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(Created page with "{{f5samples |id=FF:11882-125D1 |name=CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3 |sample_id=11882 |rna_tube_id= |rna_box=125 |rna_position=D1 |sam...")
 
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{{f5samples
{{f5samples
|id=FF:11882-125D1
|DRA_sample_Accession=CAGE@SAMD00005810
|name=CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3
|accession_numbers=CAGE;DRX008158;DRR009030;DRZ000455;DRZ001840;DRZ011805;DRZ013190
|sample_id=11882
|ancestors_in_anatomy_facet=
|rna_tube_id=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
|rna_box=125
|rna_position=D1
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=D5-3
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=donor3
|sample_sex=female
|sample_age=21
|sample_ethnicity=
|rna_rin=9.10000
|rna_od260/230=1.34000
|rna_od260/280=1.94000
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Christine Wells (University of Queensland)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.94944
|rna_concentration=0.43321
|sample_note=
|profile_hcage=CNhs13544,,,LIBRARY SCHEDULED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000631,FF:0011444
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.95!8845.02!PLEK;;chr16:85932760..85932775,+!p1@IRF8!3.06!1142.41!IRF8;;chr10:35484053..35484076,+!p1@CREM!2.70!1201.49!CREM;;chr10:64576105..64576133,-!p1@EGR2!2.69!976.05!EGR2;;chr11:47400078..47400106,-!p1@SPI1!2.62!415.48!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.47!291.68!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!2.29!193.73!ZNF385A;;chr11:64764435..64764449,-!p1@BATF2!2.20!213.06!BATF2;;chr1:158985493..158985535,+!p4@IFI16!2.14!205.68!IFI16;;chr6:106534192..106534224,+!p1@PRDM1!2.07!314.92!PRDM1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.72!SPI1;;chr20:39317868..39317884,-!p1@MAFB!2.05!1245.80!MAFB;;chr21:36260295..36260310,-!p3@RUNX1!2.05!175.49!RUNX1;;chr2:68592394..68592405,+!p2@PLEK!2.04!108.38!PLEK;;chr10:35484090..35484104,+!p6@CREM!2.04!107.94!CREM;;chr16:31885093..31885165,+!p1@ZNF267!2.02!1486.87!ZNF267;;chr19:45971246..45971265,+!p1@FOSB!2.01!1769.87!FOSB;;chr6:36355431..36355466,-!p1@ETV7!2.01!101.43!ETV7;;chr21:34442439..34442455,+!p1@OLIG1!1.98!94.48!OLIG1;;chr10:31288398..31288455,-!p2@ZNF438!1.93!97.30!ZNF438;;chr11:47400062..47400077,-!p2@SPI1!1.93!84.05!SPI1;;chr5:131826457..131826514,-!p1@IRF1!1.91!2956.59!IRF1;;chr17:45810594..45810608,+!p1@TBX21!1.89!76.67!TBX21;;chr21:30671690..30671762,+!p2@BACH1!1.88!241.73!BACH1;;chr10:64018918..64018936,+!p2@ZNF365!1.88!75.36!ZNF365;;chr8:22550982..22550999,-!p1@EGR3!1.83!180.05!EGR3;;chr6:106534230..106534254,+!p2@PRDM1!1.81!155.94!PRDM1;;chr2:231084639..231084654,-!p2@SP110!1.79!99.26!SP110;;chr2:157189180..157189290,-!p1@NR4A2!1.78!294.29!NR4A2;;chr1:158979872..158979898,+!p3@IFI16!1.78!174.40!IFI16;;chr2:145277640..145277771,-!p1@ZEB2!1.77!735.18!ZEB2;;chr11:65430554..65430579,-!p3@RELA!1.76!139.87!RELA;;chr14:75988831..75988847,+!p2@BATF!1.74!53.43!BATF;;chr10:31288370..31288393,-!p3@ZNF438!1.73!52.99!ZNF438;;chr22:38597987..38598021,+!p2@MAFF!1.72!299.72!MAFF;;chr12:72056800..72056834,+!p1@THAP2!1.72!67.76!THAP2;;chr11:615942..615957,-!p1@IRF7!1.71!449.15!IRF7;;chr2:231090471..231090504,+!p2@SP140!1.71!49.74!SP140;;chr7:128577972..128578047,+!p1@IRF5!1.70!76.23!IRF5;;chr2:97202480..97202499,+!p1@ARID5A!1.69!456.31!ARID5A;;chr11:47399996..47400014,-!p4@SPI1!1.68!46.91!SPI1;;chr21:30671235..30671253,+!p1@BACH1!1.66!536.67!BACH1;;chr1:25256756..25256774,-!p1@RUNX3!1.66!82.53!RUNX3;;chr11:47400032..47400043,-!p5@SPI1!1.66!44.31!SPI1;;chr1:212782094..212782109,+!p1@ATF3!1.65!1111.14!ATF3;;chr21:36421535..36421610,-!p2@RUNX1!1.64!145.08!RUNX1;;chr3:12329397..12329433,+!p2@PPARG!1.64!95.35!PPARG;;chr2:70142232..70142251,+!p1@MXD1!1.63!224.57!MXD1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.33!CEBPA;;chr1:221052733..221052749,+!p2@HLX!1.61!51.26!HLX;;chr12:54778351..54778378,-!p6@ZNF385A!1.61!40.18!ZNF385A;;chr3:12330560..12330579,+!p1@PPARG!1.60!44.74!PPARG;;chr12:72056749..72056767,+!p6@THAP2!1.60!43.00!THAP2;;chr7:50344289..50344323,+!p1@IKZF1!1.60!38.66!IKZF1;;chr10:35484804..35484902,+!p2@CREM!1.59!140.52!CREM;;chr11:65430535..65430549,-!p4@RELA!1.59!44.09!RELA;;chr19:45251395..45251432,+!p8@BCL3!1.59!37.79!BCL3;;chr14:75988771..75988826,+!p1@BATF!1.56!46.70!BATF;;chr9:102584159..102584174,+!p2@NR4A3!1.55!60.81!NR4A3;;chr19:50432132..50432217,+!p2@ATF5!1.55!41.27!ATF5;;chrX:153305787..153305807,-!p3@MECP2!1.55!34.10!MECP2;;chr4:106068026..106068084,+!p1@TET2!1.51!273.22!TET2;;chr13:41593425..41593480,-!p1@ELF1!1.51!191.34!ELF1;;chr12:72056773..72056796,+!p3@THAP2!1.51!40.40!THAP2;;chr21:34398234..34398250,+!p1@OLIG2!1.51!31.06!OLIG2;;chr10:51572408..51572454,+!p3@NCOA4!1.49!168.76!NCOA4;;chr2:145275162..145275202,-!p2@ZEB2!1.49!168.32!ZEB2;;chr16:79634624..79634642,-!p1@MAF!1.49!114.24!MAF;;chr6:126240380..126240430,+!p2@NCOA7!1.49!75.36!NCOA7;;chr17:38497662..38497713,+!p4@RARA!1.48!33.66!RARA;;chr3:187463179..187463201,-!p2@BCL6!1.47!113.81!BCL6;;chr9:110252035..110252057,-!p1@KLF4!1.46!428.30!KLF4;;chr6:15246200..15246214,+!p2@JARID2!1.46!75.36!JARID2;;chr11:47400045..47400060,-!p6@SPI1!1.46!27.80!SPI1;;chr6:106535598..106535637,+!p7@PRDM1!1.45!27.15!PRDM1;;chr12:52445218..52445237,+!p1@NR4A1!1.44!322.31!NR4A1;;chr12:48298765..48298783,-!p2@VDR!1.44!53.86!VDR;;chr21:36260343..36260402,-!p6@RUNX1!1.44!41.70!RUNX1;;chr14:35872453..35872485,-!p2@NFKBIA!1.43!63.20!NFKBIA;;chr6:144385698..144385742,-!p2@PLAGL1!1.43!31.49!PLAGL1;;chr6:391743..391759,+!p1@IRF4!1.43!26.06!IRF4;;chr8:53373491..53373506,-!p4@ST18!1.39!23.67!ST18;;chr20:48599506..48599526,+!p1@SNAI1!1.38!144.43!SNAI1;;chr12:11802753..11802834,+!p2@ETV6!1.38!110.77!ETV6;;chr22:38598057..38598071,+!p3@MAFF!1.38!52.99!MAFF;;chr13:41635029..41635044,-!p4@ELF1!1.38!47.78!ELF1;;chr11:47399920..47399931,-!p7@SPI1!1.38!23.24!SPI1;;chr14:75745523..75745537,+!p1@FOS!1.37!2604.96!FOS;;chr20:48807351..48807384,+!p1@CEBPB!1.37!2176.23!CEBPB;;chr2:61108695..61108753,+!p1@REL!1.37!151.38!REL;;chr18:3449720..3449749,+!p2@TGIF1!1.37!46.70!TGIF1;;chr6:126240463..126240489,+!p6@NCOA7!1.37!24.98!NCOA7;;chr9:129567282..129567353,+!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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=EFO:0000369,FF:0000625,FF:0000631,FF:0011444,FF:11882-125D1
|fonse_treatment=EFO:0000369,FF:0000625,FF:0000631,FF:0011444,FF:11882-125D1
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|fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000631,FF:0011444,FF:11882-125D1
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|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg38.nobarcode.ctss.bed.gz
|id=FF:11882-125D1
|is_a=EFO:0002091;;FF:0011444
|is_obsolete=
|library_id=CNhs13544
|library_id_phase_based=2:CNhs13544
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11882
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11882
|name=CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3
|namespace=
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|profile_hcage=CNhs13544,LSID1029,release012,COMPLETED
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.43321
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=D5-3
|rna_od260/230=1.34
|rna_od260/280=1.94
|rna_position=D1
|rna_rin=9.1
|rna_sample_type=total RNA
|rna_tube_id=125D1
|rna_weight_ug=1.949445
|sample_age=21
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor3
