FFCP PHASE1:Mm9::chr1:129574500..129574533,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72160 | |EntrezGene=72160 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C996 | |UniProt=Q8C996 | ||
|association_with_transcript=64bp_to_NM_028135,uc007cku.1,uc011wqz.1_5end | |||
|cluster_id=chr1:129574500..129574533,- | |||
|description=CAGE_peak_2_at_Tmem163_5end | |||
|id=chr1:129574500..129574533,- | |||
|ontology_enrichment_celltype=CL:0000117!4.76e-15!23;CL:0000337!4.76e-15!23;CL:0000540!8.16e-09!33;CL:0000047!8.16e-09!33;CL:0000031!8.16e-09!33;CL:0000404!8.16e-09!33;CL:0000221!5.34e-08!44;CL:0000133!5.34e-08!44;CL:0002319!5.71e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.85e-18,23;CL:0000337,9.85e-18,23;CL:0000540,1.40e-10,33;CL:0000047,1.40e-10,33;CL:0000031,1.40e-10,33;CL:0000404,1.40e-10,33;CL:0002319,1.15e-08,43;CL:0000221,2.45e-08,44;CL:0000133,2.45e-08,44;CL:0000393,4.09e-08,39;CL:0000211,4.09e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-18!52;UBERON:0005068!1.40e-18!52;UBERON:0006241!1.40e-18!52;UBERON:0007135!1.40e-18!52;UBERON:0000033!1.66e-18!63;UBERON:0000073!3.54e-18!75;UBERON:0001016!3.54e-18!75;UBERON:0001017!3.61e-18!73;UBERON:0005743!3.61e-18!73;UBERON:0000955!1.65e-16!50;UBERON:0006238!1.65e-16!50;UBERON:0002616!8.66e-16!49;UBERON:0002346!2.23e-15!71;UBERON:0003075!2.23e-15!71;UBERON:0007284!2.23e-15!71;UBERON:0003056!1.37e-14!49;UBERON:0004121!1.66e-14!102;UBERON:0000924!1.66e-14!102;UBERON:0006601!1.66e-14!102;UBERON:0002020!9.55e-13!34;UBERON:0003080!1.33e-12!40;UBERON:0002780!5.59e-12!39;UBERON:0001890!5.59e-12!39;UBERON:0006240!5.59e-12!39;UBERON:0002791!3.71e-09!29;UBERON:0003528!3.71e-09!29;UBERON:0001893!3.71e-09!29;UBERON:0007811!3.98e-09!86;UBERON:0000025!1.50e-08!114;UBERON:0000153!4.94e-08!94;UBERON:0004111!7.97e-08!122;UBERON:0003076!5.50e-07!12;UBERON:0003057!5.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.46e-16,73;UBERON:0000073,8.38e-16,54;UBERON:0001016,3.39e-15,75;UBERON:0001049,2.07e-13,52;UBERON:0005068,2.07e-13,52;UBERON:0006241,2.07e-13,52;UBERON:0007135,2.07e-13,52;UBERON:0002346,5.91e-13,64;UBERON:0003075,5.91e-13,64;UBERON:0007284,5.91e-13,64;UBERON:0004121,6.96e-13,95;UBERON:0000924,6.96e-13,95;UBERON:0006601,6.96e-13,95;UBERON:0010371,3.15e-10,73;UBERON:0002020,4.23e-10,34;UBERON:0000955,4.31e-10,47;UBERON:0006238,4.31e-10,47;UBERON:0002616,2.85e-09,46;UBERON:0003076,1.32e-08,12;UBERON:0003057,1.32e-08,12;UBERON:0010314,1.55e-08,92;UBERON:0001948,2.95e-08,5;UBERON:0002315,2.95e-08,5;UBERON:0003056,7.08e-08,49;UBERON:0003080,3.62e-07,40;UBERON:0002240,9.85e-07,6;UBERON:0005174,9.85e-07,6;UBERON:0001137,9.85e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0.335565212115473,0,0,0,0,0,19.8270131642406,24.3335850465135,19.6487735086916,0.338844532069132,1.77858959222228,0,0,0,2.09720077362883,1.15265491596466,0.933206510776299,0.675029691658453,1.26194976810829,14.2825492201902,9.718215801871,0.734944795289724,0.670918297127655,2.75765635983006,1.10115880999389,1.40456071893706,1.53606533256243,16.4857859662742,15.8273623432169,13.5437476344758,1.3959149950069,1.68828783009504,1.68078072554491,13.5529149317887,11.5321061447273,13.7935589910722,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.39665023047716,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,2.49345653471472,2.92034273521964,0,0.248813941220186,0,0,0.390361328888111,0.919608417733892,1.0803727788321,0.30140963567143,1.49680298132921,1.5373646434182,1.87403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,3.10688658803253,1.87620847984877,2.70093092191522,0.946978942340841,0.590292695242212,0.308534225774757,0.697601834251224,0.804820204198858,0.350296027101508,0,0,0.243206428637567,0,0.219550115291051,0.134206418760372,0,3.60166143327496,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,1.75400245523236,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.776152102696527,0.428674070063185,0.709360934569094,1.42695054081656,1.97458824722545,0.913394847343798,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,3.43737308063638,1.54667864109319,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,1.66059756134683,2.79317411380722,2.56100408631201,1.45864030240976,0.628839487883947,2.94149613520023,2.00022055021454,1.64828045791115,1.28367683836726,2.02157769411038,0.50695859978048,1.88626341386076,0.842773567228942,1.28050304809739,1.66562859971278,0.952587382566147,1.15884325944855,1.15745532278223,0.824171801606613,0.883193520806384