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FFCP PHASE1:Mm9::chr12:35213709..35213769,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:35213709..35213769,-
|DHSsupport=NA
|short_description=p1@Hdac9
|DPIdataset=NA
|description=CAGE_peak_1_at_Hdac9_5end
|association_with_transcript=0bp_to_ENSMUST00000110819,NM_024124,uc007njc.2_5end
|EntrezGene=79221
|EntrezGene=79221
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q99N13
|UniProt=Q99N13
|association_with_transcript=0bp_to_ENSMUST00000110819,NM_024124,uc007njc.2_5end
|cluster_id=chr12:35213709..35213769,-
|description=CAGE_peak_1_at_Hdac9_5end
|id=chr12:35213709..35213769,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.97e-11!63;UBERON:0004121!6.89e-11!102;UBERON:0000924!6.89e-11!102;UBERON:0006601!6.89e-11!102;UBERON:0003056!1.05e-10!49;UBERON:0001017!5.41e-10!73;UBERON:0005743!5.41e-10!73;UBERON:0000073!1.03e-09!75;UBERON:0001016!1.03e-09!75;UBERON:0002346!2.09e-09!71;UBERON:0003075!2.09e-09!71;UBERON:0007284!2.09e-09!71;UBERON:0007100!2.53e-08!18;UBERON:0000948!2.53e-08!18;UBERON:0005498!2.53e-08!18;UBERON:0004140!2.53e-08!18;UBERON:0009881!2.53e-08!18;UBERON:0004141!2.53e-08!18;UBERON:0003084!2.53e-08!18;UBERON:0007005!2.53e-08!18;UBERON:0004139!2.53e-08!18;UBERON:0004291!2.53e-08!18;UBERON:0000955!3.60e-08!50;UBERON:0006238!3.60e-08!50;UBERON:0003080!7.22e-08!40;UBERON:0004535!7.62e-08!23;UBERON:0001009!7.62e-08!23;UBERON:0002780!1.08e-07!39;UBERON:0001890!1.08e-07!39;UBERON:0006240!1.08e-07!39;UBERON:0002616!1.13e-07!49;UBERON:0000956!3.90e-07!21;UBERON:0001869!3.90e-07!21;UBERON:0000203!3.90e-07!21;UBERON:0002791!4.28e-07!29;UBERON:0003528!4.28e-07!29;UBERON:0001893!4.28e-07!29;UBERON:0001049!8.14e-07!52;UBERON:0005068!8.14e-07!52;UBERON:0006241!8.14e-07!52;UBERON:0007135!8.14e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.04e-17,92;UBERON:0004121,6.91e-12,95;UBERON:0000924,6.91e-12,95;UBERON:0006601,6.91e-12,95;UBERON:0003056,3.77e-11,49;UBERON:0002346,5.34e-11,64;UBERON:0003075,5.34e-11,64;UBERON:0007284,5.34e-11,64;UBERON:0001017,2.77e-10,73;UBERON:0010371,5.98e-10,73;UBERON:0001016,6.98e-10,75;UBERON:0007100,1.88e-08,18;UBERON:0000948,1.88e-08,18;UBERON:0005498,1.88e-08,18;UBERON:0004140,1.88e-08,18;UBERON:0009881,1.88e-08,18;UBERON:0004141,1.88e-08,18;UBERON:0003084,1.88e-08,18;UBERON:0007005,1.88e-08,18;UBERON:0004139,1.88e-08,18;UBERON:0004291,1.88e-08,18;UBERON:0000955,2.19e-08,47;UBERON:0006238,2.19e-08,47;UBERON:0003080,3.57e-08,40;UBERON:0002780,5.45e-08,39;UBERON:0001890,5.45e-08,39;UBERON:0006240,5.45e-08,39;UBERON:0002616,7.32e-08,46;UBERON:0004535,7.62e-08,23;UBERON:0001009,7.62e-08,23;UBERON:0000956,2.09e-07,21;UBERON:0001869,2.09e-07,21;UBERON:0000203,2.09e-07,21;UBERON:0003528,2.30e-07,29;UBERON:0002791,2.30e-07,29;UBERON:0001893,2.30e-07,29;UBERON:0000073,4.52e-07,54;UBERON:0001049,5.09e-07,52;UBERON:0005068,5.09e-07,52;UBERON:0006241,5.09e-07,52;UBERON:0007135,5.09e-07,52;UBERON:0002021,8.93e-07,10;UBERON:0000411,8.93e-07,10;UBERON:0001950,8.93e-07,10
|phase1_expression=3.68342348341026,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0,0,0.0797721589953364,0,0,3.66420737997229,3.84703008040669,0,37.3822665949512,43.053932152202,12.3072999021429,2.55129870453209,0.496454756004426,0.783599367416806,1.43993180514066,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,3.65100772129174,2.83855407414641,6.9747765821439,0,1.96222640742402,1.5378032791413,1.74986909166855,0.55994568650145,0,24.4962604844295,0.725362142011344,0,0,0.85960031981627,1.54701627683233,4.85559506063035,3.1739458756322,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,1.92109152660777,5.08079100311541,3.64516033495565,3.99617426567626,1.14260393761521,1.32521124570968,3.67472397644862,3.35459148563827,2.75765635983006,1.10115880999389,8.2996769755372,5.06901559745603,2.63772575460388,2.28719109006024,2.08365348222704,3.62937898701795,3.93933827022176,7.94550888439413,1.17851434189467,2.70506193518296,0.559198337475902,0.37863096666592,3.09843396437821,0.289864488701678