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{{f5samples
{{f5samples
|id=FF:10828-111C9
|DRA_sample_Accession=CAGE@SAMD00005964
|name=acute myeloid leukemia (FAB M1) cell line:HYT-1
|accession_numbers=CAGE;DRX007802;DRR008674;DRZ000099;DRZ001484;DRZ011449;DRZ012834
|sample_id=10828
|ancestors_in_anatomy_facet=
|rna_tube_id=111C9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
|rna_box=111
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|rna_position=C9
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0101883,FF:0100740
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB1297
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr6:135502501..135502546,+!p1@MYB!2.02!123.41!MYB;;chr1:25291475..25291511,-!p2@RUNX3!2.01!102.24!RUNX3;;chr11:47400078..47400106,-!p1@SPI1!1.94!86.15!SPI1;;chr2:68592406..68592424,+!p1@PLEK!1.94!85.30!PLEK;;chr21:39870339..39870443,-!p1@ERG!1.88!74.30!ERG;;chr9:135854091..135854159,+!p1@GFI1B!1.79!60.96!GFI1B;;chr7:115670804..115670825,-!p1@TFEC!1.77!57.58!TFEC;;chr7:50344289..50344323,+!p1@IKZF1!1.75!54.61!IKZF1;;chr12:54694758..54694805,-!p1@NFE2!1.74!64.98!NFE2;;chr4:81118647..81118666,+!p1@PRDM8!1.72!67.52!PRDM8;;chr2:172967621..172967637,-!p1@DLX2!1.67!117.69!DLX2;;chr12:96588368..96588394,+!p3@ELK3!1.66!116.00!ELK3;;chr2:172949484..172949522,+!p1@DLX1!1.65!43.18!DLX1;;chr2:16080659..16080685,+!p1@MYCN!1.64!42.55!MYCN;;chr4:57522598..57522664,-!p3@HOPX!1.64!42.55!HOPX;;chr7:137620650..137620677,-!p3@CREB3L2!1.64!42.33!CREB3L2;;chr4:57522513..57522548,-!p4@HOPX!1.63!41.28!HOPX;;chr19:13213662..13213686,-!p1@LYL1!1.62!59.90!LYL1;;chr7:27205136..27205164,-!p1@HOXA9!1.62!40.22!HOXA9;;chr20:31350184..31350200,+!p1@DNMT3B!1.61!79.80!DNMT3B;;chr19:13213511..13213545,-!p2@LYL1!1.56!37.89!LYL1;;chr6:135502408..135502459,+!p2@MYB!1.51!36.41!MYB;;chr20:50159198..50159299,-!p1@NFATC2!1.50!43.82!NFATC2;;chr12:54778471..54778528,-!p1@ZNF385A!1.49!30.06!ZNF385A;;chr7:27196217..27196246,-!p2@HOXA7!1.49!29.85!HOXA7;;chr14:75988771..75988826,+!p1@BATF!1.47!37.68!BATF;;chrY:21906594..21906622,-!p1@KDM5D!1.45!27.31!KDM5D;;chr10:94449703..94449718,+!p1@HHEX!1.44!99.06!HHEX;;chr7:63505799..63505904,+!p1@ZNF727!1.44!26.67!ZNF727;;chr7:27192185..27192209,-!p1@HOXA3!1.43!26.04!HOXA3;;chr7:50348268..50348366,+!p4@IKZF1!1.43!25.61!IKZF1;;chr2:68592394..68592405,+!p2@PLEK!1.41!24.98!PLEK;;chr2:60780607..60780624,-!p2@BCL11A!1.39!70.28!BCL11A;;chr4:57522674..57522699,-!p5@HOPX!1.37!22.23!HOPX;;chr7:137620684..137620711,-!p4@CREB3L2!1.36!21.80!CREB3L2;;chr1:25256756..25256774,-!p1@RUNX3!1.31!36.41!RUNX3;;chr3:128206762..128206781,-!p2@GATA2!1.30!115.79!GATA2;;chr1:92951607..92951661,-!p1@GFI1!1.30!18.84!GFI1;;chr7:50344251..50344288,+!p3@IKZF1!1.28!18.20!IKZF1;;chr6:144385698..144385742,-!p2@PLAGL1!1.26!20.96!PLAGL1;;chr7:27205106..27205134,-!p2@HOXA9!1.26!17.36!HOXA9;;chr17:46667594..46667619,-!p1@HOXB3!1.25!16.93!HOXB3;;chr12:54694807..54694832,-!p3@NFE2!1.24!16.51!NFE2;;chr4:57522166..57522260,-!p2@HOPX!1.21!17.36!HOPX;;chr11:47399996..47400014,-!p4@SPI1!1.21!15.24!SPI1;;chr18:55102598..55102623,+!p1@ONECUT2!1.17!13.76!ONECUT2;;chr13:41593425..41593480,-!p1@ELF1!1.16!84.46!ELF1;;chr2:60781201..60781258,-!p3@BCL11A!1.16!13.55!BCL11A;;chr5:88178983..88179012,-!p1@MEF2C!1.15!101.60!MEF2C;;chr7:149470641..149470694,-!p1@ZNF467!1.15!58.63!ZNF467;;chr5:88179195..88179224,-!p3@MEF2C!1.15!20.74!MEF2C;;chr1:25291620..25291635,-!p4@RUNX3!1.14!12.91!RUNX3;;chr14:75988831..75988847,+!p2@BATF!1.14!12.70!BATF;;chr19:50432453..50432468,+!p1@ATF5!1.13!687.09!ATF5;;chr11:32457075..32457095,-!p1@WT1!1.13!12.49!WT1;;chr15:67391010..67391046,+!p13@SMAD3!1.13!12.49!SMAD3;;chr2:60780753..60780800,-!p1@BCL11A!1.12!59.69!BCL11A;;chr8:60031619..60031676,-!p1@TOX!1.11!25.61!TOX;;chr5:321810..321877,+!p1@AHRR!1.10!36.83!AHRR;;chr19:22235279..22235301,+!p1@ZNF257!1.10!22.01!ZNF257;;chr20:62680984..62680999,-!p1@SOX18!1.10!15.24!SOX18;;chr18:55102628..55102646,+!p2@ONECUT2!1.10!11.64!ONECUT2;;chr2:185463247..185463263,+!p1@ZNF804A!1.09!20.32!ZNF804A;;chr6:126102292..126102329,+!p3@NCOA7!1.07!35.56!NCOA7;;chr8:60031563..60031574,-!p7@TOX!1.07!10.80!TOX;;chr11:128563948..128564003,+!p1@FLI1!1.06!127.22!FLI1;;chr18:22932080..22932170,-!p1@ZNF521!1.06!45.30!ZNF521;;chr1:47697539..47697573,-!p3@TAL1!1.06!10.37!TAL1;;chr1:158978768..158978800,+!p8@IFI16!1.05!10.16!IFI16;;chr19:33793430..33793447,-!p1@CEBPA!1.04!42.33!CEBPA;;chr19:53758058..53758088,-!p2@ZNF677!1.03!32.60!ZNF677;;chr2:16082155..16082169,+!p3@MYCN!1.03!9.74!MYCN;;chr12:54694653..54694672,-!p2@NFE2!1.03!9.74!NFE2;;chr19:22817119..22817145,+!p1@ZNF492!1.02!15.88!ZNF492;;chr6:45296048..45296082,+!p1@RUNX2!1.02!11.01!RUNX2;;chr19:20278012..20278034,+!p1@ZNF486!1.01!78.32!ZNF486;;chr19:45579725..45579743,-!p1@ZNF296!1.01!42.55!ZNF296;;chr19:12203100..12203132,+!p1@ZNF788!1.01!18.84!ZNF788;;chr3:71355163..71355209,-!p5@FOXP1!1.01!12.91!FOXP1;;chr19:20188776..20188826,+!p1@ZNF90!1.00!24.98!ZNF90;;chr19:9609272..9609297,-!p1@ZNF560!1.00!9.10!ZNF560;;chr19:53466067..53466087,-!p3@ZNF321P,p3@ZNF816-ZNF321P,p3@ZNF816!0.99!13.55!ZNF816;;chr1:2985760..2985774,+!p1@PRDM16!0.99!8.68!PRDM16;;chr19:22605136..22605154,-!p1@ZNF98!0.99!8.68!ZNF98;;chr3:141747459..141747475,-!p1@TFDP2!0.98!73.03!TFDP2;;chr10:94449675..94449694,+!p2@HHEX!0.98!23.50!HHEX;;chr18:45457909..45457939,-!p8@SMAD2!0.98!10.80!SMAD2;;chr21:40032884..40032915,-!p2@ERG!0.98!8.47!ERG;;chr7:27224842..27224872,-!p1@HOXA11!0.98!8.47!HOXA11;;chr7:50343634..50343717,+!p2@IKZF1!0.98!8.47!IKZF1;;chr21:47063625..47063658,+!p1@PCBP3!0.97!37.68!PCBP3;;chr1:23696308..23696339,-!p2@ZNF436!0.96!17.78!ZNF436;;chr1:23696448..23696453,-!p5@ZNF436!0.96!10.16!ZNF436;;chr2:113977697..113977733,-!p6@PAX8!0.96!8.04!PAX8;;chr11:47399947..47399961,-!p3@SPI1!0.96!8.04!SPI1;;chr18:45457423..45457468,-!p5@SMAD2!0.95!30.06!SMAD2;;chr19:22034809..22034878,-!p2@ZNF43!0.95!28.58!ZNF43;;chr19:20011775..20011800,+!p2@ZNF93!0.95!14.39!ZNF93;;chr19:20011744..20011770,+!p1@ZNF93!0.94!30.90!ZNF93;;chr12:66218255..66218304,+!p3@HMGA2!0.94!21.38!HMGA2;;chr11:32457103..32457123,-!p3@WT1!0.94!7.62!WT1;;chr17:46667628..46667642,-!p2@HOXB3!0.94!7.62!HOXB3;;chr12:11802547..11802560,+!p5@ETV6!0.92!10.37!ETV6;;chr21:36421535..36421610,-!p2@RUNX1!0.91!26.46!RUNX1;;chr17:41622925..41622976,-!p3@ETV4!0.91!10.80!ETV4;;chr11:47400062..47400077,-!p2@SPI1!0.91!7.20!SPI1;;chr3:114819101..114819121,-!p7@ZBTB20!0.91!7.20!ZBTB20;;chr19:58400372..58400411,-!p1@ZNF814!0.90!37.68!ZNF814;;chr6:135502472..135502489,+!p3@MYB!0.90!6.99!MYB;;chr19:24097706..24097731,+!p2@ZNF726!0.88!13.12!ZNF726;;chr19:12163769..12163798,-!p1@ZNF878!0.88!8.68!ZNF878;;chr19:22605097..22605121,-!p2@ZNF98!0.88!6.56!ZNF98;;chrY:21906761..21906810,-!p2@KDM5D!0.88!6.56!KDM5D;;chr9:135853402..135853417,+!p4@GFI1B!0.88!6.56!GFI1B;;chr19:23433144..23433204,-!p1@ZNF724P!0.87!30.06!ZNF724P;;chr19:11959532..11959593,+!p1@ZNF439!0.87!26.04!ZNF439;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.87!14.61!SOHLH2;;chr5:124082580..124082603,-!p4@ZNF608!0.87!7.41!ZNF608;;chr17:41623692..41623715,-!p1@ETV4!0.86!27.94!ETV4;;chr5:88179017..88179046,-!p2@MEF2C!0.86!26.25!MEF2C;;chr5:76383070..76383117,-!p3@ZBED3!0.85!12.91!ZBED3;;chr12:66218836..66218888,+!p1@HMGA2!0.84!59.27!HMGA2;;chr17:40440481..40440550,+!p1@STAT5A!0.84!45.72!STAT5A;;chr9:117150254..117150271,-!p1@AKNA!0.84!17.15!AKNA;;chr15:41913690..41913753,+!p2@MGA!0.84!15.03!MGA;;chr2:70314240..70314256,+!p4@PCBP1!0.84!12.70!PCBP1;;chr19:52956798..52956843,+!p1@ZNF578!0.84!12.28!ZNF578;;chr19:47538560..47538591,+!p2@NPAS1!0.84!5.93!NPAS1;;chr1:92949331..92949377,-!p2@GFI1!0.84!5.93!GFI1;;chr15:90544182..90544195,+!p7@ZNF710!0.84!5.93!ZNF710;;chr19:13213555..13213568,-!p5@LYL1!0.84!5.93!LYL1;;chrY:2803415..2803468,+!p1@ZFY!0.84!5.93!ZFY;;chr7:27224795..27224840,-!p2@HOXA11!0.84!5.93!HOXA11;;chr11:47400045..47400060,-!p6@SPI1!0.84!5.93!SPI1;;chr15:66994663..66994680,+!p1@SMAD6!0.83!14.39!SMAD6;;chr19:53039233..53039247,+!p2@ZNF808!0.83!8.89!ZNF808;;chr3:63953435..63953499,+!p1@ATXN7!0.83!5.72!ATXN7;;chr2:70142232..70142251,+!p1@MXD1!0.82!34.08!MXD1;;chr6:126102254..126102289,+!p5@NCOA7!0.82!16.51!NCOA7;;chr2:219524193..219524205,-!p3@ZNF142!0.82!6.77!ZNF142;;chr4:124374..124410,+!p2@ZNF718!0.81!61.60!ZNF718;;chr14:89628064..89628109,-!p4@FOXN3!0.81!11.85!FOXN3;;chr3:18486354..18486377,-!p2@SATB1!0.81!6.99!SATB1;;chr19:23299814..23299844,+!p1@ZNF730!0.81!6.77!ZNF730;;chr10:94451574..94451587,+!p6@HHEX!0.81!5.50!HHEX;;chr1:8877692..8877732,-!p1@RERE!0.80!46.36!RERE;;chr19:37997297..37997362,+!p3@ZNF793!0.80!8.89!ZNF793;;chr8:128747661..128747703,+!p6@MYC!0.80!7.41!MYC;;chr12:66218003..66218018,+!p9@HMGA2!0.80!6.56!HMGA2;;chr15:66994523..66994541,+!p5@SMAD6!0.80!5.29!SMAD6;;chr6:21593973..21593988,+!p1@SOX4!0.79!203.42!SOX4;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.79!53.77!ZNF595;;chr16:68119324..68119364,+!p1@NFATC3!0.79!24.98!NFATC3;;chr19:53445819..53445860,-!p2@ZNF321P,p2@ZNF816-ZNF321P,p2@ZNF816!0.79!16.72!ZNF321P;;chr22:38597987..38598021,+!p2@MAFF!0.78!33.23!MAFF;;chr1:153940354..153940