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{{f5samples
{{f5samples
|id=FF:10405-106A9
|DRA_sample_Accession=CAGE@SAMD00004824
|name=acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed)
|accession_numbers=CAGE;DRX007815;DRR008687;DRZ000112;DRZ001497;DRZ011462;DRZ012847
|sample_id=10405
|ancestors_in_anatomy_facet=
|rna_tube_id=106A9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000738,CL:0002087,CL:0000255,CL:0000576
|rna_box=106
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|rna_position=A9
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101370,FF:0101035,FF:0101883,FF:0102332,FF:0100740
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!2.52!330.36!IRF8;;chr11:47400078..47400106,-!p1@SPI1!2.28!191.71!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.04!130.64!MYB;;chr2:68592406..68592424,+!p1@PLEK!1.99!96.94!PLEK;;chr9:96717629..96717644,-!p1@BARX1!1.86!70.91!BARX1;;chr12:54778471..54778528,-!p1@ZNF385A!1.86!70.74!ZNF385A;;chr7:115670804..115670825,-!p1@TFEC!1.76!56.56!TFEC;;chr6:135502408..135502459,+!p2@MYB!1.72!58.73!MYB;;chr2:63277948..63277974,+!p1@OTX1!1.71!49.72!OTX1;;chr19:33793430..33793447,-!p1@CEBPA!1.69!194.38!CEBPA;;chr3:18486354..18486377,-!p2@SATB1!1.69!58.90!SATB1;;chr1:92951607..92951661,-!p1@GFI1!1.59!38.04!GFI1;;chr13:72441315..72441454,-!p1@DACH1!1.58!71.91!DACH1;;chr1:92949331..92949377,-!p2@GFI1!1.57!36.37!GFI1;;chr2:200322654..200322707,-!p2@SATB2!1.53!47.72!SATB2;;chr10:31288398..31288455,-!p2@ZNF438!1.50!35.87!ZNF438;;chr1:156460436..156460462,-!p7@MEF2D!1.50!30.87!MEF2D;;chr1:41157421..41157482,+!p2@NFYC!1.43!285.98!NFYC;;chr7:50344289..50344323,+!p1@IKZF1!1.43!26.03!IKZF1;;chr1:41157363..41157416,+!p1@NFYC!1.42!460.17!NFYC;;chr7:137620650..137620677,-!p3@CREB3L2!1.42!25.19!CREB3L2;;chr2:175199675..175199688,+!p1@SP9!1.41!24.86!SP9;;chr11:47400062..47400077,-!p2@SPI1!1.41!24.53!SPI1;;chr6:135516877..135516900,+!p5@MYB!1.39!23.36!MYB;;chr5:72744594..72744609,-!p1@FOXD1!1.37!99.11!FOXD1;;chr5:88178983..88179012,-!p1@MEF2C!1.35!160.34!MEF2C;;chr6:85473156..85473210,-!p2@TBX18!1.34!25.53!TBX18;;chr1:40997285..40997352,+!p1@ZNF684!1.33!70.58!ZNF684;;chr1:40942922..40942997,+!p1@ZNF642!1.33!52.39!ZNF642;;chr1:40997363..40997392,+!p2@ZNF684!1.32!25.69!ZNF684;;chr7:27205136..27205164,-!p1@HOXA9!1.32!19.86!HOXA9;;chr7:137620684..137620711,-!p4@CREB3L2!1.32!19.69!CREB3L2;;chr6:34204973..34204990,+!p4@HMGA1!1.29!236.76!HMGA1;;chr7:113726357..113726443,+!p1@FOXP2!1.29!31.87!FOXP2;;chr2:145277640..145277771,-!p1@ZEB2!1.28!235.59!ZEB2;;chr6:135502472..135502489,+!p3@MYB!1.28!18.02!MYB;;chr2:63277978..63277995,+!p2@OTX1!1.27!17.69!OTX1;;chr1:156470515..156470542,-!p2@MEF2D!1.26!87.93!MEF2D;;chr1:3569072..3569093,+!p1@TP73!1.26!17.35!TP73;;chr1:50889103..50889145,-!p1@DMRTA2!1.26!17.02!DMRTA2;;chr18:55102598..55102623,+!p1@ONECUT2!1.25!16.68!ONECUT2;;chr1:247171316..247171336,-!p3@ZNF695!1.24!24.19!ZNF695;;chr7:27205106..27205134,-!p2@HOXA9!1.24!16.52!HOXA9;;chr7:27213893..27213954,-!p1@HOXA10!1.24!16.52!HOXA10;;chr7:27224795..27224840,-!p2@HOXA11!1.24!16.35!HOXA11;;chr7:27224842..27224872,-!p1@HOXA11!1.23!16.02!HOXA11;;chr11:47399996..47400014,-!p4@SPI1!1.22!15.52!SPI1;;chr18:22932080..22932170,-!p1@ZNF521!1.21!63.40!ZNF521;;chr14:75988771..75988826,+!p1@BATF!1.21!20.36!BATF;;chr6:135516909..135516925,+!p6@MYB!1.21!15.18!MYB;;chr16:54319010..54319041,-!p8@IRX3!1.19!14.52!IRX3;;chr3:18480217..18480239,-!p3@SATB1!1.19!14.35!SATB1;;chr7:50343634..50343717,+!p2@IKZF1!1.18!14.02!IKZF1;;chr3:157824001..157824078,-!p2@SHOX2!1.17!13.85!SHOX2;;chr1:247242048..247242098,-!p1@ZNF670,p1@ZNF695!1.16!48.39!ZNF670;;chr7:128577972..128578047,+!p1@IRF5!1.16!21.36!IRF5;;chr18:22805268..22805280,-!p8@ZNF521!1.16!13.35!ZNF521;;chr1:92952473..92952489,-!p3@GFI1!1.15!13.01!GFI1;;chr3:157824202..157824211,-!p3@SHOX2!1.15!13.01!SHOX2;;chr2:68592394..68592405,+!p2@PLEK!1.14!12.68!PLEK;;chr1:156460473..156460486,-!p12@MEF2D!1.14!12.68!MEF2D;;chr10:31288370..31288393,-!p3@ZNF438!1.13!12.51!ZNF438;;chr13:41593425..41593480,-!p1@ELF1!1.11!75.75!ELF1;;chr20:42295745..42295765,+!p1@MYBL2!1.10!187.37!MYBL2;;chr11:47399947..47399961,-!p3@SPI1!1.09!11.35!SPI1;;chr16:54320646..54320672,-!p2@IRX3!1.07!16.52!IRX3;;chr18:55102628..55102646,+!p2@ONECUT2!1.06!10.51!ONECUT2;;chrY:21906594..21906622,-!p1@KDM5D!1.06!10.51!KDM5D;;chr17:41277372..41277418,-!p1@BRCA1!1.05!37.21!BRCA1;;chr2:175199697..175199706,+!p2@SP9!1.05!10.34!SP9;;chr20:42295713..42295738,+!p2@MYBL2!1.04!59.06!MYBL2;;chr1:167298300..167298319,+!p2@POU2F1!1.04!10.01!POU2F1;;chr2:200322229..200322251,-!p3@SATB2!1.04!9.84!SATB2;;chr17:79881332..79881348,-!p3@MAFG!1.03!14.18!MAFG;;chr16:54320617..54320643,-!p3@IRX3!1.03!12.68!IRX3;;chr17:48072574..48072597,-!p1@DLX3!1.02!9.51!DLX3;;chr7:50344251..50344288,+!p3@IKZF1!1.01!9.18!IKZF1;;chr2:100759037..100759058,-!p2@AFF3!1.00!9.01!AFF3;;chr13:72441074..72441172,-!p2@DACH1!0.99!8.84!DACH1;;chr1:167298384..167298412,+!p3@POU2F1!0.99!8.68!POU2F1;;chr1:40627038..40627071,+!p1@RLF!0.98!113.96!RLF;;chr15:57511609..57511651,+!p2@TCF12!0.98!14.52!TCF12;;chr11:128563948..128564003,+!p1@FLI1!0.97!103.78!FLI1;;chr19:13213662..13213686,-!p1@LYL1!0.96!12.18!LYL1;;chr1:156470494..156470505,-!p3@MEF2D!0.96!12.01!MEF2D;;chr11:47400032..47400043,-!p5@SPI1!0.96!8.18!SPI1;;chr16:54320158..54320200,-!p5@IRX3!0.95!11.68!IRX3;;chr10:135044190..135044229,+!p3@UTF1!0.95!8.01!UTF1;;chr7:27239703..27239715,-!p1@HOXA13!0.95!8.01!HOXA13;;chr9:1050331..1050363,+!p1@DMRT2!0.95!8.01!DMRT2;;chr1:92949505..92949543,-!p5@GFI1!0.95!7.84!GFI1;;chr16:54320675..54320715,-!p1@IRX3!0.93!16.85!IRX3;;chr2:185463247..185463263,+!p1@ZNF804A!0.93!13.51!ZNF804A;;chr3:18467290..18467311,-!p8@SATB1!0.93!7.51!SATB1;;chr16:54320280..54320291,-!p9@IRX3!0.93!7.51!IRX3;;chr1:41157266..41157314,+!p3@NFYC!0.92!64.90!NFYC;;chr7:64838786..64838809,+!p2@ZNF92!0.92!43.21!ZNF92;;chr12:54694758..54694805,-!p1@NFE2!0.92!8.84!NFE2;;chr19:13213954..13214021,-!p4@LYL1!0.92!7.34!LYL1;;chr2:145277882..145277967,-!p3@ZEB2!0.90!12.35!ZEB2;;chr20:21378152..21378169,-!p1@NKX2-4!0.90!7.01!NKX2-4;;chr1:247171347..247171366,-!p2@ZNF695!0.89!12.68!ZNF695;;chrX:66763856..66763896,+!p1@AR!0.89!10.01!AR;;chr19:23299814..23299844,+!p1@ZNF730!0.89!8.34!ZNF730;;chr2:200320768..200320800,-!p4@SATB2!0.89!6.67!SATB2;;chr19:20011744..20011770,+!p1@ZNF93!0.88!26.70!ZNF93;;chr19:22605097..22605121,-!p2@ZNF98!0.88!6.51!ZNF98;;chr19:50922187..50922204,+!p1@SPIB!0.88!6.51!SPIB;;chr21:34442439..34442455,+!p1@OLIG1!0.88!6.51!OLIG1;;chr19:22817119..22817145,+!p1@ZNF492!0.87!11.01!ZNF492;;chr2:145275947..145275981,-!p10@ZEB2!0.87!6.34!ZEB2;;chr7:19157248..19157268,-!p1@TWIST1!0.86!18.19!TWIST1;;chr6:45390300..45390335,+!p4@RUNX2!0.86!10.01!RUNX2;;chr16:54320101..54320125,-!p4@IRX3!0.86!9.18!IRX3;;chr16:54320322..54320343,-!p7@IRX3!0.85!6.01!IRX3;;chr2:100759010..100759035,-!p1@AFF3!0.85!6.01!AFF3;;chr21:36421535..36421610,-!p2@RUNX1!0.84!22.52!RUNX1;;chr6:45390269..45390298,+!p5@RUNX2!0.84!10.18!RUNX2;;chr7:35293685..35293718,-!p1@TBX20!0.84!5.84!TBX20;;chrY:2803415..2803468,+!p1@ZFY!0.84!5.84!ZFY;;chr19:22605136..22605154,-!p1@ZNF98!0.84!5.84!ZNF98;;chr12:54694807..54694832,-!p3@NFE2!0.84!5.84!NFE2;;chr13:100623375..100623425,-!p1@ZIC5!0.84!5.84!ZIC5;;chr5:88179017..88179046,-!p2@MEF2C!0.83!24.86!MEF2C;;chr6:144385698..144385742,-!p2@PLAGL1!0.83!7.17!PLAGL1;;chr7:64363638..64363667,+!p1@ZNF273!0.82!30.20!ZNF273;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.82!27.53!TAL1;;chr3:157823517..157823562,-!p1@SHOX2!0.82!6.01!SHOX2;;chr1:167298425..167298440,+!p8@POU2F1!0.82!5.67!POU2F1;;chr5:71803177..71803255,-!p1@ZNF366!0.82!5.67!ZNF366;;chr7:113726226..113726245,+!p3@FOXP2!0.82!5.67!FOXP2;;chr7:27239740..27239759,-!p2@HOXA13!0.82!5.67!HOXA13;;chr11:44331576..44331650,-!p1@ALX4!0.82!5.67!ALX4;;chr11:47400045..47400060,-!p6@SPI1!0.82!5.67!SPI1;;chr13:100634031..100634045,+!p1@ZIC2!0.82!5.67!ZIC2;;chr1:156460402..156460417,-!p22@MEF2D!0.81!5.51!MEF2D;;chr3:71630980..71631110,-!p3@FOXP1!0.80!19.86!FOXP1;;chr19:13213704..13213726,-!p3@LYL1!0.80!7.17!LYL1;;chr1:41157641..41157665,+!p7@NFYC!0.80!7.01!NFYC;;chr18:22804637..22804660,-!p10@ZNF521!0.80!5.34!ZNF521;;chr5:122424918..122424944,+!p1@PRDM6!0.80!5.34!PRDM6;;chr2:200325204..200325243,-!p7@SATB2!0.80!5.34!SATB2;;chr2:200322711..200322722,-!p10@SATB2!0.79!5.17!SATB2;;chr13:41593392..41593403,-!p7@ELF1!0.79!5.17!ELF1;;chr7:114054885..114054910,+!p4@FOXP2!0.79!5.17!FOXP2;;chr9:126774018..126774055,+!p1@LHX2!0.78!5.01!LHX2;;chr1:43148059..43148108,+!p1@YBX1!0.77!342.87!YBX1;;chr1:45805872..45805900,+!p2@TOE1!0.77!12.68!TOE1;;chr1:40367530..40367597,-!p1@MYCL1!0.77!9.34!MYCL1;;chr10:22292591..22292606,-!p2@DNAJC1!0.77!8.34!DNAJC1;;chrY:21906761..21906810,-!p2@KDM5D!0.77!4.84!KDM5D;;chr18:22931979..22931992,-!p3@ZNF521!0.77!4.84!ZNF521;;chr19:3574330..3574393,+!p2@HMG20B!0.77!4.84!HMG20B;;chr2:145275982..145276003,-!p7@ZEB2!0.77!4.84!ZEB2;;chr6:135513595..135513617,+!p4@MYB!0.77!4.84!MYB;;chr19:45971246..45971265,+!p1@FOSB!0.76!97.61!FOSB;;chr1:41157671..41157695,+!p6@NFYC!0.76!7.01!NFYC;;chr1:221052994..221053008,+!p6@HLX!0.76!5.67!HLX;;chr11:19263160..19263176,-!p1@E2F8!0.75!5.51!E2F8;;chr1:40105347..40105358,-!p2@HEYL!0.75!4.67!HEYL;;chr2:60780607..60780624,-!p2@BCL11A!0.74!14.85!BCL11A;;chr1:41204530..41204541,+!p8@NFYC!0.74!5.51!NFYC;;chr16:88497018..88497035,+!p@chr16:88497018..88497035,+!0.74!4.50!ZNF469;;chr2:200322259