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{{f5samples
{{f5samples
|id=FF:11887-125D6
|DRA_sample_Accession=CAGE@SAMD00005991
|name=CD14+ monocytes - treated with Cryptococcus, donor3
|accession_numbers=CAGE;DRX008146;DRR009018;DRZ000443;DRZ001828;DRZ011793;DRZ013178
|sample_id=11887
|ancestors_in_anatomy_facet=
|rna_tube_id=125D6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
|rna_box=125
|rna_position=D6
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=D5-8
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=
|sample_donor(cell lot)=donor3
|sample_sex=female
|sample_age=21
|sample_ethnicity=
|rna_rin=9.4
|rna_od260/230=0.89
|rna_od260/280=2
|sample_cell_type=monocyte
|sample_cell_line=
|sample_collaboration=Christine Wells (University of Queensland)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=1.607445
|rna_concentration=0.35721
|sample_note=
|profile_hcage=CNhs13546,LSID1029,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000634,FF:0011105
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.09!1215.98!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.71!515.29!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.65!447.20!TFEC;;chr10:64576105..64576133,-!p1@EGR2!2.29!384.95!EGR2;;chr12:54778471..54778528,-!p1@ZNF385A!2.16!144.05!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.11!128.32!IRF8;;chr6:106534192..106534224,+!p1@PRDM1!1.98!253.26!PRDM1;;chr10:35484053..35484076,+!p1@CREM!1.98!229.44!CREM;;chr21:34442439..34442455,+!p1@OLIG1!1.98!93.48!OLIG1;;chr11:47400062..47400077,-!p2@SPI1!1.91!80.45!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.88!75.73!SPI1;;chr2:70142232..70142251,+!p1@MXD1!1.87!386.52!MXD1;;chr10:31288398..31288455,-!p2@ZNF438!1.83!77.98!ZNF438;;chr20:39317868..39317884,-!p1@MAFB!1.81!709.68!MAFB;;chr19:45971246..45971265,+!p1@FOSB!1.76!995.30!FOSB;;chr2:145277640..145277771,-!p1@ZEB2!1.71!635.29!ZEB2;;chr3:12330560..12330579,+!p1@PPARG!1.71!57.98!PPARG;;chr1:25256756..25256774,-!p1@RUNX3!1.70!90.79!RUNX3;;chr21:34398234..34398250,+!p1@OLIG2!1.70!48.76!OLIG2;;chr6:106534230..106534254,+!p2@PRDM1!1.68!114.83!PRDM1;;chr10:31288370..31288393,-!p3@ZNF438!1.68!47.42!ZNF438;;chr10:51572408..51572454,+!p3@NCOA4!1.66!251.47!NCOA4;;chr16:31885093..31885165,+!p1@ZNF267!1.63!602.48!ZNF267;;chr14:35872453..35872485,-!p2@NFKBIA!1.61!95.28!NFKBIA;;chr11:47400032..47400043,-!p5@SPI1!1.60!38.65!SPI1;;chr21:30671690..30671762,+!p2@BACH1!1.59!125.62!BACH1;;chr2:157189180..157189290,-!p1@NR4A2!1.58!185.17!NR4A2;;chr10:51572339..51572376,+!p4@NCOA4!1.58!82.02!NCOA4;;chr10:104155659..104155676,+!p4@NFKB2!1.58!45.39!NFKB2;;chr11:47399996..47400014,-!p4@SPI1!1.57!36.18!SPI1;;chr12:52445218..52445237,+!p1@NR4A1!1.54!408.32!NR4A1;;chr19:50432132..50432217,+!p2@ATF5!1.54!39.55!ATF5;;chr1:212782094..212782109,+!p1@ATF3!1.53!843.84!ATF3;;chr2:68592394..68592405,+!p2@PLEK!1.53!33.03!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!1.51!31.01!IKZF1;;chr12:72056800..72056834,+!p1@THAP2!1.49!39.78!THAP2;;chr13:41593425..41593480,-!p1@ELF1!1.47!175.96!ELF1;;chr10:64018918..64018936,+!p2@ZNF365!1.47!28.76!ZNF365;;chr6:44233252..44233296,-!p1@NFKBIE!1.44!251.02!NFKBIE;;chr2:145275162..145275202,-!p2@ZEB2!1.44!150.12!ZEB2;;chr8:22550982..22550999,-!p1@EGR3!1.43!71.91!EGR3;;chr20:48599506..48599526,+!p1@SNAI1!1.42!156.18!SNAI1;;chr10:35484090..35484104,+!p6@CREM!1.42!25.17!CREM;;chr14:35873947..35873965,-!p1@NFKBIA!1.40!1471.71!NFKBIA;;chr4:106068026..106068084,+!p1@TET2!1.39!204.27!TET2;;chr2:61108695..61108753,+!p1@REL!1.38!154.16!REL;;chr12:54778351..54778378,-!p6@ZNF385A!1.38!23.15!ZNF385A;;chr21:30671235..30671253,+!p1@BACH1!1.36!272.14!BACH1;;chr9:102584159..102584174,+!p2@NR4A3!1.36!39.10!NR4A3;;chr21:36260295..36260310,-!p3@RUNX1!1.36!35.06!RUNX1;;chr11:47400045..47400060,-!p6@SPI1!1.36!22.02!SPI1;;chr6:15246200..15246214,+!p2@JARID2!1.33!54.83!JARID2;;chr3:12329397..12329433,+!p2@PPARG!1.33!45.62!PPARG;;chr9:102584262..102584276,+!p1@NR4A3!1.33!45.17!NR4A3;;chr10:31288329..31288353,-!p7@ZNF438!1.33!20.45!ZNF438;;chr10:104154246..104154347,+!p3@NFKB2!1.32!119.55!NFKB2;;chr14:35872962..35873025,-!p3@NFKBIA!1.31!48.76!NFKBIA;;chr19:36391434..36391450,-!p1@NFKBID!1.31!37.98!NFKBID;;chrX:153305787..153305807,-!p3@MECP2!1.30!18.88!MECP2;;chr18:3449720..3449749,+!p2@TGIF1!1.29!38.88!TGIF1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.29!25.62!NFKBIZ;;chr6:144385698..144385742,-!p2@PLAGL1!1.29!22.25!PLAGL1;;chr8:53373491..53373506,-!p4@ST18!1.29!18.43!ST18;;chr21:30672433..30672464,+!p6@BACH1!1.29!18.43!BACH1;;chr4:103422499..103422632,+!p1@NFKB1!1.28!364.73!NFKB1;;chr2:145277882..145277967,-!p3@ZEB2!1.28!30.79!ZEB2;;chr12:48298765..48298783,-!p2@VDR!1.27!36.18!VDR;;chr20:48807351..48807384,+!p1@CEBPB!1.26!1723.63!CEBPB;;chr7:115670792..115670797,-!p2@TFEC!1.26!17.08!TFEC;;chr10:104155480..104155534,+!p2@NFKB2!1.25!106.97!NFKB2;;chr8:80679993..80680011,-!p1@HEY1!1.25!24.27!HEY1;;chr12:72056773..72056796,+!p3@THAP2!1.25!22.02!THAP2;;chr19:45251395..45251432,+!p8@BCL3!1.25!16.85!BCL3;;chr22:38597987..38598021,+!p2@MAFF!1.24!97.75!MAFF;;chr2:70314240..70314256,+!p4@PCBP1!1.24!33.93!PCBP1;;chr2:61108808..61108821,+!p3@REL!1.24!20.45!REL;;chr12:72056749..72056767,+!p6@THAP2!1.24!18.20!THAP2;;chr11:47399920..47399931,-!p7@SPI1!1.23!15.96!SPI1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.23!15.96!ZBED1;;chr19:54041669..54041697,+!p2@ZNF331!1.21!15.06!ZNF331;;chr1:37940170..37940190,+!p1@ZC3H12A!1.20!178.88!ZC3H12A;;chr12:96588219..96588263,+!p2@ELK3!1.19!103.37!ELK3;;chr10:35484804..35484902,+!p2@CREM!1.19!54.83!CREM;;chr3:170075436..170075520,+!p1@SKIL!1.18!301.80!SKIL;;chr9:102584128..102584144,+!p3@NR4A3!1.18!26.74!NR4A3;;chr12:11802753..11802834,+!p2@ETV6!1.17!67.19!ETV6;;chr19:54058073..54058088,+!p1@ZNF331!1.17!13.93!ZNF331;;chr1:157108130..157108173,-!p1@ETV3!1.16!95.96!ETV3;;chr21:36421535..36421610,-!p2@RUNX1!1.16!47.42!RUNX1;;chr2:97202480..97202499,+!p1@ARID5A!1.15!133.26!ARID5A;;chr19:13213662..13213686,-!p1@LYL1!1.15!19.55!LYL1;;chr1:38325227..38325246,-!p2@MTF1!1.15!17.75!MTF1;;chr14:35872494..35872511,-!p5@NFKBIA!1.15!17.53!NFKBIA;;chr9:129567282..129567353,+!p1@ZBTB43!1.14!164.95!ZBTB43;;chrX:129244454..129244488,-!p1@ELF4!1.14!91.24!ELF4;;chr4:103423079..103423112,+!p4@NFKB1!1.14!12.81!NFKB1;;chr18:3449618..3449634,+!p13@TGIF1!1.12!15.06!TGIF1;;chr6:106535598..106535637,+!p7@PRDM1!1.12!12.14!PRDM1;;chr19:45252008..45252024,+!p2@BCL3!1.11!38.88!BCL3;;chr17:38497662..38497713,+!p4@RARA!1.11!13.71!RARA;;chr5:88178983..88179012,-!p1@MEF2C!1.10!88.77!MEF2C;;chr12:96588279..96588299,+!p4@ELK3!1.10!55.51!ELK3;;chr21:34442540..34442560,+!p2@OLIG1!1.10!11.69!OLIG1;;chr2:231090471..231090504,+!p2@SP140!1.10!11.69!SP140;;chr2:238600998..238601013,+!p5@LRRFIP1!1.10!11.46!LRRFIP1;;chr7:17338266..17338282,+!p1@AHR!1.09!122.25!AHR;;chr2:238600933..238600985,+!p3@LRRFIP1!1.09!62.25!LRRFIP1;;chr6:12012249..12012266,+!p5@HIVEP1!1.09!19.78!HIVEP1;;chr12:48298785..48298828,-!p1@VDR!1.08!58.20!VDR;;chr6:12012170..12012245,+!p1@HIVEP1!1.07!54.16!HIVEP1;;chr19:45250948..45250998,+!p3@BCL3!1.06!26.52!BCL3;;chr2:231280954..231280965,+!p2@SP100!1.06!19.33!SP100;;chr18:3449586..3449617,+!p8@TGIF1!1.06!17.08!TGIF1;;chr2:61108771..61108789,+!p4@REL!1.06!16.18!REL;;chr7:106809470..106809481,+!p2@HBP1!1.06!14.83!HBP1;;chr19:33793430..33793447,-!p1@CEBPA!1.05!44.05!CEBPA;;chr10:35416142..35416169,+!p3@CREM!1.05!27.64!CREM;;chr8:72756063..72756125,-!p1@MSC!1.05!20.90!MSC;;chr20:48807615..48807644,+!p6@CEBPB!1.05!17.30!CEBPB;;chr14:64971014..64971044,+!p4@ZBTB1!1.05!17.08!ZBTB1;;chr18:3449695..3449712,+!p9@TGIF1!1.05!15.96!TGIF1;;chr9:110252035..110252057,-!p1@KLF4!1.04!160.23!KLF4;;chr2:192015701..192015743,-!p1@STAT4!1.04!13.93!STAT4;;chr2:145275228..145275241,-!p11@ZEB2!1.04!12.14!ZEB2;;chr13:41635029..41635044,-!p4@ELF1!1.03!20.90!ELF1;;chr19:19496539..19496576,+!p8@GATAD2A!1.03!17.30!GATAD2A;;chr2:28618532..28618610,+!p4@FOSL2!1.03!16.63!FOSL2;;chr2:28615716..28615733,+!p1@FOSL2!1.02!460.01!FOSL2;;chr2:208394817..208394834,+!p3@CREB1!1.02!39.10!CREB1;;chr20:48807648..48807671,+!p9@CEBPB!1.02!13.93!CEBPB;;chr12:96588368..96588394,+!p3@ELK3!1.01!25.39!ELK3;;chr6:391743..391759,+!p1@IRF4!1.01!9.21!IRF4;;chr11:65430554..65430579,-!p3@RELA!1.00!23.15!RELA;;chr7:128577972..128578047,+!p1@IRF5!1.00!14.38!IRF5;;chr10:104155680..104155687,+!p6@NFKB2!0.99!8.76!NFKB2;;chr19:12902289..12902307,+!p1@JUNB!0.98!1984.98!JUNB;;chr20:48807456..48807475,+!p3@CEBPB!0.98!16.85!CEBPB;;chr2:70167296..70167306,+!p3@MXD1!0.98!13.26!MXD1;;chr14:75745523..75745537,+!p1@FOS!0.97!1020.02!FOS;;chr1:212738742..212738755,+!p2@ATF3!0.97!8.31!ATF3;;chr2:70142189..70142223,+!p2@MXD1!0.96!60.00!MXD1;;chr7:17338324..17338341,+!p3@AHR!0.96!28.09!AHR;;chr5:142782823..142782854,-!p3@NR3C1!0.96!11.91!NR3C1;;chr7:111846777..111846804,+!p2@ZNF277!0.96!9.66!ZNF277;;chr12:57914286..57914304,-!p1@DDIT3!0.95!295.29!DDIT3;;chr11:615942..615957,-!p1@IRF7!0.95!76.63!IRF7;;chr3:39195037..39195069,-!p2@CSRNP1!0.95!50.34!CSRNP1;;chrX:129244430..129244442,-!p5@ELF4!0.95!7.87!ELF4;;chr1:156470515..156470542,-!p2@MEF2D!0.94!41.57!MEF2D;;chr1:161736038..161736056,+!p4@ATF6!0.93!