FFCP PHASE1:Hg19::chr3:134204881..134204913,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:134204881..134204913,+ to FFCP PHASE1:Hg19::chr3:134204881..134204913,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80254 | |EntrezGene=80254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25815 | |HGNC=25815 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MT8,D6RAY6 | |UniProt=Q96MT8,D6RAY6 | ||
|association_with_transcript=0bp_to_ENST00000337090,ENST00000383229,ENST00000504013,ENST00000511574,ENST00000514412,NM_001042400,uc003eqn.1_5end | |||
|cluster_id=chr3:134204881..134204913,+ | |||
|description=CAGE_peak_3_at_CEP63_5end | |||
|id=chr3:134204881..134204913,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-45!115;UBERON:0001049!4.47e-19!57;UBERON:0005068!4.47e-19!57;UBERON:0006241!4.47e-19!57;UBERON:0007135!4.47e-19!57;UBERON:0003080!1.12e-16!42;UBERON:0002616!1.32e-16!59;UBERON:0002780!3.34e-16!41;UBERON:0001890!3.34e-16!41;UBERON:0006240!3.34e-16!41;UBERON:0000955!5.28e-14!69;UBERON:0006238!5.28e-14!69;UBERON:0002020!7.47e-13!34;UBERON:0003528!7.47e-13!34;UBERON:0001017!1.30e-12!82;UBERON:0001893!2.09e-12!34;UBERON:0002791!3.31e-12!33;UBERON:0005743!5.65e-12!86;UBERON:0001869!1.71e-11!32;UBERON:0000073!9.29e-11!94;UBERON:0001016!9.29e-11!94;UBERON:0002346!9.88e-11!90;UBERON:0003075!2.72e-10!86;UBERON:0007284!2.72e-10!86;UBERON:0002619!3.54e-10!22;UBERON:0000153!3.09e-09!129;UBERON:0007811!3.09e-09!129;UBERON:0001950!4.07e-09!20;UBERON:0000956!1.48e-08!25;UBERON:0000203!1.48e-08!25;UBERON:0000033!2.85e-08!123;UBERON:0003056!7.07e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.23e-12;114!UBERON:0002780;3.98e-12;41!UBERON:0001890;3.98e-12;41!UBERON:0003528;4.74e-11;34!UBERON:0002020;4.74e-11;34!UBERON:0000073;5.22e-11;53!UBERON:0002616;5.22e-11;53!UBERON:0002791;7.50e-11;32!UBERON:0001893;1.11e-10;34!UBERON:0002619;1.52e-10;22!UBERON:0001869;1.72e-10;32!UBERON:0001950;1.86e-09;20!UBERON:0000956;1.32e-08;25!UBERON:0000203;1.32e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-44,114;UBERON:0001049,1.12e-18,56;UBERON:0005068,1.12e-18,56;UBERON:0006241,1.12e-18,56;UBERON:0007135,1.12e-18,56;UBERON:0000073,1.07e-17,53;UBERON:0002616,1.07e-17,53;UBERON:0002780,3.01e-16,41;UBERON:0001890,3.01e-16,41;UBERON:0003080,3.01e-16,41;UBERON:0006240,3.01e-16,41;UBERON:0000955,1.11e-13,68;UBERON:0006238,1.11e-13,68;UBERON:0003528,6.89e-13,34;UBERON:0002020,6.89e-13,34;UBERON:0001893,1.94e-12,34;UBERON:0001017,2.98e-12,81;UBERON:0002791,7.00e-12,32;UBERON:0001869,1.59e-11,32;UBERON:0001016,7.03e-11,89;UBERON:0002346,1.52e-10,86;UBERON:0002619,3.33e-10,22;UBERON:0003075,4.18e-10,82;UBERON:0007284,4.18e-10,82;UBERON:0001950,3.85e-09,20;UBERON:0000956,1.41e-08,25;UBERON:0000203,1.41e-08,25;UBERON:0011216,2.76e-08,223;UBERON:0003056,6.59e-08,61 | |||
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| ||
|short_description=p3@CEP63 | |||
}} | }} |
Latest revision as of 22:47, 24 September 2015
Short description: | p3@CEP63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CEP63_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337090, ENST00000383229, ENST00000504013, ENST00000511574, ENST00000514412, NM_001042400, uc003eqn.1_5end |
EntrezGene: | CEP63 |
HGNC: | 25815 |
UniProt: | Q96MT8D6RAY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-44 | 114 |
neural tube | 1.12e-18 | 56 |
neural rod | 1.12e-18 | 56 |
future spinal cord | 1.12e-18 | 56 |
neural keel | 1.12e-18 | 56 |
regional part of nervous system | 1.07e-17 | 53 |
regional part of brain | 1.07e-17 | 53 |
regional part of forebrain | 3.01e-16 | 41 |
forebrain | 3.01e-16 | 41 |
anterior neural tube | 3.01e-16 | 41 |
future forebrain | 3.01e-16 | 41 |
brain | 1.11e-13 | 68 |
future brain | 1.11e-13 | 68 |
brain grey matter | 6.89e-13 | 34 |
gray matter | 6.89e-13 | 34 |
telencephalon | 1.94e-12 | 34 |
central nervous system | 2.98e-12 | 81 |
regional part of telencephalon | 7.00e-12 | 32 |
cerebral hemisphere | 1.59e-11 | 32 |
nervous system | 7.03e-11 | 89 |
neurectoderm | 1.52e-10 | 86 |
regional part of cerebral cortex | 3.33e-10 | 22 |
neural plate | 4.18e-10 | 82 |
presumptive neural plate | 4.18e-10 | 82 |
neocortex | 3.85e-09 | 20 |
cerebral cortex | 1.41e-08 | 25 |
pallium | 1.41e-08 | 25 |
organ system subdivision | 2.76e-08 | 223 |
pre-chordal neural plate | 6.59e-08 | 61 |