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{{f5samples
{{f5samples
|id=FF:10604-108F1
|DRA_sample_Accession=CAGE@SAMD00005594
|name=embryonic pancreas cell line:1B2C6
|accession_numbers=CAGE;DRX007872;DRR008744;DRZ000169;DRZ001554;DRZ011519;DRZ012904
|sample_id=10604
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949
|rna_tube_id=108F1
|rna_box=108
|rna_position=F1
|sample_cell_lot=
|sample_cell_catalog=RCB0795
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=pancreas
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=19 week embryo
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=2.02
|rna_od260/280=2.12
|sample_cell_type=unclassifiable
|sample_cell_line=1B2C6
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=38.44177
|rna_concentration=0.81791
|sample_note=
|profile_hcage=CNhs11731,LSID819,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000160,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0001007,UBERON:0001041,UBERON:0001045,UBERON:0001048,UBERON:0001062,UBERON:0001264,UBERON:0001555,UBERON:0002050,UBERON:0002075,UBERON:0002100,UBERON:0002108,UBERON:0002114,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003104,UBERON:0003921,UBERON:0003922,UBERON:0003923,UBERON:0003924,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004458,UBERON:0004921,UBERON:0005177,UBERON:0005409,UBERON:0005423,UBERON:0007026,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100669
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr3:12330560..12330579,+!p1@PPARG!1.78!67.79!PPARG;;chr2:172967621..172967637,-!p1@DLX2!1.70!126.28!DLX2;;chr20:42543441..42543497,+!p1@TOX2!1.48!128.28!TOX2;;chr20:55204351..55204377,+!p1@TFAP2C!1.48!36.56!TFAP2C;;chr15:67418119..67418162,+!p5@SMAD3!1.43!28.58!SMAD3;;chr20:42543506..42543549,+!p2@TOX2!1.39!55.17!TOX2;;chr2:45168997..45169020,+!p4@SIX3!1.32!19.94!SIX3;;chr11:65667884..65667895,-!p2@FOSL1!1.31!74.44!FOSL1;;chr12:66218598..66218645,+!p2@HMGA2!1.26!78.43!HMGA2;;chr6:34204921..34204939,+!p3@HMGA1!1.25!494.50!HMGA1;;chr15:67418047..67418093,+!p4@SMAD3!1.24!20.60!SMAD3;;chr12:66218836..66218888,+!p1@HMGA2!1.21!139.58!HMGA2;;chr2:45168834..45168847,+!p2@SIX3!1.21!15.29!SIX3;;chr16:86600426..86600441,+!p1@FOXC2!1.17!33.90!FOXC2;;chr6:10415484..10415508,-!p3@TFAP2A!1.16!13.29!TFAP2A;;chr6:126240380..126240430,+!p2@NCOA7!1.15!33.90!NCOA7;;chr12:27485785..27485816,+!p1@ARNTL2!1.12!85.08!ARNTL2;;chr6:10412600..10412637,-!p1@TFAP2A!1.11!19.94!TFAP2A;;chr3:12329358..12329393,+!p3@PPARG!1.10!28.58!PPARG;;chr11:65667846..65667868,-!p1@FOSL1!1.09!297.76!FOSL1;;chr20:55205825..55205847,+!p2@TFAP2C!1.09!11.30!TFAP2C;;chr12:19592405..19592492,+!p2@AEBP2!1.07!93.72!AEBP2;;chr2:176969228..176969260,+!p1@HOXD11!1.07!10.63!HOXD11;;chr2:101436564..101436647,+!p1@NPAS2!1.06!213.35!NPAS2;;chr12:66218003..66218018,+!p9@HMGA2!1.05!12.63!HMGA2;;chr17:41623692..41623715,-!p1@ETV4!1.04!43.20!ETV4;;chr6:10412392..10412409,-!p4@TFAP2A!1.04!11.30!TFAP2A;;chr16:86612320..86612394,+!p1@FOXL1!1.04!9.97!FOXL1;;chr17:70117153..70117174,+!p1@SOX9!1.02!99.03!SOX9;;chr7:26191809..26191890,+!p1@NFE2L3!1.02!47.86!NFE2L3;;chr2:200323414..200323455,-!p1@SATB2!1.02!20.60!SATB2;;chr9:129376201..129376225,+!p1@LMX1B!1.01!9.31!LMX1B;;chr9:110252035..110252057,-!p1@KLF4!1.00!148.22!KLF4;;chr2:200322654..200322707,-!p2@SATB2!1.00!13.29!SATB2;;chr1:25256756..25256774,-!p1@RUNX3!0.99!16.62!RUNX3;;chr17:41622925..41622976,-!p3@ETV4!0.99!13.29!ETV4;;chr6:126240463..126240489,+!p6@NCOA7!0.99!9.97!NCOA7;;chr11:65686802..65686818,+!p6@DRAP1!0.97!14.62!DRAP1;;chr6:34204672..34204692,+!p1@HMGA1!0.95!928.52!HMGA1;;chr11:61520075..61520136,+!p1@C11orf9!0.95!17.28!C11orf9;;chr10:8095593..8095625,+!p3@GATA3!0.95!9.31!GATA3;;chr21:38071430..38071456,+!p1@SIM2!0.95!7.98!SIM2;;chr15:67418177..67418204,+!p9@SMAD3!0.95!7.98!SMAD3;;chr16:86600870..86600921,+!p2@FOXC2!0.95!7.98!FOXC2;;chr9:114287433..114287513,+!p1@ZNF483!0.94!20.60!ZNF483;;chr17:41622765..41622821,-!p2@ETV4!0.94!11.96!ETV4;;chr12:66218443..66218461,+!p8@HMGA2!0.94!9.97!HMGA2;;chr14:61116183..61116208,-!p1@SIX1!0.93!29.24!SIX1;;chr17:46687959..46688007,-!p2@HOXB7!0.93!10.63!HOXB7;;chr10:8096772..8096787,+!p2@GATA3!0.92!8.64!GATA3;;chr3:157823517..157823562,-!p1@SHOX2!0.92!7.98!SHOX2;;chr2:176969179..176969226,+!p2@HOXD11!0.92!7.31!HOXD11;;chr12:27485823..27485868,+!p2@ARNTL2!0.91!29.91!ARNTL2;;chr12:19592602..19592648,+!p1@AEBP2!0.90!84.41!AEBP2;;chr12:66218573..66218596,+!p7@HMGA2!0.90!10.63!HMGA2;;chr20:32274179..32274213,-!p1@E2F1!0.89!47.19!E2F1;;chr9:109625229..109625282,+!p2@ZNF462!0.89!11.30!ZNF462;;chr6:126240442..126240459,+!p4@NCOA7!0.88!8.64!NCOA7;;chr5:174151612..174151633,+!p2@MSX2!0.88!6.65!MSX2;;chr7:27153454..27153469,-!p2@HOXA3!0.88!6.65!HOXA3;;chr15:67391010..67391046,+!