,4.39e-10,61;UBERON:0010314,1.65e-09,132;UBERON:0007625,7.30e-09,11;UBERON:0001049,1.59e-08,56;UBERON:0005068,1.59e-08,56;UBERON:0006241,1.59e-08,56;UBERON:0007135,1.59e-08,56;UBERON:0010371,2.48e-08,104;UBERON:0000119,2.65e-08,309;UBERON:0006876,3.27e-08,11;UBERON:0000970,3.41e-08,21;UBERON:0002104,3.41e-08,21;UBERON:0000019,6.12e-08,20;UBERON:0000047,6.12e-08,20;UBERON:0010312,6.12e-08,20;UBERON:0004088,6.12e-08,20;UBERON:0010230,6.12e-08,20;UBERON:0003072,6.12e-08,20;UBERON:0004128,6.12e-08,20;UBERON:0003071,6.12e-08,20;UBERON:0000483,1.83e-07,306;UBERON:0000073,3.56e-07,53;UBERON:0002616,3.56e-07,53;UBERON:0001456,9.77e-07,22 | |||
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|phase1_expression=1.45342703416445,1.71280419112787,1.12763523276777,2.00146596706261,1.34088328328186,0.872338524100369,0,1.89515962028049,0.522371256399677,1.22866968250754,0.697801167972428,0.218441372130172,0.263766978228454,0.866364470720326,0,0,0.602694528023977,1.46062018077475,0.487932798790507,4.80172126499473,3.4680117511523,1.25381888591235,3.14859585844162,2.73748850145768,4.01736446703369,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.852449501065388,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,1.00267582127178,0.144846518960824,1.5905718941022,0,5.0103453096956,2.4390233720882,3.07421749925941,1.0478326039817,0.728590576585084,0.741568885568859,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,1.78886166630035,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,1.00416183829401,1.61131726843659,1.52054421143703,0.24406205754817,1.10298924103761,0,0.982297011124877,1.12264686313085,1.46394924628319,0,0.949265659568129,0.916008719652036,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,1.06400514659507,0,0,0.49333509683432,1.8672662123986,0.942974704487816,0.490385709340376,8.47601594811616,1.72852777344,1.40592859100278,0,0,0.597794722207204,1.996386476944,1.45685649931318,1.40450806702248,0.816616685019573,1.59684612505298,1.13658359293342,1.18800285728205,0.247266929278557,1.82032272387605,0,2.18836948140286,1.87677779807946,2.49357703935765,0.438977620880838,0.919463387397059,1.20190447125277,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0.506328996723799,0,0.252433774244115,0.736399189138395,0.646584227275248,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.545492241181669,0.860413786167011,1.70763188581434,2.65059536642971,1.51052125730374,2.59152637538426,1.26160425437814,3.28479623168247,1.56449532329816,1.28648187638577,0,0,0.721879481669586,1.30137480043828,1.85443159085912,1.44606617930089,2.09558548191549,1.52515610864684,2.84724742933316,1.48314438976181,0.588664395376038,1.53898862778556,0.738155454624648,0,1.6462960453256,2.94017422771084,1.26755034821831,0,0,0.441463099414651,1.47586126251736,1.54411029268673,0.548751427043128,0,0.201057944823262,0.277765335475589,0,1.03993478527958,1.44331342025273,6.14431146367907,1.52631302506568,0.721832238805369,0,0.570762456703795,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,0.671928512795438,0.283550194484773,0.447792613514241,0,0,1.47798971368783,1.58487181223807,0.207328115540772,0.288239906833923,0.25248486685276,2.60341366597893,1.52795370223311,0,5.13217338068116,2.57068731758309,1.8020583470635,3.14409075893636,5.49442313292267,2.61576041299968,1.98013371716565,0.646358578788889,0,0.845302752556,0.797814349754612,1.04007436911366,2.57207374262142,0,1.3321108950805,3.28849385413739,0,2.46972101034231,1.62868092146