17.98!ATF6;;chr7:99156393..99156433,+!p6@ZNF655!0.93!17.30!ZNF655;;chr18:3448455..3448480,+!p5@TGIF1!0.93!14.16!TGIF1;;chr4:83822199..83822239,+!p2@THAP9!0.93!8.99!THAP9;;chr21:30673091..30673135,+!p7@BACH1!0.93!7.42!BACH1;;chr3:101568349..101568365,+!p1@NFKBIZ!0.92!396.19!NFKBIZ;;chr9:88969303..88969335,-!p1@ZCCHC6!0.92!71.46!ZCCHC6;;chr2:185463247..185463263,+!p1@ZNF804A!0.91!12.81!ZNF804A;;chr3:126191157..126191171,-!p4@ZXDC!0.91!7.19!ZXDC;;chr10:104155455..104155479,+!p1@NFKB2!0.90!106.07!NFKB2;;chr6:12011943..12012015,+!p2@HIVEP1!0.90!23.37!HIVEP1;;chr8:116681123..116681143,-!p4@TRPS1!0.90!13.71!TRPS1;;chr14:35872926..35872951,-!p4@NFKBIA!0.90!9.89!NFKBIA;;chr13:41593392..41593403,-!p7@ELF1!0.90!6.97!ELF1;;chr6:15246261..15246312,+!p1@JARID2!0.89!173.94!JARID2;;chr9:102584241..102584261,+!p4@NR4A3!0.89!10.79!NR4A3;;chr8:81397846..81397860,+!p3@ZBTB10!0.89!8.54!ZBTB10;;chr9:102584278..102584285,+!p5@NR4A3!0.89!6.74!NR4A3;;chr2:70167033..70167069,+!p11@MXD1!0.89!6.74!MXD1;;chr4:103446567..103446592,+!p15@NFKB1!0.89!6.74!NFKB1;;chr6:20403916..20403965,+!p3@E2F3!0.88!31.46!E2F3;;chr4:185395633..185395651,-!p2@IRF2!0.88!10.79!IRF2;;chr2:145277589..145277612,-!p12@ZEB2!0.88!6.52!ZEB2;;chr19:50432104..50432126,+!p6@ATF5!0.88!6.52!ATF5;;chr1:25256439..25256476,-!p3@RUNX3!0.88!6.52!RUNX3;;chr9:88969339..88969422,-!p2@ZCCHC6!0.87!52.59!ZCCHC6;;chr17:38498594..38498661,+!p2@RARA!0.87!22.70!RARA;;chr18:3449527..3449582,+!p6@TGIF1!0.87!12.58!TGIF1;;chr19:45254529..45254561,+!p10@BCL3!0.87!8.76!BCL3;;chr4:87857474..87857489,+!p7@AFF1!0.86!11.24!AFF1;;chr2:145275211..145275220,-!p14@ZEB2!0.86!7.64!ZEB2;;chr14:35872414..35872425,-!p7@NFKBIA!0.86!6.97!NFKBIA;;chr10:104154415..104154434,+!p5@NFKB2!0.86!6.29!NFKB2;;chr2:231090433..231090469,+!p1@SP140!0.86!6.29!SP140;;chr4:26322616..26322652,+!p1@RBPJ!0.85!140.00!RBPJ;;chr8:72756267..72756296,-!p4@MSC!0.85!9.21!MSC;;chr1:25291620..25291635,-!p4@RUN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AT5;;chr1:249132512..249132547,+!p2@ZNF672!0.45!14.83!ZNF672;;chr19:58361185..58361235,+!p2@ZNF587!0.45!13.26!ZNF587;;chr7:26191809..26191890,+!p1@NFE2L3!0.45!12.14!NFE2L3;;chr3:150126759..150126784,+!p2@TSC22D2!0.45!11.24!TSC22D2;;chr10:51565156..51565167,+!p5@NCOA4!0.45!7.42!NCOA4;;chr15:100106244..100106259,+!p2@MEF2A!0.45!5.39!MEF2A;;chr7:86781778..86781789,+!p4@DMTF1!0.45!4.49!DMTF1;;chr19:33865009..33865090,+!p3@CEBPG!0.45!2.70!CEBPG;;chr4:81104865..81104886,+!p6@PRDM8!0.45!2.02!PRDM8;;chr2:157189317..157189325,-!p8@NR4A2!0.45!1.80!NR4A2;;chr19:54041534..54041545,+!p11@ZNF331!0.45!1.80!ZNF331;;chr1:221054853..221054873,+!p9@HLX!0.45!1.80!HLX;;chr10:124768217..124768228,-!p2@IKZF5!0.45!1.80!IKZF5;;chr10:63661004..63661019,+!p15@ARID5B!0.45!1.80!ARID5B;;chr12:57914742..57914754,+!p14@MBD6!0.45!1.80!MBD6;;chr6:20403997..20404008,+!p7@E2F3!0.45!1.80!E2F3;;chr6:44232765..44232778,-!p5@NFKBIE!0.45!1.80!NFKBIE;;chr9:110250629..110250642,-!p7@KLF4!0.45!1.80!KLF4;;chr7:99097863..99097936,-!p1@ZNF394!0.44!24.72!ZNF394;;chr14:58765217..58765301,+!p1@ARID4A!0.44!22.25!ARID4A;;chr19:9546177..9546224,-!p1@ZNF266!0.44!17.53!ZNF266;;chr1:155532531..155532605,-!p1@ASH1L!0.44!16.63!ASH1L;;chr1:161736140..161736151,+!p3@ATF6!0.44!7.19!ATF6;;chr7:104654690..104654704,+!p2@MLL5!0.44!4.27!MLL5;;chr17:40440225..40440268,+!p3@STAT5A!0.44!2.47!STAT5A;;chr22:29196030..29196075,-!p5@XBP1!0.44!2.47!XBP1;;chr17:30677160..30677200,+!p1@ZNF207!0.43!355.96!ZNF207;;chr18:32924372..32924430,-!p1@ZNF24!0.43!75.51!ZNF24;;chr10:63661437..63661465,+!p2@ARID5B!0.43!45.84!ARID5B;;chr17:1958388..1958404,+!p1@HIC1!0.43!15.06!HIC1;;chrX:83757450..83757485,-!p1@HDX!0.43!9.89!HDX;;chr4:87928142..87928165,+!p5@AFF1!0.43!7.87!AFF1;;chr6:7108179..7108199,+!p4@RREB1!0.43!4.27!RREB1;;chr19:45261992..45262010,+!p9@BCL3!0.43!2.70!BCL3;;chr1:6684918..6684936,+!p2@THAP3!0.43!2.25!THAP3;;chr19:16435625..16435682,+!p1@KLF2!0.42!76.86!KLF2;;chr11:10879593..10879620,-!p1@ZBED5!0.42!73.93!ZBED5;;chr1:235491462..235491510,-!p1@ARID4B!0.42!42.92!ARID4B;;chr16:31085714..31085783,+!p1@ZNF646!0.42!38.43!ZNF646;;chr7:152133059..152133102,-!p1@MLL3!0.42!37.75!MLL3;;chr12:133657477..133657529,+!p1@ZNF140!0.42!18.20!ZNF140;;chr1:28995258..28995322,+!p1@GMEB1!0.42!17.75!GMEB1;;chr4:87928413..87928433,+!p3@AFF1!0.42!14.16!AFF1;;chr14:74226747..74226779,-!p3@C14orf43!0.42!12.81!C14orf43;;chr16:3285144..3285191,-!p1@ZNF200!0.42!11.01!ZNF200;;chr3:101395936..101395962,-!p2@ZBTB11!0.42!8.76!ZBTB11;;chr22:38598057..38598071,+!p3@MAFF!0.42!4.94!MAFF;;chr1:935398..935465,-!p2@HES4!0.42!4.27!HES4;;chr9:4299979..4299996,-!p3@GLIS3!0.42!3.15!GLIS3;;chr1:247095162..247095173,-!p3@AHCTF1!0.42!2.92!AHCTF1;;chr2:174830540..174830563,-!p8@SP3!0.42!2.70!SP3;;chr14:62193465..62193490,+!p7@HIF1A!0.42!2.70!HIF1A;;chr5:137801160..137801176,+!p1@EGR1!0.41!231.47!EGR1;;chr20:46130619..46130664,+!p1@NCOA3!0.41!62.70!NCOA3;;chrX:153363125..153363182,-!p1@MECP2!0.41!62.02!MECP2;;chr10:98592009..98592061,+!p1@C10orf12,p1@LCOR!0.41!33.03!LCOR;;chr11:13299319..13299424,+!p1@ARNTL!0.41!22.92!ARNTL;;chr4:18023350..18023385,-!p1@LCORL!0.41!19.10!LCORL;;chr5:142784003..142784065,-!p2@NR3C1!0.41!18.65!NR3C1;;chrX:129244840..129244881,-!p2@ELF4!0.41!8.31!ELF4;;chr21:36259445..36259519,-!p4@RUNX1!0.41!5.84!RUNX1;;chr3:5021191..5021202,+!p3@BHLHE40!0.41!5.62!BHLHE40;;chr2:145275109..145275128,-!p6@ZEB2!0.41!4.49!ZEB2;;chr14:100705587..100705600,+!p5@YY1!0.41!3.60!YY1;;chr21:36231861..36231877,-!p12@RUNX1!0.41!2.25!RUNX1;;chr8:116681247..116681261,-!p8@TRPS1!0.41!2.25!TRPS1;;chr7:28725715..28725727,+!p3@CREB5!0.41!2.02!CREB5;;chr18:3448314..3448333,+!p18@TGIF1!0.41!1.80!TGIF1;;chr17:38020392..38020477,-!p1@IKZF3!0.41!1.57!IKZF3;;chr17:38487239..38487261,+!p12@RARA!0.41!1.57!RARA;;chr17:38487563..38487578,+!p10@RARA!0.41!1.57!RARA;;chr5:142814316..142814335,-!p18@NR3C1!0.41!1.57!NR3C1;;chr6:20404061..20404072,+!p10@E2F3!0.41!1.57!E2F3;;chr6:36355431..36355466,-!p1@ETV7!0.41!1.57!ETV7;;chr7:106810484..106810494,+!p4@HBP1!0.41!1.57!HBP1;;chr7:50344251..50344288,+!p3@IKZF1!0.41!1.57!IKZF1;;chr8:103668114..103668134,-!p5@KLF10!0.41!1.57!KLF10;;chr12:52448151..52448200,+!p8@NR4A1!0.41!1.57!NR4A1;;chr12:8309727..8309742,+!p@chr12:8309727..8309742,+!0.41!1.57!ZNF705A;;chr13:72440901..72440968,-!p4@DACH1!0.41!1.57!DACH1;;chrX:153305962..153305995,-!p5@MECP2!0.41!1.57!MECP2;;chr19:45971060..45971122,+!p3@FOSB!0.41!1.57!FOSB;;chr19:45977993..45978005,+!p6@FOSB!0.41!1.57!FOSB;;chr1:221053526..221053540,+!p13@HLX!0.41!1.57!HLX;;chr20:48808064..48808086,+!p15@CEBPB!0.41!1.57!CEBPB;;chr20:56195474..56195506,-!p1@ZBP1!0.41!1.57!ZBP1;;chr21:36421147..36421193,-!p10@RUNX1!0.41!1.57!RUNX1;;chr2:145275947..145275981,-!p10@ZEB2!0.41!1.57!ZEB2;;chr2:145276113..145276149,-!p28@ZEB2!0.41!1.57!ZEB2;;chr2:145277792..145277808,-!p15@ZEB2!0.41!1.57!ZEB2;;chr2:157189101..157189111,-!p15@NR4A2!0.41!1.57!NR4A2;;chr2:70166128..70166141,+!p9@MXD1!0.41!1.57!MXD1;;chr3:12392972..12392983,+!p16@PPARG!0.41!1.57!PPARG;;chr3:69811858..69811881,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|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
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Line 66: Line 41:
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|library_id=CNhs13546
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11887
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11887
|name=CD14+ monocytes - treated with Cryptococcus, donor3
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|rna_box=125
|rna_catalog_number=
|rna_concentration=0.35721
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=D5-8
|rna_od260/230=0.89
|rna_od260/280=2
|rna_position=D6
|rna_rin=9.4
|rna_sample_type=total RNA
|rna_tube_id=125D6
|rna_weight_ug=1.607445
|sample_age=21
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=monocyte
|sample_collaboration=Christine Wells (University of Queensland)
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor3