,0,0,0,0,0,5.75822122540183,0.681721290312231,0,0,1.54927761754349,0,0,0,0,0,0,1.37020655662872,33.144049106838,1.03909497345377,2.08182392119363,2.13125834818499,1.61430848079241,0.452167921657868,1.99900802130698,0.376999773989026,0.247194967734374,6.65157041831594,6.19227386364912,10.1913115466868,7.95029466457417,7.27312879702833,0,3.51336956413857,1.67557365450764,2.29911349687732,0,0,0,5.99162557619291,3.66000482254901,1.88481528169297,21.38039138365,18.9229438424445,7.68815764870372,9.40999325792994,3.56437773476107,8.45967400148633,0,15.993581047372,2.47228841629137,2.5289231487682,6.48223667299257,9.49440352365005,11.838350852331,27.288222420673,21.1765897504987,34.1488449375501,0,0.945530400839096,1.23165786914764,0.657587197282725,1.94633074457919,5.57203466435466,3.90986059175093,0.995171334092466,0,0,0,23.6123380690472,26.5014447778639,28.8099298337624,40.2466050494857,48.4040010098613,41.3435862538174,36.7403632705644,31.6562613651551,24.5207218971056,26.0004562863299,25.6101243963389,27.4823264360451,30.8481973467451,37.5430697147697,23.4861232830651,15.3511662451813,15.9502149187891,0,0.264450566663544,1.2797295032114,2.55460339046482,1.9330119198314,1.00841762311671,1.77902435075896,1.71203063501303,0,1.15289268306808,2.76468729680296,1.79060824837036,0.19496408711912,0.898819408654221,1.08069024937347,1.7922714592893,0.189667900953082,1.02823661348756,0,1.22190796707189,0,0.420814919341911,0.569128834118316,0,0.470996183524124,0.123397163921801,0,1.66845105716094,0.589676985339609,0.224862112384854,0,0.72353147925725,0.25462585178142,0,0,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0,2.95605104266567,1.32643988239339,1.46668478797823,1.18821560042632,0,1.00503754465089,1.90434912708811,1.36593553500459,1.10344600874334,3.32197034473162,2.07291199254733,4.58817281204066,5.00786447411097,2.02508682014116,0,0,0.491764273019036,1.37968373152366,5.9403718295483,7.14991288212439,1.63934945376675,6.31177318010932,10.7272794601527,8.98009111882268,24.3428439438063,7.40803273652911,14.704712489438,17.2676683781188,9.31064613852257,15.7818163272108,24.5078422326845,35.024023489977,2.98074178937364,2.31485284767432,3.90928702448583,8.41347627159931,1.32745138339963,0.242780636154981,0,0.377210159511796,0.885905678642318,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,11.9153862013826,2.52085531643834,1.03486947026204,1.50035924522115,3.01478397191865,3.74574516964348,4.44282355625727,2.43571959291679,0,0.21183207086382,0.441056796109924,3.2977250588296,1.77610869365496,2.0506394475573,1.55184047204077,1.31312719796049,0.582961673259701,6.11903496634682,7.51831875510552,0,0.555583582109135,4.52084296811258,11.6190093562871,9.83746144788047,0,0,0,4.77335309007557,1.10717597753397,1.21991680276109,2.26811215725783,2.09088296014469,2.18362563746178,2.15782954215713,2.56225712748541,2.87931536182433,0.777689839750757,3.10669656543463,0,1.49516546043979,1.82004339502807,4.86127970860119,2.58319646955462,4.05494701177868,2.93393096614385,2.604087696879,2.30690557736564,0.483168241652012,0.864090018773596,0,0.202725215290164,0.205421914329655,0.77952493786677,0.537080087002444,0.39736270956253,0,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.350630706544707,17.0047787711409,0,0,0,5.40930863290133,0.375364950902364,2.93042598827624,0.428736758158132,1.00314420807073,19.2015626489803,21.1749608793301,19.4784474569395,16.3260523226503,22.6077231524312,16.6186657425734,18.9006300064906,22.0657389579868,16.7662691324156,17.6038505995619,2.17953429926771,4.38927360741134,1.70733605754134,3.40349403895612,3.14419743941973,4.77993121970037,8.22312892865976,9.27157757575024,7.70206103020357,7.58091635291392,9.88569269571935,9.05406438653166,10.2069243142172,9.02754648908657,9.70659425349864,9.0495801343784,7.99601849019503,8.87382414133043,10.3021475200827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|phase1_expression=3.68342348341026,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0,0,0.0797721589953364,0,0,3.66420737997229,3