395,+!p1@CREB3L4!0.78!22.01!CREB3L4;;chr19:58095501..58095535,+!p1@ZIK1!0.78!18.84!ZIK1;;chr7:64126535..64126559,+!p2@ZNF107!0.78!11.43!ZNF107;;chr19:23941647..23941672,-!p2@ZNF681!0.78!8.68!ZNF681;;chr6:15401104..15401166,+!p5@JARID2!0.78!5.08!JARID2;;chr12:54694738..54694749,-!p5@NFE2!0.78!5.08!NFE2;;chr1:202777535..202777556,-!p1@KDM5B!0.77!179.50!KDM5B;;chr7:64838786..64838809,+!p2@ZNF92!0.77!30.27!ZNF92;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.77!22.23!ZNF816;;chr6:20402102..20402152,+!p1@E2F3!0.77!21.59!E2F3;;chr1:158985493..158985535,+!p4@IFI16!0.77!7.83!IFI16;;chr1:2985726..2985752,+!p2@PRDM16!0.77!4.87!PRDM16;;chr14:65568389..65568408,-!p4@MAX!0.77!4.87!MAX;;chr2:16081912..16081931,+!p2@MYCN!0.77!4.87!MYCN;;chr2:172950227..172950249,+!p2@DLX1!0.77!4.87!DLX1;;chr6:135516909..135516925,+!p6@MYB!0.77!4.87!MYB;;chr7:27213893..27213954,-!p1@HOXA10!0.77!4.87!HOXA10;;chr19:19976683..19976709,+!p1@ZNF253!0.76!23.07!ZNF253;;chr19:24097675..24097699,+!p1@ZNF726!0.76!16.93!ZNF726;;chr19:36391434..36391450,-!p1@NFKBID!0.76!9.95!NFKBID;;chr19:58400344..58400364,-!p2@ZNF814!0.76!7.20!ZNF814;;chr18:77155922..77155939,+!p1@NFATC1!0.75!13.76!NFATC1;;chr17:41622765..41622821,-!p2@ETV4!0.75!7.41!ETV4;;chr2:60778035..60778060,-!p4@BCL11A!0.75!5.72!BCL11A;;chr2:63277948..63277974,+!p1@OTX1!0.75!4.66!OTX1;;chr4:57522476..57522500,-!p7@HOPX!0.75!4.66!HOPX;;chr4:57522701..57522712,-!p10@HOPX!0.75!4.66!HOPX;;chr19:52531600..52531685,-!p1@ZNF614!0.74!45.93!ZNF614;;chr18:72922743..72922761,+!p3@TSHZ1!0.74!16.30!TSHZ1;;chr14:74353454..74353469,+!p4@ZNF410!0.74!9.31!ZNF410;;chr7:64254834..64254854,+!p2@ZNF138!0.74!8.68!ZNF138;;chr8:128747757..128747800,+!p7@MYC!0.74!6.35!MYC;;chr17:46622440..46622477,-!p5@HOXB2!0.74!5.08!HOXB2;;chr11:47400032..47400043,-!p5@SPI1!0.74!4.45!SPI1;;chr21:36421347..36421380,-!p8@RUNX1!0.74!4.45!RUNX1;;chr19:58011258..58011317,+!p1@ZNF773!0.73!37.04!ZNF773;;chr15:66994561..66994597,+!p2@SMAD6!0.73!11.43!SMAD6;;chr7:64023410..64023428,-!p2@ZNF680!0.73!7.20!ZNF680;;chr19:50435736..50435781,+!p3@ATF5!0.73!6.35!ATF5;;chr2:97202480..97202499,+!p1@ARID5A!0.72!48.90!ARID5A;;chr19:21950362..21950388,-!p1@ZNF100!0.72!43.18!ZNF100;;chrX:129244454..129244488,-!p1@ELF4!0.72!34.50!ELF4;;chr19:57999101..57999158,+!p1@ZNF419!0.72!32.39!ZNF419;;chr14:74226961..74227020,-!p1@C14orf43!0.72!31.12!C14orf43;;chr1:10754477..10754517,-!p1@CASZ1!0.72!7.41!CASZ1;;chr1:47695003..47695042,-!p2@TAL1!0.72!4.23!TAL1;;chr6:135516978..135516993,+!p7@MYB!0.72!4.23!MYB;;chr12:57917037..57917052,+!p9@MBD6!0.72!4.23!MBD6;;chr1:156470515..156470542,-!p2@MEF2D!0.71!23.92!MEF2D;;chr19:57901326..57901385,+!p2@ZNF548!0.71!11.01!ZNF548;;chr19:37997812..37997866,+!p1@ZNF793!0.71!7.41!ZNF793;;chr19:58740266..58740297,+!p1@ZNF544!0.70!32.60!ZNF544;;chr10:97890311..97890324,+!p6@ZNF518A!0.70!5.08!ZNF518A;;chr1:26697243..26697258,-!p1@ZNF683!0.70!4.02!ZNF683;;chr6:135513595..135513617,+!p4@MYB!0.70!4.02!MYB;;chr16:31885093..31885165,+!p1@ZNF267!0.69!69.01!ZNF267;;chr19:58193338..58193386,+!p1@ZNF551,p2@ZNF776!0.69!21.59!ZNF551;;chr19:23869970..23869991,-!p1@ZNF675!0.69!16.72!ZNF675;;chr19:52074502..52074587,+!p1@ZNF175!0.69!15.88!ZNF175;;chr5:76383017..76383068,-!p1@ZBED3!0.69!15.88!ZBED3;;chr8:28748099..28748141,+!p2@HMBOX1!0.69!13.55!HMBOX1;;chr11:130184470..130184533,-!p2@ZBTB44!0.69!11.64!ZBTB44;;chr16:68118689..68118733,+!p3@NFATC3!0.69!10.80!NFATC3;;chr19:36909484..36909525,-!p2@ZFP82!0.69!8.26!ZFP82;;chr10:97889464..97889494,+!p3@ZNF518A!0.69!7.83!ZNF518A;;chr6:15246261..15246312,+!p1@JARID2!0.68!105.41!JARID2;;chr19:24269981..24270007,+!p2@ZNF254!0.68!27.52!ZNF254;;chr19:52643169..52643199,-!p1@ZNF616!0.68!25.19!ZNF616;;chr14:65569101..65569119,-!p3@MAX!0.68!13.34!MAX;;chr17:4890695..4890773,-!p2@CAMTA2!0.68!13.34!CAMTA2;;chr19:53636125..53636178,-!p1@ZNF415!0.68!11.85!ZNF415;;chr20:62462566..62462631,-!p1@ZBTB46!0.68!7.83!ZBTB46;;chr8:60031534..60031553,-!p8@TOX!0.68!3.81!TOX;;chr19:20748574..20748599,-!p1@ZNF737!0.67!25.19!ZNF737;;chr9:137217986..137218049,+!p3@RXRA!0.67!11.64!RXRA;;chr19:20959098..20959117,+!p1@ZNF66P!0.66!16.93!ZNF66P;;chr19:42636586..42636607,-!p1@POU2F2!0.66!11.01!POU2F2;;chr1:23857698..23857733,-!p1@E2F2!0.66!7.20!E2F2;;chr1:156470494..156470505,-!p3@MEF2D!0.66!5.50!MEF2D;;chr4:81104985..81105005,+!p4@PRDM8!0.66!4.45!PRDM8;;chr6:20402070..20402082,+!p5@E2F3!0.66!4.23!E2F3;;chr6:1612300..1612324,+!p3@FOXC1!0.66!3.60!FOXC1;;chr1:47697881..47697910,-!p4@TAL1!0.66!3.60!TAL1;;chr1:92950138..92950159,-!p4@GFI1!0.66!3.60!GFI1;;chr19:20278043..20278054,+!p2@ZNF486!0.66!3.60!ZNF486;;chr19:21106049..21106072,+!p1@ZNF85!0.65!22.01!ZNF85;;chr2:74730430..74730451,-!p1@LBX2!0.65!6.14!LBX2;;chr19:53496768..53496799,-!p1@ZNF702P!0.65!5.72!ZNF702P;;chr19:53496806..53496848,-!p2@ZNF702P!0.65!5.50!ZNF702P;;chr4:81104895..81104920,+!p2@PRDM8!0.65!5.50!PRDM8;;chr5:138609782..138609826,+!p5@MATR3!0.64!25.61!MATR3;;chr19:58694742..58694800,+!p2@ZNF274!0.64!15.88!ZNF274;;chr19:19496539..19496576,+!p8@GATAD2A!0.64!6.35!GATAD2A;;chr14:45722335..45722348,-!p3@MIS18BP1!0.64!6.35!MIS18BP1;;chr4:57774884..57774924,+!p4@REST!0.64!5.50!REST;;chr19:48774586..48774670,+!p1@ZNF114!0.64!4.45!ZNF114;;chr19:58545454..58545498,+!p1@ZSCAN1!0.64!3.39!ZSCAN1;;chr19:13213954..13214021,-!p4@LYL1!0.64!3.39!LYL1;;chr19:52408257..52408278,-!p1@ZNF649!0.63!25.19!ZNF649;;chr19:58951496..58951539,-!p1@ZNF132!0.63!8.68!ZNF132;;chr19:58383174..58383178,-!p3@ZNF814!0.63!3.81!ZNF814;;chr21:40177845..40177863,+!p1@ETS2!0.62!225.43!ETS2;;chr1:158979686..158979745,+!p1@IFI16!0.62!124.68!IFI16;;chr1:247267618..247267674,-!p1@ZNF669!0.62!29.63!ZNF669;;chr6:21597514..21597578,+!p4@SOX4!0.62!5.93!SOX4;;chr1:226595648..226595659,-!p3@PARP1!0.62!5.72!PARP1;;chr1:247171316..247171336,-!p3@ZNF695!0.62!5.08!ZNF695;;chr12:66218212..66218244,+!p5@HMGA2!0.62!4.87!HMGA2;;chr5:142782823..142782854,-!p3@NR3C1!0.62!4.87!NR3C1;;chr3:141747441..141747452,-!p4@TFDP2!0.62!4.66!TFDP2;;chr4:81105027..81105039,+!p3@PRDM8!0.62!3.81!PRDM8;;chrX:107019163..107019179,-!p7@TSC22D3!0.62!3.81!TSC22D3;;chr9:20621834..20621884,-!p5@MLLT3!0.62!3.18!MLLT3;;chr2:185463521..185463557,+!p3@ZNF804A!0.62!3.18!ZNF804A;;chr1:227751287..227751298,+!p2@ZNF678!0.62!3.18!ZNF678;;chr21:36421147..36421193,-!p10@RUNX1!0.62!3.18!RUNX1;;chr21:40032581..40032605,-!p4@ERG!0.62!3.18!ERG;;chr5:88120151..88120177,-!p6@MEF2C!0.62!3.18!MEF2C;;chr7:115670792..115670797,-!p2@TFEC!0.62!3.18!TFEC;;chr17:48072574..48072597,-!p1@DLX3!0.62!3.18!DLX3;;chr19:53400852..53400962,-!p1@ZNF320!0.61!36.83!ZNF320;;chr19:58790314..58790358,+!p1@ZNF8!0.61!27.94!ZNF8;;c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|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=62
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=1.47
|rna_od260/280=2.09
|sample_cell_type=myeloid progenitor cell
|sample_cell_line=HYT-1  
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=acute myeloid leukemia (FAB M1)
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=15
|rna_concentration=0.554
|sample_note=
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|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000763,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
|sample_description=
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
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|def=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M1%2529%2520cell%2520line%253aHYT-1.CNhs13054.10828-111C9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M1%2529%2520cell%2520line%253aHYT-1.CNhs13054.10828-111C9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M1%2529%2520cell%2520line%253aHYT-1.CNhs13054.10828-111C9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M1%2529%2520cell%2520line%253aHYT-1.CNhs13054.10828-111C9.hg38.nobarcode.ctss.bed.gz
|id=FF:10828-111C9
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|is_obsolete=
|library_id=CNhs13054
|library_id_phase_based=2:CNhs13054
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10828
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10828
|name=acute myeloid leukemia (FAB M1) cell line:HYT-1
|namespace=FANTOM5
|namespace=FANTOM5
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|rna_box=111
|rna_catalog_number=
|rna_concentration=0.554
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.47
|rna_od260/280=2.09
|rna_position=C9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=111C9
|rna_weight_ug=15
|sample_age=62
|sample_category=cell lines
|sample_cell_catalog=RCB1297
|sample_cell_line=HYT-1
|sample_cell_lot=
|sample_cell_type=myeloid progenitor cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=acute myeloid leukemia (FAB M1)
