FFCP PHASE1:Hg19::chr16:30134524..30134589,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30134524..30134589,- to FFCP PHASE1:Hg19::chr16:30134524..30134589,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5595 | |EntrezGene=5595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6877 | |HGNC=6877 | ||
|TSSclassifier=strong | |||
|UniProt=P27361,E9PQW4 | |UniProt=P27361,E9PQW4 | ||
|association_with_transcript=0bp_to_ENST00000395199,ENST00000395202,ENST00000490298_5end | |||
|cluster_id=chr16:30134524..30134589,- | |||
|description=CAGE_peak_1_at_MAPK3_5end | |||
|id=chr16:30134524..30134589,- | |||
|ontology_enrichment_celltype=CL:0000222!1.41e-17!119;CL:0000115!2.38e-15!35;CL:0002078!4.05e-14!44;CL:0002139!1.82e-12!24;CL:0000183!1.86e-12!59;CL:0000055!5.50e-12!180;CL:0000192!1.21e-11!42;CL:0000514!1.21e-11!42;CL:0000680!5.61e-11!57;CL:0000056!5.61e-11!57;CL:0000355!5.61e-11!57;CL:0000071!1.46e-10!18;CL:0002546!1.46e-10!18;CL:0000187!1.99e-10!54;CL:0000359!1.22e-09!32;CL:0000393!9.86e-08!60;CL:0000211!9.86e-08!60;CL:0000213!1.82e-07!57;CL:0000215!1.82e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.02e-13;36!CL:0002139;1.68e-12;24!CL:0000071;1.41e-10;18!CL:0002078;3.94e-10;45!CL:0000359;3.74e-09;32!CL:0000192;5.15e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.13e-18,121;CL:0000115,8.12e-16,36;CL:0002078,1.43e-14,45;CL:0002139,1.82e-12,24;CL:0000192,1.00e-11,43;CL:0000514,1.00e-11,43;CL:0000680,4.40e-11,58;CL:0000056,4.40e-11,58;CL:0000355,4.40e-11,58;CL:0000071,1.46e-10,18;CL:0002546,1.46e-10,18;CL:0000187,1.56e-10,55;CL:0000359,1.22e-09,32;CL:0000393,7.64e-08,61;CL:0000211,7.64e-08,61;CL:0000213,8.16e-08,58;CL:0000215,8.16e-08,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.41e-10;18!CL:0000514;5.15e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.75e-23!79;UBERON:0007798!1.75e-23!79;UBERON:0001009!1.08e-22!113;UBERON:0004535!1.13e-22!110;UBERON:0000055!2.80e-21!69;UBERON:0004872!8.86e-21!84;UBERON:0000119!2.24e-20!312;UBERON:0004111!6.43e-20!241;UBERON:0000477!6.51e-20!286;UBERON:0000483!8.13e-20!309;UBERON:0000025!1.00e-19!194;UBERON:0001981!1.11e-18!60;UBERON:0007500!1.11e-18!60;UBERON:0004537!1.11e-18!60;UBERON:0006965!1.11e-18!60;UBERON:0003914!2.90e-16!118;UBERON:0001637!5.91e-14!42;UBERON:0003509!5.91e-14!42;UBERON:0004572!5.91e-14!42;UBERON:0000468!6.24e-14!659;UBERON:0000475!2.27e-13!365;UBERON:0000467!4.34e-13!625;UBERON:0000480!6.99e-13!626;UBERON:0007023!1.39e-11!115;UBERON:0004573!3.53e-11!33;UBERON:0004571!3.53e-11!33;UBERON:0000481!1.00e-10!347;UBERON:0000064!1.06e-10!219;UBERON:0001986!1.46e-10!18;UBERON:0004638!1.46e-10!18;UBERON:0004852!1.46e-10!18;UBERON:0002385!4.82e-10!63;UBERON:0001015!4.82e-10!63;UBERON:0000383!4.82e-10!63;UBERON:0004290!6.51e-10!70;UBERON:0000490!7.67e-10!138;UBERON:0001134!1.80e-09!61;UBERON:0002036!1.80e-09!61;UBERON:0003082!1.80e-09!61;UBERON:0000914!2.05e-09!83;UBERON:0002329!2.05e-09!83;UBERON:0003077!2.05e-09!83;UBERON:0003059!2.05e-09!83;UBERON:0007282!2.05e-09!83;UBERON:0009618!2.05e-09!83;UBERON:0007285!2.05e-09!83;UBERON:0000486!3.80e-09!82;UBERON:0006914!6.39e-09!25;UBERON:0000487!1.17e-08!22;UBERON:0002050!3.00e-08!605;UBERON:0005423!3.00e-08!605;UBERON:0000923!3.03e-08!604;UBERON:0005291!3.03e-08!604;UBERON:0006598!3.03e-08!604;UBERON:0002532!3.03e-08!604;UBERON:0005256!3.34e-08!143;UBERON:0003075!4.03e-08!86;UBERON:0007284!4.03e-08!86;UBERON:0002616!8.19e-08!59;UBERON:0000955!1.42e-07!69;UBERON:0006238!1.42e-07!69;UBERON:0000922!1.58e-07!612;UBERON:0000033!2.64e-07!123;UBERON:0000153!6.76e-07!129;UBERON:0007811!6.76e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;6.35e-11;56!UBERON:0001981;6.35e-11;56!UBERON:0004537;6.35e-11;56!UBERON:0000055;7.48e-11;65!UBERON:0004638;1.41e-10;18!UBERON:0001986;1.41e-10;18!UBERON:0004852;1.41e-10;18!UBERON:0001637;1.59e-10;42!UBERON:0003509;1.59e-10;42!UBERON:0004572;1.59e-10;42!UBERON:0004573;3.98e-10;33!UBERON:0004571;3.98e-10;33!UBERON:0002049;5.57e-10;75!UBERON:0007798;5.57e-10;75!UBERON:0003914;3.44e-09;74!UBERON:0006914;6.77e-09;25!UBERON:0000487;1.25e-08;22!UBERON:0004535;3.91e-07;109!UBERON:0001009;4.64e-07;112 | |||
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| ||
|short_description=p1@MAPK3 | |||
}} | }} |
Latest revision as of 06:48, 16 September 2015
Short description: | p1@MAPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAPK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395199, ENST00000395202, ENST00000490298_5end |
EntrezGene: | MAPK3 |
HGNC: | 6877 |
UniProt: | P27361E9PQW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.13e-18 | 121 |
endothelial cell | 8.12e-16 | 36 |
meso-epithelial cell | 1.43e-14 | 45 |
endothelial cell of vascular tree | 1.82e-12 | 24 |
smooth muscle cell | 1.00e-11 | 43 |
smooth muscle myoblast | 1.00e-11 | 43 |
muscle precursor cell | 4.40e-11 | 58 |
myoblast | 4.40e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.40e-11 | 58 |
blood vessel endothelial cell | 1.46e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.46e-10 | 18 |
muscle cell | 1.56e-10 | 55 |
vascular associated smooth muscle cell | 1.22e-09 | 32 |
electrically responsive cell | 7.64e-08 | 61 |
electrically active cell | 7.64e-08 | 61 |
lining cell | 8.16e-08 | 58 |
barrier cell | 8.16e-08 | 58 |