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.77531888713258e-257!GO:0005737;cytoplasm;2.68679506871389e-130!GO:0043227;membrane-bound organelle;6.72566596763532e-129!GO:0043231;intracellular membrane-bound organelle;1.51993240013929e-128!GO:0043226;organelle;3.65289055557698e-119!GO:0043229;intracellular organelle;2.40626143268459e-118!GO:0044444;cytoplasmic part;2.22640926261565e-87!GO:0044422;organelle part;2.31139219646976e-75!GO:0044446;intracellular organelle part;1.01047361857133e-73!GO:0044237;cellular metabolic process;9.83599492083908e-70!GO:0044238;primary metabolic process;7.61072853754815e-68!GO:0005515;protein binding;8.9535404573209e-68!GO:0043170;macromolecule metabolic process;1.31591146240516e-66!GO:0032991;macromolecular complex;1.07722992510055e-64!GO:0003723;RNA binding;2.02598056824635e-59!GO:0030529;ribonucleoprotein complex;4.5421157893349e-59!GO:0005634;nucleus;7.24664917272153e-54!GO:0044428;nuclear part;1.63149960226798e-52!GO:0019538;protein metabolic process;9.59103654356785e-48!GO:0033036;macromolecule localization;7.98787583549189e-45!GO:0006412;translation;1.08166762892018e-44!GO:0044267;cellular protein metabolic process;1.08166762892018e-44!GO:0044260;cellular macromolecule metabolic process;1.70692480757698e-44!GO:0043233;organelle lumen;1.35593578488885e-43!GO:0031974;membrane-enclosed lumen;1.35593578488885e-43!GO:0045184;establishment of protein localization;2.09093860472081e-43!GO:0015031;protein transport;2.09093860472081e-43!GO:0008104;protein localization;1.3170276013101e-41!GO:0005829;cytosol;3.03715829886372e-38!GO:0043283;biopolymer metabolic process;3.24958297778316e-37!GO:0010467;gene expression;5.30016558859128e-37!GO:0006396;RNA processing;2.20936630666167e-36!GO:0016071;mRNA metabolic process;2.08063672229462e-34!GO:0031090;organelle membrane;3.07157924546358e-34!GO:0031981;nuclear lumen;1.84256808994468e-33!GO:0009059;macromolecule biosynthetic process;1.88447800581427e-33!GO:0008380;RNA splicing;1.35802979850157e-31!GO:0043234;protein complex;1.52895309176652e-31!GO:0005739;mitochondrion;2.26363042146034e-31!GO:0044249;cellular biosynthetic process;2.47834127664443e-31!GO:0009058;biosynthetic process;2.80925313108556e-31!GO:0005840;ribosome;5.12557364148052e-31!GO:0006915;apoptosis;8.67982087173236e-31!GO:0012501;programmed cell death;1.1604566467772e-30!GO:0006397;mRNA processing;2.69709695216214e-30!GO:0046907;intracellular transport;1.75715882490017e-29!GO:0008219;cell death;5.13751724981915e-29!GO:0016265;death;5.13751724981915e-29!GO:0006886;intracellular protein transport;5.4058139005897e-29!GO:0003735;structural constituent of ribosome;1.03791698698426e-28!GO:0016043;cellular component organization and biogenesis;7.2929083597737e-28!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.9833998064952e-27!GO:0031967;organelle envelope;7.5666677744119e-27!GO:0031975;envelope;1.47107667735223e-26!GO:0033279;ribosomal subunit;1.48265009297004e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.21191505909323e-25!GO:0044445;cytosolic part;1.35211802790451e-23!GO:0005681;spliceosome;1.59101520172252e-23!GO:0005654;nucleoplasm;2.57011338233721e-23!GO:0044429;mitochondrial part;3.80631885403802e-23!GO:0051649;establishment of cellular localization;1.0478932459406e-22!GO:0065003;macromolecular complex assembly;3.43942918987388e-22!GO:0051641;cellular localization;5.04618884769187e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.01854958657929e-21!GO:0042981;regulation of apoptosis;7.85483127310245e-20!GO:0043067;regulation of programmed cell death;1.56187264394953e-19!GO:0044451;nucleoplasm part;2.65401645592537e-19!GO:0000166;nucleotide binding;7.71188270594202e-19!GO:0006119;oxidative phosphorylation;1.26119733116115e-18!GO:0022607;cellular component assembly;2.11076522666416e-18!GO:0008134;transcription factor binding;2.84965201529679e-18!GO:0044265;cellular macromolecule catabolic process;6.37932630549384e-18!GO:0016192;vesicle-mediated transport;7.64642006578846e-18!GO:0005740;mitochondrial envelope;2.20070262687659e-17!GO:0006512;ubiquitin cycle;3.24093656545807e-17!GO:0022618;protein-RNA complex assembly;3.61781550560249e-17!GO:0003676;nucleic acid binding;4.44533539074172e-17!GO:0048770;pigment granule;7.53510416926414e-17!GO:0042470;melanosome;7.53510416926414e-17!GO:0019866;organelle inner membrane;8.91988785772661e-17!GO:0031966;mitochondrial membrane;9.18354260256619e-17!GO:0016070;RNA metabolic process;2.38471289733861e-16!GO:0007243;protein kinase cascade;2.60693899612453e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.61206011142053e-16!GO:0016462;pyrophosphatase activity;3.87943451406341e-16!GO:0043285;biopolymer catabolic process;4.18357911188061e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.43211189047953e-16!GO:0017111;nucleoside-triphosphatase activity;6.48576409956056e-16!GO:0043412;biopolymer modification;9.98184722383125e-16!GO:0019941;modification-dependent protein catabolic process;1.3209347655993e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.3209347655993e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.5801823496806e-15!GO:0044257;cellular protein catabolic process;1.71773048771553e-15!GO:0006511;ubiquitin-dependent protein catabolic process;2.14067676866435e-15!GO:0006605;protein targeting;7.20125693157645e-15!GO:0016604;nuclear body;7.20125693157645e-15!GO:0009057;macromolecule catabolic process;1.15614127382072e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.2172676476946e-14!GO:0048523;negative regulation of cellular process;1.2172676476946e-14!GO:0006464;protein modification process;1.85389748128457e-14!GO:0005773;vacuole;2.19214550632047e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.2938049541746e-14!GO:0015934;large ribosomal subunit;2.32946631418832e-14!GO:0005743;mitochondrial inner membrane;4.79747241129826e-14!GO:0044248;cellular catabolic process;4.9790380586973e-14!GO:0006996;organelle organization and biogenesis;6.15112230832452e-14!GO:0016874;ligase activity;7.22013806990277e-14!GO:0044455;mitochondrial membrane part;9.12796438189873e-14!GO:0043687;post-translational protein modification;1.20867955989874e-13!GO:0050794;regulation of cellular process;1.26633270065031e-13!GO:0032553;ribonucleotide binding;1.75074888248206e-13!GO:0032555;purine ribonucleotide binding;1.75074888248206e-13!GO:0008135;translation factor activity, nucleic acid binding;2.54041257692629e-13!GO:0016607;nuclear speck;2.82957854960025e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.08529107614664e-13!GO:0006913;nucleocytoplasmic transport;3.94764678445259e-13!GO:0007242;intracellular signaling cascade;3.95852626086101e-13!GO:0030163;protein catabolic process;4.48420288589372e-13!GO:0015935;small ribosomal subunit;4.49346354985572e-13!GO:0048519;negative regulation of biological process;5.15484980027016e-13!GO:0043069;negative regulation of programmed cell death;5.47514808223952e-13!GO:0043066;negative regulation of apoptosis;6.50164552806748e-13!GO:0017076;purine nucleotide binding;6.91809522063487e-13!GO:0051169;nuclear transport;7.50190804584182e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.17686087045461e-13!GO:0000323;lytic vacuole;9.84165961755822e-13!GO:0005764;lysosome;9.84165961755822e-13!GO:0006457;protein folding;9.89466313008631e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.47607221633381e-12!GO:0012505;endomembrane system;2.82906081513374e-12!GO:0006413;translational initiation;5.6616021104598e-12!GO:0003743;translation initiation factor activity;5.87902439930998e-12!GO:0005794;Golgi apparatus;9.45040717746273e-12!GO:0051246;regulation of protein metabolic process;1.21211695403045e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.23163991964077e-11!GO:0006259;DNA metabolic process;1.35505863371645e-11!GO:0005768;endosome;1.53960419981235e-11!GO:0003712;transcription cofactor activity;1.93652876795759e-11!GO:0065009;regulation of a molecular function;2.09341073038161e-11!GO:0006950;response to stress;3.37576755494397e-11!GO:0006793;phosphorus metabolic process;4.34176379154308e-11!GO:0006796;phosphate metabolic process;4.34176379154308e-11!GO:0051186;cofactor metabolic process;4.97721396641052e-11!GO:0005746;mitochondrial respiratory chain;5.06054454468433e-11!GO:0006446;regulation of translational initiation;5.86557860112615e-11!GO:0051082;unfolded protein binding;7.28022443894388e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.3938259781186e-10!GO:0050789;regulation of biological process;1.51950284354434e-10!GO:0005730;nucleolus;1.64905767146785e-10!GO:0002376;immune system process;1.86005734029857e-10!GO:0006916;anti-apoptosis;2.1594629520098e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.77455939950352e-10!GO:0048193;Golgi vesicle transport;2.9738110724985e-10!GO:0050136;NADH dehydrogenase (quinone) activity;3.30365499416465e-10!GO:0003954;NADH dehydrogenase activity;3.30365499416465e-10!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.30365499416465e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;3.48153240324722e-10!GO:0000375;RNA splicing, via transesterification reactions;3.48153240324722e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.48153240324722e-10!GO:0006366;transcription from RNA polymerase II promoter;3.90895897413219e-10!GO:0006732;coenzyme metabolic process;4.97304485115263e-10!GO:0016310;phosphorylation;8.63560216094277e-10!GO:0016787;hydrolase activity;1.056296092362e-09!GO:0019829;cation-transporting ATPase activity;1.1529665860714e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.28125019212343e-09!GO:0005635;nuclear envelope;1.54062926763988e-09!GO:0005524;ATP binding;2.15778549689701e-09!GO:0017038;protein import;2.56486742897335e-09!GO:0008639;small protein conjugating enzyme activity;2.80354889826944e-09!GO:0009056;catabolic process;3.0476341102396e-09!GO:0015986;ATP synthesis coupled proton transport;3.05534918739173e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.05534918739173e-09!GO:0032559;adenyl ribonucleotide binding;3.87848800577621e-09!GO:0048522;positive regulation of cellular process;4.75050413102323e-09!GO:0019787;small conjugating protein ligase activity;4.9208969733507e-09!GO:0031324;negative regulation of cellular metabolic process;4.94422535789963e-09!GO:0004842;ubiquitin-protein ligase activity;4.97544996833011e-09!GO:0007049;cell