p13@SMAD3!0.88!6.65!SMAD3;;chr17:46806067..46806097,-!p1@HOXB13!0.88!6.65!HOXB13;;chr13:79177703..79177729,-!p2@POU4F1!0.88!6.65!POU4F1;;chr20:48599506..48599526,+!p1@SNAI1!0.86!42.54!SNAI1;;chr11:47279504..47279563,+!p1@NR1H3!0.86!14.62!NR1H3;;chr17:46126136..46126152,+!p1@NFE2L1!0.85!331.66!NFE2L1;;chr12:77459306..77459365,-!p1@E2F7!0.85!81.09!E2F7;;chr5:321810..321877,+!p1@AHRR!0.84!19.94!AHRR;;chr2:172950227..172950249,+!p2@DLX1!0.84!5.98!DLX1;;chr2:45168959..45168990,+!p6@SIX3!0.84!5.98!SIX3;;chr17:35294075..35294102,+!p1@ENST00000559335!0.84!5.98!LHX1;;chr21:38071403..38071428,+!p2@SIM2!0.84!5.98!SIM2;;chr11:65686732..65686756,+!p2@DRAP1!0.83!25.92!DRAP1;;chr5:174151553..174151610,+!p1@MSX2!0.83!9.97!MSX2;;chr2:10183651..10183713,+!p1@KLF11!0.82!44.53!KLF11;;chr3:141868357..141868393,-!p3@TFDP2!0.82!39.21!TFDP2;;chr12:66218255..66218304,+!p3@HMGA2!0.82!15.95!HMGA2;;chr19:33864571..33864596,+!p2@CEBPG!0.82!14.62!CEBPG;;chr8:67525443..67525459,-!p2@MYBL1!0.82!8.64!MYBL1;;chr8:103665947..103665981,-!p3@KLF10!0.81!7.98!KLF10;;chr13:45010939..45011033,-!p1@TSC22D1!0.80!380.85!TSC22D1;;chr12:66218378..66218401,+!p6@HMGA2!0.80!8.64!HMGA2;;chr19:33865009..33865090,+!p3@CEBPG!0.80!7.31!CEBPG;;chr12:54447599..54447630,+!p3@HOXC4!0.80!6.65!HOXC4;;chr6:10415276..10415341,-!p2@TFAP2A!0.80!6.65!TFAP2A;;chr2:45169143..45169167,+!p5@SIX3!0.80!5.32!SIX3;;chr15:67418099..67418118,+!p16@SMAD3!0.80!5.32!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.80!5.32!ETV4;;chr17:46682321..46682362,-!p1@HOXB6!0.80!5.32!HOXB6;;chr5:180288248..180288291,-!p1@ZFP62!0.79!34.56!ZFP62;;chr20:50179368..50179392,-!p2@NFATC2!0.78!6.65!NFATC2;;chr3:169381420..169381535,-!p1@MECOM!0.78!5.98!MECOM;;chr8:103667935..1036679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|fonse_cell_line=FF:0100669
|fonse_cell_line=FF:0100669
|fonse_cell_line_closure=FF:0100669
|fonse_cell_line_closure=FF:0100669
Line 66: Line 39:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
|def=
|has_quality=
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|name=embryonic pancreas cell line:1B2C6
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|rna_box=108
|rna_catalog_number=
|rna_concentration=0.81791
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.02
|rna_od260/280=2.12
|rna_position=F1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=108F1
|rna_weight_ug=38.44177
|sample_age=19 week embryo
|sample_category=cell lines
|sample_cell_catalog=RCB0795
|sample_cell_line=1B2C6
|sample_cell_lot=
|sample_cell_type=unclassifiable
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.69577436709169e-251!GO:0043226;organelle;8.99250353280239e-209!GO:0043229;intracellular organelle;2.97928827918121e-208!GO:0043231;intracellular membrane-bound organelle;4.14129289665921e-204!GO:0043227;membrane-bound organelle;6.30140549518968e-204!GO:0005737;cytoplasm;8.27994630606563e-171!GO:0044422;organelle part;4.51218487823199e-139!GO:0044446;intracellular organelle part;1.0776287338372e-137!GO:0044444;cytoplasmic part;1.34491389251218e-113!GO:0032991;macromolecular complex;2.10731161524221e-100!GO:0005634;nucleus;1.11766527216339e-98!GO:0044237;cellular metabolic process;3.2338039160155e-92!GO:0044238;primary metabolic process;9.28044200870105e-91!GO:0043170;macromolecule metabolic process;9.48668221128812e-91!GO:0030529;ribonucleoprotein complex;1.35680705647493e-86!GO:0044428;nuclear part;6.91043821801558e-81!GO:0003723;RNA binding;5.67798287145057e-79!GO:0043233;organelle lumen;1.36041607629128e-72!GO:0031974;membrane-enclosed lumen;1.36041607629128e-72!GO:0005515;protein binding;6.36289174137693e-70!GO:0043283;biopolymer metabolic process;7.74107743412973e-59!GO:0005739;mitochondrion;4.61038680183455e-57!GO:0006396;RNA processing;1.81484171055956e-52!GO:0016043;cellular component organization and biogenesis;1.82281206945047e-52!GO:0006412;translation;1.68988834748525e-51!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.65351895399309e-51!GO:0010467;gene expression;1.83257933334924e-50!GO:0043234;protein complex;6.15083489182439e-50!GO:0019538;protein metabolic process;8.38526094102166e-50!GO:0005840;ribosome;1.03336316256454e-49!GO:0031981;nuclear lumen;9.75367113018072e-49!GO:0044260;cellular macromolecule metabolic process;1.16041451080729e-45!GO:0044267;cellular protein metabolic process;2.2624690643664e-45!GO:0031090;organelle membrane;1.61272106001583e-43!GO:0003735;structural constituent of ribosome;2.45903025939395e-43!GO:0016071;mRNA metabolic process;6.52688674076317e-42!GO:0015031;protein transport;9.90671215614778e-40!GO:0033036;macromolecule localization;1.02908924759296e-39!GO:0043228;non-membrane-bound organelle;4.46855004054343e-38!GO:0043232;intracellular non-membrane-bound