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{{f5samples
{{f5samples
|id=FF:10809-111A8
|DRA_sample_Accession=CAGE@SAMD00006011
|name=Wilms' tumor cell line:G-401
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00006011
|sample_id=10809
|accession_numbers=CAGE;DRX007794;DRR008666;DRZ000091;DRZ001476;DRZ011441;DRZ012826
|rna_tube_id=111A8
|accession_numbers_RNASeq=RNA-Seq;DRX057144;DRR062903;DRZ007979
|rna_box=111
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002113,UBERON:0002100,UBERON:0000062,UBERON:0000475,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0005173,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0000916
|rna_position=A8
|sample_cell_lot=
|sample_cell_catalog=jcrb9065
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=kidney
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=3 months
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=2.07
|rna_od260/280=2.06
|sample_cell_type=unclassifiable
|sample_cell_line=G-401
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=Wilms' tumor
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=49.67244
|rna_concentration=1.83972
|sample_note=
|profile_hcage=CNhs11892,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000480,UBERON:0000489,UBERON:0000916,UBERON:0000922,UBERON:0001008,UBERON:0001062,UBERON:0002100,UBERON:0002113,UBERON:0002417,UBERON:0003103,UBERON:0005095,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005423,UBERON:0006554,UBERON:0007687
|ancestors_in_disease_facet=DOID:4,DOID:7
|ancestors_in_disease_facet=DOID:4,DOID:7
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100067,FF:0103192,FF:0102586
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:66218598..66218645,+!p2@HMGA2!2.19!670.21!HMGA2;;chr12:66218255..66218304,+!p3@HMGA2!1.94!224.54!HMGA2;;chr4:4861385..4861398,+!p1@MSX1!1.86!201.04!MSX1;;chr15:42749722..42749739,-!p2@ZFP106!1.86!123.81!ZFP106;;chr14:57277178..57277203,-!p1@OTX2!1.78!59.29!OTX2;;chr17:48072574..48072597,-!p1@DLX3!1.63!41.77!DLX3;;chr12:66218212..66218244,+!p5@HMGA2!1.62!58.75!HMGA2;;chr12:66357214..66357233,+!p13@HMGA2!1.61!39.63!HMGA2;;chr9:129376233..129376251,+!p2@LMX1B!1.60!38.99!LMX1B;;chr2:172967621..172967637,-!p1@DLX2!1.57!94.43!DLX2;;chr12:66218573..66218596,+!p7@HMGA2!1.51!46.04!HMGA2;;chr12:66218836..66218888,+!p1@HMGA2!1.49!269.20!HMGA2;;chr14:68282778..68282790,-!p2@ZFYVE26!1.42!25.53!ZFYVE26;;chr22:19748231..19748317,+!p1@TBX1!1.40!24.14!TBX1;;chr5:174151612..174151633,+!p2@MSX2!1.39!23.29!MSX2;;chr12:66218183..66218209,+!p4@HMGA2!1.38!44.01!HMGA2;;chr12:54379029..54379057,+!p2@HOXC10!1.38!22.75!HOXC10;;chr17:41739283..41739297,-!p1@MEOX1!1.37!22.33!MEOX1;;chr15:35280863..35280908,-!p3@ZNF770!1.36!25.00!ZNF770;;chr3:69788576..69788648,+!p1@MITF!1.35!111.74!MITF;;chr12:66218378..66218401,+!p6@HMGA2!1.34!32.26!HMGA2;;chr12:54785074..54785122,-!p2@ZNF385A!1.33!30.98!ZNF385A;;chr12:54785054..54785072,-!p4@ZNF385A!1.31!21.79!ZNF385A;;chr16:1031762..1031781,+!p1@SOX8!1.31!19.23!SOX8;;chr12:66218443..66218461,+!p8@HMGA2!1.30!24.25!HMGA2;;chr9:124991204..124991246,-!p1@LHX6!1.30!19.12!LHX6;;chr2:172949484..172949522,+!p1@DLX1!1.30!18.91!DLX1;;chr5:174151553..174151610,+!p1@MSX2!1.29!30.77!MSX2;;chr18:3411569..3411590,+!p43@TGIF1!1.27!17.63!TGIF1;;chr2:172950227..172950249,+!p2@DLX1!1.27!17.52!DLX1;;chr2:172967242..172967265,-!p2@DLX2!1.26!17.31!DLX2;;chr14:68282796..68282809,-!p3@ZFYVE26!1.22!15.49!ZFYVE26;;chr15:74833584..74833626,+!p1@ARID3B!1.21!35.15!ARID3B;;chr3:128206762..128206781,-!p2@GATA2!1.20!92.19!GATA2;;chr12:66218420..66218439,+!p12@HMGA2!1.19!14.42!HMGA2;;chr20:50418972..50419029,-!p1@SALL4!1.19!14.42!SALL4;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.18!13.99!HOXC5;;chr4:26322267..26322334,+!p3@RBPJ!1.17!33.12!RBPJ;;chr12:54332687..54332701,+!p3@HOXC13!1.17!13.89!HOXC13;;chr12:66358080..66358094,+!p15@HMGA2!1.15!13.25!HMGA2;;chr12:54393880..54393962,+!p1@HOXC9!1.15!13.14!HOXC9;;chr7:27205136..27205164,-!p1@HOXA9!1.15!13.03!HOXA9;;chr6:19837592..19837621,+!p1@ID4!1.14!77.55!ID4;;chr11:44331576..44331650,-!p1@ALX4!1.14!12.71!ALX4;;chr7:26191809..26191890,+!p1@NFE2L3!1.13!62.06!NFE2L3;;chr15:37390850..37390909,-!p3@MEIS2!1.13!24.46!MEIS2;;chr11:63684602..63684664,-!p1@RCOR2!1.12!24.46!RCOR2;;chr12:54332652..54332671,+!p2@HOXC13!1.12!12.18!HOXC13;;chr20:50418947..50418964,-!p4@SALL4!1.11!11.96!SALL4;;chr9:129376201..129376225,+!p1@LMX1B!1.10!11.64!LMX1B;;chrY:21906594..21906622,-!p1@KDM5D!1.10!11.54!KDM5D;;chr12:66218469..66218477,+!p16@HMGA2!1.10!11.54!HMGA2;;chr5:134369905..134369972,-!p1@PITX1!1.09!17.31!PITX1;;chr5:92919375..92919438,+!p6@NR2F1!1.09!12.39!NR2F1;;chr13:100634031..100634045,+!p1@ZIC2!1.09!11.32!ZIC2;;chr2:172967276..172967296,-!p3@DLX2!1.09!11.22!DLX2;;chr9:4300050..4300118,-!p1@GLIS3!1.08!72.85!GLIS3;;chr14:57277098..57277116,-!p3@OTX2!1.08!11.11!OTX2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.08!11.00!PEG3;;chr5:92919100..92919135,+!p3@NR2F1!1.05!12.39!NR2F1;;chr20:50418906..50418924,-!p6@SALL4!1.05!10.26!SALL4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.05!10.15!SEBOX;;chr3:69812798..69812824,+!p8@MITF!1.05!10.15!MITF;;chr20:50721803..50721857,-!p2@ZFP64!1.04!15.81!ZFP64;;chr2:237077022..237077038,-!p1@GBX2!1.03!9.83!GBX2;;chr13:100623375..100623425,-!p1@ZIC5!1.01!9.29!ZIC5;;chr17:8027418..8027432,-!p1@HES7!1.01!9.29!HES7;;chr20:50418128..50418147,-!p2@SALL4!1.01!9.19!SALL4;;chr12:54694758..54694805,-!p1@NFE2!1.00!10.90!NFE2;;chr17:7493405..7493419,-!p1@SOX15!1.00!9.08!SOX15;;chr9:126774018..126774055,+!p1@LHX2!1.00!9.08!LHX2;;chr14:57272369..57272391,-!p2@OTX2!0.98!8.65!OTX2;;chr12:54332608..54332636,+!p1@HOXC13!0.96!8.12!HOXC13;;chr5:92922831..92922864,+!p14@NR2F1!0.95!8.01!NR2F1;;chr14:68283125..68283137,-!p5@ZFYVE26!0.95!7.90!ZFYVE26;;chr2:172967323..172967336,-!p4@DLX2!0.95!7.90!DLX2;;chr17:46806035..46806059,-!p2@HOXB13!0.95!7.90!HOXB13;;chr1:23885981..23886002,-!p1@ID3!0.94!1399.61!ID3;;chr15:35280823..35280852,-!p6@ZNF770!0.94!7.69!ZNF770;;chr2:172967353..172967365,-!p5@DLX2!0.94!7.69!DLX2;;chr5:92918919..92918942,+!p1@NR2F1!0.93!34.93!NR2F1;;chr18:22932080..22932170,-!p1@ZNF521!0.93!32.79!ZNF521;;chr15:37390374..37390422,-!p9@MEIS2!0.93!9.29!MEIS2;;chr3:128207349..128207386,-!p3@GATA2!0.93!7.58!GATA2;;chr4:26322673..26322684,+!p11@RBPJ!0.93!7.48!RBPJ;;chr5:92920456..92920488,+!p9@NR2F1!0.92!8.55!NR2F1;;chr4:26323870..26323885,+!p13@RBPJ!0.92!7.37!RBPJ;;chr17:48046642..48046667,+!p3@DLX4!0.92!7.26!DLX4;;chr16:86600426..86600441,+!p1@FOXC2!0.91!18.05!FOXC2;;chr4:26323764..26323821,+!p15@RBPJ!0.91!7.05!RBPJ;;chr5:134369879..134369898,-!p2@PITX1!0.91!7.05!PITX1;;chr7:27205106..27205134,-!p2@HOXA9!0.90!6.94!HOXA9;;chr17:46806067.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3579,-!p2@WIZ!0.19!5.45!WIZ;;chr9:129622904..129622956,+!p1@ZBTB34!0.19!4.17!ZBTB34;;chr4:1873011..1873063,+!p2@WHSC1!0.19!3.95!WHSC1;;chr19:23870007..23870022,-!p2@ZNF675!0.19!3.74!ZNF675;;chr22:42229210..42229229,+!p3@SREBF2!0.19!2.46!SREBF2;;chr11:47279504..47279563,+!p1@NR1H3!0.19!2.35!NR1H3;;chr8:182368..182402,+!p2@ZNF596!0.19!1.71!ZNF596;;chr1:114302066..114302080,-!p2@PHTF1!0.19!1.71!PHTF1;;chr6:157099159..157099185,+!p6@ARID1B!0.19!1.60!ARID1B;;chr12:3068501..3068515,+!p4@TEAD4!0.19!1.60!TEAD4;;chr14:61191049..61191080,-!p2@SIX4!0.19!1.60!SIX4;;chr18:47814010..47814021,-!p3@CXXC1!0.19!1.50!CXXC1;;chr6:144329531..144329546,-!p5@PLAGL1!0.19!1.39!PLAGL1;;chr8:67525443..67525459,-!p2@MYBL1!0.19!1.28!MYBL1;;chr18:77867177..77867197,+!p3@ADNP2!0.19!1.28!ADNP2;;chr15:56535722..56535764,-!p3@RFX7!0.19!1.18!RFX7;;chr11:65687243..65687276,+!p8@DRAP1!0.19!1.07!DRAP1;;chr12:80083722..80083766,-!p12@PAWR!0.19!1.07!PAWR;;chr2:148778934..148778965,+!p6@MBD5!0.19!0.85!MBD5;;chr19:9785710..9785721,-!p3@ZNF562!0.19!0.85!ZNF562;;chr1:6845598..6845601,+!p5@CAMTA1!0.19!0.85!CAMTA1;;chr3:185826286..185826318,-!p5@ETV5!0.19!0.75!ETV5;;chr17:41623667..41623682,-!p8@ETV4!0.19!0.64!ETV4;;chr15:61521495..61521506,-!p5@RORA!0.19!0.53!RORA;;chr17:46621146..46621180,-!p10@HOXB2!0.19!0.53!HOXB2;;chr19:45579699..45579704,-!p3@ZNF296!0.19!0.53!ZNF296;;chr19:50529307..50529323,+!p3@ZNF473!0.19!0.53!ZNF473;;chr19:57791947..57791956,+!p7@ZNF460!0.