cycle;4.97544996833011e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.00670521800666e-09!GO:0065007;biological regulation;5.00710743334308e-09!GO:0042775;organelle ATP synthesis coupled electron transport;6.96292796512746e-09!GO:0042773;ATP synthesis coupled electron transport;6.96292796512746e-09!GO:0009967;positive regulation of signal transduction;1.10812058767922e-08!GO:0044453;nuclear membrane part;1.14217646748151e-08!GO:0030964;NADH dehydrogenase complex (quinone);1.16055270943854e-08!GO:0045271;respiratory chain complex I;1.16055270943854e-08!GO:0005747;mitochondrial respiratory chain complex I;1.16055270943854e-08!GO:0006163;purine nucleotide metabolic process;1.19497099294176e-08!GO:0005770;late endosome;1.28412113422991e-08!GO:0009615;response to virus;1.28529872136228e-08!GO:0006164;purine nucleotide biosynthetic process;1.31090200032257e-08!GO:0006417;regulation of translation;1.31225700310463e-08!GO:0009150;purine ribonucleotide metabolic process;1.42997035956541e-08!GO:0030554;adenyl nucleotide binding;1.43036731865417e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.43442715282754e-08!GO:0042623;ATPase activity, coupled;1.46801287028213e-08!GO:0006955;immune response;1.57172707160157e-08!GO:0009055;electron carrier activity;1.81890544906774e-08!GO:0005783;endoplasmic reticulum;2.15960138544675e-08!GO:0016887;ATPase activity;2.20721420389794e-08!GO:0051170;nuclear import;2.325859882913e-08!GO:0009259;ribonucleotide metabolic process;2.61731048438277e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.65196396002505e-08!GO:0031965;nuclear membrane;2.89125659099885e-08!GO:0043228;non-membrane-bound organelle;3.04712777918843e-08!GO:0043232;intracellular non-membrane-bound organelle;3.04712777918843e-08!GO:0043065;positive regulation of apoptosis;3.17899818015621e-08!GO:0048518;positive regulation of biological process;3.77811646639991e-08!GO:0008565;protein transporter activity;3.93856796179409e-08!GO:0006754;ATP biosynthetic process;4.01843355515206e-08!GO:0006753;nucleoside phosphate metabolic process;4.01843355515206e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.13924133921897e-08!GO:0050790;regulation of catalytic activity;4.24447150377052e-08!GO:0043068;positive regulation of programmed cell death;4.27261600826952e-08!GO:0006606;protein import into nucleus;6.01498110899404e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.1441906832514e-08!GO:0009260;ribonucleotide biosynthetic process;6.14570800108732e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.40809831767333e-08!GO:0016881;acid-amino acid ligase activity;8.39386217355174e-08!GO:0009892;negative regulation of metabolic process;1.15890507119815e-07!GO:0050657;nucleic acid transport;1.15890507119815e-07!GO:0051236;establishment of RNA localization;1.15890507119815e-07!GO:0050658;RNA transport;1.15890507119815e-07!GO:0051726;regulation of cell cycle;1.16953397978841e-07!GO:0000074;regulation of progression through cell cycle;1.60498081144923e-07!GO:0006403;RNA localization;1.60600769820549e-07!GO:0031980;mitochondrial lumen;1.63505908609403e-07!GO:0005759;mitochondrial matrix;1.63505908609403e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.68235876265036e-07!GO:0005774;vacuolar membrane;1.69715259546134e-07!GO:0019222;regulation of metabolic process;1.75206098741268e-07!GO:0046034;ATP metabolic process;1.75206098741268e-07!GO:0009889;regulation of biosynthetic process;1.76384746942609e-07!GO:0003924;GTPase activity;1.79293053604736e-07!GO:0003713;transcription coactivator activity;1.81959568642365e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.87245311855353e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.87245311855353e-07!GO:0008047;enzyme activator activity;2.1101190926575e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.4870327903676e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.4870327903676e-07!GO:0005525;GTP binding;2.84715799264266e-07!GO:0019899;enzyme binding;2.93279554865333e-07!GO:0016481;negative regulation of transcription;3.02654689565124e-07!GO:0031326;regulation of cellular biosynthetic process;3.10865133484727e-07!GO:0009607;response to biotic stimulus;3.86382693822374e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.98266700724198e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.98266700724198e-07!GO:0016564;transcription repressor activity;4.35416280691481e-07!GO:0006917;induction of apoptosis;4.67694411777513e-07!GO:0048468;cell development;4.85428782377994e-07!GO:0005643;nuclear pore;4.9098361574092e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.9098361574092e-07!GO:0045786;negative regulation of progression through cell cycle;5.07116858674262e-07!GO:0006752;group transfer coenzyme metabolic process;5.07290051689403e-07!GO:0006974;response to DNA damage stimulus;5.94436460946422e-07!GO:0006461;protein complex assembly;6.20303478710108e-07!GO:0012502;induction of programmed cell death;6.20303478710108e-07!GO:0051188;cofactor biosynthetic process;6.25367568929523e-07!GO:0009108;coenzyme biosynthetic process;6.34472999224139e-07!GO:0044437;vacuolar part;8.53386657170156e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.6978690436605e-07!GO:0009141;nucleoside triphosphate metabolic process;8.73395025631275e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.77848826372636e-07!GO:0005765;lysosomal membrane;1.19436318694217e-06!GO:0044432;endoplasmic reticulum part;1.26484336649484e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.26484336649484e-06!GO:0005793;ER-Golgi intermediate compartment;1.28531790031562e-06!GO:0044440;endosomal part;1.32392907789488e-06!GO:0010008;endosome membrane;1.32392907789488e-06!GO:0016197;endosome transport;1.39005820877476e-06!GO:0007264;small GTPase mediated signal transduction;1.78915050306263e-06!GO:0032446;protein modification by small protein conjugation;1.82087737748988e-06!GO:0016568;chromatin modification;1.88411797617664e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.97900650260552e-06!GO:0051028;mRNA transport;2.04120398181806e-06!GO:0004386;helicase activity;2.27912817509356e-06!GO:0031982;vesicle;2.31730420737228e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.7780161633157e-06!GO:0004298;threonine endopeptidase activity;3.1416142910413e-06!GO:0008026;ATP-dependent helicase activity;3.18715311651808e-06!GO:0016567;protein ubiquitination;3.97622701233702e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.39466561807326e-06!GO:0032561;guanyl ribonucleotide binding;4.44953960910212e-06!GO:0019001;guanyl nucleotide binding;4.44953960910212e-06!GO:0006281;DNA repair;6.7110895376199e-06!GO:0016563;transcription activator activity;6.97255874767015e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;7.08158555245899e-06!GO:0016044;membrane organization and biogenesis;7.11643546414718e-06!GO:0046930;pore complex;7.16322338047451e-06!GO:0042254;ribosome biogenesis and assembly;7.29689810968824e-06!GO:0065002;intracellular protein transport across a membrane;7.39796312600601e-06!GO:0022402;cell cycle process;7.89090379913502e-06!GO:0009966;regulation of signal transduction;1.03823973429122e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.09991361126848e-05!GO:0015399;primary active transmembrane transporter activity;1.09991361126848e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.14215990430845e-05!GO:0051789;response to protein stimulus;1.42827173733574e-05!GO:0006986;response to unfolded protein;1.42827173733574e-05!GO:0005789;endoplasmic reticulum membrane;1.54866632322656e-05!GO:0031410;cytoplasmic vesicle;1.56465354759851e-05!GO:0031988;membrane-bound vesicle;1.57984705421781e-05!GO:0006323;DNA packaging;1.62263030815398e-05!GO:0043566;structure-specific DNA binding;1.64818994656467e-05!GO:0031323;regulation of cellular metabolic process;1.71089493714075e-05!GO:0005769;early endosome;1.99645553660022e-05!GO:0031252;leading edge;2.15428173267488e-05!GO:0003724;RNA helicase activity;2.27597602401577e-05!GO:0005761;mitochondrial ribosome;2.39205353126252e-05!GO:0000313;organellar ribosome;2.39205353126252e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.56598913677361e-05!GO:0006613;cotranslational protein targeting to membrane;2.86222084371453e-05!GO:0009060;aerobic respiration;3.01223310512057e-05!GO:0008632;apoptotic program;3.17907816220596e-05!GO:0045259;proton-transporting ATP synthase complex;3.28282267182315e-05!GO:0048475;coated membrane;3.63419027972873e-05!GO:0030117;membrane coat;3.63419027972873e-05!GO:0031902;late endosome membrane;3.66013756626851e-05!GO:0003714;transcription corepressor activity;4.37014316117872e-05!GO:0030120;vesicle coat;4.87339942950486e-05!GO:0030662;coated vesicle membrane;4.87339942950486e-05!GO:0006401;RNA catabolic process;5.5650855473187e-05!GO:0016023;cytoplasmic membrane-bound vesicle;5.8650595564874e-05!GO:0003697;single-stranded DNA binding;5.96260566609895e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.96389785841738e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.98219707349989e-05!GO:0000245;spliceosome assembly;6.55668489973697e-05!GO:0051168;nuclear export;7.08657964793178e-05!GO:0030532;small nuclear ribonucleoprotein complex;7.13047831388936e-05!GO:0051427;hormone receptor binding;8.43159768666642e-05!GO:0030695;GTPase regulator activity;8.72256362123285e-05!GO:0005096;GTPase activator activity;8.72256362123285e-05!GO:0007005;mitochondrion organization and biogenesis;9.1599730019219e-05!GO:0009719;response to endogenous stimulus;9.49717382842136e-05!GO:0051276;chromosome organization and biogenesis;9.84534977519081e-05!GO:0022890;inorganic cation transmembrane transporter activity;0.000100593693267987!GO:0045333;cellular respiration;0.000101975077693541!GO:0051336;regulation of hydrolase activity;0.000102168548224876!