organelle;4.46855004054343e-38!GO:0006259;DNA metabolic process;5.33015766502596e-38!GO:0009059;macromolecule biosynthetic process;5.71563199006433e-38!GO:0033279;ribosomal subunit;1.30031786979677e-37!GO:0008380;RNA splicing;5.30918864085633e-37!GO:0044249;cellular biosynthetic process;3.2182847243732e-36!GO:0031967;organelle envelope;6.64456922397753e-36!GO:0045184;establishment of protein localization;7.50535271674279e-36!GO:0031975;envelope;1.05624194579094e-35!GO:0008104;protein localization;1.34632592686103e-35!GO:0009058;biosynthetic process;3.2010905479706e-35!GO:0044429;mitochondrial part;3.59192453438047e-35!GO:0006397;mRNA processing;9.49329028529078e-35!GO:0005829;cytosol;2.50639094445576e-34!GO:0006996;organelle organization and biogenesis;1.13313910304526e-33!GO:0046907;intracellular transport;6.50287460247207e-33!GO:0065003;macromolecular complex assembly;1.05605884558716e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.17675331347009e-32!GO:0003676;nucleic acid binding;6.990461699625e-32!GO:0000166;nucleotide binding;3.64997548418637e-30!GO:0005654;nucleoplasm;8.82090333090588e-30!GO:0022607;cellular component assembly;1.72111073948081e-28!GO:0007049;cell cycle;2.6305970568834e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.91548969477179e-27!GO:0005681;spliceosome;1.22145760349886e-26!GO:0006886;intracellular protein transport;1.11167262113311e-25!GO:0044451;nucleoplasm part;4.27495309679176e-25!GO:0016462;pyrophosphatase activity;9.13703343465639e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.17250942798088e-24!GO:0016070;RNA metabolic process;1.28075221568187e-24!GO:0017111;nucleoside-triphosphatase activity;1.28075221568187e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.79400345500329e-24!GO:0051649;establishment of cellular localization;5.9532691855895e-23!GO:0019866;organelle inner membrane;2.04862939109914e-22!GO:0051641;cellular localization;2.44716400296026e-22!GO:0032553;ribonucleotide binding;6.93169466070442e-22!GO:0032555;purine ribonucleotide binding;6.93169466070442e-22!GO:0005740;mitochondrial envelope;7.41309257871914e-22!GO:0044445;cytosolic part;1.14963430196145e-21!GO:0005730;nucleolus;1.14963430196145e-21!GO:0017076;purine nucleotide binding;2.09312482565703e-21!GO:0006974;response to DNA damage stimulus;1.05522549615196e-20!GO:0031966;mitochondrial membrane;1.32977516591043e-20!GO:0005743;mitochondrial inner membrane;1.50946781215849e-20!GO:0008134;transcription factor binding;1.67717802578169e-20!GO:0022402;cell cycle process;3.29325152664886e-20!GO:0015934;large ribosomal subunit;8.17669587927437e-20!GO:0006457;protein folding;1.38919314809978e-19!GO:0005524;ATP binding;3.37848690160887e-19!GO:0022618;protein-RNA complex assembly;6.950405645061e-19!GO:0032559;adenyl ribonucleotide binding;7.13459738349617e-19!GO:0015935;small ribosomal subunit;7.5369695650348e-19!GO:0012505;endomembrane system;8.10092166218089e-19!GO:0006512;ubiquitin cycle;1.2015255229698e-18!GO:0030554;adenyl nucleotide binding;3.342821350885e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.89928467500376e-18!GO:0006119;oxidative phosphorylation;6.20993680263517e-18!GO:0044265;cellular macromolecule catabolic process;6.20993680263517e-18!GO:0006281;DNA repair;6.21200170783998e-18!GO:0043285;biopolymer catabolic process;6.6858753621597e-18!GO:0019941;modification-dependent protein catabolic process;7.26590105314339e-18!GO:0043632;modification-dependent macromolecule catabolic process;7.26590105314339e-18!GO:0044257;cellular protein catabolic process;1.12293904210746e-17!GO:0016874;ligase activity;1.38650358336216e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.61492830842345e-17!GO:0006260;DNA replication;1.12069173096727e-16!GO:0000278;mitotic cell cycle;1.60074070559133e-16!GO:0043412;biopolymer modification;1.88090169238792e-16!GO:0005694;chromosome;3.29980713630099e-16!GO:0031980;mitochondrial lumen;5.09428172569459e-16!GO:0005759;mitochondrial matrix;5.09428172569459e-16!GO:0044455;mitochondrial membrane part;9.74803259615195e-16!GO:0006366;transcription from RNA polymerase II promoter;1.02598720800753e-15!GO:0016887;ATPase activity;1.12387631915976e-15!GO:0009057;macromolecule catabolic process;1.13265507618088e-15!GO:0030163;protein catabolic process;1.5713126155712e-15!GO:0051276;chromosome organization and biogenesis;1.70304519325328e-15!GO:0008135;translation factor activity, nucleic acid binding;1.92081851398056e-15!GO:0048770;pigment granule;2.14767761083883e-15!GO:0042470;melanosome;2.14767761083883e-15!GO:0042623;ATPase activity, coupled;5.13589250728199e-15!GO:0051082;unfolded protein binding;5.6520974001877e-15!GO:0005635;nuclear envelope;6.93450597427775e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.59889319014145e-14!GO:0044453;nuclear