.84703008040669,0,37.3822665949512,43.053932152202,12.3072999021429,2.55129870453209,0.496454756004426,0.783599367416806,1.43993180514066,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,3.65100772129174,2.83855407414641,6.9747765821439,0,1.96222640742402,1.5378032791413,1.74986909166855,0.55994568650145,0,24.4962604844295,0.725362142011344,0,0,0.85960031981627,1.54701627683233,4.85559506063035,3.1739458756322,1.26766280701236,0.338844532069132,0,0,0,0,2.09720077362883,1.92109152660777,5.08079100311541,3.64516033495565,3.99617426567626,1.14260393761521,1.32521124570968,3.67472397644862,3.35459148563827,2.75765635983006,1.10115880999389,8.2996769755372,5.06901559745603,2.63772575460388,2.28719109006024,2.08365348222704,3.62937898701795,3.93933827022176,7.94550888439413,1.17851434189467,2.70506193518296,0.559198337475902,0.37863096666592,3.09843396437821,0.289864488701678,0,0,0,0,0,5.75822122540183,0.681721290312231,0,0,1.54927761754349,0,0,0,0,0,0,1.37020655662872,33.144049106838,1.03909497345377,2.08182392119363,2.13125834818499,1.61430848079241,0.452167921657868,1.99900802130698,0.376999773989026,0.247194967734374,6.65157041831594,6.19227386364912,10.1913115466868,7.95029466457417,7.27312879702833,0,3.51336956413857,1.67557365450764,2.29911349687732,0,0,0,5.99162557619291,3.66000482254901,1.88481528169297,21.38039138365,18.9229438424445,7.68815764870372,9.40999325792994,3.56437773476107,8.45967400148633,0,15.993581047372,2.47228841629137,2.5289231487682,6.48223667299257,9.49440352365005,11.838350852331,27.288222420673,21.1765897504987,34.1488449375501,0,0.945530400839096,1.23165786914764,0.657587197282725,1.94633074457919,5.57203466435466,3.90986059175093,0.995171334092466,0,0,0,23.6123380690472,26.5014447778639,28.8099298337624,40.2466050494857,48.4040010098613,41.3435862538174,36.7403632705644,31.6562613651551,24.5207218971056,26.0004562863299,25.6101243963389,27.4823264360451,30.8481973467451,37.5430697147697,23.4861232830651,15.3511662451813,15.9502149187891,0,0.264450566663544,1.2797295032114,2.55460339046482,1.9330119198314,1.00841762311671,1.77902435075896,1.71203063501303,0,1.15289268306808,2.76468729680296,1.79060824837036,0.19496408711912,0.898819408654221,1.08069024937347,1.7922714592893,0.189667900953082,1.02823661348756,0,1.22190796707189,0,0.420814919341911,0.569128834118316,0,0.470996183524124,0.123397163921801,0,1.66845105716094,0.589676985339609,0.224862112384854,0,0.72353147925725,0.25462585178142,0,0,0.549122826376163,0,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0,2.95605104266567,1.32643988239339,1.46668478797823,1.18821560042632,0,1.00503754465089,1.90434912708811,1.36593553500459,1.10344600874334,3.32197034473162,2.07291199254733,4.58817281204066,5.00786447411097,2.02508682014116,0,0,0.491764273019036,1.37968373152366,5.9403718295483,7.14991288212439,1.63934945376675,6.31177318010932,10.7272794601527,8.98009111882268,24.3428439438063,7.40803273652911,14.704712489438,17.2676683781188,9.31064613852257,15.7818163272108,24.5078422326845,35.024023489977,2.98074178937364,2.31485284767432,3.90928702448583,8.41347627159931,1.32745138339963,0.242780636154981,0,0.377210159511796,0.885905678642318,0.922305443831782,0.775284879504663,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,11.9153862013826,2.52085531643834,1.03486947026204,1.50035924522115,3.01478397191865,3.74574516964348,4.44282355625727,2.43571959291679,0,0.21183207086382,0.441056796109924,3.2977250588296,1.77610869365496,2.0506394475573,1.55184047204077,1.31312719796049,0.582961673259701,6.11903496634682,7.51831875510552,0,0.555583582109135,4.52084296811258,11.6190093562871,9.83746144788047,0,0,0,4.77335309007557,1.10717597753397,1.21991680276109,2.26811215725783,2.09088296014469,2.18362563746178,2.15782954215713,2.56225712748541,2.87931536182433,0.777689839750757,3.10669656543463,0,1.49516546043979,1.82004339502807,4.86127970860119,2.58319646955462,4.05494701177868,2.93393096614385,2.604087696879,2.30690557736564,0.483168241652012,0.864090018773596,0,0.202725