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.22654020095198e-268!GO:0005737;cytoplasm;2.27992840348923e-122!GO:0043227;membrane-bound organelle;3.46744145792181e-121!GO:0043231;intracellular membrane-bound organelle;6.9387599778834e-121!GO:0043226;organelle;1.24701261794254e-110!GO:0043229;intracellular organelle;7.81838799380695e-110!GO:0044444;cytoplasmic part;1.485885809988e-80!GO:0044237;cellular metabolic process;4.44945532272945e-70!GO:0044422;organelle part;2.27619621088379e-69!GO:0044238;primary metabolic process;7.40715037328151e-68!GO:0044446;intracellular organelle part;7.40715037328151e-68!GO:0043170;macromolecule metabolic process;2.43454217934488e-67!GO:0005515;protein binding;6.11055799129404e-67!GO:0032991;macromolecular complex;9.60888207914023e-59!GO:0003723;RNA binding;4.54535186427017e-57!GO:0030529;ribonucleoprotein complex;4.75260366728467e-53!GO:0005634;nucleus;1.43949019040969e-51!GO:0044428;nuclear part;1.36305791074685e-47!GO:0019538;protein metabolic process;3.66938355777378e-47!GO:0044267;cellular protein metabolic process;5.21715593633298e-45!GO:0044260;cellular macromolecule metabolic process;8.31369904235027e-45!GO:0033036;macromolecule localization;6.15760199681187e-42!GO:0006412;translation;6.34453886268804e-41!GO:0015031;protein transport;7.06006946592222e-41!GO:0045184;establishment of protein localization;1.15419195946663e-40!GO:0043233;organelle lumen;3.40603382369531e-39!GO:0031974;membrane-enclosed lumen;3.40603382369531e-39!GO:0008104;protein localization;4.44904162340301e-39!GO:0043283;biopolymer metabolic process;5.79956975474853e-38!GO:0010467;gene expression;3.24643002925026e-36!GO:0005829;cytosol;1.08570058413529e-35!GO:0031090;organelle membrane;3.36574691854497e-32!GO:0006396;RNA processing;4.86579397840408e-32!GO:0016071;mRNA metabolic process;1.02340487439609e-31!GO:0006915;apoptosis;1.80222158842971e-31!GO:0012501;programmed cell death;2.36428434964601e-31!GO:0031981;nuclear lumen;6.24646783816921e-30!GO:0008219;cell death;6.61341912204259e-30!GO:0016265;death;6.61341912204259e-30!GO:0009059;macromolecule biosynthetic process;1.14634717074964e-29!GO:0044249;cellular biosynthetic process;3.29433772898062e-29!GO:0043234;protein complex;5.21428039190469e-29!GO:0005739;mitochondrion;1.20540109483911e-28!GO:0008380;RNA splicing;1.98893452366063e-28!GO:0009058;biosynthetic process;2.14954529813537e-28!GO:0005840;ribosome;1.26661112899409e-27!GO:0006397;mRNA processing;1.83273803940127e-27!GO:0046907;intracellular transport;3.00597472913651e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.4832966370987e-27!GO:0006886;intracellular protein transport;5.0017647341465e-27!GO:0031967;organelle envelope;5.76127770248717e-26!GO:0003735;structural constituent of ribosome;1.04905312288522e-25!GO:0031975;envelope;1.10751930213631e-25!GO:0016043;cellular component organization and biogenesis;4.86021632520131e-25!GO:0033279;ribosomal subunit;2.47947938455955e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.17236533080575e-24!GO:0044445;cytosolic part;2.96816818009434e-22!GO:0005681;spliceosome;1.24414506110339e-21!GO:0044429;mitochondrial part;2.47071523412657e-21!GO:0051649;establishment of cellular localization;3.04827772016134e-21!GO:0042981;regulation of apoptosis;4.14037400609458e-21!GO:0005654;nucleoplasm;7.5183572958563e-21!GO:0043067;regulation of programmed cell death;1.08594829901912e-20!GO:0000166;nucleotide binding;1.37288410070587e-20!GO:0051641;cellular localization;1.58786113213652e-20!GO:0065003;macromolecular complex assembly;1.86248689771741e-19!GO:0008134;transcription factor binding;2.91929566065806e-19!GO:0006512;ubiquitin cycle;4.25775114135751e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.9917181990406e-18!GO:0003676;nucleic acid binding;1.52964501461159e-17!GO:0044265;cellular macromolecule catabolic process;1.53227773885638e-17!GO:0006119;oxidative phosphorylation;1.86952704460171e-17!GO:0016192;vesicle-mediated transport;3.84859896370179e-17!GO:0044451;nucleoplasm part;4.03584195214327e-17!GO:0007243;protein kinase cascade;6.47759028661108e-17!GO:0002376;immune system process;7.90664146501715e-17!GO:0016070;RNA metabolic process;8.76577444037781e-17!GO:0043412;biopolymer modification;2.31655060568603e-16!GO:0048523;negative regulation of cellular process;2.35423253114021e-16!GO:0005740;mitochondrial envelope;2.63080892924917e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.07494524385298e-16!GO:0022607;cellular component assembly;6.12921028300774e-16!GO:0016462;pyrophosphatase activity;6.34544064330827e-16!GO:0017111;nucleoside-triphosphatase activity;7.71438432313582e-16!GO:0043285;biopolymer catabolic process;8.04882677907096e-16!GO:0022618;protein-RNA complex assembly;8.30175185967132e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;8.30175185967132e-16!GO:0031966;mitochondrial membrane;9.4924296897203e-16!GO:0050794;regulation of cellular process;1.06953336589124e-15!GO:0048770;pigment granule;1.13329889394597e-15!GO:0042470;melanosome;1.13329889394597e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.82307288701692e-15!GO:0019866;organelle inner membrane;2.65427326451754e-15!GO:0006464;protein modification process;3.08693424755357e-15!GO:0032553;ribonucleotide binding;4.983889640791e-15!GO:0032555;purine ribonucleotide binding;4.983889640791e-15!GO:0019941;modification-dependent protein catabolic process;6.02197434495305e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.02197434495305e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;7.42457913616452e-15!GO:0043687;post-translational protein modification;7.50586589555199e-15!GO:0044257;cellular protein catabolic process;7.74740233718482e-15!GO:0009057;macromolecule catabolic process;9.34133414284384e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.25323355221451e-14!GO:0005773;vacuole;1.5725272296197e-14!GO:0048519;negative regulation of biological process;1.70904837581207e-14!GO:0017076;purine nucleotide binding;1.93402931632085e-14!GO:0006955;immune response;3.04633489999069e-14!GO:0007242;intracellular signaling cascade;7.47269311076491e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.55877567254951e-14!GO:0016874;ligase activity;9.6806042743173e-14!GO:0006605;protein targeting;1.03851251235286e-13!GO:0044248;cellular catabolic process;2.64562696061557e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.1111048244914e-13!GO:0015934;large ribosomal subunit;4.86779748153047e-13!GO:0043069;negative regulation of programmed cell death;4.9117062055368e-13!GO:0043066;negative regulation of apoptosis;5.45041969430599e-13!GO:0030163;protein catabolic process;5.64430600699283e-13!GO:0000323;lytic vacuole;5.88618302520102e-13!GO:0005764;lysosome;5.88618302520102e-13!GO:0016604;nuclear body;8.07615513585873e-13!GO:0005743;mitochondrial inner membrane;1.10905740753274e-12!GO:0050789;regulation of biological process;1.13566485341105e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.46502114684059e-12!GO:0006950;response to stress;2.69930430265109e-12!GO:0006457;protein folding;2.74205356732296e-12!GO:0006913;nucleocytoplasmic transport;3.122553047258e-12!GO:0015935;small ribosomal subunit;3.13794155181372e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.30581301240491e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.50805534397336e-12!GO:0044455;mitochondrial membrane part;4.68356469479238e-12!GO:0051169;nuclear transport;5.71633790043737e-12!GO:0008135;translation factor activity, nucleic acid binding;5.83088619680641e-12!GO:0006996;organelle organization and biogenesis;7.07605321011277e-12!GO:0003712;transcription cofactor activity;7.85742150262128e-12!GO:0009615;response to virus;8.33622317502663e-12!GO:0005768;endosome;1.02014487451924e-11!GO:0012505;endomembrane system;1.21736426825322e-11!GO:0006366;transcription from RNA polymerase II promoter;1.33588717846479e-11!GO:0006793;phosphorus metabolic process;1.47637964222874e-11!GO:0006796;phosphate metabolic process;1.47637964222874e-11!GO:0051246;regulation of protein metabolic process;1.60253537006881e-11!GO:0016607;nuclear speck;1.91485384287961e-11!GO:0006259;DNA metabolic process;3.10107698722614e-11!GO:0006413;translational initiation;3.99321526936149e-11!GO:0065009;regulation