19!0.53!ZNF460;;chr19:58545369..58545404,+!p2@ZSCAN1!0.19!0.53!ZSCAN1;;chr1:2234717..2234744,+!p4@SKI!0.19!0.53!SKI;;chr1:244214577..244214593,+!p1@ZNF238!0.19!0.53!ZNF238;;chr1:78415117..78415121,-!p17@FUBP1!0.19!0.53!FUBP1;;chr20:50179334..50179343,-!p3@NFATC2!0.19!0.53!NFATC2;;chr20:50419055..50419066,-!p3@SALL4!0.19!0.53!SALL4;;chr20:52226313..52226350,-!p3@ZNF217!0.19!0.53!ZNF217;;chr5:124081979..124082021,-!p7@ZNF608!0.19!0.53!ZNF608;;chr5:124084466..124084484,-!p6@ZNF608!0.19!0.53!ZNF608;;chr5:180288373..180288380,-!p5@ZFP62!0.19!0.53!ZFP62;;chr5:92920517..92920532,+!p15@NR2F1!0.19!0.53!NR2F1;;chr6:19838300..19838315,+!p4@ID4!0.19!0.53!ID4;;chr7:149470297..149470337,-!p3@ZNF467!0.19!0.53!ZNF467;;chr7:150102756..150102772,+!p5@ZNF775!0.19!0.53!ZNF775;;chr7:150945740..150945750,-!p7@SMARCD3!0.19!0.53!SMARCD3;;chr7:150945865..150945896,-!p4@SMARCD3!0.19!0.53!SMARCD3;;chr7:27135568..27135590,-!p2@HOXA1!0.19!0.53!HOXA1;;chr7:27153428..27153440,-!p3@HOXA3!0.19!0.53!HOXA3;;chr7:27213872..27213886,-!p4@HOXA10!0.19!0.53!HOXA10;;chr7:27224911..27224922,-!p5@HOXA11!0.19!0.53!HOXA11;;chr8:102216978..102217003,-!p4@ZNF706!0.19!0.53!ZNF706;;chr8:30890810..30890880,-!p1@PURG!0.19!0.53!PURG;;chr9:115819058..115819082,-!p2@ZFP37!0.19!0.53!ZFP37;;chr10:102505312..102505320,+!p6@PAX2!0.19!0.53!PAX2;;chr10:69991865..69991870,-!p1@ATOH7!0.19!0.53!ATOH7;;chr11:31832658..31832681,-!p1@PAX6!0.19!0.53!PAX6;;chr12:54366780..54366791,+!p12@HOXC11!0.19!0.53!HOXC11;;chr12:54379011..54379016,+!p15@HOXC10!0.19!0.53!HOXC10;;chr12:54380112..54380126,+!p5@HOXC10!0.19!0.53!HOXC10;;chr12:54447686..54447704,+!p5@HOXC4!0.19!0.53!HOXC4;;chr12:56414795..56414836,+!p4@IKZF4!0.19!0.53!IKZF4;;chr12:57853596..57853613,+!p3@GLI1!0.19!0.53!GLI1;;chr12:66217414..66217419,+!p25@HMGA2!0.19!0.53!HMGA2;;chr12:80084120..80084136,-!p15@PAWR!0.19!0.53!PAWR;;chr12:85673977..85674015,+!p1@ALX1!0.19!0.53!ALX1;;chr14:21562671..21562702,-!p8@ZNF219!0.19!0.53!ZNF219;;chr14:21994525..21994547,-!p4@SALL2!0.19!0.53!SALL2;;chr14:57277357..57277384,-!p5@OTX2!0.19!0.53!OTX2;;chr22:19747040..19747054,+!p3@TBX1!0.19!0.53!TBX1;;
|ffid_belonging_in_development=UBERON:0003104,UBERON:0003918,UBERON:0007687
|fonse_cell_line=FF:0100067
|fonse_cell_line=FF:0100067
|fonse_cell_line_closure=FF:0100067
|fonse_cell_line_closure=FF:0100067
Line 66: Line 42:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
|def=
|has_quality=
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|rna_box=111
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|rna_od260/230=2.07
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|sample_age=3 months
|sample_category=cell lines
|sample_cell_catalog=jcrb9065
|sample_cell_line=G-401
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|sample_cell_type=unclassifiable
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
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|sample_disease=Wilms' tumor
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|sample_ethnicity=C
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.45047095673243e-279!GO:0043226;organelle;3.84068357695748e-237!GO:0043229;intracellular organelle;2.01364653487583e-236!GO:0043227;membrane-bound organelle;1.86905509340853e-232!GO:0043231;intracellular membrane-bound organelle;2.34302360498533e-232!GO:0005737;cytoplasm;1.96969856753585e-180!GO:0044422;organelle part;4.04939401508119e-168!GO:0044446;intracellular organelle part;2.64141150705678e-166!GO:0044444;cytoplasmic part;2.14122077271932e-128!GO:0032991;macromolecular complex;1.33134048583043e-118!GO:0005634;nucleus;4.66750579981588e-111!GO:0030529;ribonucleoprotein complex;6.33438785361973e-102!GO:0044237;cellular metabolic process;2.60583690457931e-97!GO:0044238;primary metabolic process;5.33282133923222e-97!GO:0043170;macromolecule metabolic process;8.81001931210408e-93!GO:0044428;nuclear part;1.0460341155473e-89!GO:0003723;RNA binding;2.77405587784356e-89!GO:0043233;organelle lumen;2.34228127196566e-84!GO:0031974;membrane-enclosed lumen;2.34228127196566e-84!GO:0005739;mitochondrion;1.0187807741712e-78!GO:0005515;protein binding;7.4381264707759e-65!GO:0006396;RNA processing;2.6381525982291e-63!GO:0043234;protein complex;1.07574132453062e-59!GO:0043283;biopolymer metabolic process;1.30301962413559e-57!GO:0005840;ribosome;1.57464135084124e-57!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.69588541908141e-55!GO:0016043;cellular component organization and biogenesis;8.07062647619734e-54!GO:0044429;mitochondrial part;8.93956972702206e-53!GO:0010467;gene expression;2.11664998697717e-51!GO:0006412;translation;5.61945924482513e-51!GO:0031981;nuclear lumen;8.58058927844899e-51!GO:0003735;structural constituent of ribosome;8.71057382683224e-50!GO:0016071;mRNA metabolic process;3.36342218277524e-48!GO:0031967;organelle envelope;2.57880226574678e-46!GO:0031975;envelope;4.65391841950187e-46!GO:0031090;organelle membrane;4.96776703682651e-46!GO:0043228;non-membrane-bound organelle;6.17977451869947e-46!GO:0043232;intracellular non-membrane-bound organelle;6.17977451869947e-46!GO:0006259;DNA metabolic process;1.77942382578048e-45!GO:0033279;ribosomal subunit;7.51275925667881e-45!GO:0008380;RNA splicing;6.38969010161412e-44!GO:0006996;organelle organization and biogenesis;1.7860105469648e-43!GO:0019538;protein metabolic process;1.10488758903571e-42!GO:0033036;macromolecule localization;1.28412785729241e-42!GO:0015031;protein transport;3.30330472343352e-42!GO:0006397;mRNA processing;5.58191640532514e-42!GO:0044249;cellular biosynthetic process;4.14551531436844e-39!GO:0065003;macromolecular complex assembly;8.20934685678239e-39!GO:0046907;intracellular transport;9.18218750458583e-39!GO:0008104;protein localization;1.71356661292007e-38!GO:0045184;establishment of protein localization;9.40458185683219e-38!GO:0044260;cellular macromolecule metabolic process;1.71068268907908e-37!GO:0003676;nucleic acid binding;3.01400693804437e-37!GO:0005829;cytosol;3.02320925624334e-37!GO:0044267;cellular protein metabolic process;4.35972413694751e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.35972413694751e-37!GO:0009058;biosynthetic process;2.05114173895802e-36!GO:0007049;cell cycle;2.58290277626278e-35!GO:0009059;macromolecule biosynthetic process;4.92936000757217e-34!GO:0022607;cellular component assembly;5.03983289015996e-34!GO:0005740;mitochondrial envelope;4.41494048220942e-32!GO:0019866;organelle inner membrane;4.58224131776444e-32!GO:0005681;spliceosome;9.03562034723676e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.2517215716184e-31!GO:0006886;intracellular protein transport;1.00010089428219e-30!GO:0005654;nucleoplasm;4.77537408312516e-30!GO:0031966;mitochondrial membrane;1.09685793919342e-29!GO:0005743;mitochondrial inner membrane;2.80786764829443e-29!GO:0000166;nucleotide binding;3.01138967302295e-28!GO:0006974;response to DNA damage stimulus;1.44929353289966e-27!GO:0022402;cell cycle process;8.14865860317175e-27!GO:0044445;cytosolic part;8.59333936740806e-27!GO:0051649;establishment of cellular localization;2.08921207919568e-26!GO:0000278;mitotic cell cycle;2.44375121331075e-26!GO:0016070;RNA metabolic process;7.51407797422274e-26!GO:0051641;cellular localization;1.66299742771402e-25!GO:0005694;chromosome;2.5704103522731e-25!GO:0006119;oxidative phosphorylation;1.88649756358697e-24!GO:0006281;DNA repair;3.61375172119189e-24!GO:0044451;nucleoplasm part;4.03157955172484e-24!GO:0031980;mitochondrial lumen;5.19916110035071e-24!GO:0005759;mitochondrial matrix;5.19916110035071e-24!GO:0015935;small ribosomal subunit;1.28146055558575e-23!GO:0044427;chromosomal part;2.93219366751199e-23!GO:0000087;M phase of mitotic cell cycle;5.61231574200638e-23!GO:0007067;mitosis;1.28947661288628e-22!GO:0016462;pyrophosphatase activity;1.46709778448724e-22!GO:0017111;nucleoside-triphosphatase activity;1.67535173554888e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.72551353991634e-22!GO:0015934;large ribosomal subunit;2.01105802037103e-22!GO:0044455;mitochondrial membrane part;2.63111327817859e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.63111327817859e-22!GO:0051301;cell division;5.93800788144559e-22!GO:0005730;nucleolus;1.33249201624029e-21!GO:0022403;cell cycle phase;1.99209302850814e-21!GO:0051276;chromosome organization and biogenesis;4.46255473909428e-21!GO:0022618;protein-RNA complex assembly;1.78738557644022e-20!GO:0006457;protein folding;1.99852749204005e-20!GO:0006512;ubiquitin cycle;4.72279736828755e-20!GO:0006260;DNA replication;3.72321333770292e-19!GO:0000279;M phase;3.72750705239442e-19!GO:0044265;cellular macromolecule catabolic process;1.78213217989289e-18!GO:0016874;ligase activity;1.82988639359208e-18!GO:0043285;biopolymer catabolic process;3.58253536551156e-18!