FFCP PHASE1:Hg19::chr12:80328905..80328946,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:80328905..80328946,- to FFCP PHASE1:Hg19::chr12:80328905..80328946,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4659 | |EntrezGene=4659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7618 | |HGNC=7618 | ||
|TSSclassifier=strong | |||
|UniProt=F8VZN8 | |UniProt=F8VZN8 | ||
|association_with_transcript=0bp_to_ENST00000547330_5end | |||
|cluster_id=chr12:80328905..80328946,- | |||
|description=CAGE_peak_3_at_PPP1R12A_5end | |||
|id=chr12:80328905..80328946,- | |||
|ontology_enrichment_celltype=CL:0000738!2.38e-38!140;CL:0002031!1.29e-32!124;CL:0002087!1.60e-30!119;CL:0000037!2.33e-28!172;CL:0000566!2.33e-28!172;CL:0002032!1.71e-26!165;CL:0000837!1.71e-26!165;CL:0000766!1.05e-25!76;CL:0000988!2.00e-23!182;CL:0000557!7.07e-23!71;CL:0000839!8.69e-22!70;CL:0002057!3.57e-21!42;CL:0000860!4.77e-21!45;CL:0002009!2.12e-20!65;CL:0002194!5.37e-20!63;CL:0000576!5.37e-20!63;CL:0000040!5.37e-20!63;CL:0000559!5.37e-20!63;CL:0000763!2.66e-16!112;CL:0000049!2.66e-16!112;CL:0000838!1.71e-10!52;CL:0000542!8.53e-10!53;CL:0000051!8.53e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.92e-18;33!CL:0002057;8.92e-18;33!CL:0000473;3.67e-14;39!CL:0000234;3.67e-14;39!CL:0000576;2.96e-13;48!CL:0000766;2.64e-11;69!CL:0002087;6.67e-10;104!CL:0000738;1.99e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.84e-38,136;CL:0002031,3.47e-32,120;CL:0002087,4.25e-30,115;CL:0000037,8.19e-28,168;CL:0002032,5.84e-26,161;CL:0000837,5.84e-26,161;CL:0000766,1.80e-25,72;CL:0000988,1.96e-23,177;CL:0000557,1.26e-22,67;CL:0000839,1.59e-21,66;CL:0000860,3.57e-21,42;CL:0002057,3.57e-21,42;CL:0002009,3.77e-20,61;CL:0002194,9.40e-20,59;CL:0000576,9.40e-20,59;CL:0000040,9.40e-20,59;CL:0000559,9.40e-20,59;CL:0000473,1.07e-19,48;CL:0000234,1.07e-19,48;CL:0000763,7.57e-16,108;CL:0000049,7.57e-16,108;CL:0000838,1.71e-10,52;CL:0000542,8.52e-10,53;CL:0000051,8.52e-10,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-24!102;UBERON:0003061!2.12e-24!102;UBERON:0002193!7.43e-21!112;UBERON:0007023!1.44e-20!115;UBERON:0002371!4.68e-19!80;UBERON:0001474!7.19e-17!86;UBERON:0004765!2.42e-15!101;UBERON:0001434!2.42e-15!101;UBERON:0002405!2.47e-11!115;UBERON:0003080!1.86e-09!42;UBERON:0002780!5.26e-09!41;UBERON:0001890!5.26e-09!41;UBERON:0006240!5.26e-09!41;UBERON:0001049!1.14e-08!57;UBERON:0005068!1.14e-08!57;UBERON:0006241!1.14e-08!57;UBERON:0007135!1.14e-08!57;UBERON:0001893!1.76e-08!34;UBERON:0001869!2.15e-08!32;UBERON:0002020!3.13e-08!34;UBERON:0003528!3.13e-08!34;UBERON:0002791!3.35e-08!33;UBERON:0000956!5.24e-07!25;UBERON:0000203!5.24e-07!25;UBERON:0002616!5.48e-07!59;UBERON:0002619!8.