..200322280,-!p5@SATB2!0.74!4.50!SATB2;;chr8:145669791..145669834,-!p1@TONSL!0.73!13.68!TONSL;;chr9:3525727..3525828,-!p2@RFX3!0.73!12.18!RFX3;;chr18:22932004..22932021,-!p2@ZNF521!0.73!4.34!ZNF521;;chr19:21950332..21950356,-!p2@ZNF100!0.72!9.68!ZNF100;;chr6:45390002..45390023,+!p6@RUNX2!0.72!7.84!RUNX2;;chr19:20011731..20011743,+!p3@ZNF93!0.72!5.67!ZNF93;;chr1:221052733..221052749,+!p2@HLX!0.72!5.67!HLX;;chr1:40105299..40105326,-!p1@HEYL!0.71!4.17!HEYL;;chr3:18480173..18480189,-!p6@SATB1!0.71!4.17!SATB1;;chr3:18487057..18487105,-!p4@SATB1!0.71!4.17!SATB1;;chr19:23433144..23433204,-!p1@ZNF724P!0.70!20.19!ZNF724P;;chr1:25256756..25256774,-!p1@RUNX3!0.70!8.18!RUNX3;;chr15:76629123..76629151,+!p1@ISL2!0.70!4.50!ISL2;;chr11:32457103..32457123,-!p3@WT1!0.70!4.00!WT1;;chr5:88120151..88120177,-!p6@MEF2C!0.70!4.00!MEF2C;;chr7:114054864..114054876,+!p11@FOXP2!0.70!4.00!FOXP2;;chr14:75745523..75745537,+!p1@FOS!0.69!537.42!FOS;;chr19:20011775..20011800,+!p2@ZNF93!0.69!7.51!ZNF93;;chrX:66763815..66763854,+!p2@AR!0.69!5.34!AR;;chr19:48774586..48774670,+!p1@ZNF114!0.69!5.01!ZNF114;;chr1:247267618..247267674,-!p1@ZNF669!0.68!34.20!ZNF669;;chr1:227751231..227751273,+!p1@ZNF678!0.68!27.70!ZNF678;;chr9:137217986..137218049,+!p3@RXRA!0.68!12.18!RXRA;;chr6:45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SRP1!0.21!69.41!SSRP1;;chr19:1863568..1863586,-!p1@KLF16!0.21!48.22!KLF16;;chr3:169491171..169491205,+!p1@MYNN!0.21!24.86!MYNN;;chr10:111967345..111967422,+!p1@MXI1!0.21!23.36!MXI1;;chr16:67226019..67226127,+!p1@E2F4!0.21!18.69!E2F4;;chr1:161015706..161015747,-!p1@USF1!0.21!16.85!USF1;;chr12:57916466..57916523,+!p2@MBD6!0.21!12.51!MBD6;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.21!9.01!SOX7;;chr1:150849174..150849200,-!p2@ARNT!0.21!8.84!ARNT;;chr12:46123464..46123512,+!p1@ARID2!0.21!7.68!ARID2;;chr6:43139041..43139094,+!p3@SRF!0.21!7.51!SRF;;chr6:35227282..35227330,+!p2@ZNF76!0.21!4.67!ZNF76;;chr5:43121607..43121649,+!p4@ZNF131!0.21!3.34!ZNF131;;chr7:55955139..55955190,+!p1@ZNF713,p2@MRPS17!0.21!3.00!ZNF713;;chr10:44101902..44101932,+!p2@ZNF485!0.21!2.17!ZNF485;;chr11:130184311..130184362,-!p4@ZBTB44!0.21!1.84!ZBTB44;;chr5:43067583..43067606,+!p7@ZNF131!0.21!1.33!ZNF131;;chr15:42783258..42783270,-!p4@ZFP106!0.21!1.17!ZFP106;;chr14:58765305..58765324,+!p4@ARID4A!0.21!1.00!ARID4A;;chr11:47279248..47279264,+!p3@NR1H3!0.21!0.83!NR1H3;;chr12:27485733..27485742,+!p5@ARNTL2!0.21!0.83!ARNTL2;;chr17:17726892..17726903,-!p6@SREBF1!0.21!0.83!SREBF1;;chr3:170076223..170076242,+!p6@SKIL!0.21!0.83!SKIL;;chr1:35658736..35658754,-!p1@SFPQ!0.20!523.57!SFPQ;;chr10:60145155..60145206,+!p1@TFAM!0.20!61.73!TFAM;;chr19:33864600..33864732,+!p1@CEBPG!0.20!39.38!CEBPG;;chr6:56954919..56955000,+!p1@ZNF451!0.20!28.36!ZNF451;;chr1:27022164..27022220,+!p2@ARID1A!0.20!9.84!ARID1A;;chr6:35227480..35227546,+!p1@ZNF76!0.20!8.68!ZNF76;;chr19:58361185..58361235,+!p2@ZNF587!0.20!7.01!ZNF587;;chr19:9434841..9434886,+!p1@ZNF559!0.20!6.51!ZNF559;;chr16:67063211..67063240,+!p2@CBFB!0.20!6.17!CBFB;;chr17:42297028..42297056,-!p3@UBTF!0.20!5.01!UBTF;;chr14:89883412..89883478,-!p3@FOXN3!0.20!3.84!FOXN3;;chr9:2017063..2017144,+!p4@SMARCA2!0.20!3.67!SMARCA2;;chr19:37958318..37958365,-!p2@ZNF569!0.20!3.00!ZNF569;;chr12:48298765..48298783,-!p2@VDR!0.20!2.17!VDR;;chr8:124286670..124286702,-!p3@ZHX1!0.20!1.67!ZHX1;;chr6:45390442..45390479,+!p8@RUNX2!0.20!1.33!RUNX2;;chr16:67596356..67596367,+!p5@CTCF!0.20!1.17!CTCF;;chr19:53324884..53324886,-!p1@ZNF28!0.20!1.17!ZNF28;;chr6:42419290..42419314,-!p5@TRERF1!0.20!1.00!TRERF1;;chr8:116681247..116681261,-!p8@TRPS1!0.20!1.00!TRPS1;;chr10:105110720..105110744,-!p3@PCGF6!0.20!1.00!PCGF6;;chr16:29817199..29817222,+!p17@MAZ!0.20!1.00!MAZ;;chr2:176033066..176033087,-!p2@ATF2!0.20!1.00!ATF2;;chr2:219524193..219524205,-!p3@ZNF142!0.20!0.83!ZNF142;;chr6:20402070..20402082,+!p5@E2F3!0.20!0.83!E2F3;;chr19:58193388..58193411,+!p2@ZNF551,p4@ZNF776!0.20!0.83!ZNF551;;chr17:41623259..41623278,-!p7@ETV4!0.20!0.83!ETV4;;chr18:53255839..53255854,-!p13@TCF4!0.20!0.83!TCF4;;chr2:187350973..187351072,+!p1@ZC3H15!0.19!120.63!ZC3H15;;chr2:74374995..74375055,-!p1@BOLA3!0.19!61.90!BOLA3;;chr19:11071685..11071798,+!p1@SMARCA4!0.19!39.21!SMARCA4;;chr14:103058948..103059005,+!p1@RCOR1!0.19!37.87!RCOR1;;chr2:208394658..208394692,+!p1@CREB1!0.19!33.04!CREB1;;chr2:174828545..174828644,-!p1@SP3!0.19!20.86!SP3;;chr1:67390665..67390698,+!p1@MIER1!0.19!18.85!MIER1;;chr6:155635583..155635644,-!p1@TFB1M!0.19!17.69!TFB1M;;chr6:7107939..7107993,+!p1@RREB1!0.19!16.02!RREB1;;chr20:61493117..61493187,-!p1@TCFL5!0.19!15.35!TCFL5;;chr14:65569244..65569264,-!p2@MAX!0.19!15.35!MAX;;chr8:146052918..146052975,+!p1@ZNF7!0.19!14.85!ZNF7;;chr10:105110831..105110885,-!p1@PCGF6!0.19!13.01!PCGF6;;chr19:53141584..53141625,-!p2@ZNF83!0.19!10.51!ZNF83;;chr9:104161123..104161205,+!p1@ZNF189!0.19!9.18!ZNF189;;
|sample_dev_stage=1 year old child
|ffid_belonging_in_development=CL:0000049,CL:0000134
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=1
|sample_ethnicity=J
|rna_rin=10
|rna_od260/230=1.473333333
|rna_od260/280=1.99
|sample_cell_type=monoblast
|sample_cell_line=THP-1
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=FREEZOME
|sample_disease=acute myeloid leukemia (FAB M5)
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=23.15984
|rna_concentration=1.05272
|sample_note=machine failed, remainder reloaded, low amount
|profile_hcage=CNhs10724,LSID691,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002087,CL:0002194,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
|sample_description=
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=106
|rna_catalog_number=
|rna_concentration=1.05272
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.473333333
|rna_od260/280=1.99
|rna_position=A9
|rna_rin=10
|rna_sample_type=total RNA
|rna_tube_id=106A9
|rna_weight_ug=23.15984
|sample_age=1
|sample_category=cell lines
|sample_cell_catalog=
|sample_cell_line=THP-1
|sample_cell_lot=
|sample_cell_type=monoblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=
|sample_description=
|sample_dev_stage=1 year old child
|sample_disease=acute myeloid leukemia (FAB M5)
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=FREEZOME
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.84454043192129e-278!GO:0043227;membrane-bound organelle;1.5868828921964e-252!GO:0043231;intracellular membrane-bound organelle;2.65238965819843e-252!GO:0043226;organelle;2.72954342505465e-238!GO:0043229;intracellular organelle;9.62064382650314e-238!GO:0044422;organelle part;4.49130985814731e-164!GO:0044446;intracellular organelle part;2.4518091042798e-162!GO:0005737;cytoplasm;1.93757022015081e-159!GO:0005634;nucleus;1.04581549699032e-129!GO:0044237;cellular metabolic process;1.21379852164508e-124!GO:0044238;primary metabolic process;2.40914038434285e-121!GO:0044444;cytoplasmic part;7.92752420466452e-119!GO:0032991;macromolecular complex;1.48452920079781e-116!GO:0043170;macromolecule metabolic process;6.53231539427971e-115!GO:0044428;nuclear part;5.13854396088273e-101!GO:0030529;ribonucleoprotein complex;1.19417054161725e-100!GO:0043233;organelle lumen;4.74146699869576e-90!GO:0031974;membrane-enclosed lumen;4.74146699869576e-90!GO:0003723;RNA binding;1.14348513921388e-89!GO:0043283;biopolymer metabolic process;2.1391564757368e-75!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.28599557690789e-73!GO:0005739;mitochondrion;7.46157615828247e-73!GO:0010467;gene expression;1.86721961543806e-69!GO:0006396;RNA processing;3.49438299441748e-63!GO:0031981;nuclear lumen;4.15547816200924e-58!GO:0043234;protein complex;4.15547816200924e-58!GO:0005515;protein binding;7.5753340902496e-57!GO:0006412;translation;6.92695881144246e-56!GO:0005840;ribosome;2.77360325229436e-55!GO:0044429;mitochondrial part;5.20598276456152e-52!GO:0003676;nucleic acid binding;1.45264299404658e-51!GO:0016071;mRNA metabolic process;7.20212670790459e-50!GO:0006259;DNA metabolic process;2.63288630531284e-49!GO:0003735;structural constituent of ribosome;1.20924183938393e-48!GO:0031967;organelle envelope;1.69674278928955e-48!GO:0031975;envelope;4.65330650379376e-48!GO:0031090;organelle membrane;2.88158033226506e-46!GO:0019538;protein metabolic process;3.92229252876441e-46!GO:0008380;RNA splicing;6.46040356691682e-45!GO:0016043;cellular component organization and biogenesis;6.51622527217011e-45!GO:0033036;macromolecule localization;2.02917921680235e-44!GO:0006397;mRNA processing;3.95882457720677e-44!GO:0009058;biosynthetic process;5.10377365596631e-44!GO:0044249;cellular biosynthetic process;1.35044474108814e-43!GO:0015031;protein transport;1.6394039646991e-42!GO:0009059;macromolecule biosynthetic process;4.42171449655649e-42!GO:0044267;cellular protein metabolic process;6.07262904881683e-42!GO:0044260;cellular macromolecule metabolic process;6.96985824991366e-42!GO:0033279;ribosomal subunit;3.43473681451182e-41!GO:0045184;establishment of protein localization;1.40712012957625e-40!GO:0006996;organelle organization and biogenesis;4.42891821875081e-40!GO:0008104;protein localization;1.62883137849465e-39!GO:0016070;RNA metabolic process;3.85465751169443e-37!GO:0065003;macromolecular complex assembly;5.6440547288162e-37!GO:0005829;cytosol;7.81148323758722e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.42586943043331e-37!GO:0005654;nucleoplasm;1.63906531344875e-36!GO:0007049;cell cycle;5.42524421016375e-36!GO:0046907;intracellular