FFCP PHASE1:Hg19::chr22:18593382..18593391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51807 | |EntrezGene=51807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12410 | |HGNC=12410 | ||
|TSSclassifier=strong | |||
|UniProt=B3KPW9,Q9NY65 | |UniProt=B3KPW9,Q9NY65 | ||
|association_with_transcript=-61bp_to_ENST00000316027,NM_001193414,NM_018943_5end | |||
|cluster_id=chr22:18593382..18593391,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_TUBA8_5end | |||
|id=chr22:18593382..18593391,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.41e-09;3 | |||
|ontology_enrichment_disease=DOID:114!5.24e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.07e-13;2!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-13,2;DOID:1287,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-52!115;UBERON:0001049!1.36e-35!57;UBERON:0005068!1.36e-35!57;UBERON:0006241!1.36e-35!57;UBERON:0007135!1.36e-35!57;UBERON:0002780!6.38e-35!41;UBERON:0001890!6.38e-35!41;UBERON:0006240!6.38e-35!41;UBERON:0002616!3.91e-34!59;UBERON:0003080!5.97e-34!42;UBERON:0001893!5.36e-33!34;UBERON:0002020!5.65e-33!34;UBERON:0003528!5.65e-33!34;UBERON:0000955!2.31e-32!69;UBERON:0006238!2.31e-32!69;UBERON:0001869!4.18e-32!32;UBERON:0005743!5.18e-32!86;UBERON:0001017!6.04e-32!82;UBERON:0002791!1.02e-30!33;UBERON:0002619!1.68e-30!22;UBERON:0003075!2.72e-30!86;UBERON:0007284!2.72e-30!86;UBERON:0001950!6.93e-30!20;UBERON:0002346!1.50e-28!90;UBERON:0000073!3.74e-28!94;UBERON:0001016!3.74e-28!94;UBERON:0000956!1.79e-26!25;UBERON:0000203!1.79e-26!25;UBERON:0003056!2.08e-23!61;UBERON:0000153!2.75e-21!129;UBERON:0007811!2.75e-21!129;UBERON:0000033!2.89e-21!123;UBERON:0004121!3.32e-18!169;UBERON:0000200!6.50e-18!6;UBERON:0000924!1.49e-17!173;UBERON:0006601!1.49e-17!173;UBERON:0000025!3.65e-11!194;UBERON:0002021!1.44e-10!5;UBERON:0002771!2.04e-09!3;UBERON:0004111!2.91e-09!241;UBERON:0001871!2.99e-09!7;UBERON:0000988!7.32e-09!3;UBERON:0000477!4.16e-08!286;UBERON:0002308!5.44e-08!9;UBERON:0000125!5.44e-08!9;UBERON:0001870!1.76e-07!2;UBERON:0000483!2.12e-07!309;UBERON:0000369!2.28e-07!4;UBERON:0002435!2.28e-07!4;UBERON:0000204!2.28e-07!4;UBERON:0010082!2.28e-07!4;UBERON:0000119!3.10e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;5.92e-26;1!UBERON:0009899;5.92e-26;1!UBERON:0002021;9.92e-21;5!UBERON:0001950;2.94e-19;20!UBERON:0002619;1.25e-17;22!UBERON:0000956;1.17e-15;25!UBERON:0000203;1.17e-15;25!UBERON:0001893;1.57e-12;34!UBERON:0002791;3.87e-12;32!UBERON:0003528;4.96e-11;34!UBERON:0002020;4.96e-11;34!UBERON:0001869;4.96e-11;32!UBERON:0002780;4.92e-08;41!UBERON:0001890;4.92e-08;41!UBERON:0000955;6.63e-08;68!UBERON:0000073;9.27e-07;53!UBERON:0002616;9.27e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,2.78e-26,1;UBERON:0009899,2.78e-26,1;UBERON:0002021,7.35e-21,5;UBERON:0001950,2.81e-19,20;UBERON:0002619,1.19e-17,22;UBERON:0000956,1.13e-15,25;UBERON:0000203,1.13e-15,25;UBERON:0007023,6.68e-14,114;UBERON:0000955,6.83e-13,68;UBERON:0006238,6.83e-13,68;UBERON:0002791,1.88e-12,32;UBERON:0001869,1.88e-12,32;UBERON:0003528,9.10e-12,34;UBERON:0002020,9.10e-12,34;UBERON:0001893,9.10e-12,34;UBERON:0000073,9.86e-12,53;UBERON:0002616,9.86e-12,53;UBERON:0001049,3.97e-11,56;UBERON:0005068,3.97e-11,56;UBERON:0006241,3.97e-11,56;UBERON:0007135,3.97e-11,56;UBERON:0001017,6.88e-11,81;UBERON:0002780,7.06e-10,41;UBERON:0001890,7.06e-10,41;UBERON:0003080,7.06e-10,41;UBERON:0006240,7.06e-10,41;UBERON:0001016,7.88e-10,89;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0002346,2.36e-07,86;UBERON:0003056,8.26e-07,61 | |||
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| ||
|short_description=p12@TUBA8 | |||
}} | }} |
Latest revision as of 02:06, 19 September 2015
Short description: | p12@TUBA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TUBA8_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -61bp_to_ENST00000316027, NM_001193414, NM_018943_5end |
EntrezGene: | TUBA8 |
HGNC: | 12410 |
UniProt: | B3KPW9Q9NY65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.78e-26 | 1 |
pole of cerebral hemisphere | 2.78e-26 | 1 |
occipital lobe | 7.35e-21 | 5 |
neocortex | 2.81e-19 | 20 |
regional part of cerebral cortex | 1.19e-17 | 22 |
cerebral cortex | 1.13e-15 | 25 |
pallium | 1.13e-15 | 25 |
adult organism | 6.68e-14 | 114 |
brain | 6.83e-13 | 68 |
future brain | 6.83e-13 | 68 |
regional part of telencephalon | 1.88e-12 | 32 |
cerebral hemisphere | 1.88e-12 | 32 |
brain grey matter | 9.10e-12 | 34 |
gray matter | 9.10e-12 | 34 |
telencephalon | 9.10e-12 | 34 |
regional part of nervous system | 9.86e-12 | 53 |
regional part of brain | 9.86e-12 | 53 |
neural tube | 3.97e-11 | 56 |
neural rod | 3.97e-11 | 56 |
future spinal cord | 3.97e-11 | 56 |
neural keel | 3.97e-11 | 56 |
central nervous system | 6.88e-11 | 81 |
regional part of forebrain | 7.06e-10 | 41 |
forebrain | 7.06e-10 | 41 |
anterior neural tube | 7.06e-10 | 41 |
future forebrain | 7.06e-10 | 41 |
nervous system | 7.88e-10 | 89 |
neural plate | 1.06e-07 | 82 |
presumptive neural plate | 1.06e-07 | 82 |
neurectoderm | 2.36e-07 | 86 |
pre-chordal neural plate | 8.26e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-13 | 2 |
cardiovascular system disease | 1.80e-07 | 4 |