FFCP PHASE1:Hg19::chr5:52332019..52332031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:52332019..52332031,- | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_at_chr5:52332019..52332031,- | |||
|id=chr5:52332019..52332031,- | |||
|ontology_enrichment_celltype=CL:0002159!5.71e-10!13;CL:0002076!1.25e-09!43;CL:0002368!3.18e-09!13;CL:0000066!3.73e-08!254;CL:0002166!5.96e-08!3;CL:0002621!8.44e-08!3;CL:0000220!5.03e-07!246;CL:0002321!7.06e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.46e-26;3!CL:0002621;2.68e-25;3!CL:0002159;1.01e-20;14!CL:0000312;3.92e-15;5!CL:0000240;1.05e-12;6!CL:0000311;1.05e-12;6!CL:0000079;1.05e-12;6!CL:0000237;1.05e-12;6!CL:0002077;4.27e-10;34!CL:0002379;3.39e-09;1!CL:0000244;8.54e-09;4!CL:0002327;8.54e-09;4!CL:0000731;8.54e-09;4!CL:0000362;1.23e-08;9!CL:0002076;5.67e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.48e-26,3;CL:0002621,2.80e-25,3;CL:0002159,1.26e-20,14;CL:0000312,5.37e-15,5;CL:0000240,1.36e-12,6;CL:0000311,1.36e-12,6;CL:0000079,1.36e-12,6;CL:0000237,1.36e-12,6;CL:0000036,1.36e-12,6;CL:0000357,1.36e-12,6;CL:0000114,1.36e-12,6;CL:0002077,5.62e-11,34;CL:0002379,3.00e-09,1;CL:0002327,7.00e-09,4;CL:0000244,8.89e-09,4;CL:0000731,8.89e-09,4;CL:0000362,1.45e-08,9;CL:0000066,3.96e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000357;1.05e-12;6!CL:0000114;1.05e-12;6!UBERON:0005425;3.39e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!2.25e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.39e-09;1!DOID:3565;3.39e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.00e-09,1;DOID:3565,3.00e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.52e-10!95;UBERON:0001949!8.44e-08!3;UBERON:0002199!3.51e-07!45;UBERON:0002416!3.51e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.68e-25;3!UBERON:0001708;1.50e-19;4!UBERON:0008895;1.50e-19;4!UBERON:0000486;1.06e-16;12!UBERON:0011159;9.33e-16;5!UBERON:0003929;3.57e-11;7!UBERON:0003350;7.72e-10;8!UBERON:0001828;7.72e-10;8!UBERON:0000941;3.39e-09;1!UBERON:0001785;3.39e-09;1!UBERON:0002464;3.39e-09;1!UBERON:0004904;3.39e-09;1!UBERON:0001021;3.39e-09;1!UBERON:0010371;4.76e-09;31!UBERON:0001911;8.54e-09;4!UBERON:0011137;2.00e-07;11!UBERON:0010323;2.00e-07;11!UBERON:0002118;2.43e-07;5!UBERON:0000365;3.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.80e-25,3;UBERON:0001708,1.51e-19,4;UBERON:0008895,1.51e-19,4;UBERON:0011159,9.35e-16,5;UBERON:0010188,3.20e-13,6;UBERON:0002539,3.20e-13,6;UBERON:0008816,3.20e-13,6;UBERON:0003350,7.85e-10,8;UBERON:0001828,7.85e-10,8;UBERON:0000941,2.77e-09,1;UBERON:0001785,2.77e-09,1;UBERON:0002464,2.77e-09,1;UBERON:0004904,2.77e-09,1;UBERON:0001021,2.77e-09,1;UBERON:0003902,2.77e-09,1;UBERON:0005425,2.77e-09,1;UBERON:0001911,7.00e-09,4;UBERON:0005333,7.00e-09,4;UBERON:0008425,7.00e-09,4;UBERON:0005311,7.00e-09,4;UBERON:0010323,2.00e-07,11;UBERON:0002118,2.28e-07,5;UBERON:0000365,3.45e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0.302256294682921,0.169560592310488,2.70565194428616,2.45471508531751,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85350742062426,2.24803506515239,1.10581869652794,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,10.0789276919316,8.22295564005842,1.25381931783988,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0.802025881213139,0.644566922551274,0.229628896329213,0.728364672026868,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