of a molecular function;4.51897397986236e-11!GO:0003743;translation initiation factor activity;4.78914012825765e-11!GO:0065007;biological regulation;7.87670224725524e-11!GO:0006916;anti-apoptosis;8.56966398508959e-11!GO:0005794;Golgi apparatus;1.01194427769504e-10!GO:0016310;phosphorylation;1.32158364190572e-10!GO:0006446;regulation of translational initiation;1.85456198727042e-10!GO:0005524;ATP binding;3.14297133901975e-10!GO:0051186;cofactor metabolic process;4.80875913963518e-10!GO:0032559;adenyl ribonucleotide binding;4.80875913963518e-10!GO:0031324;negative regulation of cellular metabolic process;4.96108305845444e-10!GO:0051082;unfolded protein binding;7.89624398558921e-10!GO:0048522;positive regulation of cellular process;8.40249195991087e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.68790540933009e-10!GO:0005746;mitochondrial respiratory chain;9.89138544537606e-10!GO:0005730;nucleolus;9.98751127902251e-10!GO:0005635;nuclear envelope;1.2749034521556e-09!GO:0030554;adenyl nucleotide binding;1.77621553461301e-09!GO:0008639;small protein conjugating enzyme activity;1.78688692460049e-09!GO:0019787;small conjugating protein ligase activity;2.51414605833349e-09!GO:0004842;ubiquitin-protein ligase activity;2.57610255646202e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.12648958893653e-09!GO:0015986;ATP synthesis coupled proton transport;3.3918700597817e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.3918700597817e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.67240000492332e-09!GO:0000375;RNA splicing, via transesterification reactions;3.67240000492332e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.67240000492332e-09!GO:0009967;positive regulation of signal transduction;3.81052505754295e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.81052505754295e-09!GO:0006732;coenzyme metabolic process;4.15477627668438e-09!GO:0050136;NADH dehydrogenase (quinone) activity;4.65629244960873e-09!GO:0003954;NADH dehydrogenase activity;4.65629244960873e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.65629244960873e-09!GO:0048518;positive regulation of biological process;4.65802630591626e-09!GO:0016787;hydrolase activity;5.10786512889426e-09!GO:0043065;positive regulation of apoptosis;6.57251162470755e-09!GO:0005770;late endosome;7.61285283699615e-09!GO:0005783;endoplasmic reticulum;8.48739084562297e-09!GO:0009056;catabolic process;8.58610121869176e-09!GO:0019829;cation-transporting ATPase activity;9.24443871249623e-09!GO:0009607;response to biotic stimulus;9.75254864031829e-09!GO:0043068;positive regulation of programmed cell death;1.06872630619011e-08!GO:0006417;regulation of translation;1.17370103471831e-08!GO:0006163;purine nucleotide metabolic process;1.50616091504239e-08!GO:0009892;negative regulation of metabolic process;1.7144003566545e-08!GO:0006164;purine nucleotide biosynthetic process;1.99282606422653e-08!GO:0042623;ATPase activity, coupled;2.09610405510522e-08!GO:0017038;protein import;2.23568131189734e-08!GO:0009259;ribonucleotide metabolic process;2.37977773250898e-08!GO:0048193;Golgi vesicle transport;2.60072967151774e-08!GO:0009150;purine ribonucleotide metabolic process;2.62258404776596e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.84863461339345e-08!GO:0019222;regulation of metabolic process;3.1691263978614e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.25506815673979e-08!GO:0007049;cell cycle;3.54874445177258e-08!GO:0005525;GTP binding;4.19359562375489e-08!GO:0016887;ATPase activity;4.58882943315344e-08!GO:0006754;ATP biosynthetic process;4.7079041393249e-08!GO:0006753;nucleoside phosphate metabolic process;4.7079041393249e-08!GO:0050790;regulation of catalytic activity;4.74042449954098e-08!GO:0042775;organelle ATP synthesis coupled electron transport;6.01718356334748e-08!GO:0042773;ATP synthesis coupled electron transport;6.01718356334748e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.02757449934337e-08!GO:0003924;GTPase activity;6.74356050457423e-08!GO:0009260;ribonucleotide biosynthetic process;6.90306575215263e-08!GO:0044453;nuclear membrane part;6.97633611089906e-08!GO:0016564;transcription repressor activity;7.90625105066911e-08!GO:0016881;acid-amino acid ligase activity;8.35748069202833e-08!GO:0009889;regulation of biosynthetic process;8.45490228689861e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.93453379563162e-08!GO:0007264;small GTPase mediated signal transduction;8.96543643804683e-08!GO:0051170;nuclear import;1.01504820589112e-07!GO:0031965;nuclear membrane;1.04147565572263e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.11299023444592e-07!GO:0045271;respiratory chain complex I;1.11299023444592e-07!GO:0005747;mitochondrial respiratory chain complex I;1.11299023444592e-07!GO:0008047;enzyme activator activity;1.20634956283642e-07!GO:0016481;negative regulation of transcription;1.33270889512018e-07!GO:0006917;induction of apoptosis;1.44484622270629e-07!GO:0005774;vacuolar membrane;1.49124997792217e-07!GO:0048468;cell development;1.65332962801035e-07!GO:0051726;regulation of cell cycle;1.73276516266471e-07!GO:0008565;protein transporter activity;1.74090943642479e-07!GO:0000074;regulation of progression through cell cycle;1.88762116278224e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.94131902010151e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.94131902010151e-07!GO:0046034;ATP metabolic process;2.03778836148109e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.047146056526e-07!GO:0009966;regulation of signal transduction;2.07924956917094e-07!GO:0031326;regulation of cellular biosynthetic process;2.16339296319714e-07!GO:0006606;protein import into nucleus;2.23933253863543e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.23933253863543e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.25432278500622e-07!GO:0012502;induction of programmed cell death;2.36909714412647e-07!GO:0003713;transcription coactivator activity;2.52131542270412e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.67648386644631e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.67648386644631e-07!GO:0009055;electron carrier activity;3.75907080297686e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.22338387144418e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.22338387144418e-07!GO:0044440;endosomal part;4.85982851033018e-07!GO:0010008;endosome membrane;4.85982851033018e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.53344986945285e-07!GO:0006974;response to DNA damage stimulus;5.59463242301907e-07!GO:0051188;cofactor biosynthetic process;5.88352815892958e-07!GO:0050657;nucleic acid transport;6.63653733489739e-07!GO:0051236;establishment of RNA localization;6.63653733489739e-07!GO:0050658;RNA transport;6.63653733489739e-07!GO:0031980;mitochondrial lumen;7.13291666442563e-07!GO:0005759;mitochondrial matrix;7.13291666442563e-07!GO:0045786;negative regulation of progression through cell cycle;7.46132868909609e-07!GO:0044437;vacuolar part;7.60452276676126e-07!GO:0044432;endoplasmic reticulum part;8.47283563797193e-07!GO:0009108;coenzyme biosynthetic process;8.55677687827202e-07!GO:0006403;RNA localization;9.08067615461628e-07!GO:0005765;lysosomal membrane;9.29965914367709e-07!GO:0032561;guanyl ribonucleotide binding;1.11349589481702e-06!GO:0019001;guanyl nucleotide binding;1.11349589481702e-06!GO:0019899;enzyme binding;1.24609827680272e-06!GO:0006752;group transfer coenzyme metabolic process;1.30138886029932e-06!GO:0009141;nucleoside triphosphate metabolic process;1.46018749454761e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.50282651612741e-06!GO:0004386;helicase activity;1.73960046298388e-06!GO:0008026;ATP-dependent helicase activity;1.76424492196535e-06!GO:0005793;ER-Golgi intermediate compartment;1.82527138383286e-06!GO:0005643;nuclear pore;1.82584343713077e-06!GO:0043228;non-membrane-bound organelle;2.32797253767336e-06!GO:0043232;intracellular