transport;4.74605042052949e-35!GO:0043228;non-membrane-bound organelle;4.79932517085007e-35!GO:0043232;intracellular non-membrane-bound organelle;4.79932517085007e-35!GO:0005681;spliceosome;2.2993802243418e-33!GO:0005740;mitochondrial envelope;1.89297992658355e-32!GO:0022607;cellular component assembly;6.69459581270311e-32!GO:0006974;response to DNA damage stimulus;1.85688140603663e-30!GO:0005694;chromosome;2.50190827431521e-30!GO:0019866;organelle inner membrane;4.20319181544244e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.33332941473056e-30!GO:0031966;mitochondrial membrane;4.47223410028191e-30!GO:0006886;intracellular protein transport;2.42136451709345e-29!GO:0044451;nucleoplasm part;4.21754583097055e-29!GO:0000166;nucleotide binding;1.17942814899887e-28!GO:0005743;mitochondrial inner membrane;5.92332869236122e-28!GO:0022402;cell cycle process;6.61740600239807e-28!GO:0051649;establishment of cellular localization;1.47459694456551e-27!GO:0006281;DNA repair;4.063788002343e-27!GO:0000278;mitotic cell cycle;5.90684271673592e-27!GO:0051641;cellular localization;8.19054838666471e-27!GO:0044427;chromosomal part;5.49647235510863e-26!GO:0044445;cytosolic part;7.64704175209573e-26!GO:0051276;chromosome organization and biogenesis;2.79625004076502e-24!GO:0006119;oxidative phosphorylation;4.17811810000484e-24!GO:0022403;cell cycle phase;6.50839127043539e-23!GO:0031980;mitochondrial lumen;8.34961561014019e-23!GO:0005759;mitochondrial matrix;8.34961561014019e-23!GO:0000087;M phase of mitotic cell cycle;2.73362460760419e-22!GO:0007067;mitosis;9.20086051344157e-22!GO:0015935;small ribosomal subunit;1.56344023080922e-21!GO:0051301;cell division;2.1434893315236e-21!GO:0044455;mitochondrial membrane part;2.63442050539415e-21!GO:0006457;protein folding;6.50716987110574e-21!GO:0044265;cellular macromolecule catabolic process;6.99603050678181e-21!GO:0022618;protein-RNA complex assembly;8.23645302688455e-21!GO:0016874;ligase activity;8.23645302688455e-21!GO:0015934;large ribosomal subunit;1.01637067122371e-20!GO:0005730;nucleolus;1.24182554631167e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.0693821982168e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;2.26345254557594e-20!GO:0009719;response to endogenous stimulus;2.48521804789867e-20!GO:0016462;pyrophosphatase activity;3.95014059262041e-20!GO:0017111;nucleoside-triphosphatase activity;1.06954839442318e-19!GO:0000279;M phase;1.86047873886675e-19!GO:0006260;DNA replication;3.08496647737524e-19!GO:0032553;ribonucleotide binding;1.10422601958264e-18!GO:0032555;purine ribonucleotide binding;1.10422601958264e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;1.14023874228208e-18!GO:0017076;purine nucleotide binding;1.9037562707481e-18!GO:0043285;biopolymer catabolic process;3.87754153908127e-18!GO:0006323;DNA packaging;5.59848686368726e-18!GO:0005746;mitochondrial respiratory chain;5.78923228818139e-18!GO:0048770;pigment granule;7.38160246546352e-18!GO:0042470;melanosome;7.38160246546352e-18!GO:0006512;ubiquitin cycle;1.15138637178615e-17!GO:0051186;cofactor metabolic process;1.73044279477813e-17!GO:0009057;macromolecule catabolic process;2.64854725098725e-17!GO:0008135;translation factor activity, nucleic acid binding;2.767951452498e-17!GO:0044248;cellular catabolic process;3.75060919905164e-17!GO:0012505;endomembrane system;4.80156394343915e-17!GO:0005524;ATP binding;4.88867428507759e-17!GO:0032559;adenyl ribonucleotide binding;8.32807803277528e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;8.62922494135454e-17!GO:0042254;ribosome biogenesis and assembly;9.88515759589474e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.21457258512133e-16!GO:0019941;modification-dependent protein catabolic process;1.29493172047307e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.29493172047307e-16!GO:0005635;nuclear envelope;1.33895078821982e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.95750785023218e-16!GO:0030554;adenyl nucleotide binding;2.24424999779703e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.30487164806394e-16!GO:0044257;cellular protein catabolic process;2.64269667119373e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.78439972202242e-16!GO:0000398;nuclear mRNA splicing, via spliceosome;4.6682955235642e-16!GO:0000375;RNA splicing, via transesterification reactions;4.6682955235642e-16!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.6682955235642e-16!GO:0006605;protein targeting;4.81548148708827e-16!GO:0050136;NADH dehydrogenase (quinone) activity;5.56693822788711e-16!GO:0003954;NADH dehydrogenase activity;5.56693822788711e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.56693822788711e-16!GO:0005761;mitochondrial ribosome;1.17538786801814e-15!GO:0000313;organellar ribosome;1.17538786801814e-15!GO:0008134;transcription factor binding;1.98355705166767e-15!GO:0044453;nuclear membrane part;2.51923845864113e-15!GO:0050657;nucleic acid transport;2.54477580064912e-15!GO:0051236;establishment of RNA localization;2.54477580064912e-15!GO:0050658;RNA transport;2.54477580064912e-15!GO:0031965;nuclear membrane;2.60195999237825e-15!GO:0006403;RNA localization;4.43486494480206e-15!GO:0006732;coenzyme metabolic process;6.35197877780177e-15!GO:0005643;nuclear pore;1.65080942424541e-14!GO:0006913;nucleocytoplasmic transport;1.72297827293806e-14!GO:0016887;ATPase activity;1.93163586321104e-14!GO:0016604;nuclear body;1.97039945137495e-14!GO:0042623;ATPase activity, coupled;2.34761834454432e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.65472964317726e-14!GO:0042773;ATP synthesis coupled electron transport;2.65472964317726e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.81427493452994e-14!GO:0051082;unfolded protein binding;3.3522564420469e-14!GO:0051169;nuclear transport;4.36750486042149e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.3673818118551e-14!GO:0045271;respiratory chain complex I;5.3673818118551e-14!GO:0005747;mitochondrial respiratory chain complex I;5.3673818118551e-14!GO:0043412;biopolymer modification;8.28416515251042e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.44878659514691e-13!GO:0051726;regulation of cell cycle;1.60959265209337e-13!GO:0003743;translation initiation factor activity;1.69930804282339e-13!GO:0000074;regulation of progression through cell cycle;2.10088744179534e-13!GO:0006413;translational initiation;2.44533858943345e-13!GO:0030163;protein catabolic process;2.7494029953785e-13!GO:0051028;mRNA transport;2.87497264767925e-13!GO:0044432;endoplasmic reticulum part;3.15931541798545e-13!GO:0000785;chromatin;5.23752623331435e-13!GO:0006333;chromatin assembly or disassembly;5.49133378559962e-13!GO:0006399;tRNA metabolic process;9.5134341115545e-13!GO:0004386;helicase activity;1.23481494869029e-12!GO:0016568;chromatin modification;1.49684941897983e-12!GO:0006366;transcription from RNA polymerase II promoter;2.71656877445562e-12!GO:0046930;pore complex;3.64433739950815e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.80416957309758e-12!GO:0065004;protein-DNA complex assembly;3.81185311167392e-12!GO:0019222;regulation of metabolic process;4.30742408650965e-12!GO:0065002;intracellular protein transport across a membrane;4.46152768475745e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.84597382755249e-12!GO:0000775;chromosome, pericentric region;8.52901047995235e-12!GO:0050794;regulation of cellular process;9.05634981251149e-12!GO:0016607;nuclear speck;1.28113599128082e-11!GO:0006364;rRNA processing;1.43533791386857e-11!GO:0009259;ribonucleotide metabolic process;1.45680655098433e-11!GO:0006464;protein modification process;1.60411275969756e-11!GO:0006446;regulation of translational initiation;1.72317334056182e-11!GO:0016072;rRNA metabolic process;2.70399951674897e-11!GO:0005783;endoplasmic reticulum;4.43094191171335e-11!GO:0006163;purine nucleotide metabolic process;4.6201987635406e-11!GO:0008026;ATP-dependent helicase activity;5.78331493801255e-11!GO:0016192;vesicle-mediated transport;6.87486067867383e-11!GO:0012501;programmed cell death;7.32851547706871e-11!GO:0051188;cofactor biosynthetic process;7.35153542900022e-11!GO:0006915;apoptosis;8.00735793485221e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.05105649583333e-10!