,3.47098322258054,1.72971060628596,1.53135254993501,0.30347334256665,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0.577332676353072,0.670302275535787,0,0,1.72202149068492,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,1.18284119991707,0.796483835818512,0,0.155262956876259,0,0,0,0.150257608997218,0,2.84809513243263,0.181848659202559,0,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0.302256294682921,0.169560592310488,2.70565194428616,2.45471508531751,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85350742062426,2.24803506515239,1.10581869652794,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,10.0789276919316,8.22295564005842,1.25381931783988,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0,0.802025881213139,0.644566922551274,0.229628896329213,0.728364672026868,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,3.47098322258054,1.72971060628596,1.53135254993501,0.30347334256665,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.421258456238981,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0.577332676353072,0.670302275535787,0,0,1.72202149068492,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0.191915197319445,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41159491818903,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,1.18284119991707,0.796483835818512,0,0.155262956876259,0,0,0,0.150257608997218,0,2.84809513243263,0.181848659202559,0,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:52332019..52332031,- | |||
}} | }} |
Latest revision as of 15:10, 30 July 2015
Short description: | p@chr5:52332019..52332031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52332019..52332031, - |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.48e-26 | 3 |
gingival epithelial cell | 2.80e-25 | 3 |
general ecto-epithelial cell | 1.26e-20 | 14 |
keratinocyte | 5.37e-15 | 5 |
stratified squamous epithelial cell | 1.36e-12 | 6 |
keratin accumulating cell | 1.36e-12 | 6 |
stratified epithelial cell | 1.36e-12 | 6 |
keratinizing barrier epithelial cell | 1.36e-12 | 6 |
epithelial fate stem cell | 1.36e-12 | 6 |
stratified epithelial stem cell | 1.36e-12 | 6 |
surface ectodermal cell | 1.36e-12 | 6 |
ecto-epithelial cell | 5.62e-11 | 34 |
meningothelial cell | 3.00e-09 | 1 |
mammary gland epithelial cell | 7.00e-09 | 4 |
transitional epithelial cell | 8.89e-09 | 4 |
urothelial cell | 8.89e-09 | 4 |
epidermal cell | 1.45e-08 | 9 |
epithelial cell | 3.96e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.80e-25 | 3 |
jaw skeleton | 1.51e-19 | 4 |
splanchnocranium | 1.51e-19 | 4 |
primary subdivision of cranial skeletal system | 9.35e-16 | 5 |
protuberance | 3.20e-13 | 6 |
pharyngeal arch | 3.20e-13 | 6 |
embryonic head | 3.20e-13 | 6 |
epithelium of mucosa | 7.85e-10 | 8 |
gingiva | 7.85e-10 | 8 |
cranial nerve II | 2.77e-09 | 1 |
cranial nerve | 2.77e-09 | 1 |
nerve trunk | 2.77e-09 | 1 |
nerve connecting eye with brain | 2.77e-09 | 1 |
nerve | 2.77e-09 | 1 |
retinal neural layer | 2.77e-09 | 1 |
presumptive neural retina | 2.77e-09 | 1 |
mammary gland | 7.00e-09 | 4 |
mammary bud | 7.00e-09 | 4 |
mammary ridge | 7.00e-09 | 4 |
mammary placode | 7.00e-09 | 4 |
cranial skeletal system | 2.00e-07 | 11 |
right ovary | 2.28e-07 | 5 |
urothelium | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.00e-09 | 1 |
meningioma | 3.00e-09 | 1 |