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.08503205721414e-18!GO:0032553;ribonucleotide binding;4.50369971503845e-18!GO:0032555;purine ribonucleotide binding;4.50369971503845e-18!GO:0005746;mitochondrial respiratory chain;8.17811235579411e-18!GO:0017076;purine nucleotide binding;8.30002102573272e-18!GO:0009719;response to endogenous stimulus;1.33098883670583e-17!GO:0005761;mitochondrial ribosome;1.91062718865267e-17!GO:0000313;organellar ribosome;1.91062718865267e-17!GO:0042254;ribosome biogenesis and assembly;3.55855438667795e-17!GO:0050136;NADH dehydrogenase (quinone) activity;4.83563561383806e-17!GO:0003954;NADH dehydrogenase activity;4.83563561383806e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.83563561383806e-17!GO:0009057;macromolecule catabolic process;6.00517826128494e-17!GO:0008135;translation factor activity, nucleic acid binding;6.99542045287415e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;7.96723721314639e-17!GO:0031965;nuclear membrane;1.23593759043881e-16!GO:0019941;modification-dependent protein catabolic process;1.41959632386526e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.41959632386526e-16!GO:0048770;pigment granule;1.56296891189794e-16!GO:0042470;melanosome;1.56296891189794e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.59527880844668e-16!GO:0044257;cellular protein catabolic process;1.84343105591753e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;2.23245692582412e-16!GO:0006511;ubiquitin-dependent protein catabolic process;2.51954875799627e-16!GO:0006605;protein targeting;2.93445895381933e-16!GO:0005524;ATP binding;3.20032587345952e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;3.20032587345952e-16!GO:0000375;RNA splicing, via transesterification reactions;3.20032587345952e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.20032587345952e-16!GO:0012505;endomembrane system;4.19278804936797e-16!GO:0044248;cellular catabolic process;5.09079932224158e-16!GO:0044453;nuclear membrane part;5.67654086392691e-16!GO:0016887;ATPase activity;6.55033775782499e-16!GO:0032559;adenyl ribonucleotide binding;7.02714403387126e-16!GO:0006323;DNA packaging;9.14006874560652e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.33608583512988e-15!GO:0030554;adenyl nucleotide binding;2.03369290437327e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.47247053044248e-15!GO:0042775;organelle ATP synthesis coupled electron transport;2.52928424049015e-15!GO:0042773;ATP synthesis coupled electron transport;2.52928424049015e-15!GO:0005635;nuclear envelope;4.15044045263368e-15!GO:0030964;NADH dehydrogenase complex (quinone);4.29894916187641e-15!GO:0045271;respiratory chain complex I;4.29894916187641e-15!GO:0005747;mitochondrial respiratory chain complex I;4.29894916187641e-15!GO:0030163;protein catabolic process;5.34944487162128e-15!GO:0042623;ATPase activity, coupled;6.71027661856361e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.32293243523252e-14!GO:0005643;nuclear pore;2.00055980092511e-14!GO:0051082;unfolded protein binding;2.31671563837333e-14!GO:0008134;transcription factor binding;3.36419368118923e-14!GO:0051186;cofactor metabolic process;7.12875180967659e-14!GO:0004386;helicase activity;9.75216723042018e-14!GO:0015630;microtubule cytoskeleton;1.55435442082638e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.68917551073892e-13!GO:0065002;intracellular protein transport across a membrane;3.16879418603669e-13!GO:0050657;nucleic acid transport;4.95111543309714e-13!GO:0051236;establishment of RNA localization;4.95111543309714e-13!GO:0050658;RNA transport;4.95111543309714e-13!GO:0006399;tRNA metabolic process;5.96831836679267e-13!GO:0006403;RNA localization;6.38162046228762e-13!GO:0005783;endoplasmic reticulum;6.39426193567349e-13!GO:0051726;regulation of cell cycle;7.5248793875041e-13!GO:0048193;Golgi vesicle transport;9.28026557745852e-13!GO:0006333;chromatin assembly or disassembly;9.41535080942142e-13!GO:0003743;translation initiation factor activity;1.02257865410198e-12!GO:0016604;nuclear body;1.03954777183944e-12!GO:0006413;translational initiation;1.09704310244063e-12!GO:0000785;chromatin;1.31314787452582e-12!GO:0000074;regulation of progression through cell cycle;1.55787764699467e-12!GO:0065004;protein-DNA complex assembly;1.8747757973929e-12!GO:0008026;ATP-dependent helicase activity;4.10097132595293e-12!GO:0046930;pore complex;5.88628419031055e-12!GO:0006364;rRNA processing;7.90211285636631e-12!GO:0044432;endoplasmic reticulum part;8.72774765286578e-12!GO:0043412;biopolymer modification;1.29552118092033e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.87294387171e-11!GO:0016072;rRNA metabolic process;2.07425494485543e-11!GO:0006732;coenzyme metabolic process;3.45952219515623e-11!GO:0008565;protein transporter activity;4.01727337815981e-11!GO:0006913;nucleocytoplasmic transport;4.95364056323412e-11!GO:0006446;regulation of translational initiation;5.09690563891531e-11!GO:0051028;mRNA transport;5.77982112041286e-11!GO:0051169;nuclear transport;1.44873778867342e-10!GO:0006461;protein complex assembly;1.78295927760282e-10!GO:0016607;nuclear speck;2.06144062258259e-10!GO:0030532;small nuclear ribonucleoprotein complex;2.3962731998418e-10!GO:0009055;electron carrier activity;2.55747957752526e-10!GO:0009259;ribonucleotide metabolic process;3.22302484066597e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.7489709959576e-10!GO:0005819;spindle;5.09661095928912e-10!GO:0006163;purine nucleotide metabolic process;6.43282911623719e-10!GO:0016192;vesicle-mediated transport;7.1720005571988e-10!GO:0009056;catabolic process;7.26077981262612e-10!GO:0016568;chromatin modification;7.86065512848909e-10!GO:0043687;post-translational protein modification;8.84247855637406e-10!GO:0005794;Golgi apparatus;1.03673318763228e-09!GO:0006464;protein modification process;1.26163270282983e-09!GO:0017038;protein import;1.36361676110348e-09!GO:0006334;nucleosome assembly;1.39094824998734e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.49660954519481e-09!GO:0003697;single-stranded DNA binding;1.76641665197024e-09!GO:0031497;chromatin assembly;2.35420816009593e-09!GO:0008639;small protein conjugating enzyme activity;2.76557993605357e-09!GO:0043566;structure-specific DNA binding;2.86811377353197e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.88623499444146e-09!GO:0006164;purine nucleotide biosynthetic process;2.9122989284053e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.08356117557531e-09!GO:0004812;aminoacyl-tRNA ligase activity;3.08356117557531e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.08356117557531e-09!GO:0000775;chromosome, pericentric region;3.2285843983023e-09!GO:0009260;ribonucleotide biosynthetic process;4.18598235750513e-09!GO:0009060;aerobic respiration;4.70967825814011e-09!GO:0004842;ubiquitin-protein ligase activity;5.14294762330716e-09!GO:0009150;purine ribonucleotide metabolic process;5.30163439682858e-09!GO:0003712;transcription cofactor activity;5.37031691264477e-09!GO:0006261;DNA-dependent DNA replication;5.5225860843496e-09!GO:0019787;small conjugating protein ligase activity;5.92687945135225e-09!GO:0043038;amino acid activation;9.49356820573857e-09!GO:0006418;tRNA aminoacylation for protein translation;9.49356820573857e-09!GO:0043039;tRNA aminoacylation;9.49356820573857e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.41955659618983e-08!GO:0015986;ATP synthesis coupled proton transport;1.53239513389123e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.53239513389123e-08!GO:0045333;cellular