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.97e-08;32!UBERON:0002791;1.08e-07;32!UBERON:0001893;1.44e-07;34!UBERON:0003528;2.60e-07;34!UBERON:0002020;2.60e-07;34!UBERON:0002780;3.36e-07;41!UBERON:0001890;3.36e-07;41!UBERON:0000956;3.92e-07;25!UBERON:0000203;3.92e-07;25!UBERON:0002619;6.00e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.39e-24,98;UBERON:0003061,5.39e-24,98;UBERON:0002193,2.19e-20,108;UBERON:0007023,4.18e-20,114;UBERON:0002371,1.10e-18,76;UBERON:0002405,4.93e-17,93;UBERON:0001474,1.86e-16,82;UBERON:0004765,1.59e-14,90;UBERON:0001434,5.10e-14,100;UBERON:0002780,5.26e-09,41;UBERON:0001890,5.26e-09,41;UBERON:0003080,5.26e-09,41;UBERON:0006240,5.26e-09,41;UBERON:0001893,1.76e-08,34;UBERON:0001869,2.15e-08,32;UBERON:0000073,2.64e-08,53;UBERON:0002616,2.64e-08,53;UBERON:0001049,2.97e-08,56;UBERON:0005068,2.97e-08,56;UBERON:0006241,2.97e-08,56;UBERON:0007135,2.97e-08,56;UBERON:0003528,3.13e-08,34;UBERON:0002020,3.13e-08,34;UBERON:0002791,3.75e-08,32;UBERON:0000956,5.24e-07,25;UBERON:0000203,5.24e-07,25;UBERON:0002619,8.08e-07,22 | |||
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| ||
|short_description=p3@PPP1R12A | |||
}} | }} |
Latest revision as of 00:50, 25 September 2015
Short description: | p3@PPP1R12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R12A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547330_5end |
EntrezGene: | PPP1R12A |
HGNC: | 7618 |
UniProt: | F8VZN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.84e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 3.47e-32 | 120 |
nongranular leukocyte | 4.25e-30 | 115 |
hematopoietic stem cell | 8.19e-28 | 168 |
hematopoietic oligopotent progenitor cell | 5.84e-26 | 161 |
hematopoietic multipotent progenitor cell | 5.84e-26 | 161 |
myeloid leukocyte | 1.80e-25 | 72 |
hematopoietic cell | 1.96e-23 | 177 |
granulocyte monocyte progenitor cell | 1.26e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.59e-21 | 66 |
classical monocyte | 3.57e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-21 | 42 |
macrophage dendritic cell progenitor | 3.77e-20 | 61 |
monopoietic cell | 9.40e-20 | 59 |
monocyte | 9.40e-20 | 59 |
monoblast | 9.40e-20 | 59 |
promonocyte | 9.40e-20 | 59 |
defensive cell | 1.07e-19 | 48 |
phagocyte | 1.07e-19 | 48 |
myeloid cell | 7.57e-16 | 108 |
common myeloid progenitor | 7.57e-16 | 108 |
lymphoid lineage restricted progenitor cell | 1.71e-10 | 52 |
lymphocyte | 8.52e-10 | 53 |
common lymphoid progenitor | 8.52e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.39e-24 | 98 |
blood island | 5.39e-24 | 98 |
hemolymphoid system | 2.19e-20 | 108 |
adult organism | 4.18e-20 | 114 |
bone marrow | 1.10e-18 | 76 |
immune system | 4.93e-17 | 93 |
bone element | 1.86e-16 | 82 |
skeletal element | 1.59e-14 | 90 |
skeletal system | 5.10e-14 | 100 |
regional part of forebrain | 5.26e-09 | 41 |
forebrain | 5.26e-09 | 41 |
anterior neural tube | 5.26e-09 | 41 |
future forebrain | 5.26e-09 | 41 |
telencephalon | 1.76e-08 | 34 |
cerebral hemisphere | 2.15e-08 | 32 |
regional part of nervous system | 2.64e-08 | 53 |
regional part of brain | 2.64e-08 | 53 |
neural tube | 2.97e-08 | 56 |
neural rod | 2.97e-08 | 56 |
future spinal cord | 2.97e-08 | 56 |
neural keel | 2.97e-08 | 56 |
brain grey matter | 3.13e-08 | 34 |
gray matter | 3.13e-08 | 34 |
regional part of telencephalon | 3.75e-08 | 32 |
cerebral cortex | 5.24e-07 | 25 |
pallium | 5.24e-07 | 25 |
regional part of cerebral cortex | 8.08e-07 | 22 |