membrane part;2.76901486146671e-14!GO:0031965;nuclear membrane;3.31326042722324e-14!GO:0006464;protein modification process;3.68070408772842e-14!GO:0042254;ribosome biogenesis and assembly;3.82213218414277e-14!GO:0016604;nuclear body;4.46929669361168e-14!GO:0006605;protein targeting;4.84277181596228e-14!GO:0000502;proteasome complex (sensu Eukaryota);5.21353134448726e-14!GO:0003712;transcription cofactor activity;5.37782786832026e-14!GO:0051301;cell division;7.17760253668519e-14!GO:0009719;response to endogenous stimulus;8.7233477847536e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.96911362883043e-14!GO:0000375;RNA splicing, via transesterification reactions;9.96911362883043e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.96911362883043e-14!GO:0005746;mitochondrial respiratory chain;1.36086666172162e-13!GO:0044427;chromosomal part;1.48541826239795e-13!GO:0048193;Golgi vesicle transport;2.87912495011913e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.76889936482972e-13!GO:0005761;mitochondrial ribosome;4.70635738707704e-13!GO:0000313;organellar ribosome;4.70635738707704e-13!GO:0005794;Golgi apparatus;4.70635738707704e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.66604103114406e-13!GO:0006913;nucleocytoplasmic transport;7.51710363852846e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;8.33997048443903e-13!GO:0005643;nuclear pore;9.65540879854641e-13!GO:0051169;nuclear transport;1.45935749169457e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.64974823322994e-12!GO:0003954;NADH dehydrogenase activity;1.64974823322994e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.64974823322994e-12!GO:0043687;post-translational protein modification;1.87699411513915e-12!GO:0000087;M phase of mitotic cell cycle;2.13851057140653e-12!GO:0004386;helicase activity;2.72642590638994e-12!GO:0022403;cell cycle phase;3.26034967430245e-12!GO:0007067;mitosis;5.03888084485578e-12!GO:0006323;DNA packaging;5.21303849398011e-12!GO:0051726;regulation of cell cycle;5.84104624135431e-12!GO:0008026;ATP-dependent helicase activity;6.68622564999859e-12!GO:0016192;vesicle-mediated transport;9.9385346030532e-12!GO:0000074;regulation of progression through cell cycle;1.47641879546585e-11!GO:0003743;translation initiation factor activity;1.48674358373509e-11!GO:0044248;cellular catabolic process;1.50292558308536e-11!GO:0051186;cofactor metabolic process;1.77523988677322e-11!GO:0006403;RNA localization;2.23182864506899e-11!GO:0005783;endoplasmic reticulum;2.39163355518615e-11!GO:0050657;nucleic acid transport;3.35123232771389e-11!GO:0051236;establishment of RNA localization;3.35123232771389e-11!GO:0050658;RNA transport;3.35123232771389e-11!GO:0006399;tRNA metabolic process;4.49560048859135e-11!GO:0006413;translational initiation;4.9668316382295e-11!GO:0044432;endoplasmic reticulum part;7.99388688174252e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.12654294220296e-10!GO:0042773;ATP synthesis coupled electron transport;1.12654294220296e-10!GO:0012501;programmed cell death;1.2651090910998e-10!GO:0046930;pore complex;1.34893317362389e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.40309013247092e-10!GO:0045271;respiratory chain complex I;1.40309013247092e-10!GO:0005747;mitochondrial respiratory chain complex I;1.40309013247092e-10!GO:0016607;nuclear speck;1.50364128572938e-10!GO:0006915;apoptosis;2.25527660714303e-10!GO:0006446;regulation of translational initiation;2.84079832670296e-10!GO:0050794;regulation of cellular process;2.88130606611643e-10!GO:0000279;M phase;3.13773651909909e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.10483872929825e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.65676414732472e-10!GO:0004812;aminoacyl-tRNA ligase activity;5.65676414732472e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.65676414732472e-10!GO:0008639;small protein conjugating enzyme activity;5.84184073890016e-10!GO:0008219;cell death;8.66053801925959e-10!GO:0016265;death;8.66053801925959e-10!GO:0015630;microtubule cytoskeleton;8.70510778545949e-10!GO:0043038;amino acid activation;9.11105323618228e-10!GO:0006418;tRNA aminoacylation for protein translation;9.11105323618228e-10!GO:0043039;tRNA aminoacylation;9.11105323618228e-10!GO:0005793;ER-Golgi intermediate compartment;9.2287130148625e-10!GO:0004842;ubiquitin-protein ligase activity;1.04695217164188e-09!GO:0006364;rRNA processing;1.2266400219968e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.27101999364228e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.42422354612212e-09!GO:0048523;negative regulation of cellular process;1.74827729847678e-09!GO:0051028;mRNA transport;2.22096799077671e-09!GO:0006461;protein complex assembly;2.36993473204957e-09!GO:0065002;intracellular