FFCP PHASE1:Hg19::chr3:13921594..13921601,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:13921594..13921601,- to FFCP PHASE1:Hg19::chr3:13921594..13921601,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7476 | |EntrezGene=7476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12786 | |HGNC=12786 | ||
|TSSclassifier=strong | |||
|UniProt=O00755 | |UniProt=O00755 | ||
|association_with_transcript=16bp_to_ENST00000285018,NM_004625,uc003bye.1_5end | |||
|cluster_id=chr3:13921594..13921601,- | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_4_at_WNT7A_5end | |||
|id=chr3:13921594..13921601,- | |||
|ontology_enrichment_celltype=CL:0002076!4.29e-19!43;CL:0000066!9.87e-18!254;CL:0000223!9.36e-15!59;CL:0002159!8.05e-13!13;CL:0002368!5.16e-10!13;CL:0000244!1.60e-07!4;CL:0000731!1.60e-07!4;CL:0000039!3.38e-07!7;CL:0000586!3.38e-07!7;CL:1000507!6.90e-07!12;CL:1000494!6.90e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.50e-21;14!CL:0000244;2.13e-17;4!CL:0000731;2.13e-17;4!CL:0002076;1.57e-13;42!CL:0002621;3.92e-13;3!CL:0000307;2.35e-12;3!CL:0000362;1.07e-10;9!CL:0000240;2.14e-10;6!CL:0000311;2.14e-10;6!CL:0000079;2.14e-10;6!CL:0000237;2.14e-10;6!CL:0002368;3.11e-10;13!CL:1000507;1.36e-09;10!CL:1000494;1.36e-09;10!CL:0000575;4.41e-09;2!CL:0000317;4.87e-09;2!CL:1000448;4.87e-09;2!CL:0002308;4.87e-09;2!CL:0002140;4.87e-09;2!CL:1000449;7.16e-09;15!CL:0002681;4.62e-08;12!CL:0002584;4.62e-08;12!CL:1000497;9.46e-08;17!CL:0002518;9.46e-08;17!CL:0000312;1.80e-07;5!CL:0002202;3.27e-07;9!CL:0002632;3.27e-07;9!CL:0002077;3.55e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.74e-21,14;CL:0000066,1.47e-19,253;CL:0002076,1.23e-17,42;CL:0000244,2.33e-17,4;CL:0000731,2.33e-17,4;CL:0000223,1.41e-13,58;CL:0002621,3.64e-13,3;CL:0000068,1.66e-12,3;CL:0000069,1.66e-12,3;CL:0000307,1.66e-12,3;CL:0000377,1.66e-12,3;CL:0000362,1.47e-10,9;CL:0000240,1.90e-10,6;CL:0000311,1.90e-10,6;CL:0000079,1.90e-10,6;CL:0000237,1.90e-10,6;CL:0000036,1.90e-10,6;CL:0000357,1.90e-10,6;CL:0000114,1.90e-10,6;CL:0002368,2.82e-10,13;CL:1000507,1.85e-09,10;CL:1000494,1.85e-09,10;CL:0000575,4.08e-09,2;CL:0000317,6.33e-09,2;CL:1000448,6.33e-09,2;CL:0002308,6.33e-09,2;CL:0002140,6.33e-09,2;CL:1000449,9.46e-09,15;CL:0002681,5.61e-08,12;CL:0002584,5.61e-08,12;CL:0002077,1.03e-07,34;CL:1000497,1.20e-07,17;CL:0002518,1.20e-07,17;CL:0000312,2.18e-07,5;CL:0002202,2.82e-07,9;CL:0002632,2.82e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;2.35e-12;3!CL:0000357;2.14e-10;6!CL:0000114;2.14e-10;6!CL:0000223;1.22e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!4.49e-11!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!5.61e-09!5;UBERON:0004121!2.99e-08!169;UBERON:0001049!5.47e-08!57;UBERON:0005068!5.47e-08!57;UBERON:0006241!5.47e-08!57;UBERON:0007135!5.47e-08!57;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0000464!1.34e-07!104;UBERON:0000064!2.32e-07!219;UBERON:0005910!2.50e-07!6;UBERON:0009773!6.90e-07!12;UBERON:0001231!6.90e-07!12;UBERON:0004810!6.