FFCP PHASE1:Hg19::chr2:26785409..26785477,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:26785409..26785477,+ to FFCP PHASE1:Hg19::chr2:26785409..26785477,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339778 | |EntrezGene=339778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27938 | |HGNC=27938 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJV1,B8ZZ55 | |UniProt=A6NJV1,B8ZZ55 | ||
|association_with_transcript=0bp_to_ENST00000329615,ENST00000409392_5end | |||
|cluster_id=chr2:26785409..26785477,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_C2orf70_5end | |||
|id=chr2:26785409..26785477,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.21e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.94e-08;29 | |||
|ontology_enrichment_disease=DOID:305!3.72e-13!106;DOID:0050687!3.73e-10!143;DOID:0050615!2.05e-07!16;DOID:1749!2.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;5.22e-09;14!DOID:1749;1.16e-08;14!DOID:0050615;3.04e-07;16!DOID:4362;8.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.90e-12,106;DOID:3119,4.85e-09,14;DOID:0050687,4.95e-09,143;DOID:1749,1.18e-08,14;DOID:0050615,3.31e-07,16;DOID:4362,8.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.50e-25!115;UBERON:0001049!4.40e-21!57;UBERON:0005068!4.40e-21!57;UBERON:0006241!4.40e-21!57;UBERON:0007135!4.40e-21!57;UBERON:0001017!6.62e-17!82;UBERON:0002780!7.25e-17!41;UBERON:0001890!7.25e-17!41;UBERON:0006240!7.25e-17!41;UBERON:0002616!1.90e-16!59;UBERON:0000955!3.07e-16!69;UBERON:0006238!3.07e-16!69;UBERON:0003080!3.44e-16!42;UBERON:0005743!3.94e-16!86;UBERON:0000073!7.40e-15!94;UBERON:0001016!7.40e-15!94;UBERON:0002020!1.65e-12!34;UBERON:0003528!1.65e-12!34;UBERON:0003075!2.94e-12!86;UBERON:0007284!2.94e-12!86;UBERON:0001893!3.87e-12!34;UBERON:0004111!7.41e-12!241;UBERON:0002791!8.17e-12!33;UBERON:0000025!9.90e-12!194;UBERON:0002346!1.31e-11!90;UBERON:0001869!5.09e-11!32;UBERON:0000481!1.19e-09!347;UBERON:0000153!1.89e-09!129;UBERON:0007811!1.89e-09!129;UBERON:0004121!2.78e-09!169;UBERON:0003056!3.50e-09!61;UBERON:0000033!4.89e-09!123;UBERON:0000477!5.23e-09!286;UBERON:0000924!5.37e-09!173;UBERON:0006601!5.37e-09!173;UBERON:0000956!1.41e-08!25;UBERON:0000203!1.41e-08!25;UBERON:0002619!1.88e-08!22;UBERON:0000062!2.00e-08!511;UBERON:0000483!9.59e-08!309;UBERON:0000475!1.21e-07!365;UBERON:0000119!2.03e-07!312;UBERON:0001950!2.60e-07!20;UBERON:0000464!2.85e-07!104;UBERON:0005177!2.99e-07!107;UBERON:0001894!9.19e-07!7;UBERON:0006222!9.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.39e-08;6!UBERON:0005409;2.56e-08;22!UBERON:0003296;2.91e-08;4!UBERON:0010133;2.91e-08;4!UBERON:0000945;1.91e-07;5!UBERON:0010039;1.91e-07;5!UBERON:0002048;2.02e-07;22!UBERON:0000117;2.02e-07;22!UBERON:0000171;2.02e-07;22!UBERON:0000170;2.02e-07;22!UBERON:0001896;5.54e-07;3!UBERON:0005290;5.54e-07;3!UBERON:0006947;7.67e-07;3!UBERON:0004054;7.67e-07;3!UBERON:0001894;9.01e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-10,114;UBERON:0011216,6.94e-10,223;UBERON:0001049,1.17e-08,56;UBERON:0005068,1.17e-08,56;UBERON:0006241,1.17e-08,56;UBERON:0007135,1.17e-08,56;UBERON:0002298,1.39e-08,6;UBERON:0003296,1.99e-08,4;UBERON:0010133,1.99e-08,4;UBERON:0002048,2.01e-07,22;UBERON:0000117,2.01e-07,22;UBERON:0000171,2.01e-07,22;UBERON:0000170,2.01e-07,22;UBERON:0005597,2.01e-07,22;UBERON:0000118,2.01e-07,22;UBERON:0000073,2.02e-07,53;UBERON:0002616,2.02e-07,53;UBERON:0005409,4.61e-07,25;UBERON:0001896,5.17e-07,3;UBERON:0005290,5.17e-07,3;UBERON:0010096,5.17e-07,3;UBERON:0005181,5.36e-07,35;UBERON:0001894,6.89e-07,7;UBERON:0006222,6.89e-07,7;UBERON:0006947,9.13e-07,3;UBERON:0004054,9.13e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0,0,0,19.9088194756523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.898117490504679,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0.447792613514241,0.290633938513962,2.68367875415648,0,0,2.90259361757081,2.16179930125442,0.50496973370552,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,2.70719767744447,0.462092022626489,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0.895499018888713,0,0,0.512900250232778,0,0,0.309123034943167,1.28197250745681,0.660075999364704,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,1.39473591775749,0,25.9490730289904,0,0,0,2.24670877868317,0.179021174675609,0,0,