protein transport across a membrane;4.15856546605622e-09!GO:0016072;rRNA metabolic process;4.37277737999454e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.07861073304501e-09!GO:0006333;chromatin assembly or disassembly;5.27585853671448e-09!GO:0000785;chromatin;5.90322170637844e-09!GO:0017038;protein import;6.98025967628468e-09!GO:0019787;small conjugating protein ligase activity;7.20090528476894e-09!GO:0005813;centrosome;8.96146776595315e-09!GO:0005768;endosome;9.24649958855507e-09!GO:0016568;chromatin modification;9.24649958855507e-09!GO:0065004;protein-DNA complex assembly;9.29025930502013e-09!GO:0006732;coenzyme metabolic process;1.22418946207936e-08!GO:0006261;DNA-dependent DNA replication;1.22418946207936e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.3491866515558e-08!GO:0016740;transferase activity;1.3491866515558e-08!GO:0005815;microtubule organizing center;1.44902068804129e-08!GO:0016881;acid-amino acid ligase activity;1.74078614510683e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.83398634275308e-08!GO:0016564;transcription repressor activity;3.37247245709845e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.37543354890696e-08!GO:0048519;negative regulation of biological process;3.64164441152506e-08!GO:0009259;ribonucleotide metabolic process;3.81774664217062e-08!GO:0000245;spliceosome assembly;5.3742784400116e-08!GO:0016563;transcription activator activity;5.50791268715011e-08!GO:0051246;regulation of protein metabolic process;6.06882547906044e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.70905687536856e-08!GO:0006163;purine nucleotide metabolic process;6.82706575915398e-08!GO:0008565;protein transporter activity;7.02996352014489e-08!GO:0043566;structure-specific DNA binding;7.07045770600644e-08!GO:0006164;purine nucleotide biosynthetic process;1.05848417792857e-07!GO:0009260;ribonucleotide biosynthetic process;1.1028895445607e-07!GO:0005667;transcription factor complex;1.15942449030311e-07!GO:0003714;transcription corepressor activity;1.18367395031454e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.33300433025123e-07!GO:0005789;endoplasmic reticulum membrane;2.11823052926577e-07!GO:0016779;nucleotidyltransferase activity;2.13402819785346e-07!GO:0009150;purine ribonucleotide metabolic process;2.47595685416912e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.58151715075192e-07!GO:0050789;regulation of biological process;2.82399152365529e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.35958761768604e-07!GO:0003924;GTPase activity;3.40551404704676e-07!GO:0031324;negative regulation of cellular metabolic process;3.47801989623941e-07!GO:0009152;purine ribonucleotide biosynthetic process;3.73738298267508e-07!GO:0003724;RNA helicase activity;3.84015241572687e-07!GO:0032446;protein modification by small protein conjugation;4.78912558118717e-07!GO:0009055;electron carrier activity;5.41038609490026e-07!GO:0006888;ER to Golgi vesicle-mediated transport;5.86023177632159e-07!GO:0016567;protein ubiquitination;6.34837772303671e-07!GO:0051170;nuclear import;6.90345614149783e-07!GO:0015986;ATP synthesis coupled proton transport;7.13457425527994e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.13457425527994e-07!GO:0019829;cation-transporting ATPase activity;7.76323319630471e-07!GO:0007005;mitochondrion organization and biogenesis;1.16040679176688e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.25891893996112e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.25891893996112e-06!GO:0043623;cellular protein complex assembly;1.27146463298946e-06!GO:0019222;regulation of metabolic process;1.2932600918884e-06!GO:0003713;transcription coactivator activity;1.33409089967659e-06!GO:0006606;protein import into nucleus;1.42286732084859e-06!GO:0051188;cofactor biosynthetic process;1.47342419957446e-06!GO:0044431;Golgi apparatus part;1.50540327865298e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.55531624620976e-06!GO:0006793;phosphorus metabolic process;1.56807937694832e-06!GO:0006796;phosphate metabolic process;1.56807937694832e-06!GO:0043067;regulation of programmed cell death;1.57472129971015e-06!GO:0009892;negative regulation of metabolic process;1.58904829594006e-06!GO:0042981;regulation of apoptosis;1.82460631626162e-06!GO:0003697;single-stranded DNA binding;1.82946813199317e-06!GO:0009141;nucleoside triphosphate metabolic process;1.94710833940076e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.96967274798517e-06!GO:0005819;spindle;2.2053846704845e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.40543099212468e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.40543099212468e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.50100218080671e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.8987049231715e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.8987049231715e-06!GO:0009060;aerobic