FFCP PHASE1:Hg19::chr12:57522399..57522436,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:57522399..57522436,+ to FFCP PHASE1:Hg19::chr12:57522399..57522436,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4035 | |EntrezGene=4035 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6692 | |HGNC=6692 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SW0 | |UniProt=Q86SW0 | ||
|association_with_transcript=-62bp_to_ENST00000338962_5end | |||
|cluster_id=chr12:57522399..57522436,+ | |||
|coexpression_cluster_id=C3304 | |||
|description=CAGE_peak_3_at_LRP1_5end | |||
|id=chr12:57522399..57522436,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.39e-23!180;CL:0000057!3.82e-15!75;CL:0000680!4.97e-10!57;CL:0000056!4.97e-10!57;CL:0000355!4.97e-10!57;CL:0000183!4.15e-09!59;CL:0000187!4.50e-09!54;CL:0000393!2.21e-08!60;CL:0000211!2.21e-08!60;CL:0000192!2.72e-07!42;CL:0000514!2.72e-07!42;CL:0000136!3.08e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000134;8.20e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.76e-16,76;CL:0000680,1.75e-10,58;CL:0000056,1.75e-10,58;CL:0000355,1.75e-10,58;CL:0000187,1.66e-09,55;CL:0000393,8.67e-09,61;CL:0000211,8.67e-09,61;CL:0000192,1.08e-07,43;CL:0000514,1.08e-07,43;CL:0000136,2.56e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.81e-20!659;UBERON:0000467!3.97e-14!625;UBERON:0000475!5.16e-14!365;UBERON:0000480!8.34e-14!626;UBERON:0000922!3.12e-13!612;UBERON:0000062!2.56e-12!511;UBERON:0000914!4.05e-12!83;UBERON:0002329!4.05e-12!83;UBERON:0003077!4.05e-12!83;UBERON:0003059!4.05e-12!83;UBERON:0007282!4.05e-12!83;UBERON:0009618!4.05e-12!83;UBERON:0007285!4.05e-12!83;UBERON:0002050!5.24e-12!605;UBERON:0005423!5.24e-12!605;UBERON:0000923!1.23e-11!604;UBERON:0005291!1.23e-11!604;UBERON:0006598!1.23e-11!604;UBERON:0002532!1.23e-11!604;UBERON:0004290!7.30e-11!70;UBERON:0002385!1.21e-10!63;UBERON:0001015!1.21e-10!63;UBERON:0000383!1.21e-10!63;UBERON:0001134!1.34e-10!61;UBERON:0002036!1.34e-10!61;UBERON:0003082!1.34e-10!61;UBERON:0000481!1.19e-09!347;UBERON:0000486!1.33e-09!82;UBERON:0007023!5.81e-09!115;UBERON:0002204!1.69e-08!167;UBERON:0005256!3.24e-08!143;UBERON:0003075!4.79e-08!86;UBERON:0007284!4.79e-08!86;UBERON:0000479!7.69e-08!787;UBERON:0002616!1.01e-07!59;UBERON:0002346!1.41e-07!90;UBERON:0001017!1.45e-07!82;UBERON:0005743!2.22e-07!86;UBERON:0001049!2.49e-07!57;UBERON:0005068!2.49e-07!57;UBERON:0006241!2.49e-07!57;UBERON:0007135!2.49e-07!57;UBERON:0000955!7.40e-07!69;UBERON:0006238!7.40e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.19e-12,73;UBERON:0000923,1.42e-11,560;UBERON:0010316,1.42e-11,560;UBERON:0005291,1.42e-11,560;UBERON:0006598,1.42e-11,560;UBERON:0010317,1.42e-11,560;UBERON:0002532,1.42e-11,560;UBERON:0002050,1.45e-11,564;UBERON:0003077,1.63e-11,72;UBERON:0007285,1.63e-11,72;UBERON:0002329,2.54e-11,71;UBERON:0003059,2.54e-11,71;UBERON:0007282,2.54e-11,71;UBERON:0004290,2.54e-11,71;UBERON:0009618,2.54e-11,71;UBERON:0010314,3.78e-11,132;UBERON:0002385,4.18e-11,64;UBERON:0001015,4.18e-11,64;UBERON:0000383,4.18e-11,64;UBERON:0001134,4.63e-11,62;UBERON:0002036,4.63e-11,62;UBERON:0003082,4.63e-11,62;UBERON:0000922,8.00e-11,592;UBERON:0002204,3.52e-10,167;UBERON:0000486,5.11e-10,83;UBERON:0005423,1.02e-09,581;UBERON:0000479,6.10e-09,773;UBERON:0007503,1.20e-08,78;UBERON:0007023,1.32e-08,114;UBERON:0000926,1.59e-08,315;UBERON:0004120,1.59e-08,315;UBERON:0006603,1.59e-08,315;UBERON:0003104,1.60e-08,160;UBERON:0009142,1.60e-08,160;UBERON:0005256,1.73e-08,122;UBERON:0003075,9.87e-08,82;UBERON:0007284,9.87e-08,82;UBERON:0001017,1.43e-07,81;UBERON:0001049,2.02e-07,56;UBERON:0005068,2.02e-07,56;UBERON:0006241,2.02e-07,56;UBERON:0007135,2.02e-07,56;UBERON:0002346,2.90e-07,86;UBERON:0000955,7.41e-07,68;UBERON:0006238,7.41e-07,68 | |||
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| ||
|short_description=p3@LRP1 | |||
}} | }} |
Latest revision as of 13:15, 19 September 2015
Short description: | p3@LRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRP1_5end |
Coexpression cluster: | C3304_Fibroblast_Smooth_Pericytes_Cardiac_Mesenchymal_Olfactory_Myoblast |
Association with transcript: | -62bp_to_ENST00000338962_5end |
EntrezGene: | LRP1 |
HGNC: | 6692 |
UniProt: | Q86SW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.76e-16 | 76 |
muscle precursor cell | 1.75e-10 | 58 |
myoblast | 1.75e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-10 | 58 |
muscle cell | 1.66e-09 | 55 |
electrically responsive cell | 8.67e-09 | 61 |
electrically active cell | 8.67e-09 | 61 |
smooth muscle cell | 1.08e-07 | 43 |
smooth muscle myoblast | 1.08e-07 | 43 |
fat cell | 2.56e-07 | 15 |