respiration;1.81809038648109e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.03535438474082e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.27713004559386e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.46732739518146e-08!GO:0005813;centrosome;2.63268867642447e-08!GO:0016779;nucleotidyltransferase activity;2.75997553847452e-08!GO:0005789;endoplasmic reticulum membrane;2.77077061768888e-08!GO:0005815;microtubule organizing center;2.89913704409474e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.5091989999687e-08!GO:0009141;nucleoside triphosphate metabolic process;4.49464247254039e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.38567706736581e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.38567706736581e-08!GO:0051188;cofactor biosynthetic process;5.58548516982928e-08!GO:0016881;acid-amino acid ligase activity;7.8911124335513e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.93311861191678e-08!GO:0009144;purine nucleoside triphosphate metabolic process;7.93311861191678e-08!GO:0006099;tricarboxylic acid cycle;1.23729302682094e-07!GO:0046356;acetyl-CoA catabolic process;1.23729302682094e-07!GO:0019829;cation-transporting ATPase activity;1.26514954366824e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.26634387044626e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.26634387044626e-07!GO:0046034;ATP metabolic process;1.40180623354028e-07!GO:0006754;ATP biosynthetic process;1.54346253925055e-07!GO:0006753;nucleoside phosphate metabolic process;1.54346253925055e-07!GO:0007051;spindle organization and biogenesis;1.95182124005811e-07!GO:0043623;cellular protein complex assembly;2.14709694021183e-07!GO:0000245;spliceosome assembly;2.56491010650755e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.56741258416133e-07!GO:0006084;acetyl-CoA metabolic process;2.64004179309242e-07!GO:0006366;transcription from RNA polymerase II promoter;3.02750982718318e-07!GO:0005667;transcription factor complex;3.18704336129803e-07!GO:0009117;nucleotide metabolic process;3.71688338751717e-07!GO:0007005;mitochondrion organization and biogenesis;3.79768892226688e-07!GO:0012501;programmed cell death;4.62310108292911e-07!GO:0003899;DNA-directed RNA polymerase activity;5.20847338536553e-07!GO:0032446;protein modification by small protein conjugation;6.31614371002262e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.73802827909361e-07!GO:0045259;proton-transporting ATP synthase complex;7.24446471754774e-07!GO:0051329;interphase of mitotic cell cycle;7.5992337526266e-07!GO:0015078;hydrogen ion transmembrane transporter activity;8.87168407085366e-07!GO:0008094;DNA-dependent ATPase activity;9.42345290681054e-07!GO:0006915;apoptosis;1.01009792342018e-06!GO:0050794;regulation of cellular process;1.02337590758134e-06!GO:0005793;ER-Golgi intermediate compartment;1.03693683779553e-06!GO:0005768;endosome;1.07790499637381e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.16215499310574e-06!GO:0009108;coenzyme biosynthetic process;1.17165436611961e-06!GO:0005657;replication fork;1.25294439795127e-06!GO:0016567;protein ubiquitination;1.34617224718569e-06!GO:0051187;cofactor catabolic process;1.78250662296905e-06!GO:0009109;coenzyme catabolic process;1.9520289005902e-06!GO:0000075;cell cycle checkpoint;2.00733338754868e-06!GO:0016740;transferase activity;2.10560256874063e-06!GO:0005762;mitochondrial large ribosomal subunit;2.22680040152164e-06!GO:0000315;organellar large ribosomal subunit;2.22680040152164e-06!GO:0006606;protein import into nucleus;2.49857759224903e-06!GO:0006752;group transfer coenzyme metabolic process;2.57837831880697e-06!GO:0051170;nuclear import;2.89478508639592e-06!GO:0008219;cell death;2.90119312218264e-06!GO:0016265;death;2.90119312218264e-06!GO:0000151;ubiquitin ligase complex;2.90119312218264e-06!GO:0051427;hormone receptor binding;4.56886417713653e-06!GO:0048475;coated membrane;4.85715306834784e-06!GO:0030117;membrane coat;4.85715306834784e-06!GO:0003724;RNA helicase activity;5.38560470510079e-06!GO:0051325;interphase;5.49112354436219e-06!GO:0003682;chromatin binding;5.90980470486615e-06!GO:0003684;damaged DNA binding;8.6250901565093e-06!GO:0000314;organellar small ribosomal subunit;8.80004225954953e-06!GO:0005763;mitochondrial small ribosomal subunit;8.80004225954953e-06!GO:0030120;vesicle coat;9.82664405265936e-06!GO:0030662;coated vesicle membrane;9.82664405265936e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.00723081275269e-05!GO:0035257;nuclear hormone receptor binding;1.02735453880571e-05!GO:0006302;double-strand break repair;1.31752737020974e-05!GO:0000786;nucleosome;1.47131677344784e-05!GO:0019222;regulation of metabolic process;1.47131677344784e-05!GO:0048523;negative regulation of cellular process;1.58110124734419e-05!GO:0006613;cotranslational protein targeting to membrane;1.71744436000865e-05!GO:0015980;energy derivation by oxidation of organic compounds;1.83415188987461e-05!GO:0005770;late endosome;2.13770914340977e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.32046754393873e-05!GO:0005874;microtubule;2.48379526134298e-05!GO:0045786;negative regulation of progression through cell cycle;2.56803699171595e-05!GO:0008654;phospholipid biosynthetic process;2.78554880326134e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.89912782345122e-05!GO:0008033;tRNA processing;3.13004438882633e-05!GO:0051246;regulation of protein metabolic process;3.13629436895684e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;3.36023158300395e-05!GO:0003713;transcription coactivator activity;3.47535618934208e-05!GO:0044452;nucleolar part;3.61141264850475e-05!GO:0005788;endoplasmic reticulum lumen;3.6211864772473e-05!GO:0000776;kinetochore;4.0943901856497e-05!GO:0016853;isomerase activity;4.10016984682373e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;4.19591089791893e-05!GO:0031324;negative regulation of cellular metabolic process;4.89742295507479e-05!GO:0007088;regulation of mitosis;5.25437240356974e-05!GO:0019843;rRNA binding;5.26604223394105e-05!GO:0000059;protein import into nucleus, docking;5.47934973336564e-05!GO:0016363;nuclear matrix;5.6873693609626e-05!GO:0007010;cytoskeleton organization and biogenesis;5.87452621364878e-05!GO:0051168;nuclear export;6.66243625346691e-05!GO:0006839;mitochondrial transport;6.8306825891146e-05!GO:0016787;hydrolase activity;6.84404680136729e-05!GO:0006793;phosphorus metabolic process;7.50147564120484e-05!GO:0006796;phosphate metabolic process;7.50147564120484e-05!GO:0016563;transcription activator activity;7.5023003981169e-05!GO:0016564;transcription repressor activity;7.8512651412398e-05!GO:0016310;phosphorylation;8.0214466436735e-05!GO:0003924;GTPase activity;8.09464470652983e-05!GO:0050789;regulation of biological process;8.86732366652639e-05!GO:0048519;negative regulation of biological process;9.27682457087543e-05!GO:0006414;translational elongation;9.31031032779721e-05!GO:0006091;generation of precursor metabolites and energy;9.41858077349472e-05!GO:0043069;negative regulation of programmed cell death;9.7344596896098e-05!GO:0005798;Golgi-associated vesicle;9.86793839886961e-05!GO:0009165;nucleotide biosynthetic process;0.000104342734316438!GO:0043021;ribonucleoprotein binding;0.000109254309484974!GO:0044440;endosomal part;0.00011009024759434!GO:0010008;endosome membrane;0.00011009024759434!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000118944559233308!GO:0019899;enzyme binding;0.000118965893575915!GO:0004298;threonine endopeptidase activity;0.000119866442637458!GO:0003729;mRNA binding;0.000130646259813253!GO:0006626;protein targeting to mitochondrion;0.000135392696205937!GO:0016859;cis-trans isomerase activity;0.000138466047826446!GO:0016491;oxidoreductase activity;0.000152651370226668!GO:0006383;transcription from RNA polymerase III promoter;0.00016225901791319!GO:0007093;mitotic cell cycle checkpoint;0.000172145866973778!GO:0009892;negative regulation of metabolic process;0.000177368640913554!GO:0005525;GTP binding;0.000182346818496648!GO:0003714;transcription corepressor activity;0.000186649993709066!GO:0008186;RNA-dependent ATPase activity;0.000186818292801022!GO:0007017;microtubule-based process;0.000188703033602416!GO:0006310;DNA recombination;0.000193616937018465!