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.52577887200558e-253!GO:0043227;membrane-bound organelle;4.24632217837093e-230!GO:0043231;intracellular membrane-bound organelle;1.50791827138477e-229!GO:0043226;organelle;1.99319708305283e-214!GO:0043229;intracellular organelle;8.20629404730794e-214!GO:0005737;cytoplasm;3.68056208726357e-142!GO:0044422;organelle part;2.36589673793398e-132!GO:0044446;intracellular organelle part;6.94762500026881e-131!GO:0005634;nucleus;1.8680137000265e-127!GO:0044237;cellular metabolic process;1.43908841467498e-124!GO:0044238;primary metabolic process;1.16771865856162e-122!GO:0043170;macromolecule metabolic process;2.88435520488069e-114!GO:0044444;cytoplasmic part;3.20484244416064e-99!GO:0032991;macromolecular complex;2.39258497826509e-90!GO:0044428;nuclear part;7.89501461418399e-83!GO:0030529;ribonucleoprotein complex;4.09435388484334e-82!GO:0003723;RNA binding;2.61329444321759e-80!GO:0043283;biopolymer metabolic process;2.73770213490346e-80!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.90141389073255e-79!GO:0043233;organelle lumen;7.83630590005051e-78!GO:0031974;membrane-enclosed lumen;7.83630590005051e-78!GO:0010467;gene expression;3.11452987173006e-76!GO:0005739;mitochondrion;3.03787751435067e-59!GO:0005515;protein binding;5.6612707484262e-58!GO:0003676;nucleic acid binding;4.66817298668886e-56!GO:0006396;RNA processing;1.50996270147319e-55!GO:0031981;nuclear lumen;1.20368867400326e-51!GO:0006412;translation;1.17858094190533e-48!GO:0005840;ribosome;4.41718801192718e-45!GO:0016070;RNA metabolic process;5.0999203535842e-45!GO:0016071;mRNA metabolic process;9.91691722965486e-45!GO:0043234;protein complex;5.16647833139032e-44!GO:0019538;protein metabolic process;1.03509977652206e-42!GO:0006259;DNA metabolic process;4.97277175034795e-42!GO:0009058;biosynthetic process;5.97429545550664e-42!GO:0044267;cellular protein metabolic process;7.22841106699758e-40!GO:0044429;mitochondrial part;9.87807456928979e-40!GO:0044249;cellular biosynthetic process;1.7521355990297e-39!GO:0044260;cellular macromolecule metabolic process;2.03798158880441e-39!GO:0008380;RNA splicing;5.78969226445123e-39!GO:0003735;structural constituent of ribosome;6.00393684634683e-39!GO:0006397;mRNA processing;1.68016995632917e-38!GO:0031090;organelle membrane;2.07265123998379e-38!GO:0009059;macromolecule biosynthetic process;7.96445889261328e-38!GO:0033036;macromolecule localization;1.42061362563306e-37!GO:0016043;cellular component organization and biogenesis;4.76108780283778e-36!GO:0005829;cytosol;9.19966534599183e-36!GO:0031967;organelle envelope;1.17597814601459e-35!GO:0031975;envelope;2.45813281138002e-35!GO:0015031;protein transport;3.75667366098277e-35!GO:0033279;ribosomal subunit;1.88602536369192e-34!GO:0008104;protein localization;1.28611992373845e-33!GO:0045184;establishment of protein localization;4.92883962772582e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.83624949845891e-32!GO:0005654;nucleoplasm;4.66544879830907e-31!GO:0006996;organelle organization and biogenesis;5.98900252690991e-31!GO:0046907;intracellular transport;1.52410823447524e-30!GO:0065003;macromolecular complex assembly;4.90446863032299e-30!GO:0005681;spliceosome;7.20049683499099e-29!GO:0000166;nucleotide binding;1.34981748749088e-28!GO:0007049;cell cycle;2.01372969253905e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.12632863076263e-27!GO:0006886;intracellular protein transport;1.82464310345472e-26!GO:0022607;cellular component assembly;4.85906495288739e-26!GO:0043228;non-membrane-bound organelle;1.33031364198065e-25!GO:0043232;intracellular non-membrane-bound organelle;1.33031364198065e-25!GO:0044445;cytosolic part;2.16866305321039e-25!GO:0005740;mitochondrial envelope;1.64859265348805e-24!GO:0006974;response to DNA damage stimulus;2.2809585499864e-24!GO:0044451;nucleoplasm part;1.0830327469635e-23!GO:0019866;organelle inner membrane;4.23861803837857e-23!GO:0051649;establishment of cellular localization;6.59539973161893e-23!GO:0022402;cell cycle process;1.44950067933858e-22!GO:0031966;mitochondrial membrane;1.7981541897451e-22!GO:0051641;cellular localization;3.50383734128268e-22!GO:0005694;chromosome;5.68385387394215e-22!GO:0050794;regulation of cellular process;7.4857254070553e-21!GO:0032553;ribonucleotide binding;8.54337212151133e-21!GO:0032555;purine ribonucleotide binding;8.54337212151133e-21!GO:0005730;nucleolus;1.27425543137468e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.46577316765286e-20!GO:0051276;chromosome organization and biogenesis;1.62294136443171e-20!GO:0016462;pyrophosphatase activity;1.69726742125883e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.71424004967943e-20!GO:0005743;mitochondrial inner membrane;2.37325865611783e-20!GO:0017076;purine nucleotide binding;2.81631972767656e-20!GO:0006281;DNA repair;3.75316389879798e-20!GO:0017111;nucleoside-triphosphatase activity;3.93294883376148e-20!GO:0044427;chromosomal part;6.39517216233854e-20!GO:0022618;protein-RNA complex assembly;1.92793630522897e-19!GO:0006119;oxidative phosphorylation;2.13061974392376e-19!GO:0015935;small ribosomal subunit;5.03542242687873e-19!GO:0032559;adenyl ribonucleotide binding;5.10736392262642e-19!GO:0005524;ATP binding;5.117235719811e-19!GO:0019222;regulation of metabolic process;8.12967561078876e-19!GO:0000278;mitotic cell cycle;8.59875856540779e-19!GO:0006457;protein folding;1.44536610061193e-18!GO:0031980;mitochondrial lumen;2.05037311011889e-18!GO:0005759;mitochondrial matrix;2.05037311011889e-18!GO:0030554;adenyl nucleotide binding;2.8582374768503e-18!GO:0008134;transcription factor binding;9.35627375301032e-18!GO:0044455;mitochondrial membrane part;1.7024793195322e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;2.73865108605356e-17!GO:0016874;ligase activity;4.91419384010463e-17!GO:0009719;response to endogenous stimulus;4.92630232880694e-17!GO:0006323;DNA packaging;7.58017523925126e-17!GO:0044265;cellular macromolecule catabolic process;1.43771639149243e-16!GO:0006605;protein targeting;1.57566358192365e-16!GO:0031323;regulation of cellular metabolic process;1.67615303464748e-16!GO:0015934;large ribosomal subunit;2.74241957683871e-16!GO:0048770;pigment granule;5.11640472479578e-16!GO:0042470;melanosome;5.11640472479578e-16!GO:0012505;endomembrane system;7.05057848674467e-16!GO:0006512;ubiquitin cycle;1.13137633145379e-15!GO:0016887;ATPase activity;1.56607400806895e-15!GO:0042623;ATPase activity, coupled;1.87111571882121e-15!GO:0043412;biopolymer modification;1.93635870481599e-15!GO:0022403;cell cycle phase;2.02563418600407e-15!GO:0008135;translation factor activity, nucleic acid binding;2.05885955483852e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.08074078393315e-15!GO:0016604;nuclear body;3.06933401622383e-15!GO:0006350;transcription;6.06863056947962e-15!GO:0012501;programmed cell death;6.40585598541465e-15!GO:0006915;apoptosis;6.54054354378945e-15!GO:0050789;regulation of biological process;1.18605656128608e-14!GO:0006913;nucleocytoplasmic transport;1.51658899594901e-14!GO:0051169;nuclear transport;3.84772572175801e-14!GO:0044248;cellular catabolic process;4.15509541705741e-14!GO:0010468;regulation of gene expression;4.23340680086516e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.78833094264702e-14!GO:0000375;RNA splicing, via transesterification reactions;4.78833094264702e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.78833094264702e-14!GO:0051726;regulation of cell cycle;7.1678565965731e-14!GO:0042254;ribosome biogenesis and assembly;1.08700365685161e-13!GO:0006260;DNA replication;1.08891695431515e-13!GO:0008219;cell death;1.21848946230806e-13!GO:0016265;death;1.21848946230806e-13!GO:0005746;mitochondrial respiratory chain;1.30303244539021e-13!GO:0000785;chromatin;1.38990845411481e-13!GO:0000074;regulation of progression through cell cycle;1.39446673474788e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.34463456673489e-13!GO:0019941;modification-dependent protein catabolic process;2.54804849821266e-13!GO:0043632;modification-dependent macromolecule catabolic process;2.54804849821266e-13!