868,0.710783897485092,0.791951872933429,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,3.44585807502342,0,0.434343920002738,0.61642896765115,0.537182889719687,0.112085143993527,0,0,0,4.31960861178188,2.60279707715243,2.31986643833309,2.01019518401218,1.27587750330633,0,0,0,0.36807447515742,2.00068208423871,0.813795071099207,0.623912584592421,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.921845842708516,0.260650843404249,11.1606659753762,3.43143423810856,0.206768026122887,0,0.106727557803444,0,0,0.604780586659361,0.744323423456331,0,0,0.896974044789907,0.511707249066704,0.804269605718038,0,0,0,0.0821271560138091,0,0,3.38406458856542,0.40101294060657,0,0.68888668898764,0.182091168006717,0.524497659837696,1.35359883872224,2.0794141018192,2.35304930753057,1.46139224653261,2.11103257785751,1.13733384070897,1.70093705276516,0.647747748306418,0,2.16757150035082,1.50506932156456,1.01950509218015,0.831076008928724,2.46262230194396,0,0,5.38545262744417,4.26419039409617,5.20605431462885,0.309123034943167,3.20493126864202,2.14524699793529,0.574265537996172,0.650060246036521,0,0.290012154876366,1.3864375540318,1.5350367472613,1.37836572484531,1.82614416276065,2.0302337147992,1.36362603865761,0.534192213880424,0.330569830721956,0.576570202095319,0.255225424989168,0.50578890427775,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.286249773483982,3.72158369359667,1.58189712359363,2.66882271493355,1.535386747868,0.855877976067841,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| ||
|short_description=p8@FADS1 | |||
}} | }} |
Latest revision as of 17:06, 18 September 2015
Short description: | p8@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424501_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.13e-15 | 59 |
neural cell | 9.18e-14 | 25 |
migratory neural crest cell | 2.19e-13 | 41 |
ectodermal cell | 3.03e-10 | 72 |
neuron associated cell | 3.45e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.45e-09 | 17 |
glial cell (sensu Vertebrata) | 2.31e-08 | 15 |
glial cell | 2.31e-08 | 15 |
glioblast | 2.31e-08 | 15 |
glioblast (sensu Vertebrata) | 2.31e-08 | 15 |
pigment cell | 2.68e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.44e-20 | 89 |
central nervous system | 4.67e-19 | 81 |
ectoderm-derived structure | 9.73e-15 | 171 |
ectoderm | 9.73e-15 | 171 |
presumptive ectoderm | 9.73e-15 | 171 |
brain | 1.46e-13 | 68 |
future brain | 1.46e-13 | 68 |
organ system subdivision | 3.89e-13 | 223 |
neurectoderm | 2.77e-12 | 86 |
neural plate | 2.85e-12 | 82 |
presumptive neural plate | 2.85e-12 | 82 |
pre-chordal neural plate | 4.39e-10 | 61 |
structure with developmental contribution from neural crest | 1.65e-09 | 132 |
pigment epithelium of eye | 7.30e-09 | 11 |
neural tube | 1.59e-08 | 56 |
neural rod | 1.59e-08 | 56 |
future spinal cord | 1.59e-08 | 56 |
neural keel | 1.59e-08 | 56 |
ecto-epithelium | 2.48e-08 | 104 |
cell layer | 2.65e-08 | 309 |
vasculature of organ | 3.27e-08 | 11 |
eye | 3.41e-08 | 21 |
visual system | 3.41e-08 | 21 |
camera-type eye | 6.12e-08 | 20 |
simple eye | 6.12e-08 | 20 |
immature eye | 6.12e-08 | 20 |
ocular region | 6.12e-08 | 20 |
eyeball of camera-type eye | 6.12e-08 | 20 |
optic cup | 6.12e-08 | 20 |
optic vesicle | 6.12e-08 | 20 |
eye primordium | 6.12e-08 | 20 |
epithelium | 1.83e-07 | 306 |
regional part of nervous system | 3.56e-07 | 53 |
regional part of brain | 3.56e-07 | 53 |
face | 9.77e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.12e-07 | 143 |