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0,0,6.37243310398798,0.254253650292766,0,23.4425493804196,0,0,7.08593108651071,2.77371808838438,0,0.110579259931225,0.295547618953547,0.219385397153973,1.19832309870889,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,3.59112177950125,0.141353071433941,0,2.98578579323551,0,1.22206028986725,0,0,0,3.50485891499521,1.60515529459758,1.40558667435203,0,2.93496928398135,0.242780379534093,2.76209081994573,10.8891644443797,2.44858209304392,0,0.150323419414493,0,0,0,0,0,0,0,0,0.587954384486266,2.69883540399248,6.11543338847105,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.126621591911757,10.1686719022098,0.400794101257669,0.85381197895741,2.99714414373195,5.76361668616424,0,8.57974989309823,1.00838358591705,0.372757606696298,0.707082103850386,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,1.33902874465124,0.335917362433631,0,0,0,0,0,0.984274815147488,0,0.795229689809303,1.36203406111576,0,0,0,0,0,1.03274246318642,0,0.945668487590378,2.93745693555989,0.105600336519406,4.30289614398828,3.83830394638891,0,2.64836788146173,0,0,0,0,0,0,0,4.64579575232515,0,0,3.36135686540031,2.6446520348538,0.171086837884329,6.34333520085005,1.38823636338003,8.48903247538196,1.65695622138878,0,0,0,0.638341257770182,0,0,0,0,3.45519011750515,0,0.488105059607853,0.751145584238999,8.027728739661,6.32295593760058,1.55241007353459,0,1.49976489554528,0.606596470166591,2.56918800190471,0.235265819698172,35.1251179355161,11.3038402316444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.428883182749851,0,0,0.231522474323834,0.734210113519403,0,0.926404341482917,0.219284049578707,0.176689145945881,0,0,0,0.345430341731199,0,0.414775308455192,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0,0,0.127894371303652,0.431299245586727,0,0.109209638192014,0.169732529954025,0,0,0,0,0.0788617450012534,3.20228299314188,0,0,0.963438376446893,0,0.478901577171454,0,0.504143392443436,0.207471757392654,0.968853873791107,0,4.02405645854205,0,0,6.3539116382686,0,2.0710797781803,0.994581110581374,3.1588337906688,0,4.68908406739856,0,0.818859587550484,2.51355346568977,0.202612753855184,0,0.413373593002368,0.253663240775627,2.7348740450911,0.548257766857182,0,0,0.511049710558381,1.60710550763486,5.04425583328236,6.67662164660295,1.59363533945908,0,0,0,0.135939465953663,0.131545547125698,0.118193840883968,0,0.627944742804112,0.157115589916002,0,6.39211104356647,0.431855182437243,1.9110067515482,0,0,0,0,0,0,0,0,2.15113679410139,0,0,2.11693525095465,1.60374807980835,0,0,0,19.4337462558181,1.70685094975177,0,0.102662806856247,0,0.971421986118279,3.74303141539369,6.16747403000242,0.118920090777569,1.1294608203896,0.879524133963433,5.73658805553359,0.154348316215889,1.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| ||
|short_description=p1@C2orf70 | |||
}} | }} |
Latest revision as of 15:12, 16 September 2015
Short description: | p1@C2orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C2orf70_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000329615, ENST00000409392_5end |
EntrezGene: | C2orf70 |
HGNC: | 27938 |
UniProt: | A6NJV1B8ZZ55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-10 | 114 |
organ system subdivision | 6.94e-10 | 223 |
neural tube | 1.17e-08 | 56 |
neural rod | 1.17e-08 | 56 |
future spinal cord | 1.17e-08 | 56 |
neural keel | 1.17e-08 | 56 |
brainstem | 1.39e-08 | 6 |
gland of diencephalon | 1.99e-08 | 4 |
neuroendocrine gland | 1.99e-08 | 4 |
lung | 2.01e-07 | 22 |
respiratory tube | 2.01e-07 | 22 |
respiration organ | 2.01e-07 | 22 |
pair of lungs | 2.01e-07 | 22 |
lung primordium | 2.01e-07 | 22 |
lung bud | 2.01e-07 | 22 |
regional part of nervous system | 2.02e-07 | 53 |
regional part of brain | 2.02e-07 | 53 |
gastrointestinal system | 4.61e-07 | 25 |
medulla oblongata | 5.17e-07 | 3 |
myelencephalon | 5.17e-07 | 3 |
future myelencephalon | 5.17e-07 | 3 |
thoracic segment organ | 5.36e-07 | 35 |
diencephalon | 6.89e-07 | 7 |
future diencephalon | 6.89e-07 | 7 |
male genital duct | 9.13e-07 | 3 |
internal male genitalia | 9.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.90e-12 | 106 |
gastrointestinal system cancer | 4.85e-09 | 14 |
cell type cancer | 4.95e-09 | 143 |
squamous cell carcinoma | 1.18e-08 | 14 |
respiratory system cancer | 3.31e-07 | 16 |
cervical cancer | 8.76e-07 | 5 |