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58599736519245e-13!GO:0044453;nuclear membrane part;2.75509102803148e-13!GO:0006511;ubiquitin-dependent protein catabolic process;3.18212298866238e-13!GO:0000087;M phase of mitotic cell cycle;3.25458884928554e-13!GO:0043285;biopolymer catabolic process;3.6663727487715e-13!GO:0009057;macromolecule catabolic process;4.5023482433842e-13!GO:0044257;cellular protein catabolic process;4.8693064325489e-13!GO:0006464;protein modification process;5.16820855085292e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.76952049305403e-13!GO:0007067;mitosis;8.42407818315646e-13!GO:0044432;endoplasmic reticulum part;1.15159394871014e-12!GO:0003743;translation initiation factor activity;1.1736338783616e-12!GO:0051082;unfolded protein binding;1.26827059317837e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.30585525991875e-12!GO:0016568;chromatin modification;1.71295276740408e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.71868088365236e-12!GO:0003954;NADH dehydrogenase activity;1.71868088365236e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.71868088365236e-12!GO:0051186;cofactor metabolic process;1.87697711948999e-12!GO:0005635;nuclear envelope;2.02376505689959e-12!GO:0031965;nuclear membrane;2.44668898911561e-12!GO:0006413;translational initiation;2.73232230312375e-12!GO:0032774;RNA biosynthetic process;2.94186780073351e-12!GO:0016607;nuclear speck;3.26502153257463e-12!GO:0017038;protein import;3.3092846815685e-12!GO:0051301;cell division;3.59097376820977e-12!GO:0006351;transcription, DNA-dependent;3.97936701762041e-12!GO:0003677;DNA binding;6.51516377567547e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.12881101432381e-11!GO:0043687;post-translational protein modification;1.22192899588681e-11!GO:0005783;endoplasmic reticulum;1.62487815102803e-11!GO:0005761;mitochondrial ribosome;3.00310605124829e-11!GO:0000313;organellar ribosome;3.00310605124829e-11!GO:0000279;M phase;3.19003246348497e-11!GO:0045449;regulation of transcription;3.60151814417125e-11!GO:0004386;helicase activity;4.46167469056935e-11!GO:0065007;biological regulation;5.04197282692243e-11!GO:0065004;protein-DNA complex assembly;6.19586610691112e-11!GO:0006446;regulation of translational initiation;6.71706196134336e-11!GO:0003712;transcription cofactor activity;7.08745422345902e-11!GO:0042775;organelle ATP synthesis coupled electron transport;7.86437528644016e-11!GO:0042773;ATP synthesis coupled electron transport;7.86437528644016e-11!GO:0006333;chromatin assembly or disassembly;9.95423451305968e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.95423451305968e-11!GO:0045271;respiratory chain complex I;9.95423451305968e-11!GO:0005747;mitochondrial respiratory chain complex I;9.95423451305968e-11!GO:0006732;coenzyme metabolic process;1.52216110985255e-10!GO:0006403;RNA localization;1.86104126232753e-10!GO:0005643;nuclear pore;2.05376269497826e-10!GO:0006399;tRNA metabolic process;2.24042435412091e-10!GO:0050657;nucleic acid transport;2.35308711503654e-10!GO:0051236;establishment of RNA localization;2.35308711503654e-10!GO:0050658;RNA transport;2.35308711503654e-10!GO:0048193;Golgi vesicle transport;2.50767877929684e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.57216390382397e-10!GO:0006163;purine nucleotide metabolic process;3.41555900348134e-10!GO:0006164;purine nucleotide biosynthetic process;4.09758447457138e-10!GO:0008026;ATP-dependent helicase activity;4.14139989565734e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.43595116100592e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.543749168715e-10!GO:0005789;endoplasmic reticulum membrane;1.14502389469279e-09!GO:0030163;protein catabolic process;1.15902974492687e-09!GO:0042981;regulation of apoptosis;1.19530129111751e-09!GO:0016192;vesicle-mediated transport;1.41680945866685e-09!GO:0006355;regulation of transcription, DNA-dependent;1.41680945866685e-09!GO:0051170;nuclear import;1.45929665686016e-09!GO:0006366;transcription from RNA polymerase II promoter;1.57326624948182e-09!GO:0043067;regulation of programmed cell death;1.81715839769769e-09!GO:0009259;ribonucleotide metabolic process;1.98087347313448e-09!GO:0009150;purine ribonucleotide metabolic process;2.51844794891195e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.04095370513243e-09!GO:0006793;phosphorus metabolic process;3.1219315870226e-09!GO:0006796;phosphate metabolic process;3.1219315870226e-09!GO:0016072;rRNA metabolic process;3.6598125793555e-09!GO:0006606;protein import into nucleus;4.27972728018876e-09!GO:0006364;rRNA processing;4.58913244475572e-09!GO:0065002;intracellular protein transport across a membrane;4.82495431025555e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.88190782536099e-09!GO:0008565;protein transporter activity;5.16652975392553e-09!GO:0009260;ribonucleotide biosynthetic process;5.68397264841352e-09!GO:0046930;pore complex;7.05028741584907e-09!GO:0043566;structure-specific DNA binding;7.71501728702518e-09!GO:0016310;phosphorylation;9.34031641111168e-09!GO:0009055;electron carrier activity;9.36455975806849e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.4641142617874e-09!GO:0051028;mRNA transport;9.89008108646896e-09!GO:0030532;small nuclear ribonucleoprotein complex;1.48909427668714e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.64014700185224e-08!GO:0019829;cation-transporting ATPase activity;1.82279257365328e-08!GO:0003697;single-stranded DNA binding;4.3003555606255e-08!GO:0015986;ATP synthesis coupled proton transport;5.05698146105316e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.05698146105316e-08!GO:0048523;negative regulation of cellular process;5.32644869368453e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.27195340626925e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.27195340626925e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.27195340626925e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.43987014512737e-08!GO:0006334;nucleosome assembly;8.88082940944882e-08!GO:0043038;amino acid activation;8.99722592216043e-08!GO:0006418;tRNA aminoacylation for protein translation;8.99722592216043e-08!GO:0043039;tRNA aminoacylation;8.99722592216043e-08!GO:0051329;interphase of mitotic cell cycle;1.00799653550746e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.20186627688664e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.27742696557852e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.27742696557852e-07!GO:0005794;Golgi apparatus;1.28452314023198e-07!GO:0031497;chromatin assembly;1.30745036741853e-07!GO:0051325;interphase;1.43518428050224e-07!GO:0009056;catabolic process;1.69072155518207e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.74153248119935e-07!GO:0009141;nucleoside triphosphate metabolic process;1.79560677023313e-07!GO:0008639;small protein conjugating enzyme activity;1.98260506643088e-07!GO:0016740;transferase activity;1.99618751846047e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.45565195637088e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.45565195637088e-07!GO:0051188;cofactor biosynthetic process;2.50288740451069e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.80434846264089e-07!GO:0006261;DNA-dependent DNA replication;2.84822195455389e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.21936513392824e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.21936513392824e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.21936513392824e-07!GO:0016779;nucleotidyltransferase activity;3.40510491385549e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.47498640490146e-07!GO:0006754;ATP biosynthetic process;3.68502263589219e-07!GO:0006753;nucleoside phosphate metabolic process;3.68502263589219e-07!GO:0009060;aerobic respiration;3.87108461887657e-07!GO:0004842;ubiquitin-protein ligase activity;3.96479016156401e-07!GO:0019899;enzyme binding;4.171301574256e-07!GO:0006752;group transfer coenzyme metabolic process;4.19616283093459e-07!GO:0003713;transcription coactivator activity;4.67532410359576e-07!GO:0051246;regulation of protein metabolic process;5.63524035124016e-07!GO:0043069;negative regulation of programmed cell death;6.45332242200426e-07!GO:0043066;negative regulation of apoptosis;6.90194312379838e-07!GO:0046034;ATP metabolic process;7.22685278163254e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.5875468423123e-07!GO:0007005;mitochondrion organization and biogenesis;7.7645292474393e-07!GO:0016564;transcription repressor activity;8.28521608593292e-07!GO:0006916;anti-apoptosis;9.06064945703606e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.84780529790328e-07!GO:0019787;small conjugating protein ligase activity;9.90140695851735e-07!GO:0048519;negative regulation of biological process;1.28947702040544e-06!GO:0000245;spliceosome assembly;1.32765576809751e-06!GO:0045786;negative regulation of progression through cell cycle;1.38089233898928e-06!GO:0006084;acetyl-CoA metabolic process;1.63327634664316e-06!GO:0016563;transcription activator activity;1.68399777724374e-06!GO:0006099;tricarboxylic acid cycle;1.69243077566692e-06!GO:0046356;acetyl-CoA catabolic process;1.69243077566692e-06!GO:0016363;nuclear matrix;2.08012686134844e-06!GO:0000075;cell cycle checkpoint;2.21539489689203e-06!GO:0009117;nucleotide metabolic process;2.37903004969312e-06!GO:0045333;cellular respiration;2.37903004969312e-06!GO:0016787;hydrolase activity;2.68110607775566e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.8894124857008e-06!GO:0005813;centrosome;2.93580836580661e-06!GO:0045259;proton-transporting ATP synthase complex;3.26331317563799e-06!GO:0005793;ER-Golgi intermediate compartment;3.33632663282495e-06!GO:0006461;protein complex assembly;3.65685609647986e-06!GO:0009108;coenzyme biosynthetic process;4.04845328262842e-06!GO:0009109;coenzyme catabolic process;4.12575545608631e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.94389431754956e-06!GO:0006950;response to stress;5.27776834349342e-06!GO:0007243;protein kinase cascade;5.99005053848111e-06!GO:0005815;microtubule organizing center;6.95941588993928e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;8.12190220420949e-06!GO:0015399;primary active transmembrane transporter activity;8.12190220420949e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.49035652500973e-06!GO:0051187;cofactor catabolic process;8.64033382807936e-06!GO:0003690;double-stranded