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.10171118643985e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.21850108553938e-10!GO:0009260;ribonucleotide biosynthetic process;1.51790997837893e-10!GO:0048193;Golgi vesicle transport;1.62371837348631e-10!GO:0016779;nucleotidyltransferase activity;1.85157793854814e-10!GO:0006164;purine nucleotide biosynthetic process;2.16936818650381e-10!GO:0009055;electron carrier activity;2.2596418140891e-10!GO:0009150;purine ribonucleotide metabolic process;3.34871341111407e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.49491115229575e-10!GO:0017038;protein import;3.71002748855717e-10!GO:0003712;transcription cofactor activity;4.06155263774148e-10!GO:0043687;post-translational protein modification;5.71838051324114e-10!GO:0009056;catabolic process;6.08144566502789e-10!GO:0005789;endoplasmic reticulum membrane;6.64237826301178e-10!GO:0043566;structure-specific DNA binding;6.7243207956308e-10!GO:0008639;small protein conjugating enzyme activity;7.60347806657591e-10!GO:0031323;regulation of cellular metabolic process;9.62963286242189e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.04452308045987e-09!GO:0006261;DNA-dependent DNA replication;1.15192598820954e-09!GO:0008219;cell death;1.22269658012189e-09!GO:0016265;death;1.22269658012189e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.55174490280056e-09!GO:0015630;microtubule cytoskeleton;1.55583999389495e-09!GO:0009060;aerobic respiration;1.56817442509891e-09!GO:0006334;nucleosome assembly;1.62441571536025e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.82538818136115e-09!GO:0004812;aminoacyl-tRNA ligase activity;1.82538818136115e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.82538818136115e-09!GO:0004842;ubiquitin-protein ligase activity;1.8523773450026e-09!GO:0005819;spindle;1.85352809189432e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.01595135436795e-09!GO:0030532;small nuclear ribonucleoprotein complex;2.26457278785318e-09!GO:0006461;protein complex assembly;2.29492639459775e-09!GO:0009108;coenzyme biosynthetic process;2.32713310787072e-09!GO:0009141;nucleoside triphosphate metabolic process;2.40196257189729e-09!GO:0019787;small conjugating protein ligase activity;2.48312599384912e-09!GO:0008565;protein transporter activity;3.18036112366679e-09!GO:0043038;amino acid activation;3.23265660655641e-09!GO:0006418;tRNA aminoacylation for protein translation;3.23265660655641e-09!GO:0043039;tRNA aminoacylation;3.23265660655641e-09!GO:0009142;nucleoside triphosphate biosynthetic process;3.38803486563793e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.38803486563793e-09!GO:0031497;chromatin assembly;3.77179029198859e-09!GO:0015986;ATP synthesis coupled proton transport;3.9458415234826e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.9458415234826e-09!GO:0003697;single-stranded DNA binding;4.12670994982951e-09!GO:0016787;hydrolase activity;4.29237156520291e-09!GO:0016881;acid-amino acid ligase activity;5.32070221175109e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.65390881577749e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.65390881577749e-09!GO:0006350;transcription;7.56127199711868e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.03872346406708e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.03872346406708e-08!GO:0045333;cellular respiration;1.65511239647475e-08!GO:0019829;cation-transporting ATPase activity;2.66634834909739e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.93136450671407e-08!GO:0051329;interphase of mitotic cell cycle;3.02668880099381e-08!GO:0046034;ATP metabolic process;4.34222334843867e-08!GO:0005657;replication fork;4.51186967618232e-08!GO:0051325;interphase;4.97004112778125e-08!GO:0007051;spindle organization and biogenesis;5.22360498435709e-08!GO:0006754;ATP biosynthetic process;6.03040799962939e-08!GO:0006753;nucleoside phosphate metabolic process;6.03040799962939e-08!GO:0050789;regulation of biological process;6.43007818724028e-08!GO:0005839;proteasome core complex (sensu Eukaryota);7.80737639057503e-08!GO:0010468;regulation of gene expression;7.80737639057503e-08!GO:0015078;hydrogen ion transmembrane transporter activity;8.96575485095867e-08!GO:0005813;centrosome;9.15968619072279e-08!GO:0006099;tricarboxylic acid cycle;1.02734708114825e-07!GO:0046356;acetyl-CoA catabolic process;1.02734708114825e-07!GO:0000075;cell cycle checkpoint;1.0458006713721e-07!GO:0005667;transcription factor complex;1.1805886413627e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.18483948868137e-07!GO:0005815;microtubule organizing center;1.31174003551564e-07!GO:0051170;nuclear import;1.46410128444114e-07!GO:0003677;DNA binding;1.60711797269175e-07!GO:0032446;protein modification by small protein conjugation;1.72311826228099e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.77735604569925e-07!GO:0005794;Golgi apparatus;2.36104795395307e-07!GO:0006084;acetyl-CoA metabolic process;2.48010903757576e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.66452936881701e-07!GO:0016567;protein ubiquitination;2.71888663354062e-07!GO:0003713;transcription coactivator activity;3.16160794506534e-07!GO:0004298;threonine endopeptidase activity;3.22443380636473e-07!GO:0051246;regulation of protein metabolic process;3.37677188927751e-07!GO:0016740;transferase activity;4.53947733030989e-07!GO:0005793;ER-Golgi intermediate compartment;4.82090215590366e-07!GO:0006606;protein import into nucleus;5.10193826613556e-07!GO:0000245;spliceosome assembly;5.72008249594333e-07!GO:0007059;chromosome segregation;5.82462658783115e-07!GO:0042981;regulation of apoptosis;6.07850094368572e-07!GO:0009109;coenzyme catabolic process;6.38402186299144e-07!GO:0007005;mitochondrion organization and biogenesis;6.67816521562477e-07!GO:0009117;nucleotide metabolic process;7.257594866287e-07!GO:0045259;proton-transporting ATP synthase complex;7.92634863055268e-07!GO:0006752;group transfer coenzyme metabolic process;9.28628203600762e-07!GO:0043067;regulation of programmed cell death;9.37055290084352e-07!GO:0051168;nuclear export;1.01334323523763e-06!GO:0005773;vacuole;1.19914735106746e-06!GO:0006302;double-strand break repair;1.27208330161185e-06!GO:0005768;endosome;1.33537248511424e-06!GO:0000151;ubiquitin ligase complex;1.43796044398618e-06!GO:0030120;vesicle coat;1.43796044398618e-06!GO:0030662;coated vesicle membrane;1.43796044398618e-06!GO:0043623;cellular protein complex assembly;1.46125573825626e-06!GO:0032774;RNA biosynthetic process;1.52052654027802e-06!GO:0016363;nuclear matrix;1.55167745880399e-06!GO:0006310;DNA recombination;1.59612498180373e-06!GO:0003899;DNA-directed RNA polymerase activity;1.59612498180373e-06!GO:0008094;DNA-dependent ATPase activity;1.62469798576809e-06!GO:0016563;transcription activator activity;1.74946281970014e-06!GO:0048475;coated membrane;1.77132732091413e-06!GO:0030117;membrane coat;1.77132732091413e-06!GO:0000323;lytic vacuole;2.03872744708905e-06!GO:0005764;lysosome;2.03872744708905e-06!GO:0006351;transcription, DNA-dependent;2.2385296430861e-06!GO:0051187;cofactor catabolic process;2.27059229932513e-06!GO:0031324;negative regulation of cellular metabolic process;2.29188733356785e-06!GO:0006401;RNA catabolic process;3.39164486328092e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.92817123867098e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.19779501885538e-06!GO:0006793;phosphorus metabolic process;4.19779501885538e-06!GO:0006796;phosphate metabolic process;4.19779501885538e-06!GO:0006613;cotranslational protein targeting to membrane;4.19779501885538e-06!GO:0051427;hormone receptor binding;4.50527018182981e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.69829203378115e-06!GO:0000776;kinetochore;5.13500555431984e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.45660029640201e-06!GO:0005762;mitochondrial large ribosomal subunit;8.41394582323369e-06!GO:0000315;organellar large ribosomal subunit;8.41394582323369e-06!GO:0035257;nuclear hormone receptor binding;1.00252578087326e-05!GO:0003690;double-stranded DNA binding;1.14102154660668e-05!GO:0048523;negative regulation of cellular process;1.16659819250154e-05!GO:0003724;RNA helicase activity;1.28652011954377e-05!GO:0045449;regulation of transcription;1.31722997013828e-05!GO:0007088;regulation of mitosis;1.48842920525949e-05!GO:0006612;protein targeting to membrane;2.44484984657245e-05!GO:0009892;negative regulation of metabolic process;2.81944559121747e-05!GO:0016564;transcription repressor activity;2.89049139275777e-05!GO:0016853;isomerase activity;3.02047471695102e-05!GO:0043021;ribonucleoprotein binding;3.05829354990023e-05!GO:0016741;transferase activity, transferring one-carbon groups;3.53958960403786e-05!GO:0016491;oxidoreductase activity;3.95451520979429e-05!GO:0003729;mRNA binding;4.16423395468522e-05!GO:0044452;nucleolar part;4.29637006100891e-05!GO:0000786;nucleosome;4.47838337510789e-05!GO:0009165;nucleotide biosynthetic process;4.70030450808648e-05!GO:0008168;methyltransferase activity;4.8071806086956e-05!GO:0004518;nuclease activity;4.98449389121142e-05!GO:0045786;negative regulation of progression through cell cycle;5.07876961791547e-05!GO:0005798;Golgi-associated vesicle;5.31725726110589e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;6.07081031825588e-05!GO:0016481;negative regulation of transcription;6.23157397291694e-05!GO:0000228;nuclear chromosome;6.6542202798413e-05!GO:0005788;endoplasmic reticulum lumen;7.62344970341412e-05!GO:0008033;tRNA processing;7.80002490587496e-05!GO:0007093;mitotic cell cycle checkpoint;8.46017705951641e-05!GO:0031988;membrane-bound vesicle;8.52791883112648e-05!GO:0008654;phospholipid biosynthetic process;8.76719403991577e-05!GO:0006383;transcription from RNA polymerase III promoter;9.23379724512859e-05!GO:0003684;damaged DNA binding;9.24121768457252e-05!GO:0003682;chromatin binding;0.00010108216313195!GO:0006414;translational elongation;0.000110997798991734!GO:0000059;protein import into nucleus, docking;0.000114071115496704!GO:0004527;exonuclease activity;0.000114071115496704!GO:0044440;endosomal part;0.000115992279099673!GO:0010008;endosome membrane;0.000115992279099673!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000125976392804107!GO:0030880;RNA polymerase complex;0.00013218094806349!GO:0006405;RNA export from nucleus;0.000134873404657181!GO:0016310;phosphorylation;0.000135335123567388!GO:0016859;cis-trans isomerase activity;0.000143150134752782!GO:0005885;Arp2/3 protein complex;0.000158131384810085!GO:0000314;organellar small ribosomal subunit;0.000163291376385557!GO:0005763;mitochondrial small ribosomal subunit;0.000163291376385557!GO:0048519;negative regulation of biological process;0.000163291376385557!GO:0016023;cytoplasmic membrane-bound vesicle;0.000164478827537179!GO:0003678;DNA helicase activity;0.000166887936400298!