respiration;3.1280755911589e-06!GO:0016481;negative regulation of transcription;3.23231085237148e-06!GO:0009056;catabolic process;4.64091086652337e-06!GO:0044440;endosomal part;5.03298956830812e-06!GO:0010008;endosome membrane;5.03298956830812e-06!GO:0006754;ATP biosynthetic process;5.59776696623257e-06!GO:0006753;nucleoside phosphate metabolic process;5.59776696623257e-06!GO:0003899;DNA-directed RNA polymerase activity;5.9302356112124e-06!GO:0000151;ubiquitin ligase complex;7.10709067301471e-06!GO:0045259;proton-transporting ATP synthase complex;7.33250645707999e-06!GO:0043069;negative regulation of programmed cell death;7.33250645707999e-06!GO:0006334;nucleosome assembly;7.45533428855746e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.46538680189339e-06!GO:0016787;hydrolase activity;7.57272754769943e-06!GO:0046034;ATP metabolic process;8.88852642027962e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.01205863750408e-05!GO:0031497;chromatin assembly;1.19146719819122e-05!GO:0045786;negative regulation of progression through cell cycle;1.28655284029378e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.35055695842732e-05!GO:0005788;endoplasmic reticulum lumen;1.67581034913205e-05!GO:0008186;RNA-dependent ATPase activity;1.70878056000756e-05!GO:0043066;negative regulation of apoptosis;1.84724753653838e-05!GO:0006916;anti-apoptosis;1.92743966374075e-05!GO:0016310;phosphorylation;2.3427132478753e-05!GO:0005762;mitochondrial large ribosomal subunit;2.37063597909308e-05!GO:0000315;organellar large ribosomal subunit;2.37063597909308e-05!GO:0030120;vesicle coat;2.37063597909308e-05!GO:0030662;coated vesicle membrane;2.37063597909308e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.42656817979719e-05!GO:0051427;hormone receptor binding;2.55106102889162e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.68144171206555e-05!GO:0005525;GTP binding;2.68250278621493e-05!GO:0000139;Golgi membrane;2.999360883756e-05!GO:0005769;early endosome;3.24713823693703e-05!GO:0003682;chromatin binding;3.7707403065438e-05!GO:0031988;membrane-bound vesicle;3.7707403065438e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.16586642067431e-05!GO:0009108;coenzyme biosynthetic process;4.44173478094242e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.67286875191205e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.96028301770929e-05!GO:0051329;interphase of mitotic cell cycle;5.05416353445592e-05!GO:0045333;cellular respiration;5.27493059555778e-05!GO:0019899;enzyme binding;5.30231495760926e-05!GO:0003690;double-stranded DNA binding;5.33454359277279e-05!GO:0051052;regulation of DNA metabolic process;5.39716581922183e-05!GO:0004004;ATP-dependent RNA helicase activity;5.4961271305666e-05!GO:0035257;nuclear hormone receptor binding;5.64686753516572e-05!GO:0006752;group transfer coenzyme metabolic process;6.00094204457909e-05!GO:0051168;nuclear export;6.30963137256119e-05!GO:0005657;replication fork;6.4432806945041e-05!GO:0045941;positive regulation of transcription;7.4279265727131e-05!GO:0000075;cell cycle checkpoint;8.23157453202231e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.56584695204552e-05!GO:0043021;ribonucleoprotein binding;8.66461043236785e-05!GO:0048522;positive regulation of cellular process;8.72724407795916e-05!GO:0005770;late endosome;8.77879266706902e-05!GO:0051325;interphase;8.99214534118469e-05!GO:0000314;organellar small ribosomal subunit;9.47839443818606e-05!GO:0005763;mitochondrial small ribosomal subunit;9.47839443818606e-05!GO:0006613;cotranslational protein targeting to membrane;9.50764526132525e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.00011247283350586!GO:0048471;perinuclear region of cytoplasm;0.000118245344039646!GO:0006099;tricarboxylic acid cycle;0.000120990747871791!GO:0046356;acetyl-CoA catabolic process;0.000120990747871791!GO:0006402;mRNA catabolic process;0.000122707837952143!GO:0009117;nucleotide metabolic process;0.00013261675174039!GO:0000775;chromosome, pericentric region;0.000138773931245614!GO:0004298;threonine endopeptidase activity;0.000140031887572973!GO:0045893;positive regulation of transcription, DNA-dependent;0.000141816198632508!GO:0031982;vesicle;0.000142156883674922!GO:0016853;isomerase activity;0.000154396467126678!GO:0006383;transcription from RNA polymerase III promoter;0.000172809516179435!GO:0031410;cytoplasmic vesicle;0.000187861998280468!GO:0031323;regulation of cellular metabolic process;0.000188077716571727!GO:0005048;signal sequence binding;0.000193570418525167!GO:0031252;leading edge;0.000193570418525167!GO:0044452;nucleolar