215290164,0.205421914329655,0.77952493786677,0.537080087002444,0.39736270956253,0,0,0.100966449948148,0,0,0.194915761479505,0.192423683280659,0.350630706544707,17.0047787711409,0,0,0,5.40930863290133,0.375364950902364,2.93042598827624,0.428736758158132,1.00314420807073,19.2015626489803,21.1749608793301,19.4784474569395,16.3260523226503,22.6077231524312,16.6186657425734,18.9006300064906,22.0657389579868,16.7662691324156,17.6038505995619,2.17953429926771,4.38927360741134,1.70733605754134,3.40349403895612,3.14419743941973,4.77993121970037,8.22312892865976,9.27157757575024,7.70206103020357,7.58091635291392,9.88569269571935,9.05406438653166,10.2069243142172,9.02754648908657,9.70659425349864,9.0495801343784,7.99601849019503,8.87382414133043,10.3021475200827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|short_description=p1@Hdac9
}}
}}

Latest revision as of 14:00, 26 September 2015

Short description:p1@Hdac9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hdac9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000110819, NM_024124, uc007njc.2_5end
EntrezGene:Hdac9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hdac9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A237.38
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A443.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H933.14
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F510.19
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D521.38
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.46
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G415.99
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C611.84
eyeball, neonate N01.CNhs11140.1532-43E727.29
eyeball, neonate N02.CNhs11205.1551-44G821.18
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E923.61
heart, embryo E12.CNhs11015.353-12F526.50
heart, embryo E13.CNhs11013.376-3I928.81
heart, embryo E14.CNhs10597.403-26D440.25
heart, embryo E15.CNhs11017.431-16C848.40
heart, embryo E16.CNhs11021.457-17C641.34
heart, embryo E17.CNhs11025.479-18E536.74
heart, embryo E18.CNhs11030.1283-20G331.66
heart, neonate N00.CNhs11213.639-21E324.52
heart, neonate N03.CNhs11221.1349-25I226.00
heart, neonate N10.CNhs11118.749-24G125.61
heart, neonate N16.CNhs11209.782-15G127.48
heart, neonate N20.CNhs11127.821-26I630.85
heart, neonate N25.CNhs11196.1351-25D337.54
heart, neonate N30.CNhs11202.1390-42D223.49
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G115.95
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.51
olfactory brain, adult.CNhs10489.18-22I935.02
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G68.41
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.92
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H111.62
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.04e-1792
ectoderm-derived structure6.91e-1295
ectoderm6.91e-1295
presumptive ectoderm6.91e-1295
pre-chordal neural plate3.77e-1149
neurectoderm5.34e-1164
neural plate5.34e-1164
presumptive neural plate5.34e-1164
central nervous system2.77e-1073
ecto-epithelium5.98e-1073
nervous system6.98e-1075
primary circulatory organ1.88e-0818
heart1.88e-0818
primitive heart tube1.88e-0818
primary heart field1.88e-0818
anterior lateral plate mesoderm1.88e-0818
heart tube1.88e-0818
heart primordium1.88e-0818
cardiac mesoderm1.88e-0818
cardiogenic plate1.88e-0818
heart rudiment1.88e-0818
brain2.19e-0847
future brain2.19e-0847
anterior neural tube3.57e-0840
regional part of forebrain5.45e-0839
forebrain5.45e-0839
future forebrain5.45e-0839
regional part of brain7.32e-0846
cardiovascular system7.62e-0823
circulatory system7.62e-0823
cerebral cortex2.09e-0721
cerebral hemisphere2.09e-0721
pallium2.09e-0721
brain grey matter2.30e-0729
regional part of telencephalon2.30e-0729
telencephalon2.30e-0729
regional part of nervous system4.52e-0754
neural tube5.09e-0752
neural rod5.09e-0752
future spinal cord5.09e-0752
neural keel5.09e-0752
occipital lobe8.93e-0710
visual cortex8.93e-0710
neocortex8.93e-0710
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