,2.05721551431249,1.77475806159337,0.715308569841963,1.59881058295561,1.69396884747595,1.77690676572521,1.09756783723664,1.05227884575137,1.08643291076689,3.36685362994643,1.66089025373844,1.97008964751127,1.22769312950907,2.01417893541756,0.964533054905707,5.24602213669686,0.701794825336225,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0.335565212115473,0,0,0,0,0,19.8270131642406,24.3335850465135,19.6487735086916,0.338844532069132,1.77858959222228,0,0,0,2.09720077362883,1.15265491596466,0.933206510776299,0.675029691658453,1.26194976810829,14.2825492201902,9.718215801871,0.734944795289724,0.670918297127655,2.75765635983006,1.10115880999389,1.40456071893706,1.53606533256243,16.4857859662742,15.8273623432169,13.5437476344758,1.3959149950069,1.68828783009504,1.68078072554491,13.5529149317887,11.5321061447273,13.7935589910722,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,2.34224637609238,4.81727425670947,0,0,0,0,2.39665023047716,0.457500602818626,0.879580464790051,0.521472960576829,1.02286182932132,2.49345653471472,2.92034273521964,0,0.248813941220186,0,0,0.390361328888111,0.919608417733892,1.0803727788321,0.30140963567143,1.49680298132921,1.5373646434182,1.87403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,3.10688658803253,1.87620847984877,2.70093092191522,0.946978942340841,0.590292695242212,0.308534225774757,0.697601834251224,0.804820204198858,0.350296027101508,0,0,0.243206428637567,0,0.219550115291051,0.134206418760372,0,3.60166143327496,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.44292937929755,1.75400245523236,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,3.53453448063988,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.776152102696527,0.428674070063185,0.709360934569094,1.42695054081656,1.97458824722545,0.913394847343798,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,3.43737308063638,1.54667864109319,0.685082519770642,0,0,1.80128481289688,0.453142408984205,0.51776031175182,1.66059756134683,2.79317411380722,2.56100408631201,1.45864030240976,0.628839487883947,2.94149613520023,2.00022055021454,1.64828045791115,1.28367683836726,2.02157769411038,0.50695859978048,1.88626341386076,0.842773567228942,1.28050304809739,1.66562859971278,0.952587382566147,1.15884325944855,1.15745532278223,0.824171801606613,0.883193520806384,2.05721551431249,1.77475806159337,0.715308569841963,1.59881058295561,1.69396884747595,1.77690676572521,1.09756783723664,1.05227884575137,1.08643291076689,3.36685362994643,1.66089025373844,1.97008964751127,1.22769312950907,2.01417893541756,0.964533054905707,5.24602213669686,0.701794825336225,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421 | ||
|short_description=p2@Tmem163 | |||
}} | }} |
Latest revision as of 07:18, 26 September 2015
Short description: | p2@Tmem163 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem163_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 64bp_to_NM_028135, uc007cku.1, uc011wqz.1_5end |
EntrezGene: | Tmem163 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.85e-18 | 23 |
neuroblast (sensu Vertebrata) | 9.85e-18 | 23 |
neuron | 1.40e-10 | 33 |
neuronal stem cell | 1.40e-10 | 33 |
neuroblast | 1.40e-10 | 33 |
electrically signaling cell | 1.40e-10 | 33 |
neural cell | 1.15e-08 | 43 |
ectodermal cell | 2.45e-08 | 44 |
neurectodermal cell | 2.45e-08 | 44 |
electrically responsive cell | 4.09e-08 | 39 |
electrically active cell | 4.09e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.46e-16 | 73 |
regional part of nervous system | 8.38e-16 | 54 |
nervous system | 3.39e-15 | 75 |
neural tube | 2.07e-13 | 52 |
neural rod | 2.07e-13 | 52 |
future spinal cord | 2.07e-13 | 52 |
neural keel | 2.07e-13 | 52 |
neurectoderm | 5.91e-13 | 64 |
neural plate | 5.91e-13 | 64 |
presumptive neural plate | 5.91e-13 | 64 |
ectoderm-derived structure | 6.96e-13 | 95 |
ectoderm | 6.96e-13 | 95 |
presumptive ectoderm | 6.96e-13 | 95 |
ecto-epithelium | 3.15e-10 | 73 |
gray matter | 4.23e-10 | 34 |
brain | 4.31e-10 | 47 |
future brain | 4.31e-10 | 47 |
regional part of brain | 2.85e-09 | 46 |
posterior neural tube | 1.32e-08 | 12 |
chordal neural plate | 1.32e-08 | 12 |
structure with developmental contribution from neural crest | 1.55e-08 | 92 |
regional part of spinal cord | 2.95e-08 | 5 |
gray matter of spinal cord | 2.95e-08 | 5 |
pre-chordal neural plate | 7.08e-08 | 49 |
anterior neural tube | 3.62e-07 | 40 |
spinal cord | 9.85e-07 | 6 |
dorsal region element | 9.85e-07 | 6 |
dorsum | 9.85e-07 | 6 |