part;0.000193570418525167!GO:0004674;protein serine/threonine kinase activity;0.000194141993876514!GO:0006350;transcription;0.000213191583278149!GO:0008094;DNA-dependent ATPase activity;0.00021464283324662!GO:0048475;coated membrane;0.000215564384463258!GO:0030117;membrane coat;0.000215564384463258!GO:0045045;secretory pathway;0.000215564384463258!GO:0007243;protein kinase cascade;0.000237615308692371!GO:0007051;spindle organization and biogenesis;0.000243772940772954!GO:0031072;heat shock protein binding;0.000294126936065038!GO:0003729;mRNA binding;0.000305315221098488!GO:0051187;cofactor catabolic process;0.000315782884364733!GO:0009109;coenzyme catabolic process;0.000331958293750403!GO:0006084;acetyl-CoA metabolic process;0.000336195037884232!GO:0032561;guanyl ribonucleotide binding;0.000358329868490253!GO:0019001;guanyl nucleotide binding;0.000358329868490253!GO:0008654;phospholipid biosynthetic process;0.000370455117156663!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000452490925861835!GO:0008361;regulation of cell size;0.000492460658076249!GO:0007264;small GTPase mediated signal transduction;0.000501738325794766!GO:0065007;biological regulation;0.000508879504610629!GO:0006302;double-strand break repair;0.000543907003530655!GO:0005773;vacuole;0.000547263693757535!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000578750708011787!GO:0045454;cell redox homeostasis;0.000599287939862484!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000613279496714968!GO:0016859;cis-trans isomerase activity;0.000662620044348526!GO:0032508;DNA duplex unwinding;0.000665459513605154!GO:0032392;DNA geometric change;0.000665459513605154!GO:0005874;microtubule;0.000667503029607147!GO:0005885;Arp2/3 protein complex;0.00070049446857451!GO:0001558;regulation of cell growth;0.000704000753667626!GO:0003684;damaged DNA binding;0.000711179801187746!GO:0015631;tubulin binding;0.000859971902564942!GO:0000049;tRNA binding;0.00088156240332771!GO:0006401;RNA catabolic process;0.00088156240332771!GO:0016049;cell growth;0.000923551518530139!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000932834104680383!GO:0015399;primary active transmembrane transporter activity;0.000932834104680383!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000932834104680383!GO:0030880;RNA polymerase complex;0.000944927610565757!GO:0004576;oligosaccharyl transferase activity;0.00108220095369082!GO:0008139;nuclear localization sequence binding;0.00108833531561098!GO:0007010;cytoskeleton organization and biogenesis;0.00115584753671369!GO:0008250;oligosaccharyl transferase complex;0.00124462644079596!GO:0051789;response to protein stimulus;0.00130035366169917!GO:0006986;response to unfolded protein;0.00130035366169917!GO:0051252;regulation of RNA metabolic process;0.00130145917405049!GO:0042802;identical protein binding;0.00132178801354283!GO:0000059;protein import into nucleus, docking;0.00133535591253619!GO:0006284;base-excision repair;0.00133542971843821!GO:0045892;negative regulation of transcription, DNA-dependent;0.00134319042545265!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00135532688704228!GO:0005798;Golgi-associated vesicle;0.00136100977741039!GO:0000776;kinetochore;0.00138563830830946!GO:0006352;transcription initiation;0.00140142624862908!GO:0003702;RNA polymerase II transcription factor activity;0.00141682415410552!GO:0030867;rough endoplasmic reticulum membrane;0.00149316003615847!GO:0010468;regulation of gene expression;0.00163963250016488!GO:0006268;DNA unwinding during replication;0.00164064058803405!GO:0048487;beta-tubulin binding;0.00171087938751893!GO:0006275;regulation of DNA replication;0.0017145579575073!GO:0008022;protein C-terminus binding;0.00179549968718047!GO:0030036;actin cytoskeleton organization and biogenesis;0.00184111770164414!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00189109593333208!GO:0016363;nuclear matrix;0.00195702741952265!GO:0033116;ER-Golgi intermediate compartment membrane;0.00200003112878695!GO:0006310;DNA recombination;0.00204622121851003!GO:0065009;regulation of a molecular function;0.00206736111851536!GO:0006414;translational elongation;0.00211787607146456!GO:0015980;energy derivation by oxidation of organic compounds;0.00215729167108804!GO:0051101;regulation of DNA binding;0.00218859905471351!GO:0016197;endosome transport;0.00220756438851813!GO:0003678;DNA helicase activity;0.00222984946999398!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00226122463970195!GO:0008033;tRNA processing;0.00226734513424996!