non-membrane-bound organelle;2.32797253767336e-06!GO:0031323;regulation of cellular metabolic process;3.7238559283006e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.16856501945411e-06!GO:0032446;protein modification by small protein conjugation;4.68750237074781e-06!GO:0016568;chromatin modification;5.36520889778086e-06!GO:0004298;threonine endopeptidase activity;5.44814247492206e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.52135506422676e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.20968364208219e-06!GO:0016567;protein ubiquitination;7.36933706413066e-06!GO:0030695;GTPase regulator activity;7.84173255845719e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;9.07839381579256e-06!GO:0051028;mRNA transport;9.23155584268474e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.36517945040521e-06!GO:0016563;transcription activator activity;9.64225844505298e-06!GO:0006281;DNA repair;9.6571330057616e-06!GO:0016044;membrane organization and biogenesis;1.00960344984283e-05!GO:0005789;endoplasmic reticulum membrane;1.00960344984283e-05!GO:0031982;vesicle;1.52837404444407e-05!GO:0006461;protein complex assembly;1.53748123610518e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.54107264697446e-05!GO:0015399;primary active transmembrane transporter activity;1.54107264697446e-05!GO:0006954;inflammatory response;1.55261970278819e-05!GO:0006323;DNA packaging;1.93836202795227e-05!GO:0031902;late endosome membrane;1.94889750619444e-05!GO:0022402;cell cycle process;2.03894368333218e-05!GO:0003714;transcription corepressor activity;2.08899305260766e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.11325986185652e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.20702484730604e-05!GO:0016197;endosome transport;2.27657437651459e-05!GO:0046930;pore complex;2.85621918953675e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.95655911815781e-05!GO:0048475;coated membrane;3.47384857203731e-05!GO:0030117;membrane coat;3.47384857203731e-05!GO:0030099;myeloid cell differentiation;3.52059190301215e-05!GO:0003724;RNA helicase activity;3.59886909580991e-05!GO:0065002;intracellular protein transport across a membrane;3.7186711906328e-05!GO:0005096;GTPase activator activity;3.99166509654369e-05!GO:0010468;regulation of gene expression;4.88717365594865e-05!GO:0043566;structure-specific DNA binding;4.89357783583846e-05!GO:0051336;regulation of hydrolase activity;4.97663140984806e-05!GO:0008234;cysteine-type peptidase activity;5.05105270898147e-05!GO:0031252;leading edge;5.17029697621728e-05!GO:0045259;proton-transporting ATP synthase complex;5.21695840723065e-05!GO:0006613;cotranslational protein targeting to membrane;5.81937438998882e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.30338882415413e-05!GO:0030532;small nuclear ribonucleoprotein complex;6.95432936394624e-05!GO:0051707;response to other organism;7.13496786012411e-05!GO:0005083;small GTPase regulator activity;7.61085266081969e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.64330713120092e-05!GO:0051789;response to protein stimulus;7.64892557206087e-05!GO:0006986;response to unfolded protein;7.64892557206087e-05!GO:0031410;cytoplasmic vesicle;8.83225397734915e-05!GO:0009060;aerobic respiration;9.83209546820299e-05!GO:0042254;ribosome biogenesis and assembly;9.83209546820299e-05!GO:0031988;membrane-bound vesicle;0.000110228178486418!GO:0001816;cytokine production;0.000115263392187545!GO:0008632;apoptotic program;0.000125773461121009!GO:0006401;RNA catabolic process;0.000128460910725402!GO:0030120;vesicle coat;0.00013580055188358!GO:0030662;coated vesicle membrane;0.00013580055188358!GO:0003697;single-stranded DNA binding;0.000147875626627214!GO:0051168;nuclear export;0.000162192084789074!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000204729024565858!GO:0006897;endocytosis;0.000204729024565858!GO:0010324;membrane invagination;0.000204729024565858!GO:0043492;ATPase activity, coupled to movement of substances;0.000207354323368769!GO:0045892;negative regulation of transcription, DNA-dependent;0.000213817353345486!GO:0006350;transcription;0.000226917503995931!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0002304169087943!GO:0005761;mitochondrial ribosome;0.000234207736910569!GO:0000313;organellar ribosome;0.000234207736910569!GO:0006818;hydrogen transport;0.000259440546180411!GO:0000245;spliceosome assembly;0.000266350137802433!GO:0051276;chromosome organization and biogenesis;0.000270836318535931!GO:0045333;cellular respiration;0.000285670330969266!GO:0051427;hormone receptor binding;0.000299006096579069!GO:0030097;hemopoiesis;0.000299088813817714!GO:0009719;response to endogenous stimulus;0.000299759725200463!GO:0005885;Arp2/3 protein complex;0.000300932845376888!GO:0007034;vacuolar transport;0.000301875251540036!GO:0022890;inorganic cation transmembrane transporter activity;0.000301875251540036!GO:0032940;secretion by cell;0.000309685802714438!GO:0008186;RNA-dependent ATPase activity;0.00032272066287446!GO:0016023;cytoplasmic membrane-bound vesicle;0.000331330611088533!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000335631382548683!GO:0006952;defense response;0.000343592792809807!GO:0004674;protein serine/threonine kinase activity;0.000355945293616432!GO:0015992;proton transport;0.000371656483467033!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000385206018819707!GO:0007041;lysosomal transport;0.000402145285118676!GO:0007050;cell cycle arrest;0.000402145285118676!GO:0005057;receptor signaling protein activity;0.000419145059254077!GO:0000151;ubiquitin ligase complex;0.000435336107443432!GO:0035257;nuclear hormone receptor binding;0.000447739277295114!GO:0009117;nucleotide metabolic process;0.000454842456305301!GO:0046822;regulation of nucleocytoplasmic transport;0.00046519926509367!GO:0005769;early endosome;0.000467858312594008!GO:0006402;mRNA catabolic process;0.000467858312594008!GO:0051338;regulation of transferase activity;0.000474069369400339!GO:0007005;mitochondrion organization and biogenesis;0.000483369066602266!GO:0005798;Golgi-associated vesicle;0.000483745753423207!GO:0007265;Ras protein signal transduction;0.000497496738767377!GO:0009893;positive regulation of metabolic process;0.000519358215541845!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000523842194033979!GO:0045321;leukocyte activation;0.000604977472169868!GO:0046519;sphingoid metabolic process;0.000617594153255512!GO:0016740;transferase activity;0.000633056905837375!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000671949588375929!GO:0008654;phospholipid biosynthetic process;0.000684001859764243!GO:0043549;regulation of kinase activity;0.000842763143491914!GO:0006399;tRNA metabolic process;0.000856090941503177!GO:0006612;protein targeting to membrane;0.00085688236170877!GO:0004004;ATP-dependent RNA helicase activity;0.000883911332334803!GO:0006672;ceramide metabolic process;0.000945042936986631!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000950267805433461!GO:0007040;lysosome organization and biogenesis;0.000970223394369913!GO:0005667;transcription factor complex;0.00101235672839451!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00101932527926554!GO:0004812;aminoacyl-tRNA ligase activity;0.00101932527926554!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00101932527926554!GO:0046983;protein dimerization activity;0.00110175457888512!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00110750409278363!GO:0045859;regulation of protein kinase activity;0.00110880666905553!GO:0016779;nucleotidyltransferase activity;0.00110880666905553!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00114704312439013!GO:0001726;ruffle;0.0011974530534537!GO:0007259;JAK-STAT cascade;0.00121609407016193!