DNA binding;8.64033382807936e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.01693455555092e-06!GO:0008270;zinc ion binding;9.19591937473995e-06!GO:0030120;vesicle coat;9.52035413297026e-06!GO:0030662;coated vesicle membrane;9.52035413297026e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.08939666840851e-05!GO:0006613;cotranslational protein targeting to membrane;1.09265611260279e-05!GO:0003724;RNA helicase activity;1.09498402439669e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.13519732198434e-05!GO:0016881;acid-amino acid ligase activity;1.14462441479085e-05!GO:0065009;regulation of a molecular function;1.33809976464539e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.37931534190042e-05!GO:0000775;chromosome, pericentric region;1.40163727034885e-05!GO:0015630;microtubule cytoskeleton;1.45587220406453e-05!GO:0032446;protein modification by small protein conjugation;1.68567906054435e-05!GO:0048475;coated membrane;1.71350678384177e-05!GO:0030117;membrane coat;1.71350678384177e-05!GO:0006310;DNA recombination;2.14308000086254e-05!GO:0005667;transcription factor complex;2.23767686252249e-05!GO:0005768;endosome;2.27477222119596e-05!GO:0005819;spindle;2.63171760182552e-05!GO:0003899;DNA-directed RNA polymerase activity;2.6629000680278e-05!GO:0031324;negative regulation of cellular metabolic process;2.74155502231826e-05!GO:0003729;mRNA binding;3.43708304033628e-05!GO:0016567;protein ubiquitination;3.86029818732623e-05!GO:0004298;threonine endopeptidase activity;5.25843465260296e-05!GO:0051168;nuclear export;5.29712357294107e-05!GO:0000786;nucleosome;5.54050038438648e-05!GO:0000082;G1/S transition of mitotic cell cycle;5.61438369295351e-05!GO:0043021;ribonucleoprotein binding;5.80295731379465e-05!GO:0051427;hormone receptor binding;5.96355835706828e-05!GO:0008094;DNA-dependent ATPase activity;6.03725748783605e-05!GO:0006401;RNA catabolic process;8.9139835619463e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;8.94472642548491e-05!GO:0043492;ATPase activity, coupled to movement of substances;9.50779547679294e-05!GO:0035257;nuclear hormone receptor binding;9.85063802054933e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000106898667953264!GO:0016853;isomerase activity;0.00010946415839932!GO:0005657;replication fork;0.000115892032301564!GO:0046914;transition metal ion binding;0.000116426664239556!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00011760346565472!GO:0007051;spindle organization and biogenesis;0.000125916568331218!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00012709222289306!GO:0016491;oxidoreductase activity;0.000129227432714925!GO:0003714;transcription corepressor activity;0.000142463838668396!GO:0019843;rRNA binding;0.000142463838668396!GO:0006302;double-strand break repair;0.000142463838668396!GO:0000151;ubiquitin ligase complex;0.000143081211610452!GO:0009165;nucleotide biosynthetic process;0.000147092975760899!GO:0005525;GTP binding;0.000161521304976942!GO:0045454;cell redox homeostasis;0.000181572032349703!GO:0019752;carboxylic acid metabolic process;0.000186295735883471!GO:0043623;cellular protein complex assembly;0.000187958264797083!GO:0005770;late endosome;0.000188299623864274!GO:0006612;protein targeting to membrane;0.000190398933510781!GO:0000776;kinetochore;0.000209953193068025!GO:0044452;nucleolar part;0.000212391748590514!GO:0006082;organic acid metabolic process;0.000215306218565722!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000248359815960005!GO:0042802;identical protein binding;0.000249660317296935!GO:0008186;RNA-dependent ATPase activity;0.000259267115451227!GO:0006352;transcription initiation;0.000291089728571029!GO:0030880;RNA polymerase complex;0.000292493546509435!GO:0005885;Arp2/3 protein complex;0.000293724287139206!GO:0003924;GTPase activity;0.000299646298347781!GO:0009892;negative regulation of metabolic process;0.000325142374108202!GO:0006402;mRNA catabolic process;0.000325481490302292!GO:0043681;protein import into mitochondrion;0.000355200619245019!GO:0005637;nuclear inner membrane;0.000414850076326759!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000436624031672908!GO:0006414;translational elongation;0.000437248572068837!GO:0008632;apoptotic program;0.000459930670902545!GO:0005788;endoplasmic reticulum lumen;0.000463747488454456!GO:0003682;chromatin binding;0.000466751847194447!GO:0007088;regulation of mitosis;0.000466751847194447!GO:0031982;vesicle;0.000474605319964995!GO:0007006;mitochondrial membrane organization and biogenesis;0.000499035210033253!GO:0031072;heat shock protein binding;0.000512581570518923!GO:0005762;mitochondrial large ribosomal subunit;0.000520596270684992!GO:0000315;organellar large ribosomal subunit;0.000520596270684992!GO:0006839;mitochondrial transport;0.000536500251832345!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000560747477387205!GO:0016741;transferase activity, transferring one-carbon groups;0.000561230665959074!GO:0006818;hydrogen transport;0.000574989752263401!GO:0005798;Golgi-associated vesicle;0.000579358312829219!GO:0031968;organelle outer membrane;0.00057992587894761!GO:0003684;damaged DNA binding;0.000593519153995843!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000600007164283933!GO:0008033;tRNA processing;0.000631389127658208!GO:0043065;positive regulation of apoptosis;0.000643487662595525!GO:0019867;outer membrane;0.000650256822547316!GO:0008654;phospholipid biosynthetic process;0.000654836312634108!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000657165164895019!GO:0000428;DNA-directed RNA polymerase complex;0.000657165164895019!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000659007287569618!GO:0046822;regulation of nucleocytoplasmic transport;0.000670184719819723!GO:0015992;proton transport;0.000670184719819723!GO:0003678;DNA helicase activity;0.000683717551737387!GO:0008168;methyltransferase activity;0.000692374810090217!GO:0016481;negative regulation of transcription;0.000692374810090217!GO:0043068;positive regulation of programmed cell death;0.000746428356465188!GO:0004004;ATP-dependent RNA helicase activity;0.000776202812705124!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000781726099685063!GO:0000049;tRNA binding;0.000862464903252136!GO:0016859;cis-trans isomerase activity;0.000901340678296834!GO:0016126;sterol biosynthetic process;0.0010098549403832!GO:0006383;transcription from RNA polymerase III promoter;0.00103597111998069!GO:0004674;protein serine/threonine kinase activity;0.00105826643210841!GO:0048522;positive regulation of cellular process;0.00106795056482615!GO:0044431;Golgi apparatus part;0.00107499757831838!GO:0051087;chaperone binding;0.00107775497687086!GO:0005741;mitochondrial outer membrane;0.00111207867726672!GO:0000059;protein import into nucleus, docking;0.00116237793092058!GO:0051252;regulation of RNA metabolic process;0.0011632268323379!GO:0007093;mitotic cell cycle checkpoint;0.0011632268323379!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00126360471429067!GO:0047485;protein N-terminus binding;0.00127384453694424!GO:0050790;regulation of catalytic activity;0.00128082611068117!GO:0031410;cytoplasmic vesicle;0.00132006694958193!GO:0032508;DNA duplex unwinding;0.00132894459560261!GO:0032392;DNA geometric change;0.00132894459560261!GO:0031988;membrane-bound vesicle;0.00134542228961991!GO:0051052;regulation of DNA metabolic process;0.00139219503907805!GO:0007050;cell cycle arrest;0.00145319149925154!GO:0006520;amino acid metabolic process;0.00145907111379443!GO:0006417;regulation of translation;0.00146157294720138!GO:0006091;generation of precursor metabolites and energy;0.0014649901849256!GO:0005773;vacuole;0.00146871020198333!GO:0051789;response to protein stimulus;0.00148405203916736!GO:0006986;response to unfolded protein;0.00148405203916736!GO:0051920;peroxiredoxin activity;0.00152003454683176!GO:0006917;induction of apoptosis;0.00163385240511796!GO:0032561;guanyl ribonucleotide binding;0.00171719007897136!GO:0019001;guanyl nucleotide binding;0.00171719007897136!GO:0000922;spindle pole;0.00189773340886423!GO:0006695;cholesterol biosynthetic process;0.0019771524441289!GO:0000323;lytic vacuole;0.00199564149380298!GO:0005764;lysosome;0.00199564149380298!GO:0030384;phosphoinositide metabolic process;0.0020055428021151!GO:0046983;protein dimerization activity;0.00200645640292019!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00208311716508077!GO:0000314;organellar small ribosomal subunit;0.00212317603175258!GO:0005763;mitochondrial small ribosomal subunit;0.00212317603175258!GO:0044440;endosomal part;0.00212858193988439!GO:0010008;endosome membrane;0.00212858193988439!GO:0005684;U2-dependent spliceosome;0.00215987065254295!GO:0012502;induction of programmed cell death;0.00219078652017752!GO:0043414;biopolymer methylation;0.00231151046280586!GO:0004527;exonuclease activity;0.00234254698644199!GO:0043488;regulation of mRNA stability;0.00243883034579939!GO:0043487;regulation of RNA stability;0.00243883034579939!GO:0051098;regulation of binding;0.00243883034579939!GO:0006268;DNA unwinding during replication;0.00258456433302432!GO:0006626;protein targeting to mitochondrion;0.00262205103870644!GO:0006405;RNA export from nucleus;0.00263085347686064!GO:0005048;signal sequence binding;0.00268017477264912!GO:0004518;nuclease activity;0.002717468142119!GO:0032259;methylation;0.0027445854724839!GO:0022890;inorganic cation transmembrane transporter activity;0.00283254271532281!