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00019875972318328!GO:0006352;transcription initiation;0.000216120876095842!GO:0003690;double-stranded DNA binding;0.000216392910021821!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000216392910021821!GO:0043066;negative regulation of apoptosis;0.000219241561057221!GO:0043681;protein import into mitochondrion;0.000232567419946458!GO:0007059;chromosome segregation;0.000234276443475119!GO:0043067;regulation of programmed cell death;0.00025621952535098!GO:0006916;anti-apoptosis;0.000277570601104253!GO:0031988;membrane-bound vesicle;0.0003138365203515!GO:0005769;early endosome;0.0003138365203515!GO:0045454;cell redox homeostasis;0.000324216955115419!GO:0007006;mitochondrial membrane organization and biogenesis;0.000324774227982924!GO:0042981;regulation of apoptosis;0.000368044396115987!GO:0003678;DNA helicase activity;0.000378363473682817!GO:0051052;regulation of DNA metabolic process;0.000396038426907978!GO:0005684;U2-dependent spliceosome;0.000397022012775244!GO:0008250;oligosaccharyl transferase complex;0.000415401897058554!GO:0046474;glycerophospholipid biosynthetic process;0.000425544622100913!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000448580581648188!GO:0007052;mitotic spindle organization and biogenesis;0.000465661832021223!GO:0006401;RNA catabolic process;0.000468482935324212!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000471093905969081!GO:0016741;transferase activity, transferring one-carbon groups;0.000476550482739007!GO:0016023;cytoplasmic membrane-bound vesicle;0.000486872153105063!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000493732528951265!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000500595394236047!GO:0005048;signal sequence binding;0.000503539106893715!GO:0031982;vesicle;0.000523147747088726!GO:0030880;RNA polymerase complex;0.000523147747088726!GO:0006402;mRNA catabolic process;0.000560595909748738!GO:0004004;ATP-dependent RNA helicase activity;0.000563537278402449!GO:0006612;protein targeting to membrane;0.000587922339515718!GO:0004576;oligosaccharyl transferase activity;0.000595735678755!GO:0051252;regulation of RNA metabolic process;0.000605542840501367!GO:0032508;DNA duplex unwinding;0.000605664618835344!GO:0032392;DNA geometric change;0.000605664618835344!GO:0005637;nuclear inner membrane;0.000658934837652956!GO:0005885;Arp2/3 protein complex;0.000680208327133194!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000680208327133194!GO:0008168;methyltransferase activity;0.000706404169627246!GO:0044431;Golgi apparatus part;0.000722674545372708!GO:0031124;mRNA 3'-end processing;0.000752775832400811!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000762933556071558!GO:0015399;primary active transmembrane transporter activity;0.000762933556071558!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000769258203108203!GO:0015631;tubulin binding;0.00078081717416114!GO:0051920;peroxiredoxin activity;0.000791147182711088!GO:0000082;G1/S transition of mitotic cell cycle;0.000798289798992562!GO:0031323;regulation of cellular metabolic process;0.000813799629956757!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00081947193774146!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00081947193774146!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00081947193774146!GO:0016251;general RNA polymerase II transcription factor activity;0.000852505121592156!GO:0031252;leading edge;0.000898069667941395!GO:0031410;cytoplasmic vesicle;0.000908560337917098!GO:0005758;mitochondrial intermembrane space;0.000960448963365308!GO:0048471;perinuclear region of cytoplasm;0.000987572925038704!GO:0031072;heat shock protein binding;0.0010103117713916!GO:0043488;regulation of mRNA stability;0.00101236814249807!GO:0043487;regulation of RNA stability;0.00101236814249807!GO:0032561;guanyl ribonucleotide binding;0.00113524130119487!GO:0019001;guanyl nucleotide binding;0.00113524130119487!GO:0016481;negative regulation of transcription;0.00113806264991726!GO:0006289;nucleotide-excision repair;0.00116252660008585!GO:0043284;biopolymer biosynthetic process;0.001230059556983!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00124490537773391!GO:0000428;DNA-directed RNA polymerase complex;0.00124490537773391!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00128046121750277!GO:0033116;ER-Golgi intermediate compartment membrane;0.00129060090804443!GO:0006268;DNA unwinding during replication;0.00129868833326948!GO:0046489;phosphoinositide biosynthetic process;0.00135113069725599!GO:0003711;transcription elongation regulator activity;0.00137844662049015!GO:0006818;hydrogen transport;0.00139643708552553!GO:0006350;transcription;0.00148171753929167!GO:0015992;proton transport;0.00148506968939088!GO:0006405;RNA export from nucleus;0.00162591052570474!GO:0018196;peptidyl-asparagine modification;0.0016472981826144!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0016472981826144!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00170306462043231!GO:0006672;ceramide metabolic process;0.00172015980299202!GO:0006520;amino acid metabolic process;0.00175369592107381!GO:0051087;chaperone binding;0.00176959751910931!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00180830430453051!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00180830430453051!GO:0005773;vacuole;0.00183919492539707!GO:0000922;spindle pole;0.00187719299215919!GO:0005876;spindle microtubule;0.00192363384870132!GO:0022890;inorganic cation transmembrane transporter activity;0.00201531403314093!GO:0048500;signal recognition particle;0.00207777767226832!GO:0016272;prefoldin complex;0.00218095677172587!GO:0000792;heterochromatin;0.00225530431882907!GO:0035258;steroid hormone receptor binding;0.00234471035583535!GO:0004527;exonuclease activity;0.00253738064006831!GO:0031970;organelle envelope lumen;0.00253738064006831!GO:0043596;nuclear replication fork;0.00257414350312615!GO:0006144;purine base metabolic process;0.0026446698502079!GO:0006284;base-excision repair;0.00267664267595327!GO:0008361;regulation of cell size;0.00270873299415669!GO:0006338;chromatin remodeling;0.00303054396803657!GO:0008139;nuclear localization sequence binding;0.00303595698799656!GO:0008312;7S RNA binding;0.0031096755902992!GO:0004518;nuclease activity;0.0031634001234445!GO:0006611;protein export from nucleus;0.00341611461848728!GO:0005669;transcription factor TFIID complex;0.00341611461848728!GO:0031123;RNA 3'-end processing;0.0034969655092448!GO:0046519;sphingoid metabolic process;0.00351037498758186!GO:0048487;beta-tubulin binding;0.00375973022566328!GO:0006650;glycerophospholipid metabolic process;0.00388285495061326!GO:0050662;coenzyme binding;0.00390210584908722!GO:0003746;translation elongation factor activity;0.00394275414341778!GO:0016049;cell growth;0.00403448926227586!GO:0042393;histone binding;0.00413170197359698!GO:0006378;mRNA polyadenylation;0.00418487146777926!GO:0051789;response to protein stimulus;0.00420042557615668!GO:0006986;response to unfolded protein;0.00420042557615668!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00420484671152419!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.00426454714379029!GO:0008180;signalosome;0.0043750397383438!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00445575429482134!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00446986493775581!GO:0000725;recombinational repair;0.00463151490690946!GO:0000724;double-strand break repair via homologous recombination;0.00463151490690946!GO:0006595;polyamine metabolic process;0.00467395076034816!GO:0016407;acetyltransferase activity;0.00468804963843295!GO:0007050;cell cycle arrest;0.00479137557202214!GO:0046467;membrane lipid biosynthetic process;0.00489581314658123!GO:0000049;tRNA binding;0.0049004728616917!GO:0045045;secretory pathway;0.00491825441190318!GO:0000339;RNA cap binding;0.00500670617108947!GO:0006891;intra-Golgi vesicle-mediated transport;0.00500670617108947!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00505314946377102!GO:0032200;telomere organization and biogenesis;0.00511585386241878!GO:0000723;telomere maintenance;0.00511585386241878!