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000112060477152395!GO:0006818;hydrogen transport;0.000113212527317247!GO:0032940;secretion by cell;0.000126575711663912!GO:0035257;nuclear hormone receptor binding;0.00014866774457494!GO:0006897;endocytosis;0.000172451348471727!GO:0010324;membrane invagination;0.000172451348471727!GO:0046822;regulation of nucleocytoplasmic transport;0.000177686833612188!GO:0015992;proton transport;0.000178214969489578!GO:0006399;tRNA metabolic process;0.000181433410344357!GO:0045892;negative regulation of transcription, DNA-dependent;0.000191777594651904!GO:0009117;nucleotide metabolic process;0.000204089761104923!GO:0043492;ATPase activity, coupled to movement of substances;0.000207564267308177!GO:0005885;Arp2/3 protein complex;0.000215043846821895!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000228099888111987!GO:0008234;cysteine-type peptidase activity;0.000238745736057999!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000251372642813096!GO:0008186;RNA-dependent ATPase activity;0.000260918922992869!GO:0010468;regulation of gene expression;0.000260926421676802!GO:0001816;cytokine production;0.000280429444101859!GO:0007050;cell cycle arrest;0.000280429444101859!GO:0000151;ubiquitin ligase complex;0.000296189393575231!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000297521828896267!GO:0004812;aminoacyl-tRNA ligase activity;0.000297521828896267!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000297521828896267!GO:0046519;sphingoid metabolic process;0.000345427990251469!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000365382906101426!GO:0001726;ruffle;0.000431232313108354!GO:0044431;Golgi apparatus part;0.00044300045905683!GO:0007034;vacuolar transport;0.000444557745063737!GO:0043038;amino acid activation;0.000446587091233713!GO:0006418;tRNA aminoacylation for protein translation;0.000446587091233713!GO:0043039;tRNA aminoacylation;0.000446587091233713!GO:0009893;positive regulation of metabolic process;0.00051642506583794!GO:0016072;rRNA metabolic process;0.00052379387321788!GO:0006402;mRNA catabolic process;0.000537037738672736!GO:0006612;protein targeting to membrane;0.000555906461547474!GO:0007040;lysosome organization and biogenesis;0.000559298974464496!GO:0006672;ceramide metabolic process;0.000593738019250089!GO:0007033;vacuole organization and biogenesis;0.000603003380206496!GO:0016740;transferase activity;0.000659998411497851!GO:0030036;actin cytoskeleton organization and biogenesis;0.000665798634832483!GO:0007041;lysosomal transport;0.000666680613611555!GO:0005083;small GTPase regulator activity;0.000669389624863802!GO:0051338;regulation of transferase activity;0.000680279836317195!GO:0006364;rRNA processing;0.000719429197840397!GO:0005798;Golgi-associated vesicle;0.00072317624583659!GO:0005057;receptor signaling protein activity;0.000751022383756838!GO:0004004;ATP-dependent RNA helicase activity;0.000762545001335517!GO:0008654;phospholipid biosynthetic process;0.000780720002808727!GO:0051223;regulation of protein transport;0.000830200937118385!GO:0016779;nucleotidyltransferase activity;0.000872828782139264!GO:0043623;cellular protein complex assembly;0.000883762131344453!GO:0006954;inflammatory response;0.00089188953683704!GO:0016251;general RNA polymerase II transcription factor activity;0.000896191315303012!GO:0005667;transcription factor complex;0.000906228610994834!GO:0004674;protein serine/threonine kinase activity;0.000908289785941374!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000908289785941374!GO:0051187;cofactor catabolic process;0.000915100950423306!GO:0030099;myeloid cell differentiation;0.000932598480952335!GO:0046983;protein dimerization activity;0.000957489918580654!GO:0007265;Ras protein signal transduction;0.00106179980345705!GO:0006099;tricarboxylic acid cycle;0.00106179980345705!GO:0046356;acetyl-CoA catabolic process;0.00106179980345705!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0010899861408523!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00124268775821207!GO:0051090;regulation of transcription factor activity;0.0012482872062914!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0012482872062914!GO:0006643;membrane lipid metabolic process;0.00126997252251206!GO:0043085;positive regulation of catalytic activity;0.00129009025758473!GO:0033157;regulation of intracellular protein transport;0.00136546407725462!GO:0042306;regulation of protein import into nucleus;0.00136546407725462!GO:0043549;regulation of kinase activity;0.00137836648897606!GO:0005637;nuclear inner membrane;0.00138395437133359!GO:0003729;mRNA binding;0.00152035590964303!GO:0022415;viral reproductive process;0.00153091393179497!GO:0030149;sphingolipid catabolic process;0.0015714074199765!GO:0006350;transcription;0.00158810883736825!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00162212446740177!GO:0006919;caspase activation;0.00165867018178734!GO:0043281;regulation of caspase activity;0.00174337608119656!GO:0033116;ER-Golgi intermediate compartment membrane;0.00190603881625686!GO:0043021;ribonucleoprotein binding;0.00193403233847213!GO:0031072;heat shock protein binding;0.00193896235668183!GO:0045859;regulation of protein kinase activity;0.00200226985404706!GO:0065004;protein-DNA complex assembly;0.00206723053880843!GO:0043280;positive regulation of caspase activity;0.00208857300275772!GO:0045454;cell redox homeostasis;0.00215099625365578!GO:0002757;immune response-activating signal transduction;0.00216851972960573!GO:0046966;thyroid hormone receptor binding;0.00236516219091872!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00242402439924987!GO:0006084;acetyl-CoA metabolic process;0.00263139382672871!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00266139699467558!GO:0006352;transcription initiation;0.00274979552067744!GO:0045893;positive regulation of transcription, DNA-dependent;0.00276919451160696!GO:0031901;early endosome membrane;0.00276919451160696!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00291377958857996!GO:0016363;nuclear matrix;0.00302358532070535!GO:0045941;positive regulation of transcription;0.00303448138078604!GO:0009109;coenzyme catabolic process;0.00316627749096013!GO:0043087;regulation of GTPase activity;0.00327142503735557!GO:0005741;mitochondrial outer membrane;0.00327142503735557!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00327142503735557!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00327142503735557!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00327142503735557!GO:0009165;nucleotide biosynthetic process;0.00327142503735557!GO:0044262;cellular carbohydrate metabolic process;0.00333144852855934!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00353648588810277!GO:0048487;beta-tubulin binding;0.00353972335191697!GO:0006091;generation of precursor metabolites and energy;0.00354457649995897!GO:0042990;regulation of transcription factor import into nucleus;0.00361875760481887!GO:0042991;transcription factor import into nucleus;0.00361875760481887!GO:0051707;response to other organism;0.00363052381371845!GO:0005813;centrosome;0.00368457294747447!GO:0003690;double-stranded DNA binding;0.00377439263239551!GO:0060090;molecular adaptor activity;0.00384767420352542!GO:0006891;intra-Golgi vesicle-mediated transport;0.00414740206867002!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00415481327564164!GO:0018193;peptidyl-amino acid modification;0.00415704324152048!GO:0045045;secretory pathway;0.00431789732250058!GO:0031325;positive regulation of cellular metabolic process;0.00434556192944718!GO:0002764;immune response-regulating signal transduction;0.004606327549579!GO:0004197;cysteine-type endopeptidase activity;0.00470376356203368!GO:0030029;actin filament-based process;0.00517114632443983!GO:0045321;leukocyte activation;0.0052206307574309!GO:0002274;myeloid leukocyte activation;0.00532932102381684!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00555335734789327!GO:0006368;RNA elongation from RNA polymerase II promoter;0.00589755071367077!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00639160185287779!GO:0033367;protein localization in mast cell secretory granule;0.00647250559920841!GO:0033365;protein localization in organelle;0.00647250559920841!GO:0033371;T cell secretory granule organization and biogenesis;0.00647250559920841!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00647250559920841!GO:0033375;protease localization in T cell secretory granule;0.00647250559920841!GO:0042629;mast cell granule;0.00647250559920841!