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00123343364609559!GO:0044431;Golgi apparatus part;0.00126990283393961!GO:0030149;sphingolipid catabolic process;0.00132100411873976!GO:0003729;mRNA binding;0.00141522439242674!GO:0043038;amino acid activation;0.00142422469882441!GO:0006418;tRNA aminoacylation for protein translation;0.00142422469882441!GO:0043039;tRNA aminoacylation;0.00142422469882441!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00147307709840152!GO:0065004;protein-DNA complex assembly;0.00150118238222828!GO:0043087;regulation of GTPase activity;0.00176788344781567!GO:0005637;nuclear inner membrane;0.0018448197303526!GO:0045893;positive regulation of transcription, DNA-dependent;0.00186180672471261!GO:0006352;transcription initiation;0.0018643551113195!GO:0006919;caspase activation;0.0019017134156271!GO:0051223;regulation of protein transport;0.00191126772821967!GO:0007033;vacuole organization and biogenesis;0.00191767140514432!GO:0005099;Ras GTPase activator activity;0.00198222627368297!GO:0016251;general RNA polymerase II transcription factor activity;0.00207595251363942!GO:0033116;ER-Golgi intermediate compartment membrane;0.00208677084513547!GO:0002521;leukocyte differentiation;0.00217449217258199!GO:0045941;positive regulation of transcription;0.00235907604879379!GO:0033157;regulation of intracellular protein transport;0.00245264933162836!GO:0042306;regulation of protein import into nucleus;0.00245264933162836!GO:0002757;immune response-activating signal transduction;0.00250004975781828!GO:0009611;response to wounding;0.00252977159030736!GO:0031072;heat shock protein binding;0.00256371605187939!GO:0018193;peptidyl-amino acid modification;0.00270268470248992!GO:0016072;rRNA metabolic process;0.00280842361476757!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00288867290587052!GO:0043281;regulation of caspase activity;0.00288867290587052!GO:0006099;tricarboxylic acid cycle;0.00288867290587052!GO:0046356;acetyl-CoA catabolic process;0.00288867290587052!GO:0044262;cellular carbohydrate metabolic process;0.00300784745978822!GO:0005741;mitochondrial outer membrane;0.00311122177078059!GO:0045637;regulation of myeloid cell differentiation;0.00312377207663759!GO:0051090;regulation of transcription factor activity;0.00312810272430719!GO:0002274;myeloid leukocyte activation;0.00320449496744759!GO:0006364;rRNA processing;0.00325370183898549!GO:0004197;cysteine-type endopeptidase activity;0.00349551056122109!GO:0043280;positive regulation of caspase activity;0.00351141325169051!GO:0009165;nucleotide biosynthetic process;0.00361083947514754!GO:0006643;membrane lipid metabolic process;0.00367062039928587!GO:0051187;cofactor catabolic process;0.00373923024788403!GO:0002252;immune effector process;0.00393846497992053!GO:0002520;immune system development;0.00400013080986572!GO:0043021;ribonucleoprotein binding;0.00404809597235342!GO:0031325;positive regulation of cellular metabolic process;0.00436169147630336!GO:0043085;positive regulation of catalytic activity;0.00444402285589645!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0045451857993841!GO:0043623;cellular protein complex assembly;0.00461685875458351!GO:0003702;RNA polymerase II transcription factor activity;0.00463713296816574!GO:0022415;viral reproductive process;0.00479034795185332!GO:0006351;transcription, DNA-dependent;0.0052049829724166!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00520515165045862!GO:0032774;RNA biosynthetic process;0.00534185286692365!GO:0002764;immune response-regulating signal transduction;0.00536262738051782!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0053719691049666!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00549527143927128!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00549527143927128!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00549527143927128!GO:0048534;hemopoietic or lymphoid organ development;0.00576070170109186!GO:0060090;molecular adaptor activity;0.00584807051498152!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0059348177977901!GO:0016301;kinase activity;0.00595981722438203!GO:0045454;cell redox homeostasis;0.00615496452789253!GO:0006891;intra-Golgi vesicle-mediated transport;0.00618394419413898!GO:0006091;generation of precursor metabolites and energy;0.00623790965695632!GO:0019377;glycolipid catabolic process;0.00628395481367236!GO:0006084;acetyl-CoA metabolic process;0.00629949099586413!GO:0042990;regulation of transcription factor import into nucleus;0.00635355910682221!GO:0042991;transcription factor import into nucleus;0.00635355910682221!GO:0045045;secretory pathway;0.00657268346078239!GO:0005813;centrosome;0.00669804260548132!GO:0046966;thyroid hormone receptor binding;0.00720089742810413!GO:0006468;protein amino acid phosphorylation;0.00726520332043716!GO:0003725;double-stranded RNA binding;0.00738731123278036!GO:0016363;nuclear matrix;0.00741710968776301!GO:0030036;actin cytoskeleton organization and biogenesis;0.00743334258840411!GO:0046649;lymphocyte activation;0.00765206385625086!GO:0031901;early endosome membrane;0.00779466953744108!GO:0004185;serine carboxypeptidase activity;0.00786842919898125!GO:0006607;NLS-bearing substrate import into nucleus;0.00816311599903839!GO:0045449;regulation of transcription;0.00817253294325866!GO:0002250;adaptive immune response;0.00873387931420948!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00873387931420948!GO:0031968;organelle outer membrane;0.0089486234556809!GO:0009109;coenzyme catabolic process;0.00919096406067138!GO:0048487;beta-tubulin binding;0.00920443554705121!GO:0043433;negative regulation of transcription factor activity;0.00929605513897097!GO:0048471;perinuclear region of cytoplasm;0.00965461871601269!GO:0019867;outer membrane;0.0100157050702632!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0106193041254939!GO:0030693;caspase activity;0.0106193041254939!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0106193041254939!GO:0048500;signal recognition particle;0.0107465168103415!GO:0005484;SNAP receptor activity;0.0108750397201824!GO:0042110;T cell activation;0.0108947264599993!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0111551219438273!GO:0030218;erythrocyte differentiation;0.0114500339859718!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0114555355495769!GO:0001775;cell activation;0.0116998500463995!GO:0031625;ubiquitin protein ligase binding;0.0120090361240215!GO:0033367;protein localization in mast cell secretory granule;0.0120090361240215!GO:0033365;protein localization in organelle;0.0120090361240215!GO:0033371;T cell secretory granule organization and biogenesis;0.0120090361240215!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0120090361240215!GO:0033375;protease localization in T cell secretory granule;0.0120090361240215!GO:0042629;mast cell granule;0.0120090361240215!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0120090361240215!GO:0033364;mast cell secretory granule organization and biogenesis;0.0120090361240215!GO:0033380;granzyme B localization in T cell secretory granule;0.0120090361240215!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0120090361240215!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0120090361240215!GO:0033368;protease localization in mast cell secretory granule;0.0120090361240215!GO:0033366;protein localization in secretory granule;0.0120090361240215!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0120090361240215!GO:0033374;protein localization in T cell secretory granule;0.0120090361240215!GO:0003690;double-stranded DNA binding;0.0125539725062512!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0125539725062512!GO:0000209;protein polyubiquitination;0.0125539725062512!GO:0006611;protein export from nucleus;0.0131693576081884!