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00290492246623767!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00290492246623767!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00290492246623767!GO:0007059;chromosome segregation;0.00291157006334783!GO:0048500;signal recognition particle;0.00297521731346315!GO:0032200;telomere organization and biogenesis;0.00308119797364981!GO:0000723;telomere maintenance;0.00308119797364981!GO:0000287;magnesium ion binding;0.00314845922724695!GO:0006607;NLS-bearing substrate import into nucleus;0.0031628407126231!GO:0015980;energy derivation by oxidation of organic compounds;0.0031844674089313!GO:0008610;lipid biosynthetic process;0.00327138227929586!GO:0042393;histone binding;0.00331237863850522!GO:0006338;chromatin remodeling;0.00337699643094138!GO:0030867;rough endoplasmic reticulum membrane;0.00357942714012839!GO:0016023;cytoplasmic membrane-bound vesicle;0.00364198126464609!GO:0006650;glycerophospholipid metabolic process;0.00383436540981512!GO:0007242;intracellular signaling cascade;0.00387661118481227!GO:0046483;heterocycle metabolic process;0.00411659773753087!GO:0016251;general RNA polymerase II transcription factor activity;0.00441239215530986!GO:0008139;nuclear localization sequence binding;0.00444091220791134!GO:0000096;sulfur amino acid metabolic process;0.00452440279242019!GO:0030663;COPI coated vesicle membrane;0.00465560687507934!GO:0030126;COPI vesicle coat;0.00465560687507934!GO:0030658;transport vesicle membrane;0.00468271599957128!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00472410406675073!GO:0007052;mitotic spindle organization and biogenesis;0.00472993619110567!GO:0009112;nucleobase metabolic process;0.00479478114894018!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00479478114894018!GO:0000118;histone deacetylase complex;0.00481133817472832!GO:0006284;base-excision repair;0.00484051915077514!GO:0051235;maintenance of localization;0.00491526515245433!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00550344173419547!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00550344173419547!GO:0006595;polyamine metabolic process;0.00555684591127808!GO:0008047;enzyme activator activity;0.00555684591127808!GO:0051223;regulation of protein transport;0.00560781905047085!GO:0005769;early endosome;0.00565855107676463!GO:0051287;NAD binding;0.00577136355987721!GO:0015036;disulfide oxidoreductase activity;0.00578809232788229!GO:0035258;steroid hormone receptor binding;0.00608020689231469!GO:0043284;biopolymer biosynthetic process;0.00613145304033094!GO:0008652;amino acid biosynthetic process;0.00620751634075312!GO:0045185;maintenance of protein localization;0.00631388240018089!GO:0031326;regulation of cellular biosynthetic process;0.00636509521491611!GO:0031252;leading edge;0.00657024302767639!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00663092296850538!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00700112185532573!GO:0045047;protein targeting to ER;0.00700112185532573!GO:0009967;positive regulation of signal transduction;0.00713040826835086!GO:0008312;7S RNA binding;0.00716661435492671!GO:0016197;endosome transport;0.00740598631262254!GO:0006891;intra-Golgi vesicle-mediated transport;0.00740598631262254!GO:0030134;ER to Golgi transport vesicle;0.00758209839295446!GO:0016584;nucleosome positioning;0.00759302881255228!GO:0000139;Golgi membrane;0.00759302881255228!GO:0040029;regulation of gene expression, epigenetic;0.0076215122083902!GO:0030127;COPII vesicle coat;0.00763783331972313!GO:0012507;ER to Golgi transport vesicle membrane;0.00763783331972313!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00772476126144987!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00772952438539931!GO:0050662;coenzyme binding;0.00789421664673891!GO:0031124;mRNA 3'-end processing;0.0080853773063151!GO:0015631;tubulin binding;0.00829504990210226!GO:0022415;viral reproductive process;0.00832142870741184!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00841645990096636!GO:0008276;protein methyltransferase activity;0.00850371514598139!GO:0007040;lysosome organization and biogenesis;0.00913076717493502!GO:0031625;ubiquitin protein ligase binding;0.0093411628551939!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00942137149041921!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00954278977038637!GO:0051101;regulation of DNA binding;0.00959146647738933!GO:0032507;maintenance of cellular protein localization;0.00982415075873285!GO:0003711;transcription elongation regulator activity;0.0098767132730482!GO:0006144;purine base metabolic process;0.0109176560337107!GO:0044262;cellular carbohydrate metabolic process;0.0109867444162934!GO:0030660;Golgi-associated vesicle membrane;0.0110545025299087!GO:0042770;DNA damage response, signal transduction;0.0113777085356968!GO:0007034;vacuolar transport;0.0115962476915964!GO:0003725;double-stranded RNA binding;0.0117836364690887!GO:0033157;regulation of intracellular protein transport;0.0124379010066062!GO:0042306;regulation of protein import into nucleus;0.0124379010066062!GO:0000339;RNA cap binding;0.0124645972133583!GO:0033673;negative regulation of kinase activity;0.0125599601928128!GO:0006469;negative regulation of protein kinase activity;0.0125599601928128!GO:0060090;molecular adaptor activity;0.0126766836905469!GO:0045045;secretory pathway;0.01271267263207!GO:0006270;DNA replication initiation;0.0127138669852938!GO:0006289;nucleotide-excision repair;0.0127653794825968!GO:0005832;chaperonin-containing T-complex;0.0128343326493731!GO:0051059;NF-kappaB binding;0.0129561411665071!GO:0008234;cysteine-type peptidase activity;0.0134421353456094!GO:0018193;peptidyl-amino acid modification;0.0134464102430999!GO:0043433;negative regulation of transcription factor activity;0.013997586543851!GO:0007021;tubulin folding;0.0146437446001628!GO:0048518;positive regulation of biological process;0.0147671068730269!GO:0044438;microbody part;0.0147671068730269!GO:0044439;peroxisomal part;0.0147671068730269!GO:0048471;perinuclear region of cytoplasm;0.0151452508637103!GO:0006378;mRNA polyadenylation;0.0153085668995216!GO:0030137;COPI-coated vesicle;0.0153227832174794!GO:0008629;induction of apoptosis by intracellular signals;0.0154816993021014!GO:0051348;negative regulation of transferase activity;0.0158169282028503!GO:0051338;regulation of transferase activity;0.0158169282028503!GO:0009303;rRNA transcription;0.0161096440850947!GO:0004576;oligosaccharyl transferase activity;0.0161843385955904!GO:0006376;mRNA splice site selection;0.0163719460639285!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0163719460639285!GO:0019210;kinase inhibitor activity;0.0167576267400139!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0170289024928683!GO:0008637;apoptotic mitochondrial changes;0.0170289024928683!GO:0000097;sulfur amino acid biosynthetic process;0.0170289024928683!GO:0007033;vacuole organization and biogenesis;0.0171395355999197!GO:0051539;4 iron, 4 sulfur cluster binding;0.0172598877424032!GO:0043549;regulation of kinase activity;0.0173733358073692!GO:0004860;protein kinase inhibitor activity;0.0175574493104489!GO:0006519;amino acid and derivative metabolic process;0.0176087157056644!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0178407855560389!GO:0009889;regulation of biosynthetic process;0.0178559601901834!GO:0051651;maintenance of cellular localization;0.0179718399723321!GO:0046489;phosphoinositide biosynthetic process;0.0181932408604284!GO:0032940;secretion by cell;0.0182891941121578!GO:0043022;ribosome binding;0.018938807361178!GO:0000781;chromosome, telomeric region;0.0190937865095403!GO:0000123;histone acetyltransferase complex;0.0191314802484748!GO:0031123;RNA 3'-end processing;0.0191486837046687!GO:0030041;actin filament polymerization;0.0191486837046687!GO:0046474;glycerophospholipid biosynthetic process;0.0191675185331205!GO:0006730;one-carbon compound metabolic process;0.0191770667647472!