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00647250559920841!GO:0033364;mast cell secretory granule organization and biogenesis;0.00647250559920841!GO:0033380;granzyme B localization in T cell secretory granule;0.00647250559920841!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00647250559920841!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00647250559920841!GO:0033368;protease localization in mast cell secretory granule;0.00647250559920841!GO:0033366;protein localization in secretory granule;0.00647250559920841!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00647250559920841!GO:0033374;protein localization in T cell secretory granule;0.00647250559920841!GO:0045637;regulation of myeloid cell differentiation;0.00649855057131272!GO:0019904;protein domain specific binding;0.00654088271643708!GO:0048500;signal recognition particle;0.00663523157659247!GO:0005484;SNAP receptor activity;0.00667836386129146!GO:0030097;hemopoiesis;0.00673518524794825!GO:0019867;outer membrane;0.00674746760282819!GO:0005099;Ras GTPase activator activity;0.00680924929317776!GO:0031968;organelle outer membrane;0.00698599593910103!GO:0042802;identical protein binding;0.00713901478079801!GO:0043433;negative regulation of transcription factor activity;0.00716468981184665!GO:0019377;glycolipid catabolic process;0.00720880997799755!GO:0000139;Golgi membrane;0.00773377738972736!GO:0001817;regulation of cytokine production;0.00802501588866808!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0081111080707588!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00828190283374505!GO:0006611;protein export from nucleus;0.0083471488210372!GO:0032386;regulation of intracellular transport;0.00921064933752049!GO:0004185;serine carboxypeptidase activity;0.00929451898583257!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00981369881683941!GO:0045047;protein targeting to ER;0.00981369881683941!GO:0006665;sphingolipid metabolic process;0.0102067578871733!GO:0019079;viral genome replication;0.0103387250602945!GO:0008383;manganese superoxide dismutase activity;0.0106647410355116!GO:0001315;age-dependent response to reactive oxygen species;0.0106647410355116!GO:0016791;phosphoric monoester hydrolase activity;0.0109874290261244!GO:0005815;microtubule organizing center;0.0111944631914528!GO:0006952;defense response;0.0113955435892502!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0117336625285286!GO:0000339;RNA cap binding;0.012078548179244!GO:0006458;'de novo' protein folding;0.0125050488314613!GO:0051084;'de novo' posttranslational protein folding;0.0125050488314613!GO:0007259;JAK-STAT cascade;0.012685078043021!GO:0046479;glycosphingolipid catabolic process;0.0127845069407736!GO:0030134;ER to Golgi transport vesicle;0.0128007942010742!GO:0031625;ubiquitin protein ligase binding;0.0131671108229918!GO:0016301;kinase activity;0.0138320740144984!GO:0006607;NLS-bearing substrate import into nucleus;0.013836259924634!GO:0048471;perinuclear region of cytoplasm;0.0139908676164219!GO:0051252;regulation of RNA metabolic process;0.0140335566409243!GO:0046467;membrane lipid biosynthetic process;0.0142226106056645!GO:0030041;actin filament polymerization;0.0146570084989533!GO:0005048;signal sequence binding;0.0148960385024836!GO:0030127;COPII vesicle coat;0.0148960385024836!GO:0012507;ER to Golgi transport vesicle membrane;0.0148960385024836!GO:0008312;7S RNA binding;0.0149018471134027!GO:0000209;protein polyubiquitination;0.0151544382504461!GO:0050811;GABA receptor binding;0.0151772406243682!GO:0000278;mitotic cell cycle;0.0152626197173652!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0156379017244714!GO:0051345;positive regulation of hydrolase activity;0.0159395834929514!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0159435981958487!GO:0001819;positive regulation of cytokine production;0.0162737587520453!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0163348253823419!GO:0043022;ribosome binding;0.016645710820584!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0169201469795554!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0169201469795554!GO:0006749;glutathione metabolic process;0.0170669506987089!GO:0000082;G1/S transition of mitotic cell cycle;0.0178582509433892!GO:0004177;aminopeptidase activity;0.0179816146405587!GO:0051098;regulation of binding;0.018333953695805!GO:0019843;rRNA binding;0.0186628611299639!GO:0000287;magnesium ion binding;0.0187030106865543!GO:0008270;zinc ion binding;0.0187138587553914!GO:0030663;COPI coated vesicle membrane;0.0187798462994253!GO:0030126;COPI vesicle coat;0.0187798462994253!GO:0043621;protein self-association;0.0192753313949063!GO:0030521;androgen receptor signaling pathway;0.0193275538735727!GO:0006333;chromatin assembly or disassembly;0.0196678786386579!GO:0030503;regulation of cell redox homeostasis;0.0196678786386579!GO:0005694;chromosome;0.0196678786386579!GO:0006414;translational elongation;0.0196727260712166!GO:0008637;apoptotic mitochondrial changes;0.0200744166811106!GO:0008624;induction of apoptosis by extracellular signals;0.020358699096296!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.020358699096296!GO:0002819;regulation of adaptive immune response;0.020358699096296!GO:0033033;negative regulation of myeloid cell apoptosis;0.020358699096296!GO:0001803;regulation of type III hypersensitivity;0.020358699096296!GO:0032733;positive regulation of interleukin-10 production;0.020358699096296!GO:0033025;regulation of mast cell apoptosis;0.020358699096296!GO:0001805;positive regulation of type III hypersensitivity;0.020358699096296!GO:0033023;mast cell homeostasis;0.020358699096296!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.020358699096296!GO:0033032;regulation of myeloid cell apoptosis;0.020358699096296!GO:0001802;type III hypersensitivity;0.020358699096296!GO:0033028;myeloid cell apoptosis;0.020358699096296!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.020358699096296!GO:0033026;negative regulation of mast cell apoptosis;0.020358699096296!GO:0033024;mast cell apoptosis;0.020358699096296!GO:0006354;RNA elongation;0.020358699096296!GO:0030258;lipid modification;0.020358699096296!GO:0046466;membrane lipid catabolic process;0.0203742188054535!GO:0051092;activation of NF-kappaB transcription factor;0.0208126116866096!GO:0030658;transport vesicle membrane;0.0208972530000085!GO:0051087;chaperone binding;0.0208972530000085!GO:0008139;nuclear localization sequence binding;0.0210048067249992!GO:0032763;regulation of mast cell cytokine production;0.0210929539959834!GO:0032762;mast cell cytokine production;0.0210929539959834!GO:0003725;double-stranded RNA binding;0.0220565853112877!GO:0002521;leukocyte differentiation;0.0227626976423991!GO:0003711;transcription elongation regulator activity;0.0231218164899055!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0232870554976748!GO:0046483;heterocycle metabolic process;0.0236922857665483!GO:0043681;protein import into mitochondrion;0.0237150186679147!GO:0048146;positive regulation of fibroblast proliferation;0.0237979771689488!GO:0006516;glycoprotein catabolic process;0.0239582227856453!GO:0000049;tRNA binding;0.0239582227856453!GO:0006468;protein amino acid phosphorylation;0.0243619167469541!GO:0015036;disulfide oxidoreductase activity;0.0246602351438392!GO:0019058;viral infectious cycle;0.0248857509058049!GO:0006405;RNA export from nucleus;0.0250214325687399!GO:0016272;prefoldin complex;0.0250214325687399!GO:0042110;T cell activation;0.0251578516014086!GO:0032318;regulation of Ras GTPase activity;0.0251861916367801!GO:0030137;COPI-coated vesicle;0.0260257669224134!GO:0019882;antigen processing and presentation;0.0260741058578089!GO:0006260;DNA replication;0.0265574197191589!GO:0030867;rough endoplasmic reticulum membrane;0.0267265787489068!GO:0051101;regulation of DNA binding;0.0267265787489068!GO:0030518;steroid hormone receptor signaling pathway;0.0268579865813496!GO:0045449;regulation of transcription;0.0270265254058509!GO:0005669;transcription factor TFIID complex;0.0271051555721471!GO:0005070;SH3/SH2 adaptor activity;0.0271051555721471!GO:0051059;NF-kappaB binding;0.0276563329324855!GO:0006650;glycerophospholipid metabolic process;0.0277417416261062!GO:0006351;transcription, DNA-dependent;0.0277492553876158!GO:0000785;chromatin;0.0277492553876158!GO:0006626;protein targeting to mitochondrion;0.0277492553876158!GO:0030176;integral to endoplasmic reticulum membrane;0.028012408406288!GO:0032774;RNA biosynthetic process;0.0282485153075377!GO:0008320;protein transmembrane transporter activity;0.0287431055481519!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0291648020154807!