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0131926305256802!GO:0045047;protein targeting to ER;0.0131926305256802!GO:0032318;regulation of Ras GTPase activity;0.0132836764873409!GO:0002440;production of molecular mediator of immune response;0.0133353812349714!GO:0001817;regulation of cytokine production;0.0135879655250655!GO:0051098;regulation of binding;0.0137841812366863!GO:0046479;glycosphingolipid catabolic process;0.0149321898261851!GO:0032763;regulation of mast cell cytokine production;0.0149884568360289!GO:0032762;mast cell cytokine production;0.0149884568360289!GO:0006458;'de novo' protein folding;0.0150588910831139!GO:0051084;'de novo' posttranslational protein folding;0.0150588910831139!GO:0019882;antigen processing and presentation;0.015231729042684!GO:0000082;G1/S transition of mitotic cell cycle;0.0153502072582244!GO:0030867;rough endoplasmic reticulum membrane;0.0154855199915757!GO:0045792;negative regulation of cell size;0.0155102623788076!GO:0002467;germinal center formation;0.015584962076019!GO:0008383;manganese superoxide dismutase activity;0.0158333002716241!GO:0001315;age-dependent response to reactive oxygen species;0.0158333002716241!GO:0019883;antigen processing and presentation of endogenous antigen;0.0161721220234964!GO:0046466;membrane lipid catabolic process;0.0163214269158405!GO:0019079;viral genome replication;0.0167461008458471!GO:0006333;chromatin assembly or disassembly;0.0167461008458471!GO:0032386;regulation of intracellular transport;0.0167806703670723!GO:0048146;positive regulation of fibroblast proliferation;0.0170045488256098!GO:0000139;Golgi membrane;0.0173074172995782!GO:0000339;RNA cap binding;0.0185522346870854!GO:0019220;regulation of phosphate metabolic process;0.0189462176875275!GO:0051174;regulation of phosphorus metabolic process;0.0189462176875275!GO:0051345;positive regulation of hydrolase activity;0.0191345368207109!GO:0030308;negative regulation of cell growth;0.0191345368207109!GO:0033673;negative regulation of kinase activity;0.019238313250078!GO:0006469;negative regulation of protein kinase activity;0.019238313250078!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0194652708116943!GO:0005815;microtubule organizing center;0.0195852678907762!GO:0008312;7S RNA binding;0.0197807590882474!GO:0019318;hexose metabolic process;0.0199035857165477!GO:0030127;COPII vesicle coat;0.020309242314467!GO:0012507;ER to Golgi transport vesicle membrane;0.020309242314467!GO:0017091;AU-rich element binding;0.0205065014171349!GO:0050779;RNA destabilization;0.0205065014171349!GO:0000289;poly(A) tail shortening;0.0205065014171349!GO:0001819;positive regulation of cytokine production;0.0208845008868051!GO:0006665;sphingolipid metabolic process;0.0211406454660138!GO:0030521;androgen receptor signaling pathway;0.0211717324020502!GO:0046467;membrane lipid biosynthetic process;0.0213546695874021!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0213969118876973!GO:0008333;endosome to lysosome transport;0.0214230554957403!GO:0030176;integral to endoplasmic reticulum membrane;0.0214230554957403!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0214292041960401!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0214292041960401!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0214445686248086!GO:0002237;response to molecule of bacterial origin;0.0215315039109137!GO:0019904;protein domain specific binding;0.0216198749456107!GO:0051348;negative regulation of transferase activity;0.0222567314133699!GO:0030224;monocyte differentiation;0.0223150468883084!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0223364046839694!GO:0043022;ribosome binding;0.0223364046839694!GO:0006650;glycerophospholipid metabolic process;0.0224491141111998!GO:0048144;fibroblast proliferation;0.0225792550330741!GO:0048145;regulation of fibroblast proliferation;0.0225792550330741!GO:0002443;leukocyte mediated immunity;0.0225792550330741!GO:0030134;ER to Golgi transport vesicle;0.022760949927542!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0228265026450656!GO:0019210;kinase inhibitor activity;0.0228879738050176!GO:0006749;glutathione metabolic process;0.022930511672539!GO:0003727;single-stranded RNA binding;0.0233858798079358!GO:0002224;toll-like receptor signaling pathway;0.0234162881233972!GO:0002221;pattern recognition receptor signaling pathway;0.0234162881233972!GO:0051059;NF-kappaB binding;0.0234269117389463!GO:0030663;COPI coated vesicle membrane;0.0235001179326313!GO:0030126;COPI vesicle coat;0.0235001179326313!GO:0030041;actin filament polymerization;0.0238191149515874!GO:0005996;monosaccharide metabolic process;0.0239088999096844!GO:0019843;rRNA binding;0.0239088999096844!GO:0004860;protein kinase inhibitor activity;0.0242055262070952!GO:0030133;transport vesicle;0.0244068516942149!GO:0000278;mitotic cell cycle;0.0244923683776004!GO:0019783;small conjugating protein-specific protease activity;0.0245144511855825!GO:0048002;antigen processing and presentation of peptide antigen;0.024578449061709!GO:0050811;GABA receptor binding;0.0246380473103246!GO:0006414;translational elongation;0.0250700198621306!GO:0051252;regulation of RNA metabolic process;0.0255194375542888!GO:0030518;steroid hormone receptor signaling pathway;0.0257173029710723!GO:0043300;regulation of leukocyte degranulation;0.0258840535942765!GO:0030118;clathrin coat;0.0258977691893305!GO:0030384;phosphoinositide metabolic process;0.0262381834181207!GO:0015036;disulfide oxidoreductase activity;0.0264494109371493!GO:0000785;chromatin;0.0268550943353216!GO:0030503;regulation of cell redox homeostasis;0.0268550943353216!GO:0006260;DNA replication;0.0269205891426805!GO:0030658;transport vesicle membrane;0.0283380916933197!GO:0046979;TAP2 binding;0.0283839899551404!GO:0046977;TAP binding;0.0283839899551404!GO:0046978;TAP1 binding;0.0283839899551404!GO:0005152;interleukin-1 receptor antagonist activity;0.0288659823226992!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0288659823226992!GO:0008139;nuclear localization sequence binding;0.0289525954156108!GO:0042802;identical protein binding;0.0298943920996233!GO:0030137;COPI-coated vesicle;0.029896131811872!GO:0015923;mannosidase activity;0.0300124494356393!GO:0006007;glucose catabolic process;0.0303298909782779!GO:0051092;activation of NF-kappaB transcription factor;0.0306116225760308!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0306777957238357!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0306953399155968!GO:0002819;regulation of adaptive immune response;0.0306953399155968!GO:0004843;ubiquitin-specific protease activity;0.0307124995636399!GO:0005048;signal sequence binding;0.0308197306018351!GO:0008629;induction of apoptosis by intracellular signals;0.0308350920399785!GO:0043621;protein self-association;0.0312123174188705!GO:0030029;actin filament-based process;0.0312174577159868!GO:0051056;regulation of small GTPase mediated signal transduction;0.0314620547970967!GO:0005669;transcription factor TFIID complex;0.0314813727968698!GO:0008637;apoptotic mitochondrial changes;0.031582983902326!GO:0002682;regulation of immune system process;0.0316859609404995!GO:0006405;RNA export from nucleus;0.0316859609404995!GO:0051329;interphase of mitotic cell cycle;0.0317374791396984!GO:0045639;positive regulation of myeloid cell differentiation;0.031778187696193!GO:0004177;aminopeptidase activity;0.0332408517460084!GO:0008361;regulation of cell size;0.0334943609876052!GO:0002684;positive regulation of immune system process;0.0336189166612666!GO:0042613;MHC class II protein complex;0.0336189166612666!GO:0051247;positive regulation of protein metabolic process;0.0339956363402465!GO:0000287;magnesium ion binding;0.0341663364694421!GO:0046578;regulation of Ras protein signal transduction;0.0341737976405758!GO:0008538;proteasome activator activity;0.0343041004789418!GO:0033033;negative regulation of myeloid cell apoptosis;0.0343214771544498!GO:0001803;regulation of type III hypersensitivity;0.0343214771544498!GO:0032733;positive regulation of interleukin-10 production;0.0343214771544498!GO:0033025;regulation of mast cell apoptosis;0.0343214771544498!GO:0001805;positive regulation of type III hypersensitivity;0.0343214771544498!GO:0033023;mast cell homeostasis;0.0343214771544498!