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0191770667647472!GO:0008097;5S rRNA binding;0.0196183653197228!GO:0046467;membrane lipid biosynthetic process;0.0196805438140297!GO:0005669;transcription factor TFIID complex;0.0201309611872864!GO:0030521;androgen receptor signaling pathway;0.0208739192149693!GO:0009266;response to temperature stimulus;0.0208739192149693!GO:0003702;RNA polymerase II transcription factor activity;0.0208739192149693!GO:0031903;microbody membrane;0.0209894170614028!GO:0005778;peroxisomal membrane;0.0209894170614028!GO:0006672;ceramide metabolic process;0.0211330636232957!GO:0004003;ATP-dependent DNA helicase activity;0.0212843151893148!GO:0006611;protein export from nucleus;0.0212919954493339!GO:0016272;prefoldin complex;0.0213053868488012!GO:0008250;oligosaccharyl transferase complex;0.0218870564911155!GO:0009615;response to virus;0.0219621791556835!GO:0009451;RNA modification;0.0220545938546418!GO:0006275;regulation of DNA replication;0.0221028722325697!GO:0004448;isocitrate dehydrogenase activity;0.0222412408897655!GO:0045859;regulation of protein kinase activity;0.0223789908677842!GO:0007004;telomere maintenance via telomerase;0.0226490235461924!GO:0005869;dynactin complex;0.0226496239356263!GO:0019318;hexose metabolic process;0.0228025421371266!GO:0016860;intramolecular oxidoreductase activity;0.0228445811404079!GO:0016279;protein-lysine N-methyltransferase activity;0.0246424091389096!GO:0018024;histone-lysine N-methyltransferase activity;0.0246424091389096!GO:0016278;lysine N-methyltransferase activity;0.0246424091389096!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0246850721289361!GO:0015002;heme-copper terminal oxidase activity;0.0246850721289361!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0246850721289361!GO:0004129;cytochrome-c oxidase activity;0.0246850721289361!GO:0005996;monosaccharide metabolic process;0.0248389404186115!GO:0019901;protein kinase binding;0.0257632526869561!GO:0000209;protein polyubiquitination;0.0257632526869561!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0259066135745368!GO:0006007;glucose catabolic process;0.0259605536310666!GO:0005096;GTPase activator activity;0.0260996256549437!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0266047398532492!GO:0005070;SH3/SH2 adaptor activity;0.0267395192956938!GO:0008017;microtubule binding;0.0268253998967125!GO:0031570;DNA integrity checkpoint;0.0269763474729876!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0271281629885786!GO:0005774;vacuolar membrane;0.0277705594382088!GO:0005758;mitochondrial intermembrane space;0.0279104302970961!GO:0046112;nucleobase biosynthetic process;0.0279104302970961!GO:0051090;regulation of transcription factor activity;0.0282317945850234!GO:0030518;steroid hormone receptor signaling pathway;0.0283329453532636!GO:0016301;kinase activity;0.0283329453532636!GO:0042990;regulation of transcription factor import into nucleus;0.0283963736620508!GO:0042991;transcription factor import into nucleus;0.0283963736620508!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.028443590056827!GO:0046966;thyroid hormone receptor binding;0.0286112823746924!GO:0007264;small GTPase mediated signal transduction;0.0288713490748214!GO:0051053;negative regulation of DNA metabolic process;0.0290051536758745!GO:0032984;macromolecular complex disassembly;0.0291791359196397!GO:0009081;branched chain family amino acid metabolic process;0.0292425826215566!GO:0005652;nuclear lamina;0.0292425826215566!GO:0051881;regulation of mitochondrial membrane potential;0.0294474436616822!GO:0031902;late endosome membrane;0.0296366851276176!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0296366851276176!GO:0000726;non-recombinational repair;0.029835442395375!GO:0035267;NuA4 histone acetyltransferase complex;0.0299207009085932!GO:0000178;exosome (RNase complex);0.0300877377141504!GO:0006367;transcription initiation from RNA polymerase II promoter;0.030278727772969!GO:0035035;histone acetyltransferase binding;0.0308509417099224!GO:0003756;protein disulfide isomerase activity;0.0311317898283921!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0311317898283921!GO:0043189;H4/H2A histone acetyltransferase complex;0.0319298723569549!GO:0005784;translocon complex;0.0321337749832782!GO:0003746;translation elongation factor activity;0.0327591927163619!GO:0045815;positive regulation of gene expression, epigenetic;0.032759450078522!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0335800660507477!GO:0051452;cellular pH reduction;0.0342516175370641!GO:0051453;regulation of cellular pH;0.0342516175370641!GO:0045851;pH reduction;0.0342516175370641!GO:0018196;peptidyl-asparagine modification;0.0342516175370641!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0342516175370641!GO:0000792;heterochromatin;0.0343434790868644!GO:0009067;aspartate family amino acid biosynthetic process;0.0349398527661336!GO:0046365;monosaccharide catabolic process;0.0349644351503628!GO:0004659;prenyltransferase activity;0.0349958188872776!GO:0048487;beta-tubulin binding;0.0351388007796629!GO:0000725;recombinational repair;0.0351515477152721!GO:0000724;double-strand break repair via homologous recombination;0.0351515477152721!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0352418439787026!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0352418439787026!GO:0009126;purine nucleoside monophosphate metabolic process;0.0352418439787026!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0352418439787026!GO:0022411;cellular component disassembly;0.0352793212788316!GO:0048468;cell development;0.0356823618470209!GO:0046128;purine ribonucleoside metabolic process;0.0359654141567204!GO:0042278;purine nucleoside metabolic process;0.0359654141567204!GO:0005876;spindle microtubule;0.0363267879934662!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0363621435094799!GO:0006516;glycoprotein catabolic process;0.0365311949165931!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0367866626846575!GO:0051540;metal cluster binding;0.0368962864169663!GO:0051536;iron-sulfur cluster binding;0.0368962864169663!GO:0016569;covalent chromatin modification;0.0369120096555017!GO:0032386;regulation of intracellular transport;0.0371795179562541!GO:0030695;GTPase regulator activity;0.0376801089918967!GO:0030118;clathrin coat;0.0376968704512223!GO:0016407;acetyltransferase activity;0.0387098547726737!GO:0030508;thiol-disulfide exchange intermediate activity;0.0387098547726737!GO:0030027;lamellipodium;0.0387187880229713!GO:0006564;L-serine biosynthetic process;0.0388637279333432!GO:0045892;negative regulation of transcription, DNA-dependent;0.0389770627163789!GO:0005092;GDP-dissociation inhibitor activity;0.0392974652389893!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0395254683138998!GO:0006643;membrane lipid metabolic process;0.0395254683138998!GO:0008408;3'-5' exonuclease activity;0.0403602962681583!GO:0046426;negative regulation of JAK-STAT cascade;0.0404454127056155!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0413553431735749!GO:0006740;NADPH regeneration;0.0415059517300972!GO:0006098;pentose-phosphate shunt;0.0415059517300972!GO:0006406;mRNA export from nucleus;0.0417851065493356!GO:0031647;regulation of protein stability;0.0432442369427594!GO:0008180;signalosome;0.0433439245784187!GO:0008299;isoprenoid biosynthetic process;0.0433519514967161!GO:0032039;integrator complex;0.0439915270236241!GO:0044450;microtubule organizing center part;0.0440100342777497!GO:0042054;histone methyltransferase activity;0.0440832874874075!GO:0006278;RNA-dependent DNA replication;0.0440976253663113!GO:0019900;kinase binding;0.0443506992599344!GO:0008022;protein C-terminus binding;0.0453550631045074!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0455173210646231!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0455173210646231!GO:0004177;aminopeptidase activity;0.0462136181936715!GO:0033116;ER-Golgi intermediate compartment membrane;0.0462224566743762!GO:0050681;androgen receptor binding;0.0462224566743762!GO:0051220;cytoplasmic sequestering of protein;0.0462831065949831!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0467529774295918!GO:0001836;release of cytochrome c from mitochondria;0.0469706518514437!GO:0001726;ruffle;0.0471077121763941!GO:0016605;PML body;0.0474345521651095!GO:0006892;post-Golgi vesicle-mediated transport;0.0477947761279902!GO:0004722;protein serine/threonine phosphatase activity;0.0483465271656885!GO:0044437;vacuolar part;0.0484221420766824!GO:0000080;G1 phase of mitotic cell cycle;0.0484423789546383!GO:0043241;protein complex disassembly;0.0486993133257757!GO:0009396;folic acid and derivative biosynthetic process;0.0490921018756917!GO:0030433;ER-associated protein catabolic process;0.0495572399085406!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0495572399085406
|sample_id=10828