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000167679699611932!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000191224153639139!GO:0007052;mitotic spindle organization and biogenesis;0.000204346688092101!GO:0008186;RNA-dependent ATPase activity;0.000220365482046618!GO:0043681;protein import into mitochondrion;0.000222479192847853!GO:0006355;regulation of transcription, DNA-dependent;0.00022484713334584!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00022785475953209!GO:0015992;proton transport;0.000240749396998205!GO:0046489;phosphoinositide biosynthetic process;0.000241420758708529!GO:0051052;regulation of DNA metabolic process;0.000248916919460059!GO:0032508;DNA duplex unwinding;0.000252199467077248!GO:0032392;DNA geometric change;0.000252199467077248!GO:0005525;GTP binding;0.000260765247075248!GO:0006818;hydrogen transport;0.000264385854527909!GO:0000082;G1/S transition of mitotic cell cycle;0.000268106160329122!GO:0006402;mRNA catabolic process;0.000279393875157765!GO:0006950;response to stress;0.000281299103288142!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000288676836163243!GO:0000428;DNA-directed RNA polymerase complex;0.000288676836163243!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000301583783772336!GO:0065007;biological regulation;0.000336961918673571!GO:0003702;RNA polymerase II transcription factor activity;0.00033923916517714!GO:0006268;DNA unwinding during replication;0.00034759065430393!GO:0031982;vesicle;0.00035765125177401!GO:0006091;generation of precursor metabolites and energy;0.000394291318320373!GO:0016251;general RNA polymerase II transcription factor activity;0.000396436921164723!GO:0030384;phosphoinositide metabolic process;0.000400220501459318!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000419990249957519!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000424663360222596!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000439849628827672!GO:0043069;negative regulation of programmed cell death;0.000442254619982506!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000476582455864639!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000477868862320395!GO:0030867;rough endoplasmic reticulum membrane;0.000487389769855946!GO:0006626;protein targeting to mitochondrion;0.000489074787860474!GO:0031072;heat shock protein binding;0.000489735598913761!GO:0045454;cell redox homeostasis;0.000496352149310372!GO:0043066;negative regulation of apoptosis;0.000545237767460982!GO:0003924;GTPase activity;0.000567490718395397!GO:0043596;nuclear replication fork;0.000584631308246078!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00061464685625107!GO:0004004;ATP-dependent RNA helicase activity;0.000637917972519168!GO:0051252;regulation of RNA metabolic process;0.000679623553561854!GO:0019899;enzyme binding;0.000691199971777811!GO:0005769;early endosome;0.000703833190955877!GO:0065009;regulation of a molecular function;0.000726536987280231!GO:0006839;mitochondrial transport;0.000747990038173411!GO:0005741;mitochondrial outer membrane;0.000750679125415409!GO:0019752;carboxylic acid metabolic process;0.000756548362938177!GO:0031968;organelle outer membrane;0.000775269375194777!GO:0006352;transcription initiation;0.000792066060450314!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000792424935197089!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000792424935197089!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000792424935197089!GO:0005770;late endosome;0.000801646592091769!GO:0015980;energy derivation by oxidation of organic compounds;0.000819753823459358!GO:0006082;organic acid metabolic process;0.000829879995594381!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000876219871883117!GO:0046474;glycerophospholipid biosynthetic process;0.000876219871883117!GO:0031410;cytoplasmic vesicle;0.000878012233559915!GO:0006916;anti-apoptosis;0.000954976559633977!GO:0031124;mRNA 3'-end processing;0.00101907673808163!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00103506659408723!GO:0015399;primary active transmembrane transporter activity;0.00103506659408723!GO:0030658;transport vesicle membrane;0.00103506659408723!GO:0000922;spindle pole;0.00104571104062634!GO:0044431;Golgi apparatus part;0.0010593442584489!GO:0048500;signal recognition particle;0.00106214529644554!GO:0000819;sister chromatid segregation;0.00108836680952708!GO:0045045;secretory pathway;0.0010917623064232!GO:0005684;U2-dependent spliceosome;0.00115959563822961!GO:0019867;outer membrane;0.00116035861045804!GO:0007006;mitochondrial membrane organization and biogenesis;0.00121684779480756!GO:0007017;microtubule-based process;0.00127512433801284!GO:0006270;DNA replication initiation;0.00137364078086732!GO:0051920;peroxiredoxin activity;0.00143238205167847!GO:0008312;7S RNA binding;0.00145796359547744!GO:0000910;cytokinesis;0.00150404918121096!GO:0032940;secretion by cell;0.00153452676066598!GO:0000070;mitotic sister chromatid segregation;0.00158054410922605!GO:0042393;histone binding;0.00158054410922605!GO:0033367;protein localization in mast cell secretory granule;0.00158054410922605!GO:0033365;protein localization in organelle;0.00158054410922605!GO:0033371;T cell secretory granule organization and biogenesis;0.00158054410922605!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00158054410922605!GO:0033375;protease localization in T cell secretory granule;0.00158054410922605!GO:0042629;mast cell granule;0.00158054410922605!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00158054410922605!GO:0033364;mast cell secretory granule organization and biogenesis;0.00158054410922605!GO:0033380;granzyme B localization in T cell secretory granule;0.00158054410922605!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00158054410922605!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00158054410922605!GO:0033368;protease localization in mast cell secretory granule;0.00158054410922605!GO:0033366;protein localization in secretory granule;0.00158054410922605!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00158054410922605!GO:0033374;protein localization in T cell secretory granule;0.00158054410922605!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00179658014820722!GO:0006611;protein export from nucleus;0.0018263951704128!GO:0005876;spindle microtubule;0.00185943960514336!GO:0009112;nucleobase metabolic process;0.00186129701549186!GO:0031252;leading edge;0.00195496704579558!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00201039138858017!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00201039138858017!GO:0030663;COPI coated vesicle membrane;0.0020571133388215!GO:0030126;COPI vesicle coat;0.0020571133388215!GO:0043601;nuclear replisome;0.00212045744157292!GO:0030894;replisome;0.00212045744157292!GO:0006650;glycerophospholipid metabolic process;0.00216874156915351!GO:0031570;DNA integrity checkpoint;0.00216874156915351!GO:0005048;signal sequence binding;0.00216874156915351!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00225826421488389!GO:0045047;protein targeting to ER;0.00225826421488389!GO:0000792;heterochromatin;0.00229446560632373!GO:0019843;rRNA binding;0.00233878492354291!GO:0000725;recombinational repair;0.00234061106718184!GO:0000724;double-strand break repair via homologous recombination;0.00234061106718184!GO:0032200;telomere organization and biogenesis;0.00235268627052728!GO:0000723;telomere maintenance;0.00235268627052728!GO:0005874;microtubule;0.00242885854191252!GO:0043284;biopolymer biosynthetic process;0.00256548350944886!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00261707719022952!GO:0043065;positive regulation of apoptosis;0.00261707719022952!GO:0046467;membrane lipid biosynthetic process;0.00261707719022952!GO:0003714;transcription corepressor activity;0.00272492042157037!GO:0046483;heterocycle metabolic process;0.00284893215869509!GO:0032561;guanyl ribonucleotide binding;0.00291391325115863!GO:0019001;guanyl nucleotide binding;0.00291391325115863!GO:0008632;apoptotic program;0.00296380545371658!GO:0051087;chaperone binding;0.00296487219333672!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00297974220230585!GO:0006506;GPI anchor biosynthetic process;0.00306631863152114!GO:0030660;Golgi-associated vesicle membrane;0.00307032533033185!GO:0000049;tRNA binding;0.00323167064222244!GO:0000178;exosome (RNase complex);0.00324534611087683!GO:0006497;protein amino acid lipidation;0.00332689040812022!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00334010598146514!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0033882021072507!GO:0000152;nuclear ubiquitin ligase complex;0.00344840766085618!GO:0043068;positive regulation of programmed cell death;0.00356747559640401!GO:0003746;translation elongation factor activity;0.00359717854303529!GO:0005758;mitochondrial intermembrane space;0.00368253390029387!GO:0008408;3'-5' exonuclease activity;0.00393697865608141!GO:0044454;nuclear chromosome part;0.00399585764305774!GO:0022890;inorganic cation transmembrane transporter activity;0.00404379956906403!GO:0046966;thyroid hormone receptor binding;0.00423563872131406!GO:0005669;transcription factor TFIID complex;0.0042379506637674!GO:0008276;protein methyltransferase activity;0.0042379506637674!GO:0006284;base-excision repair;0.0042379506637674!GO:0031123;RNA 3'-end processing;0.00424706784995935!