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0291648020154807!GO:0045576;mast cell activation;0.0300566665308734!GO:0050851;antigen receptor-mediated signaling pathway;0.0302072875915177!GO:0006914;autophagy;0.0303769326022752!GO:0008538;proteasome activator activity;0.0309260625645915!GO:0002440;production of molecular mediator of immune response;0.0309260625645915!GO:0007006;mitochondrial membrane organization and biogenesis;0.0309353850507109!GO:0035035;histone acetyltransferase binding;0.0309493256546599!GO:0051052;regulation of DNA metabolic process;0.0311195037700537!GO:0030384;phosphoinositide metabolic process;0.0311195037700537!GO:0002444;myeloid leukocyte mediated immunity;0.0311195037700537!GO:0004722;protein serine/threonine phosphatase activity;0.0312419534916744!GO:0042348;NF-kappaB import into nucleus;0.0313413525622171!GO:0042345;regulation of NF-kappaB import into nucleus;0.0313413525622171!GO:0030027;lamellipodium;0.0318045056775605!GO:0006302;double-strand break repair;0.0319343449271503!GO:0030218;erythrocyte differentiation;0.0319394221315211!GO:0000119;mediator complex;0.0324269492582789!GO:0005149;interleukin-1 receptor binding;0.0326335220693053!GO:0000738;DNA catabolic process, exonucleolytic;0.0329052618762348!GO:0006383;transcription from RNA polymerase III promoter;0.0329406011589314!GO:0051085;chaperone cofactor-dependent protein folding;0.0335734887469148!GO:0046914;transition metal ion binding;0.0338172242193114!GO:0048144;fibroblast proliferation;0.0338172242193114!GO:0048145;regulation of fibroblast proliferation;0.0338172242193114!GO:0002467;germinal center formation;0.0343855439405625!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0345397306439623!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0345397306439623!GO:0030660;Golgi-associated vesicle membrane;0.0351576576012461!GO:0002224;toll-like receptor signaling pathway;0.0357547126588118!GO:0002221;pattern recognition receptor signaling pathway;0.0357547126588118!GO:0032760;positive regulation of tumor necrosis factor production;0.0357547126588118!GO:0009306;protein secretion;0.0357573582830002!GO:0008333;endosome to lysosome transport;0.0358630122015811!GO:0042613;MHC class II protein complex;0.035901168001826!GO:0051540;metal cluster binding;0.035901168001826!GO:0051536;iron-sulfur cluster binding;0.035901168001826!GO:0030433;ER-associated protein catabolic process;0.0360215417518635!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0360215417518635!GO:0019318;hexose metabolic process;0.0364851384747653!GO:0005869;dynactin complex;0.0365493148832468!GO:0043488;regulation of mRNA stability;0.0373193041242304!GO:0043487;regulation of RNA stability;0.0373193041242304!GO:0002718;regulation of cytokine production during immune response;0.0374372452245453!GO:0002367;cytokine production during immune response;0.0374372452245453!GO:0002700;regulation of production of molecular mediator of immune response;0.0374372452245453!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0375943992769575!GO:0030118;clathrin coat;0.0378507354886224!GO:0046649;lymphocyte activation;0.0381932578744167!GO:0016491;oxidoreductase activity;0.0382144724802812!GO:0006644;phospholipid metabolic process;0.0386247424176006!GO:0008625;induction of apoptosis via death domain receptors;0.0390724336398571!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0395976740253463!GO:0015002;heme-copper terminal oxidase activity;0.0395976740253463!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0395976740253463!GO:0004129;cytochrome-c oxidase activity;0.0395976740253463!GO:0045113;regulation of integrin biosynthetic process;0.0397398256470482!GO:0045112;integrin biosynthetic process;0.0397398256470482!GO:0043300;regulation of leukocyte degranulation;0.0399527103154311!GO:0006839;mitochondrial transport;0.0399760280564038!GO:0019220;regulation of phosphate metabolic process;0.0400976755506965!GO:0051174;regulation of phosphorus metabolic process;0.0400976755506965!GO:0016311;dephosphorylation;0.0405622950808849!GO:0006984;ER-nuclear signaling pathway;0.0406328757141659!GO:0045792;negative regulation of cell size;0.0407682990986018!GO:0005762;mitochondrial large ribosomal subunit;0.0414058034247952!GO:0000315;organellar large ribosomal subunit;0.0414058034247952!GO:0017091;AU-rich element binding;0.0414058034247952!GO:0050779;RNA destabilization;0.0414058034247952!GO:0000289;poly(A) tail shortening;0.0414058034247952!GO:0030133;transport vesicle;0.0419379258699959!GO:0048002;antigen processing and presentation of peptide antigen;0.0420081046525519!GO:0006689;ganglioside catabolic process;0.0420081046525519!GO:0005996;monosaccharide metabolic process;0.0424290617897206!GO:0022884;macromolecule transmembrane transporter activity;0.0427736073896433!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0427736073896433!GO:0045920;negative regulation of exocytosis;0.042964998245625!GO:0043301;negative regulation of leukocyte degranulation;0.042964998245625!GO:0043305;negative regulation of mast cell degranulation;0.042964998245625!GO:0051091;positive regulation of transcription factor activity;0.042964998245625!GO:0003746;translation elongation factor activity;0.0431495077662997!GO:0042147;retrograde transport, endosome to Golgi;0.0440375777305886!GO:0006007;glucose catabolic process;0.0441453283600339!GO:0009611;response to wounding;0.0443789837739108!GO:0006310;DNA recombination;0.0443789837739108!GO:0003988;acetyl-CoA C-acyltransferase activity;0.044756838939295!GO:0051235;maintenance of localization;0.0449821150620141!GO:0019883;antigen processing and presentation of endogenous antigen;0.0450691440121532!GO:0008286;insulin receptor signaling pathway;0.0454732385047804!GO:0005152;interleukin-1 receptor antagonist activity;0.0454907509697988!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0454907509697988!GO:0002520;immune system development;0.0460153832630229!GO:0002252;immune effector process;0.0460153832630229!GO:0006376;mRNA splice site selection;0.0460153832630229!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0460153832630229!GO:0000118;histone deacetylase complex;0.0464387919831379!GO:0006509;membrane protein ectodomain proteolysis;0.0470659451425871!GO:0033619;membrane protein proteolysis;0.0470659451425871!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0481723274933218!GO:0009299;mRNA transcription;0.0481927390996521!GO:0001775;cell activation;0.048432577564329!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0487480407759694!GO:0002821;positive regulation of adaptive immune response;0.0487480407759694!GO:0017166;vinculin binding;0.0497064388056175!GO:0019783;small conjugating protein-specific protease activity;0.0499261413998873!GO:0015923;mannosidase activity;0.0499261413998873!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0499261413998873!GO:0002250;adaptive immune response;0.0499261413998873!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0499261413998873
|sample_id=11887
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=
|top_motifs=NFE2L2:3.82019866324;NFE2:3.74113791703;FOSL2:3.50422236394;HLF:3.37906516087;SREBF1,2:3.25756794856;BACH2:3.25656492616;CEBPA,B_DDIT3:3.17087878663;FOS_FOS{B,L1}_JUN{B,D}:3.13707645572;PAX2:3.12230859861;SPIB:2.90784655347;NFIL3:2.85710924414;SPI1:2.83960211481;FOXP3:2.79840932743;NANOG{mouse}:2.75759595259;ATF5_CREB3:2.63225509634;HSF1,2:2.5600088392;ETS1,2:2.46240357164;ATF6:2.43395663735;NFKB1_REL_RELA:2.2834437866;EP300:2.16644368404;DMAP1_NCOR{1,2}_SMARC:2.10564855811;RUNX1..3:2.06842142352;JUN:1.93029134757;FOXN1:1.90841527339;ATF4:1.90623637938;CREB1:1.81414657832;NFE2L1:1.81072941939;ELF1,2,4:1.73771187009;MAFB:1.69519192899;IRF1,2:1.51868361337;CDX1,2,4:1.36445611916;HMGA1,2:1.32299124574;NR1H4:1.26427803259;IRF7:1.25075428494;RXRA_VDR{dimer}:1.22223647734;ATF2:1.19998930737;PPARG:1.16689792601;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15849404194;STAT2,4,6:1.12038151588;TGIF1:1.08782344233;NFATC1..3:1.05347960518;ALX1:0.854769035538;ESRRA:0.799014539265;PAX8:0.764851088884;SMAD1..7,9:0.632723206438;FOXO1,3,4:0.626620366061;GLI1..3:0.620222884305;NANOG:0.610070718176;XBP1:0.552508750943;HES1:0.536088466143;PAX3,7:0.533127564749;HMX1:0.521880915004;ALX4:0.511238507816;PDX1:0.478004871264;HIF1A:0.39690734906;STAT5{A,B}:0.392949725669;TLX2:0.372441525544;NR6A1:0.353037771838;RBPJ:0.33292022956;HOX{A5,B5}:0.332202369047;TBP:0.330949415908;EN1,2:0.186923153673;AHR_ARNT_ARNT2:0.167357450313;ESR1:0.148777168657;FOX{F1,F2,J1}:0.115967421936;PAX1,9:0.115259578105;FOX{D1,D2}:0.0764544822215;MEF2{A,B,C,D}:0.0467364361775;RFX2..5_RFXANK_RFXAP:0.0304231400338;SRF:0.0111299369917;TFCP2:-0.00731681078848;SPZ1:-0.0799009944575;MYB:-0.0921042613883;ZBTB16:-0.101022442834;HBP1_HMGB_SSRP1_UBTF:-0.133502098489;GATA4:-0.147146282259;OCT4_SOX2{dimer}:-0.160602281319;IKZF1:-0.163821550091;BPTF:-0.195942689009;VSX1,2:-0.239672863812;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.287729299036;STAT1,3:-0.318458694762;RORA:-0.320912957323;PAX6:-0.382946091496;PRRX1,2:-0.38722995738;PRDM1:-0.395434991892;FOXD3:-0.465839774207;NFIX:-0.484538297444;HOXA9_MEIS1:-0.494569231752;POU2F1..3:-0.512722497976;POU5F1:-0.514953015639;IKZF2:-0.521262562719;TAL1_TCF{3,4,12}:-0.532298924503;SOX2:-0.591988700582;HNF4A_NR2F1,2:-0.646915800081;NR3C1:-0.655666575698;RFX1:-0.656580052387;EGR1..3:-0.666886207918;ZNF148:-0.761926004984;MYFfamily:-0.762116554666;ZNF238:-0.770372513955;HNF1A:-0.807024749005;ELK1,4_