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0343214771544498!GO:0033032;regulation of myeloid cell apoptosis;0.0343214771544498!GO:0001802;type III hypersensitivity;0.0343214771544498!GO:0033028;myeloid cell apoptosis;0.0343214771544498!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0343214771544498!GO:0033026;negative regulation of mast cell apoptosis;0.0343214771544498!GO:0033024;mast cell apoptosis;0.0343214771544498!GO:0032760;positive regulation of tumor necrosis factor production;0.0343690322907378!GO:0030258;lipid modification;0.0344162227451096!GO:0002573;myeloid leukocyte differentiation;0.0345063443940664!GO:0005684;U2-dependent spliceosome;0.0345760391636591!GO:0008270;zinc ion binding;0.0346505674674658!GO:0051101;regulation of DNA binding;0.0349531922182926!GO:0045113;regulation of integrin biosynthetic process;0.0350980425401201!GO:0045112;integrin biosynthetic process;0.0350980425401201!GO:0005070;SH3/SH2 adaptor activity;0.0352416314418047!GO:0000118;histone deacetylase complex;0.0352823021599017!GO:0002444;myeloid leukocyte mediated immunity;0.0359714578316784!GO:0051325;interphase;0.0359743857100181!GO:0030027;lamellipodium;0.0361078131178495!GO:0030100;regulation of endocytosis;0.0363345660005096!GO:0051540;metal cluster binding;0.0368874241307068!GO:0051536;iron-sulfur cluster binding;0.0368874241307068!GO:0050851;antigen receptor-mediated signaling pathway;0.0377357710998107!GO:0000738;DNA catabolic process, exonucleolytic;0.0382892908884!GO:0006354;RNA elongation;0.0383352384434555!GO:0006310;DNA recombination;0.0385007483238785!GO:0006355;regulation of transcription, DNA-dependent;0.038540547298283!GO:0000049;tRNA binding;0.0389383583524038!GO:0045926;negative regulation of growth;0.03933829020754!GO:0051085;chaperone cofactor-dependent protein folding;0.0394292367557044!GO:0017166;vinculin binding;0.039462337937118!GO:0051052;regulation of DNA metabolic process;0.0395890924295664!GO:0019901;protein kinase binding;0.0396472501609554!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0400850602529713!GO:0006465;signal peptide processing;0.0426697502033316!GO:0045576;mast cell activation;0.0429048547920591!GO:0006383;transcription from RNA polymerase III promoter;0.0429095114375827!GO:0006516;glycoprotein catabolic process;0.0429701978627468!GO:0006644;phospholipid metabolic process;0.0430183352663224!GO:0030660;Golgi-associated vesicle membrane;0.0434001262436166!GO:0050778;positive regulation of immune response;0.0434001262436166!GO:0002697;regulation of immune effector process;0.0442056792770932!GO:0005869;dynactin complex;0.0442066730390309!GO:0006261;DNA-dependent DNA replication;0.0442149907974118!GO:0042611;MHC protein complex;0.0448812328340907!GO:0046483;heterocycle metabolic process;0.0451931760824514!GO:0030433;ER-associated protein catabolic process;0.0457465605710416!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0457465605710416!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0457465605710416!GO:0050900;leukocyte migration;0.0457465605710416!GO:0006302;double-strand break repair;0.0458473837724245!GO:0043488;regulation of mRNA stability;0.0458473837724245!GO:0043487;regulation of RNA stability;0.0458473837724245!GO:0015980;energy derivation by oxidation of organic compounds;0.0461733522994726!GO:0008286;insulin receptor signaling pathway;0.0469924739864216!GO:0006689;ganglioside catabolic process;0.0473484515378965!GO:0051087;chaperone binding;0.0477262848860872!GO:0016408;C-acyltransferase activity;0.0479202188223808!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0479340540765896!GO:0030119;AP-type membrane coat adaptor complex;0.0480517971365164!GO:0000165;MAPKKK cascade;0.0484509683819182!GO:0046426;negative regulation of JAK-STAT cascade;0.0485402843816195!GO:0007162;negative regulation of cell adhesion;0.0499787758072664
|sample_id=11882
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=STAT5{A,B}:6.4778905873;STAT2,4,6:6.18003354626;FOSL2:5.68475478136;NFE2:5.07418563657;NFE2L2:4.92608854988;IRF7:4.81004172826;FOS_FOS{B,L1}_JUN{B,D}:4.73581582326;STAT1,3:4.62069053389;BACH2:4.62043352693;CEBPA,B_DDIT3:4.47472844592;HLF:4.42770105917;IRF1,2:4.19418545682;PAX2:4.02341808358;SREBF1,2:3.93978759112;NFIL3:3.87857229212;SPIB:3.66939531573;NANOG{mouse}:3.46590544287;FOXP3:3.27679368413;EP300:3.18952935985;ETS1,2:3.18640964356;SPI1:3.17019994955;ATF5_CREB3:3.04396449788;ATF4:3.0131838366;ATF6:2.83404035249;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.75049993097;RUNX1..3:2.54821383184;CREB1:2.45593627345;NFKB1_REL_RELA:2.43689819303;DMAP1_NCOR{1,2}_SMARC:2.40266324466;NFE2L1:2.35154590997;JUN:2.34461682581;FOXN1:2.28708612509;HSF1,2:2.14592278594;ATF2:2.01978377796;NR1H4:2.01921598157;TGIF1:1.91632007638;ELF1,2,4:1.88756779092;NFATC1..3:1.83632871687;PAX8:1.69628302426;CDX1,2,4:1.69166229746;MAFB:1.66529876111;ALX4:1.43093483608;HIF1A:1.40958194676;XBP1:1.16504370257;ESRRA:1.00530842989;PPARG:1.00308625958;HOX{A5,B5}:0.896510947241;FOXO1,3,4:0.883670602934;PAX3,7:0.877027328195;HMGA1,2:0.847940571652;SRF:0.801737180141;HMX1:0.708658474131;NR6A1:0.703710720642;RBPJ:0.689122985042;TLX2:0.675675639561;PDX1:0.346761146536;RXRA_VDR{dimer}:0.237615033898;AHR_ARNT_ARNT2:0.215820079799;HBP1_HMGB_SSRP1_UBTF:0.215500583079;MEF2{A,B,C,D}:0.177118641754;FOX{D1,D2}:0.127888329344;RFX2..5_RFXANK_RFXAP:0.109526968289;TBP:0.0862365649116;EN1,2:0.0805365195745;ZBTB16:-0.00196934644258;HES1:-0.0189193879791;GLI1..3:-0.0451781266749;NANOG:-0.0637804648499;HOXA9_MEIS1:-0.0673229839486;VSX1,2:-0.0740021941491;IKZF1:-0.124521553361;PRDM1:-0.155040955455;FOX{F1,F2,J1}:-0.192544245967;PAX1,9:-0.247331391485;MYB:-0.248420100651;SMAD1..7,9:-0.351468541445;BPTF:-0.485483116838;TAL1_TCF{3,4,12}:-0.504015233848;GATA4:-0.541670450417;SPZ1:-0.543914764868;POU2F1..3:-0.556445425214;TFCP2:-0.62041605585;SOX2:-0.637678912146;IKZF2:-0.646286281023;EGR1..3:-0.650360042523;OCT4_SOX2{dimer}:-0.651714146448;RFX1:-0.667530554048;ALX1:-0.701986943786;ESR1:-0.702305754454;RORA:-0.717085254571;FOXM1:-0.720459322967;RXR{A,B,G}:-0.7408856019;MZF1:-0.884877899508;NR3C1:-0.903109268723;ZNF238:-0.911223517263;POU5F1:-0.9220143359;REST:-0.955372809262;TEF:-0.956891224557;PAX6:-1.01268772082;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.08641823173;PRRX1,2:-1.09565679651;HOX{A6,A7,B6,B7}:-1.10321289638;NHLH1,2:-1.1130685305;HNF4A_NR2F1,2:-1.17669786013;DBP:-1.1820967348;TFAP4:-1.30099449882;GATA6:-1.31329431424;PAX4:-1.32652533767;HNF1A:-1.34054429842;PITX1..3:-1.35450354899;NKX3-2:-1.36033088742;SP1:-1.36734696146;MYFfamily:-1.41550026709;FOXA2:-1.49296104248;T:-1.49782392334;NKX2-1,4:-1.53249363383;GZF1:-1.53333921792;NKX2-3_NKX2-5:-1.53583716646;MYBL2:-1.54680819866;MED-1{core}:-1.57461313773;ELK1,4_GABP{A,B1}:-1.64022437706;E2F1..5:-1.65844582205;MAZ:-1.67385863921;FOXD3:-1.68481792687;NKX3-1:-1.69357588298;SOX5:-1.69667639246;MTE{core}:-1.70761806418;PATZ1:-1.71974157644;FOXP1:-1.74753763033;FOXL1:-1.75107963456;BREu{core}:-1.75668355864;ZBTB6:-1.76596853366;ZFP161:-1.78561704767;GTF2A1,2:-1.83213723969;ZEB1:-1.83899788664;PBX1:-1.85057839815;TLX1..3_NFIC{dimer}:-1.864079678;TEAD1:-1.87403757887;NKX6-1,2:-1.88035947205;MTF1:-1.90169372163;TFAP2B:-1.90462713506;MYOD1:-1.91596758743;SOX{8,9,10}:-1.92372476803;NKX2-2,8:-1.93301225368;GTF2I:-1.94026561365;NFIX:-1.9436964971;TFDP1:-1.9467777022;NFY{A,B,C}:-1.96732226117;ZNF384:-1.9741130265;CUX2:-1.99954590224;TP53:-2.00023871472;bHLH_family:-2.0287643705;SNAI1..3:-2.05498146476;GFI1B:-2.09230535503;CRX:-2.1006812634;ZNF148:-2.11465644708;XCPE1{core}:-2.12179443406;RREB1:-2.1708848995;POU1F1:-2.20559867105;FOX{I1,J2}:-2.23430108284;GCM1,2:-2.23772564304;HOX{A4,D4}:-2.27839766419;KLF4:-2.28531811769;ADNP_IRX_SIX_ZHX:-2.36492436375;POU6F1:-2.4415709138;NR5A1,2:-2.44963770794;TFAP2{A,C}:-2.45325138394;ZIC1..3:-2.45648304246;HIC1:-2.50765496035;FOXQ1:-2.51884688272;AIRE:-2.5336462081;EBF1:-2.58618125974;TBX4,5:-2.59811245558;POU3F1..4:-2.6851618924;UFEwm:-2.70009674542;PAX5:-2.7235714827;LMO2:-2.74412163745;SOX17:-2.80132367263;NRF1:-2.81770113123;GFI1:-2.85381813876;YY1:-2.92227237643;CDC5L:-3.03996837192;EVI1:-3.04544475684;ONECUT1,2:-3.05086252764;TOPORS:-3.14312602983;HAND1,2:-3.15728499315;ARID5B:-3.19576223013;AR:-3.29502608571;ZNF423:-3.43113006672;ZNF143:-3.44537929126;LHX3,4:-3.57740578857;LEF1_TCF7_TCF7L1,2:-3.76420964446