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00425446056342783!GO:0003711;transcription elongation regulator activity;0.00425703827409364!GO:0000139;Golgi membrane;0.00436526787748272!GO:0030176;integral to endoplasmic reticulum membrane;0.00437907573659325!GO:0000339;RNA cap binding;0.00438385018188758!GO:0006417;regulation of translation;0.00439337463142431!GO:0006505;GPI anchor metabolic process;0.00442200215618545!GO:0006338;chromatin remodeling;0.00455888448912423!GO:0035258;steroid hormone receptor binding;0.00462895085945239!GO:0050662;coenzyme binding;0.0046886169686506!GO:0006595;polyamine metabolic process;0.0049198966263802!GO:0048522;positive regulation of cellular process;0.00511974770410081!GO:0000726;non-recombinational repair;0.00516963318299348!GO:0008610;lipid biosynthetic process;0.00533625562371466!GO:0005774;vacuolar membrane;0.00541310584504017!GO:0042158;lipoprotein biosynthetic process;0.00545818784457302!GO:0006144;purine base metabolic process;0.00546093748471528!GO:0015631;tubulin binding;0.00546307344810186!GO:0047485;protein N-terminus binding;0.00550712754482741!GO:0006520;amino acid metabolic process;0.00551455875626394!GO:0051539;4 iron, 4 sulfur cluster binding;0.0055152764865583!GO:0043488;regulation of mRNA stability;0.0055152764865583!GO:0043487;regulation of RNA stability;0.0055152764865583!GO:0030521;androgen receptor signaling pathway;0.00557581782633702!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00572548151338283!GO:0000096;sulfur amino acid metabolic process;0.00590865464810929!GO:0007010;cytoskeleton organization and biogenesis;0.00592767679399421!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00603707128597777!GO:0043492;ATPase activity, coupled to movement of substances;0.00604859734650716!GO:0016272;prefoldin complex;0.00604859734650716!GO:0007034;vacuolar transport;0.0061160303222081!GO:0007021;tubulin folding;0.00614509818871299!GO:0006733;oxidoreduction coenzyme metabolic process;0.00614509818871299!GO:0006891;intra-Golgi vesicle-mediated transport;0.00628961687584661!GO:0006376;mRNA splice site selection;0.00635059216179185!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00635059216179185!GO:0008047;enzyme activator activity;0.00638645299609068!GO:0032603;fractalkine production;0.00638645299609068!GO:0050725;positive regulation of interleukin-1 beta biosynthetic process;0.00638645299609068!GO:0050752;regulation of fractalkine biosynthetic process;0.00638645299609068!GO:0045362;positive regulation of interleukin-1 biosynthetic process;0.00638645299609068!GO:0050754;positive regulation of fractalkine biosynthetic process;0.00638645299609068!GO:0001774;microglial cell activation;0.00638645299609068!GO:0050756;fractalkine metabolic process;0.00638645299609068!GO:0005766;primary lysosome;0.00638645299609068!GO:0050751;fractalkine biosynthetic process;0.00638645299609068!GO:0042222;interleukin-1 biosynthetic process;0.00638645299609068!GO:0050722;regulation of interleukin-1 beta biosynthetic process;0.00638645299609068!GO:0045360;regulation of interleukin-1 biosynthetic process;0.00638645299609068!GO:0042582;azurophil granule;0.00638645299609068!GO:0050720;interleukin-1 beta biosynthetic process;0.00638645299609068!GO:0008139;nuclear localization sequence binding;0.00640195279193764!GO:0030118;clathrin coat;0.0064383793793836!GO:0006289;nucleotide-excision repair;0.0064383793793836!GO:0004540;ribonuclease activity;0.00646783135154567!GO:0032984;macromolecular complex disassembly;0.00647434339880902!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00647434339880902!GO:0006406;mRNA export from nucleus;0.00651375312365429!GO:0005637;nuclear inner membrane;0.00652771869594387!GO:0030137;COPI-coated vesicle;0.00662847200421761!GO:0003887;DNA-directed DNA polymerase activity;0.00674669555757453!GO:0009451;RNA modification;0.00681762045330052!GO:0016584;nucleosome positioning;0.00686379751362849!GO:0030041;actin filament polymerization;0.00693543998337963!GO:0007243;protein kinase cascade;0.00720884118129056!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00726827530279923!GO:0000781;chromosome, telomeric region;0.00726827530279923!GO:0006767;water-soluble vitamin metabolic process;0.00734589277407849!GO:0051287;NAD binding;0.00737607165229886!GO:0051053;negative regulation of DNA metabolic process;0.00737607165229886!GO:0046983;protein dimerization activity;0.0075097030496648!GO:0032259;methylation;0.0075097030496648!GO:0016197;endosome transport;0.0075336211833668!GO:0042802;identical protein binding;0.00755029592643701!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00755209887197814!GO:0043414;biopolymer methylation;0.00769101051887307!GO:0051540;metal cluster binding;0.00769501471309776!GO:0051536;iron-sulfur cluster binding;0.00769501471309776!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00807321084011467!GO:0033116;ER-Golgi intermediate compartment membrane;0.00817959047153786!GO:0009124;nucleoside monophosphate biosynthetic process;0.00825264288205927!GO:0009123;nucleoside monophosphate metabolic process;0.00825264288205927!GO:0006378;mRNA polyadenylation;0.00825264288205927!GO:0000118;histone deacetylase complex;0.00825264288205927!GO:0031577;spindle checkpoint;0.00825264288205927!GO:0044262;cellular carbohydrate metabolic process;0.00839051241111255!GO:0051789;response to protein stimulus;0.00847250368647485!GO:0006986;response to unfolded protein;0.00847250368647485!GO:0005832;chaperonin-containing T-complex;0.00850797833284327!GO:0000077;DNA damage checkpoint;0.00888391475904696!GO:0009116;nucleoside metabolic process;0.0089280095379551!GO:0043022;ribosome binding;0.00899191588173214!GO:0031970;organelle envelope lumen;0.00899191588173214!GO:0031326;regulation of cellular biosynthetic process;0.00899191588173214!GO:0004532;exoribonuclease activity;0.00899191588173214!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00899191588173214!GO:0042770;DNA damage response, signal transduction;0.0090490609209029!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00979464495982281!GO:0005791;rough endoplasmic reticulum;0.010243818673353!GO:0008097;5S rRNA binding;0.0106617941603982!GO:0004003;ATP-dependent DNA helicase activity;0.0111381178602217!GO:0048471;perinuclear region of cytoplasm;0.0112166857351557!GO:0016279;protein-lysine N-methyltransferase activity;0.0113664938454701!GO:0018024;histone-lysine N-methyltransferase activity;0.0113664938454701!GO:0016278;lysine N-methyltransferase activity;0.0113664938454701!GO:0016018;cyclosporin A binding;0.011612982685375!GO:0043241;protein complex disassembly;0.0121074378117421!GO:0005765;lysosomal membrane;0.0121399201031473!GO:0006275;regulation of DNA replication;0.0121776734638769!GO:0007040;lysosome organization and biogenesis;0.0121870283685068!GO:0044437;vacuolar part;0.0124029807348269!GO:0006917;induction of apoptosis;0.0127026708166412!GO:0016791;phosphoric monoester hydrolase activity;0.0128565285873026!GO:0030518;steroid hormone receptor signaling pathway;0.0128565285873026!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0129165416795956!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0130070757870506!GO:0042054;histone methyltransferase activity;0.013192194626304!GO:0045892;negative regulation of transcription, DNA-dependent;0.0132601305584452!GO:0004576;oligosaccharyl transferase activity;0.0139631306955282!GO:0006007;glucose catabolic process;0.0139631306955282!GO:0016311;dephosphorylation;0.0141486166489226!GO:0022411;cellular component disassembly;0.0142913016759458!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0148235168935521!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0148959553288273!GO:0015002;heme-copper terminal oxidase activity;0.0148959553288273!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0148959553288273!GO:0004129;cytochrome-c oxidase activity;0.0148959553288273!GO:0050790;regulation of catalytic activity;0.0149233502812573!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0150773259792567!GO:0008250;oligosaccharyl transferase complex;0.015226583128523!GO:0006509;membrane protein ectodomain proteolysis;0.0154034705938239!GO:0033619;membrane protein proteolysis;0.0154034705938239!GO:0032039;integrator complex;0.0156134144333021!GO:0000790;nuclear chromatin;0.0157704394042665!GO:0004674;protein serine/threonine kinase activity;0.0158088338488285!GO:0008234;cysteine-type peptidase activity;0.0160142125612407!GO:0007050;cell cycle arrest;0.0160196995627419!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0161814627960133!GO:0008180;signalosome;0.0161814627960133!GO:0012502;induction of programmed cell death;0.0164923334837955!GO:0006607;NLS-bearing substrate import into nucleus;0.01660626390722!GO:0007033;vacuole organization and biogenesis;0.0168436189789962!GO:0030133;transport vesicle;0.0174598890193611!GO:0005905;coated pit;0.0180203670632424!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0181730215154329!GO:0016788;hydrolase activity, acting on ester bonds;0.0182779081856219!GO:0006220;pyrimidine nucleotide metabolic process;0.0184010118516892!