GABP{A,B1}:-0.817705636003;MZF1:-0.822567387159;NHLH1,2:-0.824118141424;NKX3-1:-0.826878807773;PAX4:-0.922871318557;TEF:-0.976071395772;PITX1..3:-0.985002142925;TBX4,5:-0.999924950726;REST:-1.00583178911;NKX2-2,8:-1.00694061921;TFAP4:-1.02156753069;FOXL1:-1.03550942371;DBP:-1.0600240046;GATA6:-1.06807272214;FOXM1:-1.10861517268;SOX5:-1.11264350826;FOXA2:-1.11282850814;PATZ1:-1.12540493256;FOXP1:-1.12828491059;ZIC1..3:-1.188606572;T:-1.21559999932;HOX{A4,D4}:-1.22743130673;ZBTB6:-1.24248656504;CRX:-1.30233263429;RXR{A,B,G}:-1.34546724079;MYBL2:-1.37367137424;MED-1{core}:-1.38750487223;GZF1:-1.39806090085;NKX2-3_NKX2-5:-1.40239795363;ZNF384:-1.42287886132;TLX1..3_NFIC{dimer}:-1.42808910459;MTE{core}:-1.44160953833;MTF1:-1.44480674616;GTF2A1,2:-1.44895929634;TEAD1:-1.4492379385;ZFP161:-1.48218444799;MYOD1:-1.49495587122;E2F1..5:-1.49858780674;GCM1,2:-1.49970712019;SP1:-1.50275500672;HOX{A6,A7,B6,B7}:-1.51276578318;EVI1:-1.5319230949;SOX{8,9,10}:-1.53593736307;ZEB1:-1.53920956708;NKX2-1,4:-1.54385456933;GTF2I:-1.56955419283;NR5A1,2:-1.57245872538;MAZ:-1.59455344752;CUX2:-1.60120298735;NKX3-2:-1.62434981518;KLF4:-1.6465363904;EBF1:-1.64870938507;TP53:-1.6507496821;TFDP1:-1.65814548265;BREu{core}:-1.67060192778;ADNP_IRX_SIX_ZHX:-1.6926057769;AIRE:-1.7064467838;TFAP2B:-1.71202117175;FOX{I1,J2}:-1.71711781465;PAX5:-1.73472995847;NKX6-1,2:-1.75686337413;SNAI1..3:-1.80900162975;POU6F1:-1.81058986184;UFEwm:-1.85032062272;RREB1:-1.85042819572;ONECUT1,2:-1.85700449703;FOXQ1:-1.92335912185;TFAP2{A,C}:-1.93250964042;AR:-1.95946040441;YY1:-1.99975647012;ZNF423:-2.0293705201;HIC1:-2.09529622004;XCPE1{core}:-2.12268993454;PBX1:-2.13055950733;NFY{A,B,C}:-2.13916136326;ARID5B:-2.14880253789;GFI1B:-2.16299325048;POU1F1:-2.25835946259;LMO2:-2.2920419221;bHLH_family:-2.30739549645;NRF1:-2.30789634676;LHX3,4:-2.3248424587;SOX17:-2.37389418291;POU3F1..4:-2.38334745283;GFI1:-2.43419731244;CDC5L:-2.53589339178;HAND1,2:-2.68944829016;ZNF143:-2.75039617707;TOPORS:-2.78226599209;LEF1_TCF7_TCF7L1,2:-3.02492814083
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11887-125D6;search_select_hide=table117:FF:11887-125D6
}}
}}

Latest revision as of 18:26, 4 June 2020

Name:CD14+ monocytes - treated with Cryptococcus, donor3
Species:Human (Homo sapiens)
Library ID:CNhs13546
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexfemale
age21
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD5-8
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005991
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13546 CAGE DRX008146 DRR009018
Accession ID Hg19

Library idBAMCTSS
CNhs13546 DRZ000443 DRZ001828
Accession ID Hg38

Library idBAMCTSS
CNhs13546 DRZ011793 DRZ013178
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.41
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.152
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.371
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.466
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.088
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.132
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.722
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.088
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.447
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.371
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.395
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.406
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.129
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.806
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.088
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.327
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0442
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.224
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0427
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.224
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.887
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.161
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.836
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.68
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.462
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.849
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.447
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.161
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.672
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.292
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.948
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.365
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.717
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.642
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.327
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.863
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.279
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.224
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.606
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.0493
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.224
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.347
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.224
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.817
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.224
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.195
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.161
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.224
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.279
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13546

Jaspar motifP-value
MA0002.22.65716e-9
MA0003.10.367
MA0004.10.293
MA0006.10.986
MA0007.10.807
MA0009.10.715
MA0014.10.561
MA0017.10.0534
MA0018.20.0317
MA0019.10.988
MA0024.10.00179
MA0025.11.82378e-4
MA0027.10.818
MA0028.10.664
MA0029.10.276
MA0030.10.609
MA0031.10.775
MA0035.20.364
MA0038.10.377
MA0039.20.812
MA0040.10.219
MA0041.10.426
MA0042.10.572
MA0043.13.73339e-7
MA0046.10.0226
MA0047.20.914
MA0048.10.97
MA0050.11.38239e-4
MA0051.10.0643
MA0052.10.0335
MA0055.10.894
MA0057.10.578
MA0058.10.0899
MA0059.10.166
MA0060.11.12531e-8
MA0061.17.42852e-8
MA0062.20.0526
MA0065.20.00746
MA0066.10.0263
MA0067.11.12029e-5
MA0068.10.873
MA0069.10.761
MA0070.10.0245
MA0071.10.26
MA0072.10.606
MA0073.10.242
MA0074.10.198
MA0076.10.677
MA0077.10.108
MA0078.10.468
MA0079.20.265
MA0080.23.98268e-14
MA0081.11.93025e-4
MA0083.10.645
MA0084.10.775
MA0087.10.75
MA0088.10.846
MA0090.10.237
MA0091.10.672
MA0092.10.286
MA0093.10.289
MA0099.21.04062e-41
MA0100.10.853
MA0101.11.15574e-7
MA0102.23.36993e-8
MA0103.10.143
MA0104.20.449
MA0105.11.95931e-11
MA0106.10.816
MA0107.19.60169e-10
MA0108.20.335
MA0111.10.471
MA0112.23.64364e-5
MA0113.10.75
MA0114.10.138
MA0115.10.85
MA0116.12.48927e-4
MA0117.10.0682
MA0119.10.31
MA0122.10.658
MA0124.10.41
MA0125.10.275
MA0131.10.509
MA0135.10.935
MA0136.13.26574e-17
MA0137.20.135
MA0138.20.711
MA0139.10.997
MA0140.10.37
MA0141.10.0881
MA0142.10.451
MA0143.10.638
MA0144.10.0894
MA0145.10.33
MA0146.10.21
MA0147.10.558
MA0148.10.991
MA0149.10.149
MA0150.13.12296e-19
MA0152.10.983
MA0153.10.00326
MA0154.17.11656e-4
MA0155.10.745
MA0156.19.31238e-11
MA0157.10.687
MA0159.10.00624
MA0160.10.0283
MA0162.10.859
MA0163.11.15909e-7
MA0164.10.703
MA0258.10.0054
MA0259.10.759



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13546

Novel motifP-value
10.0877
100.021
1000.761
1010.971
1020.786
1030.229
1040.577
1050.185
1060.00216
1070.321
1080.762
1090.194
110.145
1100.201
1110.0638
1120.316
1130.554
1140.0196
1150.122
1160.85
1170.0577
1180.184
1190.148
120.304
1200.361
1210.472
1220.588
1230.44
1240.715
1250.428
1260.172
1270.362
1280.0445
1290.373
130.127
1300.378
1310.691
1320.0603
1330.964
1340.539
1350.305
1360.89
1370.00743
1380.347
1390.0474
140.583
1400.216
1410.309
1420.516
1430.0164
1440.622
1450.535
1460.606
1470.524
1480.0185
1490.837
150.14
1500.496
1510.425
1520.241
1530.504
1540.76
1550.706
1560.517
1570.562
1580.0562
1590.116
160.317
1600.523
1610.47
1620.226
1630.25
1640.151
1650.164
1660.584
1670.23
1680.15
1690.00779
170.242
180.123
190.342
20.744
200.318
210.614
220.231
230.0647
240.304
250.308
260.0504
270.856
280.388
290.272
30.143
300.523
310.79
320.618
330.282
340.579
350.137
360.0987
370.0634
380.365
390.789
40.817
400.202
410.0104
420.371
430.0321
440.934
450.7
460.164
470.477
480.464
490.126
50.236
500.913
510.412
520.373
530.453
540.356
550.63
560.712
570.928
580.125
590.178
60.619
600.0512
610.571
620.0532
630.566
640.437
650.233
660.41
670.395
680.553
690.633
70.22
700.0325
710.0218
720.257
730.148
740.0721
750.0884
760.204
770.483
780.131
790.764
80.4
800.101
810.34
820.141
830.0612
840.401
850.0221
860.058
870.294
880.628
890.166
90.366
900.085
910.362
920.208
930.173
940.0465
950.369
960.392
970.786
980.149
990.0743



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13546


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000634 (Cryptococcus treatment sample)
0011105 (human CD14-positive monocytes - treated with Cryptococcus sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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