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11882-125D1;search_select_hide=table117:FF:11882-125D1
}}
}}

Latest revision as of 18:26, 4 June 2020

Name:CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3
Species:Human (Homo sapiens)
Library ID:CNhs13544
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexfemale
age21
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD5-3
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005810
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13544 CAGE DRX008158 DRR009030
Accession ID Hg19

Library idBAMCTSS
CNhs13544 DRZ000455 DRZ001840
Accession ID Hg38

Library idBAMCTSS
CNhs13544 DRZ011805 DRZ013190
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.606
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.151
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.53
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.44
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0854
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0854
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.157
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.651
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0854
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.667
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.401
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0.0854
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.441
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.457
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.141
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.793
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.157
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.457
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.147
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.319
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0854
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.00565
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.23
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.882
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.557
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.826
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.629
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.629
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.951
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.557
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.319
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.62
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.402
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.863
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.544
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.773
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.796
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.362
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.837
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.218
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.401
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.606
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.218
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.401
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.272
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.793
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast1.005
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.157
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.218
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.471
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.319
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13544

Jaspar motifP-value
MA0002.26.60303e-10
MA0003.10.622
MA0004.10.111
MA0006.10.634
MA0007.10.839
MA0009.10.594
MA0014.10.453
MA0017.10.0978
MA0018.20.0378
MA0019.10.95
MA0024.10.00368
MA0025.16.34924e-4
MA0027.10.806
MA0028.10.456
MA0029.10.174
MA0030.10.444
MA0031.10.63
MA0035.20.247
MA0038.10.582
MA0039.20.63
MA0040.10.186
MA0041.10.619
MA0042.10.913
MA0043.13.64922e-8
MA0046.10.029
MA0047.20.777
MA0048.10.733
MA0050.11.71127e-16
MA0051.14.40764e-10
MA0052.10.0144
MA0055.10.633
MA0057.10.575
MA0058.10.0171
MA0059.10.0647
MA0060.11.26747e-6
MA0061.17.29259e-9
MA0062.20.058
MA0065.20.0114
MA0066.10.0307
MA0067.12.29024e-7
MA0068.10.763
MA0069.10.493
MA0070.10.0271
MA0071.10.44
MA0072.10.71
MA0073.10.376
MA0074.10.156
MA0076.10.524
MA0077.10.139
MA0078.10.492
MA0079.20.251
MA0080.21.53982e-12
MA0081.12.81828e-4
MA0083.10.347
MA0084.10.794
MA0087.10.99
MA0088.10.747
MA0090.10.33
MA0091.10.733
MA0092.10.334
MA0093.10.128
MA0099.24.07564e-45
MA0100.10.974
MA0101.12.32834e-8
MA0102.29.63961e-8
MA0103.10.0983
MA0104.20.132
MA0105.11.66105e-12
MA0106.10.773
MA0107.16.87709e-10
MA0108.20.47
MA0111.10.666
MA0112.28.98939e-5
MA0113.10.708
MA0114.10.223
MA0115.10.562
MA0116.14.73235e-4
MA0117.10.0286
MA0119.10.236
MA0122.10.712
MA0124.10.416
MA0125.10.31
MA0131.10.545
MA0135.10.612
MA0136.15.41319e-15
MA0137.21.24682e-13
MA0138.20.293
MA0139.10.964
MA0140.10.242
MA0141.10.14
MA0142.10.8
MA0143.10.989
MA0144.17.55928e-6
MA0145.10.451
MA0146.10.327
MA0147.10.253
MA0148.10.992
MA0149.10.262
MA0150.18.12196e-23
MA0152.10.736
MA0153.10.00696
MA0154.10.00128
MA0155.10.952
MA0156.11.50628e-11
MA0157.10.78
MA0159.10.0228
MA0160.10.0237
MA0162.10.7
MA0163.14.97154e-7
MA0164.10.694
MA0258.10.00894
MA0259.10.876



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13544

Novel motifP-value
10.0925
100.0203
1000.903
1010.753
1020.96
1030.345
1040.53
1050.152
1060.0016
1070.381
1080.7
1090.225
110.199
1100.131
1110.073
1120.363
1130.591
1140.0244
1150.197
1160.927
1170.0687
1180.204
1190.181
120.293
1200.481
1210.408
1220.546
1230.518
1240.868
1250.47
1260.213
1270.42
1280.0609
1290.458
130.0766
1300.268
1310.988
1320.0496
1330.803
1340.734
1350.522
1360.993
1370.013
1380.306
1390.0861
140.491
1400.498
1410.26
1420.0663
1430.0323
1440.724
1450.414
1460.737
1470.512
1480.0261
1490.884
150.161
1500.419
1510.381
1520.292
1530.899
1540.609
1550.816
1560.39
1570.753
1580.0364
1590.168
160.358
1600.511
1610.527
1620.159
1630.161
1640.15
1650.195
1660.523
1670.156
1680.165
1690.0121
170.324
180.187
190.491
20.511
200.243
210.655
220.287
230.0597
240.293
250.329
260.0716
270.651
280.448
290.192
30.194
300.509
310.821
320.507
330.232
340.716
350.198
360.0808
370.0699
380.443
390.971
40.845
400.206
410.0121
420.429
430.0314
440.769
450.87
460.212
470.609
480.535
490.171
50.267
500.891
510.503
520.481
530.605
540.427
550.71
560.764
570.946
580.163
590.375
60.837
600.0696
610.782
620.0796
630.647
640.434
650.298
660.373
670.56
680.937
690.452
70.245
700.0538
710.0307
720.171
730.168
740.0875
750.116
760.229
770.697
780.114
790.733
80.504
800.151
810.408
820.29
830.00571
840.42
850.0405
860.0582
870.493
880.587
890.232
90.452
900.101
910.312
920.317
930.244
940.0739
950.337
960.619
970.714
980.194
990.0282



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13544


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000631 (trehalose dimycolate (TDM) treatment sample)
0011444 (CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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