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00554844094623274!GO:0045047;protein targeting to ER;0.00554844094623274!GO:0030867;rough endoplasmic reticulum membrane;0.00554844094623274!GO:0030521;androgen receptor signaling pathway;0.0055717860097064!GO:0030027;lamellipodium;0.00559715216054174!GO:0000228;nuclear chromosome;0.00559715216054174!GO:0007040;lysosome organization and biogenesis;0.0056150872825437!GO:0009112;nucleobase metabolic process;0.00572490606051908!GO:0043624;cellular protein complex disassembly;0.00578826403477204!GO:0000910;cytokinesis;0.00591184227996841!GO:0000323;lytic vacuole;0.00607120454244124!GO:0005764;lysosome;0.00607120454244124!GO:0044454;nuclear chromosome part;0.00611408080369917!GO:0016126;sterol biosynthetic process;0.00616174863867144!GO:0008022;protein C-terminus binding;0.00620013814890384!GO:0009451;RNA modification;0.00635861414679442!GO:0042158;lipoprotein biosynthetic process;0.00658178965471744!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00663709462155596!GO:0006695;cholesterol biosynthetic process;0.00664620567263984!GO:0005791;rough endoplasmic reticulum;0.00689952521947975!GO:0016584;nucleosome positioning;0.00710090464348781!GO:0030658;transport vesicle membrane;0.00729507263225616!GO:0030384;phosphoinositide metabolic process;0.00745480686940651!GO:0003702;RNA polymerase II transcription factor activity;0.00749297384038571!GO:0006270;DNA replication initiation;0.0075890756476987!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00759564676007579!GO:0030137;COPI-coated vesicle;0.00768710224130952!GO:0004674;protein serine/threonine kinase activity;0.00772987683348658!GO:0043601;nuclear replisome;0.00772987683348658!GO:0030894;replisome;0.00772987683348658!GO:0032259;methylation;0.00802894854656029!GO:0030036;actin cytoskeleton organization and biogenesis;0.00824252298383868!GO:0000178;exosome (RNase complex);0.00839165690705429!GO:0006497;protein amino acid lipidation;0.00845958791427563!GO:0043492;ATPase activity, coupled to movement of substances;0.00847752177021448!GO:0004003;ATP-dependent DNA helicase activity;0.00857759636309656!GO:0046483;heterocycle metabolic process;0.00862730898203643!GO:0009303;rRNA transcription;0.00891313710047997!GO:0017166;vinculin binding;0.00893801948853356!GO:0033673;negative regulation of kinase activity;0.00902454387638773!GO:0006469;negative regulation of protein kinase activity;0.00902454387638773!GO:0016197;endosome transport;0.00931904623253408!GO:0030663;COPI coated vesicle membrane;0.00932117874827261!GO:0030126;COPI vesicle coat;0.00932117874827261!GO:0005832;chaperonin-containing T-complex;0.00952120038735608!GO:0043414;biopolymer methylation;0.0095695771093818!GO:0005741;mitochondrial outer membrane;0.0095695771093818!GO:0051348;negative regulation of transferase activity;0.0095695771093818!GO:0007264;small GTPase mediated signal transduction;0.0096217894800279!GO:0000819;sister chromatid segregation;0.00963409860258388!GO:0030132;clathrin coat of coated pit;0.00974828179620651!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00984682987339156!GO:0000070;mitotic sister chromatid segregation;0.00988901964020218!GO:0000781;chromosome, telomeric region;0.00988901964020218!GO:0031902;late endosome membrane;0.00991640811247052!GO:0000139;Golgi membrane;0.00999980371233703!GO:0031968;organelle outer membrane;0.0102574680808716!GO:0009116;nucleoside metabolic process;0.010300643323285!GO:0004532;exoribonuclease activity;0.0108591009312858!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0108591009312858!GO:0031570;DNA integrity checkpoint;0.0109157295719871!GO:0006730;one-carbon compound metabolic process;0.0110825525769966!GO:0045892;negative regulation of transcription, DNA-dependent;0.0110825525769966!GO:0007021;tubulin folding;0.0113663755360764!GO:0008632;apoptotic program;0.0117230166199021!GO:0032984;macromolecular complex disassembly;0.0117230166199021!GO:0006275;regulation of DNA replication;0.0117230166199021!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.0118024971612971!GO:0000118;histone deacetylase complex;0.0118642644477838!GO:0019752;carboxylic acid metabolic process;0.011979857809906!GO:0003677;DNA binding;0.0122446547077316!GO:0043022;ribosome binding;0.0123387010336066!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0125367544462868!GO:0031625;ubiquitin protein ligase binding;0.0125367544462868!GO:0042770;DNA damage response, signal transduction;0.0125367544462868!GO:0006082;organic acid metabolic process;0.0125367544462868!GO:0030660;Golgi-associated vesicle membrane;0.0127227614039604!GO:0019867;outer membrane;0.0128310255991152!GO:0007033;vacuole organization and biogenesis;0.0131923033941629!GO:0030134;ER to Golgi transport vesicle;0.0134006042603087!GO:0008017;microtubule binding;0.0135941264728913!GO:0044450;microtubule organizing center part;0.0136822840436153!GO:0008276;protein methyltransferase activity;0.0138669669920553!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0140815941290817!GO:0000209;protein polyubiquitination;0.0140815941290817!GO:0030518;steroid hormone receptor signaling pathway;0.0144997887943539!GO:0031577;spindle checkpoint;0.0144997887943539!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0146284870185202!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0146783498417199!GO:0010468;regulation of gene expression;0.0148064436964462!GO:0044262;cellular carbohydrate metabolic process;0.0148064436964462!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0155317913448117!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0157442689512854!GO:0032774;RNA biosynthetic process;0.0162794156856721!GO:0006519;amino acid and derivative metabolic process;0.0163733758776602!GO:0043241;protein complex disassembly;0.0164058229933859!GO:0006506;GPI anchor biosynthetic process;0.016610657445131!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0167634570461888!GO:0035267;NuA4 histone acetyltransferase complex;0.0171058930358264!GO:0005862;muscle thin filament tropomyosin;0.0171105849963936!GO:0006376;mRNA splice site selection;0.0173499887935648!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0173499887935648!GO:0030118;clathrin coat;0.0175666452745992!GO:0006740;NADPH regeneration;0.0178250946536796!GO:0006098;pentose-phosphate shunt;0.0178250946536796!GO:0005869;dynactin complex;0.0182679946353488!GO:0051098;regulation of binding;0.01831994316965!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0183726364070054!GO:0046966;thyroid hormone receptor binding;0.0184717694505176!GO:0051540;metal cluster binding;0.0186158100879995!GO:0051536;iron-sulfur cluster binding;0.0186158100879995!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0186480023276128!GO:0015002;heme-copper terminal oxidase activity;0.0186480023276128!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0186480023276128!GO:0004129;cytochrome-c oxidase activity;0.0186480023276128!GO:0051539;4 iron, 4 sulfur cluster binding;0.0187100082076541!GO:0043189;H4/H2A histone acetyltransferase complex;0.0187100082076541!GO:0006351;transcription, DNA-dependent;0.0190803096142898!GO:0046128;purine ribonucleoside metabolic process;0.0192577782054721!GO:0042278;purine nucleoside metabolic process;0.0192577782054721!GO:0008415;acyltransferase activity;0.0192577782054721!GO:0030176;integral to endoplasmic reticulum membrane;0.0198285559849875!GO:0008408;3'-5' exonuclease activity;0.0198316550879212!GO:0003887;DNA-directed DNA polymerase activity;0.0204602418547936!GO:0006400;tRNA modification;0.020505614125911!GO:0050681;androgen receptor binding;0.0208566706959158!GO:0030496;midbody;0.0208566706959158!GO:0004722;protein serine/threonine phosphatase activity;0.020948442502862!GO:0000123;histone acetyltransferase complex;0.0214993530385817!GO:0048037;cofactor binding;0.0216448808351849!GO:0008287;protein serine/threonine phosphatase complex;0.0217314476857059!GO:0006007;glucose catabolic process;0.0220648528021236!GO:0006360;transcription from RNA polymerase I promoter;0.0223041455162664!GO:0030127;COPII vesicle coat;0.0223892624617919!GO:0012507;ER to Golgi transport vesicle membrane;0.0223892624617919!GO:0006505;GPI anchor metabolic process;0.0225017394442096!GO:0000152;nuclear ubiquitin ligase complex;0.0228357749408179!GO:0022411;cellular component disassembly;0.0234692271528856!GO:0000726;non-recombinational repair;0.023728339288455!GO:0016746;transferase activity, transferring acyl groups;0.0237776197604764!GO:0043631;RNA polyadenylation;0.023792794387999!GO:0008097;5S rRNA binding;0.0239115146959221!GO:0006301;postreplication repair;0.0240612912850437!GO:0005663;DNA replication factor C complex;0.0240649851932609!GO:0006892;post-Golgi vesicle-mediated transport;0.0240797738433861!GO:0043130;ubiquitin binding;0.0244536906221973!GO:0032182;small conjugating protein binding;0.0244536906221973!GO:0065009;regulation of a molecular function;0.0245196527505977!GO:0007004;telomere maintenance via telomerase;0.024552579670313!