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=TOPORS:1.70207575047;MYB:1.56415497553;ELF1,2,4:1.52475359131;POU3F1..4:1.45147273983;FOXP1:1.37449622822;PITX1..3:1.23642195968;GATA6:1.21396394244;SPI1:1.19394278926;SPIB:1.12727590068;RUNX1..3:1.12157839999;E2F1..5:1.07319909148;HOXA9_MEIS1:1.05646555838;PAX4:1.02377827831;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.0108556332;FOXQ1:1.00580753237;YY1:0.999839417369;ALX1:0.943082028457;DMAP1_NCOR{1,2}_SMARC:0.909755219189;NANOG{mouse}:0.90078010295;POU2F1..3:0.869680010444;TEF:0.865452208616;ETS1,2:0.839643599913;NFY{A,B,C}:0.835800887912;bHLH_family:0.78455784138;HES1:0.758805647424;ONECUT1,2:0.746413285598;TLX2:0.746013257072;PAX8:0.694336711216;NRF1:0.686990235094;ZBTB16:0.672961092853;POU5F1:0.668539579625;HBP1_HMGB_SSRP1_UBTF:0.656575711111;STAT1,3:0.654725142347;FOXD3:0.62996633277;HAND1,2:0.625276524111;IKZF2:0.620638667437;VSX1,2:0.595025987994;HOX{A4,D4}:0.540262463098;ZNF143:0.503099367317;AIRE:0.476698821656;NKX6-1,2:0.469041284385;FOXP3:0.467063101256;DBP:0.446888799193;RREB1:0.424753909726;GCM1,2:0.366570600362;HIF1A:0.359297327414;CUX2:0.355574642286;RFX2..5_RFXANK_RFXAP:0.346875946074;POU1F1:0.342495900004;GZF1:0.321037848267;ARID5B:0.296791223106;TFAP4:0.287900046867;NR5A1,2:0.265807880825;CDX1,2,4:0.254215688332;PAX2:0.240264627372;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.235273726896;SOX{8,9,10}:0.215917196787;PBX1:0.195740951387;FOX{I1,J2}:0.171957890497;FOXN1:0.15762819391;TGIF1:0.14844106984;IRF1,2:0.127853047129;ELK1,4_GABP{A,B1}:0.115445030805;CEBPA,B_DDIT3:0.112009714168;ATF5_CREB3:0.103414096777;AR:0.100810675708;MYOD1:0.0759039325577;RBPJ:0.0742604565098;SOX17:0.0681634099537;MYBL2:0.0554992641416;PAX3,7:0.0380102816402;TFDP1:0.0112230988132;OCT4_SOX2{dimer}:0.00461708410236;SREBF1,2:-0.00983017900034;PDX1:-0.0114359199248;SMAD1..7,9:-0.0402893549634;BREu{core}:-0.0457221222142;ZNF148:-0.0480040224298;FOXA2:-0.0564027370407;PPARG:-0.0586139132319;NFKB1_REL_RELA:-0.0992231006536;FOSL2:-0.117262840299;PAX6:-0.131046660046;HOX{A6,A7,B6,B7}:-0.132638255049;GATA4:-0.134922499672;NR6A1:-0.137825804961;RXR{A,B,G}:-0.146563875254;ZNF423:-0.154052732911;PRRX1,2:-0.167704749309;GFI1:-0.183984252024;SOX5:-0.195474857939;AHR_ARNT_ARNT2:-0.224141959496;ZEB1:-0.226720353625;SNAI1..3:-0.229106557596;HNF4A_NR2F1,2:-0.244385606734;STAT5{A,B}:-0.258897674714;ESR1:-0.266699747611;SPZ1:-0.274599052602;MYFfamily:-0.329465944176;RXRA_VDR{dimer}:-0.330403651062;XBP1:-0.344204668451;NFE2:-0.346336527937;HNF1A:-0.353748017893;ATF4:-0.362054550953;NKX2-3_NKX2-5:-0.374793469173;POU6F1:-0.378656571397;ZNF384:-0.397454719358;TFAP2{A,C}:-0.421674374004;FOS_FOS{B,L1}_JUN{B,D}:-0.433261680869;UFEwm:-0.440054314625;FOXM1:-0.440913956049;BPTF:-0.441095171965;ZNF238:-0.447206471321;SRF:-0.4523229103;HMX1:-0.46063281343;PRDM1:-0.46347690453;SOX2:-0.465077363047;RORA:-0.472113915459;ZBTB6:-0.499339691976;MEF2{A,B,C,D}:-0.513626377323;CRX:-0.541814733029;NKX2-1,4:-0.548609574086;BACH2:-0.550261074987;CDC5L:-0.552368188434;KLF4:-0.560682936391;NFE2L2:-0.56849344497;NKX2-2,8:-0.58486716545;NFATC1..3:-0.58657219951;REST:-0.588385978498;EVI1:-0.606604059346;LMO2:-0.614128848787;MZF1:-0.6187976309;EP300:-0.622178725333;ESRRA:-0.648954159579;GTF2I:-0.663235133327;NKX3-1:-0.68954148161;NFE2L1:-0.690964204098;NKX3-2:-0.729074827411;IRF7:-0.730699169009;HLF:-0.767923383282;PATZ1:-0.77853781471;NHLH1,2:-0.783047158253;HSF1,2:-0.789901434427;NFIL3:-0.791109675655;ZFP161:-0.795029119212;EN1,2:-0.814811437071;LHX3,4:-0.82832524606;FOX{F1,F2,J1}:-0.853432055463;STAT2,4,6:-0.871725742448;HMGA1,2:-0.880684378317;PAX5:-0.882317034722;TFAP2B:-0.92563435084;ATF2:-0.936510915099;ATF6:-0.94019574412;FOX{D1,D2}:-0.96307887133;TEAD1:-0.978564351625;CREB1:-0.980139355594;TBX4,5:-0.995262080856;ZIC1..3:-1.01081099243;PAX1,9:-1.03594371796;NFIX:-1.05701188348;TLX1..3_NFIC{dimer}:-1.05949770783;EBF1:-1.06633982504;MAZ:-1.08059239124;GTF2A1,2:-1.08176042356;SP1:-1.08198064435;LEF1_TCF7_TCF7L1,2:-1.08296400817;MTE{core}:-1.08391173492;MED-1{core}:-1.0912546735;HIC1:-1.11169423528;XCPE1{core}:-1.1248742548;RFX1:-1.13582743113;TBP:-1.13822345069;FOXO1,3,4:-1.14559928705;NANOG:-1.14560517601;TFCP2:-1.25506250402;MTF1:-1.28514558993;MAFB:-1.30628832758;ALX4:-1.3121088723;FOXL1:-1.32639419113;HOX{A5,B5}:-1.33616086242;TP53:-1.41231203864;GFI1B:-1.42546915131;IKZF1:-1.43855965565;EGR1..3:-1.43880124016;NR1H4:-1.45218241929;TAL1_TCF{3,4,12}:-1.45558946129;GLI1..3:-1.66441199835;NR3C1:-1.6801121896;ADNP_IRX_SIX_ZHX:-1.83534929309;JUN:-1.96070076811;T:-2.08160488815
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10828-111C9;search_select_hide=table117:FF:10828-111C9
}}
}}

Latest revision as of 15:07, 3 June 2020

Name:acute myeloid leukemia (FAB M1) cell line:HYT-1
Species:Human (Homo sapiens)
Library ID:CNhs13054
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age62
cell typemyeloid progenitor cell
cell lineHYT-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005964
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13054 CAGE DRX007802 DRR008674
Accession ID Hg19

Library idBAMCTSS
CNhs13054 DRZ000099 DRZ001484
Accession ID Hg38

Library idBAMCTSS
CNhs13054 DRZ011449 DRZ012834
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.248
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.419
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0834
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0834
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.042
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.108
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.379
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0834
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.108
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic1.102
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.128
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.153
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0.19
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.451
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.408
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0834
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.321
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.0834
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0984
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.369
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13054

Jaspar motifP-value
MA0002.20.00631
MA0003.10.352
MA0004.10.00793
MA0006.10.203
MA0007.10.953
MA0009.10.151
MA0014.10.744
MA0017.10.284
MA0018.23.5987e-4
MA0019.10.0508
MA0024.10.00104
MA0025.10.305
MA0027.10.252
MA0028.10.00108
MA0029.10.75
MA0030.10.0423
MA0031.10.279
MA0035.20.00957
MA0038.10.0362
MA0039.20.735
MA0040.10.589
MA0041.10.244
MA0042.10.362
MA0043.10.0609
MA0046.10.0675
MA0047.20.84
MA0048.10.336
MA0050.10.202
MA0051.10.274
MA0052.10.202
MA0055.10.197
MA0057.10.769
MA0058.10.00472
MA0059.10.00313
MA0060.14.97754e-4
MA0061.10.195
MA0062.21.65337e-8
MA0065.20.0266
MA0066.10.618
MA0067.10.763
MA0068.10.275
MA0069.10.296
MA0070.10.758
MA0071.10.17
MA0072.10.966
MA0073.10.63
MA0074.10.443
MA0076.15.39346e-4
MA0077.10.642
MA0078.10.68
MA0079.20.476
MA0080.21.19108e-14
MA0081.10.00165
MA0083.10.021
MA0084.10.462
MA0087.10.321
MA0088.10.039
MA0090.11.248e-4
MA0091.10.754
MA0092.10.169
MA0093.10.00674
MA0099.20.00857
MA0100.10.0567
MA0101.10.79
MA0102.20.386
MA0103.10.295
MA0104.27.99816e-4
MA0105.15.24086e-4
MA0106.10.986
MA0107.10.103
MA0108.23.96895e-9
MA0111.10.206
MA0112.20.13
MA0113.10.565
MA0114.10.396
MA0115.10.187
MA0116.16.79367e-5
MA0117.10.722
MA0119.10.336
MA0122.10.497
MA0124.10.726
MA0125.10.594
MA0131.10.136
MA0135.10.0224
MA0136.13.70528e-16
MA0137.20.0949
MA0138.20.804
MA0139.10.0786
MA0140.10.0139
MA0141.10.766
MA0142.10.576
MA0143.10.647
MA0144.10.589
MA0145.10.369
MA0146.10.00775
MA0147.12.60369e-4
MA0148.10.991
MA0149.10.456
MA0150.10.864
MA0152.10.0039
MA0153.10.005
MA0154.10.0267
MA0155.10.853
MA0156.12.50701e-11
MA0157.10.332
MA0159.10.552
MA0160.10.106
MA0162.10.495
MA0163.11.04112e-15
MA0164.10.742
MA0258.10.0749
MA0259.10.011



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13054

Novel motifP-value
10.11
100.0252
1000.554
1010.193
1020.433
1030.347
1040.93
1050.854
1060.825
1070.159
1080.856
1090.0889
110.171
1100.26
1110.243
1120.827
1130.997
1140.137
1150.907
1160.119
1170.0144
1180.0486
1190.673
120.633
1200.12
1210.862
1220.52
1232.08652e-5
1240.132
1250.211
1260.271
1270.684
1280.748
1290.933
130.0116
1300.755
1310.762
1320.765
1330.906
1340.623
1350.628
1360.237
1370.329
1380.963
1390.307
140.751
1400.538
1410.294
1420.208
1430.743
1440.321
1450.896
1460.549
1470.106
1480.482
1490.452
150.567
1500.954
1510.646
1520.623
1530.597
1540.496
1550.0442
1560.755
1570.139
1580.0543
1590.107
160.823
1600.214
1610.0687
1620.994
1630.499
1640.229
1650.643
1660.556
1670.145
1680.216
1690.0935
170.744
180.604
190.986
20.843
200.704
210.196
220.602
230.151
240.255
250.134
260.214
270.547
280.675
290.0375
30.125
300.0808
310.277
320.0583
330.473
340.962
350.15
360.105
370.123
380.619
390.317
40.226
400.162
410.554
420.403
430.481
440.721
450.778
460.18
470.0676
480.0434
490.214
50.721
500.768
510.588
520.358
530.037
540.848
550.256
560.753
570.144
580.0487
590.525
60.97
600.935
610.0423
620.0544
630.296
640.265
650.83
660.0348
670.849
680.722
690.617
70.04
700.604
710.0234
720.446
730.277
740.346
750.0182
760.617
770.282
780.0208
790.147
80.66
800.155
810.889
820.924
830.214
840.136
850.613
860.461
870.887
880.178
890.52
90.671
900.139
910.325
920.413
930.871
940.763
950.0467
960.526
970.457
980.124
990.466



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13054


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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