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.01862595853256!GO:0009161;ribonucleoside monophosphate metabolic process;0.01862595853256!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.01862595853256!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0192150144676315!GO:0003923;GPI-anchor transamidase activity;0.0196574917146004!GO:0016255;attachment of GPI anchor to protein;0.0196574917146004!GO:0042765;GPI-anchor transamidase complex;0.0196574917146004!GO:0046112;nucleobase biosynthetic process;0.0198629931964322!GO:0005663;DNA replication factor C complex;0.0199460604453489!GO:0048487;beta-tubulin binding;0.0200045655609018!GO:0002084;protein depalmitoylation;0.0202554499637543!GO:0046822;regulation of nucleocytoplasmic transport;0.020276087758112!GO:0000086;G2/M transition of mitotic cell cycle;0.0204221968424055!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.020423670612444!GO:0006596;polyamine biosynthetic process;0.020423670612444!GO:0016569;covalent chromatin modification;0.0207792088167908!GO:0007094;mitotic cell cycle spindle assembly checkpoint;0.0208423834504604!GO:0004523;ribonuclease H activity;0.0212503255925253!GO:0030134;ER to Golgi transport vesicle;0.0212666725477153!GO:0005658;alpha DNA polymerase:primase complex;0.0214924420188401!GO:0004177;aminopeptidase activity;0.0218480794185367!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0220983232070685!GO:0010257;NADH dehydrogenase complex assembly;0.0220983232070685!GO:0033108;mitochondrial respiratory chain complex assembly;0.0220983232070685!GO:0004520;endodeoxyribonuclease activity;0.0222628420529343!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0224950028979876!GO:0008538;proteasome activator activity;0.0224950028979876!GO:0006730;one-carbon compound metabolic process;0.0224950028979876!GO:0035267;NuA4 histone acetyltransferase complex;0.0227147184365634!GO:0043524;negative regulation of neuron apoptosis;0.0227804892338819!GO:0043624;cellular protein complex disassembly;0.0234598909625701!GO:0007041;lysosomal transport;0.0235257853606417!GO:0009303;rRNA transcription;0.0235582650251577!GO:0030127;COPII vesicle coat;0.0236534140942983!GO:0012507;ER to Golgi transport vesicle membrane;0.0236534140942983!GO:0030119;AP-type membrane coat adaptor complex;0.0237593635929529!GO:0005869;dynactin complex;0.0239430271502586!GO:0000209;protein polyubiquitination;0.0241192908433825!GO:0043189;H4/H2A histone acetyltransferase complex;0.0243226879822508!GO:0018196;peptidyl-asparagine modification;0.0245023294431369!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0245023294431369!GO:0007004;telomere maintenance via telomerase;0.0245023294431369!GO:0016126;sterol biosynthetic process;0.0245635729441478!GO:0030433;ER-associated protein catabolic process;0.0249221217353962!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0249221217353962!GO:0008144;drug binding;0.0256334646710748!GO:0006266;DNA ligation;0.0257508642245976!GO:0006672;ceramide metabolic process;0.0265394062952341!GO:0008637;apoptotic mitochondrial changes;0.0267925869101957!GO:0050681;androgen receptor binding;0.0269840034497636!GO:0000287;magnesium ion binding;0.0277100769889152!GO:0030508;thiol-disulfide exchange intermediate activity;0.0277301179651096!GO:0031371;ubiquitin conjugating enzyme complex;0.0278979817788504!GO:0006643;membrane lipid metabolic process;0.027898624467541!GO:0006769;nicotinamide metabolic process;0.0280534025131911!GO:0000793;condensed chromosome;0.0282386314453548!GO:0008536;Ran GTPase binding;0.0284976505691013!GO:0019206;nucleoside kinase activity;0.0285298300195174!GO:0005784;translocon complex;0.0288988377159542!GO:0003725;double-stranded RNA binding;0.029174122538775!GO:0009889;regulation of biosynthetic process;0.0292629683646763!GO:0005680;anaphase-promoting complex;0.0292742463185792!GO:0005777;peroxisome;0.0301064838170959!GO:0042579;microbody;0.0301064838170959!GO:0008156;negative regulation of DNA replication;0.030723967002315!GO:0030125;clathrin vesicle coat;0.0314850001356891!GO:0030665;clathrin coated vesicle membrane;0.0314850001356891!GO:0046365;monosaccharide catabolic process;0.0315539684620476!GO:0004261;cathepsin G activity;0.0321322858453548!GO:0008022;protein C-terminus binding;0.0323618799458999!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0324888997136709!GO:0005996;monosaccharide metabolic process;0.0327167771556538!GO:0051098;regulation of binding;0.0329893118987621!GO:0044438;microbody part;0.0331035887318671!GO:0044439;peroxisomal part;0.0331035887318671!GO:0006303;double-strand break repair via nonhomologous end joining;0.0333418689728275!GO:0030131;clathrin adaptor complex;0.0334579754314692!GO:0015036;disulfide oxidoreductase activity;0.0334579754314692!GO:0000123;histone acetyltransferase complex;0.0334884919200143!GO:0044450;microtubule organizing center part;0.0334884919200143!GO:0040029;regulation of gene expression, epigenetic;0.0337017809035042!GO:0030036;actin cytoskeleton organization and biogenesis;0.0350179074408868!GO:0030132;clathrin coat of coated pit;0.0356234804902028!GO:0031625;ubiquitin protein ligase binding;0.0360498127560523!GO:0006278;RNA-dependent DNA replication;0.0360971627045191!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0361448333321557!GO:0004721;phosphoprotein phosphatase activity;0.0363552979692894!GO:0019318;hexose metabolic process;0.0367464892406689!GO:0051320;S phase;0.0367812890613265!GO:0006400;tRNA modification;0.0371180220771989!GO:0016408;C-acyltransferase activity;0.0374620649595763!GO:0004448;isocitrate dehydrogenase activity;0.0374620649595763!GO:0043631;RNA polyadenylation;0.0382941749365225!GO:0000175;3'-5'-exoribonuclease activity;0.0382941749365225!GO:0006740;NADPH regeneration;0.0387504067825952!GO:0006098;pentose-phosphate shunt;0.0387504067825952!GO:0000119;mediator complex;0.0390125197934956!GO:0006695;cholesterol biosynthetic process;0.0395206835742523!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0404973841555702!GO:0046982;protein heterodimerization activity;0.0405659998179384!GO:0016180;snRNA processing;0.0406168688891406!GO:0016073;snRNA metabolic process;0.0406168688891406!GO:0000097;sulfur amino acid biosynthetic process;0.0407004991906478!GO:0042026;protein refolding;0.0408600215946308!GO:0006301;postreplication repair;0.0408600215946308!GO:0003756;protein disulfide isomerase activity;0.0413104133549127!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0413104133549127!GO:0046128;purine ribonucleoside metabolic process;0.0416742012898856!GO:0042278;purine nucleoside metabolic process;0.0416742012898856!GO:0031647;regulation of protein stability;0.041698718277966!GO:0045893;positive regulation of transcription, DNA-dependent;0.04211701280425!GO:0001726;ruffle;0.0421998348728462!GO:0016044;membrane organization and biogenesis;0.0425479800695396!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0428464297530384!GO:0007096;regulation of exit from mitosis;0.0428529821874679!GO:0010458;exit from mitosis;0.0428529821874679!GO:0019783;small conjugating protein-specific protease activity;0.0428529821874679!GO:0031903;microbody membrane;0.0428668904885669!GO:0005778;peroxisomal membrane;0.0428668904885669!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0430321396720859!GO:0017166;vinculin binding;0.0430782356394776!GO:0030911;TPR domain binding;0.0434323655172599!GO:0005732;small nucleolar ribonucleoprotein complex;0.0437497374976653!GO:0046164;alcohol catabolic process;0.044025288396779!GO:0006516;glycoprotein catabolic process;0.0443348404821427!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.044892342837091!GO:0045039;protein import into mitochondrial inner membrane;0.044892342837091!GO:0019320;hexose catabolic process;0.045337280129827!GO:0006379;mRNA cleavage;0.0455373762123847!GO:0051452;cellular pH reduction;0.046208841221396!GO:0051453;regulation of cellular pH;0.046208841221396!GO:0045851;pH reduction;0.046208841221396!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.046208841221396!GO:0012510;trans-Golgi network transport vesicle membrane;0.046208841221396!GO:0004843;ubiquitin-specific protease activity;0.0465471120068525!GO:0048037;cofactor binding;0.0466041900048279!GO:0016570;histone modification;0.0467969471119363!GO:0006458;'de novo' protein folding;0.0469205014026736!GO:0051084;'de novo' posttranslational protein folding;0.0469205014026736!GO:0019362;pyridine nucleotide metabolic process;0.0469369278314826!GO:0004300;enoyl-CoA hydratase activity;0.0469369278314826!GO:0008537;proteasome activator complex;0.0483774840214915!GO:0004536;deoxyribonuclease activity;0.0484219103633921!GO:0022406;membrane docking;0.0488440942325858!GO:0048278;vesicle docking;0.0488440942325858!GO:0017134;fibroblast growth factor binding;0.049146249244591
|sample_id=10405
|sample_note=machine failed, remainder reloaded, low amount