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0250455872196471!GO:0047485;protein N-terminus binding;0.0256252490531737!GO:0042802;identical protein binding;0.0256872425727185!GO:0005774;vacuolar membrane;0.0258990451284643!GO:0008538;proteasome activator activity;0.0264160783570383!GO:0043407;negative regulation of MAP kinase activity;0.026851343532345!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.026851343532345!GO:0006220;pyrimidine nucleotide metabolic process;0.0269791903065717!GO:0005905;coated pit;0.0273817266717113!GO:0031371;ubiquitin conjugating enzyme complex;0.0276946987390306!GO:0000096;sulfur amino acid metabolic process;0.0284054320436734!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0295841427174474!GO:0006643;membrane lipid metabolic process;0.0297327327150601!GO:0022884;macromolecule transmembrane transporter activity;0.0298095022420696!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0298095022420696!GO:0019783;small conjugating protein-specific protease activity;0.0302523867364207!GO:0030041;actin filament polymerization;0.0302523867364207!GO:0030029;actin filament-based process;0.0305483399699364!GO:0008320;protein transmembrane transporter activity;0.0310090129929906!GO:0006644;phospholipid metabolic process;0.0310594848357405!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0311085951025827!GO:0001558;regulation of cell growth;0.0311728893749692!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.031677495218962!GO:0005095;GTPase inhibitor activity;0.031769778234236!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0318206032030523!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0318206032030523!GO:0000077;DNA damage checkpoint;0.032058555130466!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0321355009843442!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0321355009843442!GO:0004448;isocitrate dehydrogenase activity;0.0329641707349283!GO:0008610;lipid biosynthetic process;0.0330332884168738!GO:0040029;regulation of gene expression, epigenetic;0.0330446129945098!GO:0030508;thiol-disulfide exchange intermediate activity;0.0330613082184441!GO:0005784;translocon complex;0.0331351535447415!GO:0006607;NLS-bearing substrate import into nucleus;0.033251963371748!GO:0000086;G2/M transition of mitotic cell cycle;0.0338676754196825!GO:0051881;regulation of mitochondrial membrane potential;0.0339059025394988!GO:0005875;microtubule associated complex;0.0344281846481038!GO:0065007;biological regulation;0.0350693292971328!GO:0000790;nuclear chromatin;0.0371986703141466!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0373840029398794!GO:0005732;small nucleolar ribonucleoprotein complex;0.0376289721035566!GO:0006596;polyamine biosynthetic process;0.0382733909188715!GO:0004843;ubiquitin-specific protease activity;0.0383052771984713!GO:0051287;NAD binding;0.0384731266829578!GO:0016790;thiolester hydrolase activity;0.0384731266829578!GO:0004523;ribonuclease H activity;0.0404473080127065!GO:0008536;Ran GTPase binding;0.0414157853811644!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0414157853811644!GO:0030133;transport vesicle;0.0418867025224577!GO:0001832;blastocyst growth;0.0423097414714447!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0433148869244949!GO:0045039;protein import into mitochondrial inner membrane;0.0433148869244949!GO:0005652;nuclear lamina;0.0438363996944199!GO:0000793;condensed chromosome;0.0443211148121657!GO:0042769;DNA damage response, detection of DNA damage;0.0443953904313424!GO:0000175;3'-5'-exoribonuclease activity;0.0462259054930989!GO:0009083;branched chain family amino acid catabolic process;0.0462259054930989!GO:0030911;TPR domain binding;0.0471987560776307!GO:0019887;protein kinase regulator activity;0.0472381192495033!GO:0009113;purine base biosynthetic process;0.0472431517977164!GO:0007034;vacuolar transport;0.0472431517977164!GO:0000805;X chromosome;0.0474492076065355!GO:0001740;Barr body;0.0474492076065355!GO:0030119;AP-type membrane coat adaptor complex;0.0477131863336155!GO:0051128;regulation of cellular component organization and biogenesis;0.0481173494154793!GO:0009124;nucleoside monophosphate biosynthetic process;0.0481173494154793!GO:0009123;nucleoside monophosphate metabolic process;0.0481173494154793!GO:0030262;apoptotic nuclear changes;0.0487464310376603!GO:0005765;lysosomal membrane;0.0487464310376603!GO:0006778;porphyrin metabolic process;0.0488010669703732!GO:0033013;tetrapyrrole metabolic process;0.0488010669703732!GO:0004563;beta-N-acetylhexosaminidase activity;0.0491549194107821!GO:0009119;ribonucleoside metabolic process;0.0492479380129123!GO:0009081;branched chain family amino acid metabolic process;0.0492479380129123!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0492666997203658!GO:0010257;NADH dehydrogenase complex assembly;0.0492666997203658!GO:0033108;mitochondrial respiratory chain complex assembly;0.0492666997203658!GO:0017134;fibroblast growth factor binding;0.0493413802342427!GO:0006278;RNA-dependent DNA replication;0.0499151146123429
|sample_id=10809
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=kidney
|top_motifs=NANOG:1.68689143108;PDX1:1.57610119739;RXR{A,B,G}:1.55006332931;NKX2-3_NKX2-5:1.51785131903;GFI1:1.35881404194;FOXQ1:1.35750297378;ONECUT1,2:1.32885654771;NFY{A,B,C}:1.24727963675;HOX{A5,B5}:1.22150485541;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.19283821072;E2F1..5:1.13198352181;ZNF143:1.12665483041;bHLH_family:1.12590756637;YY1:1.11922481074;TFDP1:1.06714958454;ZBTB6:1.06299151565;PAX8:1.04268559777;VSX1,2:1.03445068227;HOX{A6,A7,B6,B7}:1.03037925519;TP53:1.02273490056;STAT5{A,B}:1.00737151775;RFX1:0.998784246605;HOXA9_MEIS1:0.976602401435;NRF1:0.901523772413;GTF2A1,2:0.890438690836;CDX1,2,4:0.854020677272;LHX3,4:0.78862375163;TOPORS:0.778149770511;CRX:0.770337558885;ARID5B:0.764992884659;POU2F1..3:0.750898258961;MYB:0.744099973164;OCT4_SOX2{dimer}:0.733325945045;PATZ1:0.723723916465;SOX{8,9,10}:0.69636757596;GCM1,2:0.684981016789;POU3F1..4:0.671702890133;RFX2..5_RFXANK_RFXAP:0.652561464021;NR3C1:0.562068352016;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.559522701327;TEF:0.525264936135;ZNF384:0.482472334425;KLF4:0.471534116783;PAX3,7:0.420960953278;HMGA1,2:0.413064959541;ELK1,4_GABP{A,B1}:0.408298300778;XCPE1{core}:0.341804403709;HIC1:0.328985058363;SREBF1,2:0.325742409978;RREB1:0.320721344752;POU1F1:0.309223474154;EN1,2:0.308598191048;PITX1..3:0.300351588149;BREu{core}:0.300053635797;HNF4A_NR2F1,2:0.281432101162;FOXM1:0.267223922841;PPARG:0.264063645249;FOX{I1,J2}:0.259291050537;TLX1..3_NFIC{dimer}:0.24287699882;NR5A1,2:0.230730851151;ESRRA:0.224417673604;MZF1:0.221287525223;EBF1:0.183852531042;PAX4:0.177549297598;CDC5L:0.175358106533;PRRX1,2:0.156361911307;EGR1..3:0.155921035649;RBPJ:0.142378481165;CUX2:0.124581880078;FOXA2:0.115828383573;ADNP_IRX_SIX_ZHX:0.114120542929;MYOD1:0.0995015733565;UFEwm:0.0809404923845;FOXL1:0.078935501033;SP1:0.0695594442441;TFAP2{A,C}:0.0591956905451;IKZF2:0.0478953861881;SNAI1..3:0.0422949301261;REST:0.0148368405272;ZIC1..3:0.00794042160399;TEAD1:0.00633984872365;PBX1:-0.00236565556201;NKX3-2:-0.0260634240445;NR6A1:-0.0268637437201;FOXP1:-0.0613311025843;ATF2:-0.0681245543428;HNF1A:-0.0692740351506;ALX1:-0.0832061764953;TFAP2B:-0.0927263873246;MEF2{A,B,C,D}:-0.0938867637492;POU6F1