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.01e-21;12!UBERON:0000365;3.37e-21;5!UBERON:0005910;1.30e-17;6!UBERON:0006554;4.13e-14;30!UBERON:0001008;4.13e-14;30!UBERON:0001949;3.92e-13;3!UBERON:0004211;1.36e-09;10!UBERON:0009773;1.36e-09;10!UBERON:0001231;1.36e-09;10!UBERON:0004810;1.36e-09;10!UBERON:0002419;4.87e-09;2!UBERON:0007771;4.87e-09;2!UBERON:0003297;4.87e-09;2!UBERON:0001821;4.87e-09;2!UBERON:0003487;4.87e-09;2!UBERON:0001820;4.87e-09;2!UBERON:0006555;7.16e-09;15!UBERON:0004819;7.16e-09;15!UBERON:0001285;7.16e-09;15!UBERON:0007684;7.16e-09;15!UBERON:0003350;1.75e-08;8!UBERON:0001225;4.62e-08;12!UBERON:0008987;4.62e-08;12!UBERON:0010371;6.58e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.27e-21,5;UBERON:0005910,1.26e-17,6;UBERON:0006554,2.37e-13,47;UBERON:0001949,3.64e-13,3;UBERON:0001008,5.24e-13,48;UBERON:0004810,1.85e-09,10;UBERON:0002419,6.33e-09,2;UBERON:0007771,6.33e-09,2;UBERON:0003297,6.33e-09,2;UBERON:0001821,6.33e-09,2;UBERON:0003487,6.33e-09,2;UBERON:0001820,6.33e-09,2;UBERON:0005089,6.33e-09,2;UBERON:0005088,6.33e-09,2;UBERON:0004211,9.46e-09,15;UBERON:0009773,9.46e-09,15;UBERON:0001231,9.46e-09,15;UBERON:0001285,9.46e-09,15;UBERON:0007684,9.46e-09,15;UBERON:0004208,9.46e-09,15;UBERON:0003350,1.59e-08,8;UBERON:0006555,3.66e-08,16;UBERON:0004819,3.66e-08,16;UBERON:0001225,5.61e-08,12;UBERON:0008987,5.61e-08,12 | |||
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| ||
|short_description=p4@WNT7A | |||
}} | }} |
Latest revision as of 01:59, 25 September 2015
Short description: | p4@WNT7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WNT7A_5end |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | 16bp_to_ENST00000285018, NM_004625, uc003bye.1_5end |
EntrezGene: | WNT7A |
HGNC: | 12786 |
UniProt: | O00755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.27e-21 | 5 |
transitional epithelium | 1.26e-17 | 6 |
urinary system structure | 2.37e-13 | 47 |
gingival epithelium | 3.64e-13 | 3 |
renal system | 5.24e-13 | 48 |
nephron tubule epithelium | 1.85e-09 | 10 |
skin gland | 6.33e-09 | 2 |
epidermis gland | 6.33e-09 | 2 |
gland of integumental system | 6.33e-09 | 2 |
sebaceous gland | 6.33e-09 | 2 |
skin sebaceous gland | 6.33e-09 | 2 |
sweat gland | 6.33e-09 | 2 |
sweat gland placode | 6.33e-09 | 2 |
sebaceous gland placode | 6.33e-09 | 2 |
nephron epithelium | 9.46e-09 | 15 |
renal tubule | 9.46e-09 | 15 |
nephron tubule | 9.46e-09 | 15 |
nephron | 9.46e-09 | 15 |
uriniferous tubule | 9.46e-09 | 15 |
nephrogenic mesenchyme | 9.46e-09 | 15 |
epithelium of mucosa | 1.59e-08 | 8 |
excretory tube | 3.66e-08 | 16 |
kidney epithelium | 3.66e-08 | 16 |
cortex of kidney | 5.61e-08 | 12 |
renal parenchyma | 5.61e-08 | 12 |