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=MYB:2.63998255195;E2F1..5:1.80906952065;RFX2..5_RFXANK_RFXAP:1.67183807162;NANOG:1.57223595389;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.52789902115;YY1:1.36654014483;NFY{A,B,C}:1.16071914605;RFX1:1.1299253532;PPARG:0.984219501914;NRF1:0.975943117023;DMAP1_NCOR{1,2}_SMARC:0.958658960557;ELK1,4_GABP{A,B1}:0.932791888862;NFIL3:0.896711437498;SPIB:0.887987536515;ELF1,2,4:0.875572859109;SPI1:0.852990434427;FOXA2:0.826095341395;POU5F1:0.702028783683;FOXP3:0.66568524008;PAX8:0.651517848546;NR5A1,2:0.62299320722;CUX2:0.613541862045;ZNF143:0.61279868658;BREu{core}:0.610799142601;AIRE:0.584513825808;NR6A1:0.559347125777;TEF:0.554888304548;STAT1,3:0.528137690202;ETS1,2:0.517404492597;NANOG{mouse}:0.507465360957;ARID5B:0.478556378942;POU2F1..3:0.46930038715;POU1F1:0.466853356703;CDX1,2,4:0.434410616262;EN1,2:0.424024297138;HOX{A6,A7,B6,B7}:0.392526986411;NKX3-2:0.360210893261;RUNX1..3:0.347986368718;NKX2-2,8:0.330938191408;PAX5:0.329146980682;CEBPA,B_DDIT3:0.32428077773;GATA6:0.30834896768;CRX:0.306421151221;PRRX1,2:0.271138266083;HBP1_HMGB_SSRP1_UBTF:0.263500434076;OCT4_SOX2{dimer}:0.261578656529;EP300:0.244588369965;MYOD1:0.236503544566;GCM1,2:0.219847915132;CREB1:0.211856550383;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.206175740226;HLF:0.169807268864;TFDP1:0.166899788817;GFI1:0.153909345566;bHLH_family:0.139826068423;ALX1:0.12134787299;HOX{A4,D4}:0.0601356343346;STAT5{A,B}:0.0586949230915;HOX{A5,B5}:0.0421151750894;HNF4A_NR2F1,2:0.0376955925269;DBP:0.0268031563888;NKX2-3_NKX2-5:0.0217641587194;FOXN1:0.0216441935106;AR:0.0163614635033;HES1:-0.000952374326074;FOXQ1:-0.0153460639999;MTF1:-0.0285894803716;NFE2L1:-0.0288863725854;SOX{8,9,10}:-0.0298771503831;ZNF238:-0.04365685459;IRF1,2:-0.0437942221507;RORA:-0.0447459736189;HNF1A:-0.0607573576838;PRDM1:-0.0614638913297;NFE2L2:-0.0703851533252;SOX17:-0.0786702691378;HIF1A:-0.0935956465229;MYBL2:-0.12540387011;RXRA_VDR{dimer}:-0.127606108368;TGIF1:-0.135778861938;IRF7:-0.147424383613;MEF2{A,B,C,D}:-0.149017389011;ESRRA:-0.157981332864;SRF:-0.161856988765;ATF5_CREB3:-0.164880076524;PBX1:-0.168454084957;PITX1..3:-0.177364616171;TAL1_TCF{3,4,12}:-0.181764974981;KLF4:-0.183470893841;SREBF1,2:-0.186266057486;SOX5:-0.190737459107;HSF1,2:-0.20329124708;PAX2:-0.210534361292;HAND1,2:-0.22190230822;ATF4:-0.224258834478;LEF1_TCF7_TCF7L1,2:-0.233636087754;POU6F1:-0.238918079673;IKZF2:-0.282561905024;FOSL2:-0.296032283198;AHR_ARNT_ARNT2:-0.297491873812;TLX2:-0.298812188281;REST:-0.301345437192;HOXA9_MEIS1:-0.310112046124;NFE2:-0.312451540129;NKX2-1,4:-0.341505933342;ZEB1:-0.346793295441;NFKB1_REL_RELA:-0.350485526277;PAX3,7:-0.355088342432;FOX{F1,F2,J1}:-0.355818575503;VSX1,2:-0.361235072812;NKX3-1:-0.37266930537;FOXP1:-0.391479383088;LMO2:-0.397888436368;XBP1:-0.418917048776;GATA4:-0.420797451609;ZFP161:-0.427036378677;FOXD3:-0.427400635548;TBX4,5:-0.433614304781;RBPJ:-0.435798952412;TOPORS:-0.438317369333;FOS_FOS{B,L1}_JUN{B,D}:-0.439664799942;ATF6:-0.440788534113;ZNF423:-0.451065104492;PDX1:-0.460550998409;PAX6:-0.460610462799;BACH2:-0.477987137834;IKZF1:-0.479823547299;NHLH1,2:-0.494893652047;TFAP2{A,C}:-0.496912248242;LHX3,4:-0.50940747353;FOX{I1,J2}:-0.511398349277;ATF2:-0.530168416802;POU3F1..4:-0.537314529429;TBP:-0.566517122559;MZF1:-0.579991626981;MTE{core}:-0.603037551811;T:-0.609340477878;ESR1:-0.611587900106;TFAP4:-0.611703655889;SNAI1..3:-0.61388494593;PAX4:-0.61511856862;MYFfamily:-0.650786073675;NR1H4:-0.656367978402;ZBTB16:-0.66821221206;NFIX:-0.683419857544;XCPE1{core}:-0.694111017386;RXR{A,B,G}:-0.706344616332;EVI1:-0.707444248024;HMGA1,2:-0.715439980851;MED-1{core}:-0.724824259463;ZNF148:-0.735263956639;MAFB:-0.766176421988;ADNP_IRX_SIX_ZHX:-0.771142907443;GZF1:-0.774836177217;TP53:-0.795334176304;ZNF384:-0.811626853372;FOXM1:-0.843889657838;UFEwm:-0.850649806717;NKX6-1,2:-0.877042988781;HIC1:-0.878765695993;ONECUT1,2:-0.885451396866;ZBTB6:-0.899416815761;PAX1,9:-0.906045550175;GTF2I:-0.915801502779;SPZ1:-0.928697160853;ZIC1..3:-0.958717975306;SOX2:-0.98548510449;STAT2,4,6:-1.00513352076;EGR1..3:-1.01623741481;JUN:-1.02034996198;TLX1..3_NFIC{dimer}:-1.0409378791;TFAP2B:-1.04133508346;TEAD1:-1.04174909318;SP1:-1.06955115389;GTF2A1,2:-1.07898736072;EBF1:-1.08143229755;NR3C1:-1.11565234374;TFCP2:-1.14474183492;HMX1:-1.14796450301;FOXO1,3,4:-1.14949981829;RREB1:-1.15866160343;MAZ:-1.18334155616;GFI1B:-1.24228199739;CDC5L:-1.24520010554;BPTF:-1.25378323696;FOX{D1,D2}:-1.25585976484;FOXL1:-1.26974303879;ALX4:-1.30833233115;GLI1..3:-1.32753243891;NFATC1..3:-1.32772848788;PATZ1:-1.32889904217;SMAD1..7,9:-1.52331595128
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10405-106A9;search_select_hide=table117:FF:10405-106A9
}}
}}

Latest revision as of 13:59, 3 June 2020

Name:acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed)
Species:Human (Homo sapiens)
Library ID:CNhs10724
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage1 year old child
sexmale
age1
cell typemonoblast
cell lineTHP-1
companyNA
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004824
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10724 CAGE DRX007815 DRR008687
Accession ID Hg19

Library idBAMCTSS
CNhs10724 DRZ000112 DRZ001497
Accession ID Hg38

Library idBAMCTSS
CNhs10724 DRZ011462 DRZ012847
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0746
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.693
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived1.073
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0657
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0368
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.209
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.263
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.358
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.467
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0348
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.067
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.49
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.222
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.125
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.176
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.125
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10724

Jaspar motifP-value
MA0002.20.0907
MA0003.10.879
MA0004.10.2
MA0006.10.176
MA0007.10.505
MA0009.10.0451
MA0014.10.483
MA0017.10.00634
MA0018.20.852
MA0019.10.357
MA0024.12.59928e-9
MA0025.10.00191
MA0027.10.672
MA0028.14.02925e-8
MA0029.10.86
MA0030.10.204
MA0031.10.0275
MA0035.20.924
MA0038.10.212
MA0039.20.662
MA0040.10.206
MA0041.10.358
MA0042.10.145
MA0043.11.11995e-4
MA0046.10.747
MA0047.20.45
MA0048.10.135
MA0050.10.401
MA0051.10.23
MA0052.10.443
MA0055.10.0253
MA0057.10.686
MA0058.10.112
MA0059.10.00645
MA0060.12.35813e-7
MA0061.10.347
MA0062.27.68189e-15
MA0065.20.0368
MA0066.10.691
MA0067.10.166
MA0068.10.866
MA0069.10.298
MA0070.10.894
MA0071.10.14
MA0072.10.434
MA0073.10.621
MA0074.10.222
MA0076.19.5122e-9
MA0077.10.974
MA0078.10.777
MA0079.20.306
MA0080.23.51646e-13
MA0081.11.92152e-4
MA0083.10.793
MA0084.10.268
MA0087.10.169
MA0088.10.00648
MA0090.11.59405e-4
MA0091.10.562
MA0092.10.548
MA0093.10.158
MA0099.28.277e-4
MA0100.11.49792e-7
MA0101.10.247
MA0102.28.95306e-6
MA0103.10.411
MA0104.28.42149e-5
MA0105.10.552
MA0106.10.375
MA0107.10.0137
MA0108.23.37056e-5
MA0111.10.136
MA0112.20.396
MA0113.10.584
MA0114.10.0033
MA0115.10.192
MA0116.10.0029
MA0117.10.533
MA0119.10.644
MA0122.10.714
MA0124.10.592
MA0125.10.995
MA0131.10.00935
MA0135.10.986
MA0136.19.8968e-24
MA0137.20.88
MA0138.20.311
MA0139.10.822
MA0140.10.543
MA0141.10.128
MA0142.10.685
MA0143.10.704
MA0144.10.635
MA0145.10.738
MA0146.10.316
MA0147.17.65313e-5
MA0148.10.345
MA0149.10.58
MA0150.10.125
MA0152.10.442
MA0153.10.323
MA0154.10.781
MA0155.10.0823
MA0156.12.95371e-19
MA0157.10.0748
MA0159.10.73
MA0160.10.289
MA0162.10.395
MA0163.15.42695e-7
MA0164.10.78
MA0258.10.186
MA0259.10.028



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10724

Novel motifP-value
10.129
100.0336
1000.177
1010.292
1020.982
1030.357
1040.655
1050.808
1060.0423
1070.0337
1080.216
1090.0313
110.271
1100.375
1110.635
1120.746
1130.164
1140.496
1150.757
1160.865
1170.0546
1180.128
1190.141
120.695
1200.502
1210.667
1220.161
1230.241
1240.277
1250.624
1260.583
1270.0698
1280.0644
1290.826
130.00159
1300.489
1310.00307
1320.655
1330.332
1340.466
1350.0594
1360.101
1370.182
1380.89
1390.697
140.835
1400.0774
1410.973
1420.584
1430.15
1440.611
1450.427
1460.82
1470.0568
1480.0174
1490.0845
150.467
1500.594
1510.446
1520.0509
1530.47
1540.64
1550.0689
1560.968
1570.449
1580.479
1590.385
160.577
1600.792
1610.134
1620.351
1630.518
1640.502
1650.0138
1660.256
1670.389
1680.873
1690.712
170.391
180.514
190.986
20.112
200.375
210.597
220.866
230.00478
240.0573
250.238
260.941
270.849
280.928
290.0217
30.0625
300.108
310.252
320.0377
330.279
340.406
350.699
360.0463
370.477
380.527
390.123
40.344
400.376
410.745
420.116
430.996
440.821
450.256
460.404
470.0821
480.146
490.973
50.845
500.955
510.88
520.118
530.906
540.418
550.396
560.586
570.497
580.303
590.982
60.248
600.431
610.121
620.498
630.616
640.503
650.411
660.0145
670.856
680.322
690.738
70.111
700.0781
710.153
720.995
730.846
740.93
750.0436
760.337
770.245
780.609
790.198
80.394
800.439
810.65
820.517
830.501
840.538
850.0337
860.763
870.0322
880.406
890.325
90.557
900.0814
910.222
920.0339
930.802
940.95
950.0042
960.758
970.67
980.758
990.146



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10724


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101370 (THP-1 cell sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0102332 (monocytic leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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