:-0.105066434201;HOX{A4,D4}:-0.106120973794;EVI1:-0.109573865322;AIRE:-0.11450220681;RXRA_VDR{dimer}:-0.129622188373;TAL1_TCF{3,4,12}:-0.138706192744;PAX5:-0.139743386651;GTF2I:-0.149169614019;CREB1:-0.152987156948;ATF4:-0.161651578215;SOX17:-0.169860077029;SRF:-0.175371232666;RORA:-0.185572783336;NKX2-1,4:-0.205852853385;ZBTB16:-0.214390707183;ESR1:-0.227094042383;ZEB1:-0.228593788614;GFI1B:-0.229603285426;NKX6-1,2:-0.232711992781;GATA6:-0.233785979872;NKX2-2,8:-0.23517666146;ZNF238:-0.269203838563;GATA4:-0.269573816388;JUN:-0.271214814702;DMAP1_NCOR{1,2}_SMARC:-0.275650791863;BACH2:-0.293395012375;MED-1{core}:-0.299011699931;LEF1_TCF7_TCF7L1,2:-0.30719141258;ZNF148:-0.322646362505;FOXD3:-0.347288391046;SPIB:-0.35889345264;ZFP161:-0.367347192197;TFCP2:-0.384253609931;NFKB1_REL_RELA:-0.388097379361;BPTF:-0.38967742353;MAZ:-0.392115440791;NANOG{mouse}:-0.399140078245;LMO2:-0.41421022949;PAX1,9:-0.416948081507;MTE{core}:-0.419760075259;FOX{F1,F2,J1}:-0.43139261956;FOXP3:-0.432874602286;FOS_FOS{B,L1}_JUN{B,D}:-0.43585301027;NKX3-1:-0.442801265815;TLX2:-0.44406528484;HES1:-0.45542991162;NFE2L2:-0.48052459321;NFE2:-0.488654411217;TGIF1:-0.49144564489;FOXN1:-0.525656333851;HAND1,2:-0.541520409888;TFAP4:-0.551691200438;MYBL2:-0.553739476117;FOX{D1,D2}:-0.58874508175;HIF1A:-0.594382250173;CEBPA,B_DDIT3:-0.59769497772;NR1H4:-0.60659991409;ATF6:-0.610662461156;PAX2:-0.624917770824;HBP1_HMGB_SSRP1_UBTF:-0.62957877056;NHLH1,2:-0.629811164469;DBP:-0.639779152201;FOSL2:-0.645579186856;RUNX1..3:-0.683567586281;MTF1:-0.684790237466;POU5F1:-0.707129921129;ELF1,2,4:-0.735371277541;NFE2L1:-0.741925905298;HLF:-0.746086225999;NFIX:-0.751639706913;IKZF1:-0.755194557044;ATF5_CREB3:-0.759808301296;SPI1:-0.763907394433;NFIL3:-0.793545475829;PRDM1:-0.846054536381;ETS1,2:-0.850502432032;TBP:-0.881739685045;AR:-0.892471037875;MYFfamily:-0.893592279938;ZNF423:-0.927160970528;SMAD1..7,9:-0.937033528624;GZF1:-0.950047969677;FOXO1,3,4:-0.958215650787;HSF1,2:-0.975452598637;AHR_ARNT_ARNT2:-1.0024036756;SPZ1:-1.04230184389;SOX5:-1.05484987535;T:-1.06768713843;STAT1,3:-1.07578412013;SOX2:-1.08542627573;NFATC1..3:-1.12406599078;ALX4:-1.12525760827;TBX4,5:-1.14922225335;IRF7:-1.19011399185;STAT2,4,6:-1.21625517321;MAFB:-1.24815162869;IRF1,2:-1.27478546732;XBP1:-1.34668963979;EP300:-1.36072934341;HMX1:-1.71348431712;GLI1..3:-1.75843586872;PAX6:-1.97350649981
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10809-111A8;search_select_hide=table117:FF:10809-111A8
}}
}}

Latest revision as of 15:06, 3 June 2020

Name:Wilms' tumor cell line:G-401
Species:Human (Homo sapiens)
Library ID:CNhs11892
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuekidney
dev stageNA
sexmale
age3 months
cell typeunclassifiable
cell lineG-401
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00006011
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11892 CAGE DRX007794 DRR008666
Accession ID Hg19

Library idBAMCTSS
CNhs11892 DRZ000091 DRZ001476
Accession ID Hg38

Library idBAMCTSS
CNhs11892 DRZ011441 DRZ012826
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
RNA-Seq  SAMD00006011
Library accession numbers

Library idMethodExp. accession idRun accession id
RDhi10087 RNA-Seq DRX057144 DRR062903
Accession ID Hg19

Library idBAMCTSS
RDhi10087 DRZ007979


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.215
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.514
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0.909
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00496
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.107
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0897
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0111
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.104
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0441
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.431
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.0104
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.00257
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.548
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0441
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.0841
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.0441
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11892

Jaspar motifP-value
MA0002.25.21649e-5
MA0003.10.134
MA0004.10.063
MA0006.10.7
MA0007.10.339
MA0009.10.0434
MA0014.10.659
MA0017.10.777
MA0018.20.239
MA0019.10.676
MA0024.12.52761e-5
MA0025.10.206
MA0027.10.732
MA0028.10.0617
MA0029.10.239
MA0030.10.196
MA0031.10.307
MA0035.20.389
MA0038.10.00579
MA0039.20.262
MA0040.10.0904
MA0041.10.205
MA0042.10.16
MA0043.10.616
MA0046.10.479
MA0047.20.355
MA0048.10.00745
MA0050.16.60702e-14
MA0051.14.07582e-8
MA0052.10.386
MA0055.15.41895e-4
MA0057.10.437
MA0058.10.0719
MA0059.10.222
MA0060.14.38202e-16
MA0061.10.00388
MA0062.20.995
MA0065.20.381
MA0066.10.947
MA0067.10.285
MA0068.10.903
MA0069.10.897
MA0070.10.3
MA0071.10.688
MA0072.10.648
MA0073.10.55
MA0074.10.843
MA0076.10.0806
MA0077.10.996
MA0078.10.322
MA0079.20.447
MA0080.21.29106e-11
MA0081.10.112
MA0083.10.548
MA0084.10.552
MA0087.10.146
MA0088.10.00911
MA0090.10.604
MA0091.10.145
MA0092.10.157
MA0093.10.0448
MA0099.22.1617e-11
MA0100.10.115
MA0101.10.178
MA0102.25.02012e-4
MA0103.10.855
MA0104.20.0515
MA0105.10.00924
MA0106.10.157
MA0107.10.00392
MA0108.20.287
MA0111.10.372
MA0112.20.00312
MA0113.10.00968
MA0114.10.27
MA0115.10.0478
MA0116.10.0203
MA0117.10.622
MA0119.10.202
MA0122.10.614
MA0124.10.028
MA0125.10.108
MA0131.10.603
MA0135.10.924
MA0136.17.2833e-9
MA0137.20.00816
MA0138.20.983
MA0139.10.656
MA0140.10.303
MA0141.10.97
MA0142.10.159
MA0143.10.354
MA0144.12.18879e-4
MA0145.10.281
MA0146.10.358
MA0147.10.0571
MA0148.10.538
MA0149.10.996
MA0150.10.00148
MA0152.10.629
MA0153.10.387
MA0154.10.0289
MA0155.10.234
MA0156.12.40635e-5
MA0157.10.0825
MA0159.10.992
MA0160.10.977
MA0162.10.997
MA0163.10.129
MA0164.10.918
MA0258.10.196
MA0259.10.238



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11892

Novel motifP-value
10.857
100.166
1000.161
1010.929
1020.0723
1030.37
1040.21
1050.646
1060.0081
1070.0947
1080.636
1090.76
110.863
1100.929
1110.43
1120.202
1130.0443
1140.0512
1150.684
1160.8
1170.306
1180.683
1190.0793
120.55
1200.546
1210.355
1220.507
1230.743
1240.301
1250.652
1260.342
1270.82
1280.102
1290.792
130.0542
1300.0419
1310.257
1320.722
1330.316
1340.247
1350.0384
1360.787
1370.954
1380.208
1390.0134
140.641
1400.0511
1410.423
1420.68
1430.167
1440.46
1450.745
1460.194
1470.723
1480.0122
1490.078
150.213
1500.721
1510.0677
1520.54
1530.0748
1540.163
1550.539
1560.316
1570.946
1580.167
1590.531
160.613
1600.277
1610.434
1620.301
1630.297
1640.28
1650.0938
1660.631
1670.686
1680.0389
1690.249
170.624
180.181
190.262
20.2
200.431
210.698
220.433
232.69268e-4
240.86
250.437
260.377
270.0865
280.905
290.968
30.409
300.656
310.774
320.0319
330.536
340.543
350.836
360.549
370.953
380.438
390.503
40.671
400.383
410.1
420.768
430.126
440.717
450.428
460.339
470.567
480.859
490.373
50.0641
500.907
510.735
520.409
530.103
540.585
550.257
560.811
570.816
580.0312
590.15
60.998
600.0554
610.9
620.0225
630.284
640.531
650.103
660.0089
670.637
680.059
690.419
70.969
700.054
710.319
720.26
730.5
740.336
750.298
760.891
770.829
780.703
790.18
80.674
800.00378
810.488
820.159
830.467
840.727
850.0631
860.456
870.0926
880.926
890.303
90.131
900.386
910.067
920.0069
930.122
940.0753
950.0275
960.426
970.339
980.43
990.89



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11892


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

DOID: Disease
4 (disease)
7 (disease of anatomical entity)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002113 (kidney)
0002100 (trunk)
0000062 (organ)
0000475 (organism subdivision)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0005173 (abdominal segment element)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100067 (kidney cell line sample)
0103192 (renal cancer cell line sample)
0102586 (G-401 cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0003104 (mesenchyme)
UBERON:0003918 (kidney mesenchyme)
UBERON:0007687 (kidney field)

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