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00227981938021743!GO:0000428;DNA-directed RNA polymerase complex;0.00227981938021743!GO:0016741;transferase activity, transferring one-carbon groups;0.00227981938021743!GO:0000323;lytic vacuole;0.0024185104138286!GO:0005764;lysosome;0.0024185104138286!GO:0016272;prefoldin complex;0.00245752665279051!GO:0006892;post-Golgi vesicle-mediated transport;0.00256472681144975!GO:0003711;transcription elongation regulator activity;0.0026781229594093!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00285941465893533!GO:0051087;chaperone binding;0.00290666061687622!GO:0043492;ATPase activity, coupled to movement of substances;0.0031201185571394!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00312370082284925!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00320290308442707!GO:0006405;RNA export from nucleus;0.00322042192526403!GO:0008168;methyltransferase activity;0.00335303076161612!GO:0019783;small conjugating protein-specific protease activity;0.00349725677682965!GO:0019843;rRNA binding;0.00350725698856518!GO:0030132;clathrin coat of coated pit;0.00356841120516141!GO:0043681;protein import into mitochondrion;0.00371587800016761!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0037556192438229!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0037556192438229!GO:0035258;steroid hormone receptor binding;0.00375603547675234!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0038607121947761!GO:0006338;chromatin remodeling;0.00397890458073203!GO:0006839;mitochondrial transport;0.00416079472977675!GO:0009893;positive regulation of metabolic process;0.00424386997544972!GO:0018196;peptidyl-asparagine modification;0.00427253085817552!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00427253085817552!GO:0019867;outer membrane;0.00443906867820112!GO:0046467;membrane lipid biosynthetic process;0.00450518624491052!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00468033614126423!GO:0043488;regulation of mRNA stability;0.00468543472451501!GO:0043487;regulation of RNA stability;0.00468543472451501!GO:0040029;regulation of gene expression, epigenetic;0.00471329150319986!GO:0043284;biopolymer biosynthetic process;0.00482035271100478!GO:0048518;positive regulation of biological process;0.00488621592820942!GO:0000922;spindle pole;0.00492297461827736!GO:0005684;U2-dependent spliceosome;0.00495193316544489!GO:0046983;protein dimerization activity;0.00495205537823359!GO:0009165;nucleotide biosynthetic process;0.00513144795947868!GO:0004843;ubiquitin-specific protease activity;0.00528164026564072!GO:0008629;induction of apoptosis by intracellular signals;0.00538484272820128!GO:0000786;nucleosome;0.00540771969272353!GO:0040008;regulation of growth;0.00566483469875839!GO:0003746;translation elongation factor activity;0.00577776496755149!GO:0016301;kinase activity;0.00577776496755149!GO:0006607;NLS-bearing substrate import into nucleus;0.00587301342206606!GO:0006818;hydrogen transport;0.00589143592182355!GO:0006289;nucleotide-excision repair;0.0059539728627414!GO:0048500;signal recognition particle;0.00597373555452933!GO:0006611;protein export from nucleus;0.00598758534214445!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00608254036992295!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00608254036992295!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00608254036992295!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00608254036992295!GO:0031968;organelle outer membrane;0.00617959957766562!GO:0016251;general RNA polymerase II transcription factor activity;0.00618221974517567!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00656527880318016!GO:0004527;exonuclease activity;0.00671711641410869!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.006903901406809!GO:0033673;negative regulation of kinase activity;0.006903901406809!GO:0006469;negative regulation of protein kinase activity;0.006903901406809!GO:0032774;RNA biosynthetic process;0.00696700895547666!GO:0015992;proton transport;0.00720871973801849!GO:0006612;protein targeting to membrane;0.00725929747343322!GO:0008234;cysteine-type peptidase activity;0.00732950299164136!GO:0006626;protein targeting to mitochondrion;0.00748257585190254!GO:0030134;ER to Golgi transport vesicle;0.00766804813928583!GO:0022415;viral reproductive process;0.00769997881907466!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00771610870697483!GO:0015002;heme-copper terminal oxidase activity;0.00771610870697483!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00771610870697483!GO:0004129;cytochrome-c oxidase activity;0.00771610870697483!GO:0006351;transcription, DNA-dependent;0.00786173519977738!GO:0051098;regulation of binding;0.00787791857399446!GO:0007052;mitotic spindle organization and biogenesis;0.00796694734565838!GO:0005637;nuclear inner membrane;0.00809638825917912!GO:0017166;vinculin binding;0.00845684471346255!GO:0006091;generation of precursor metabolites and energy;0.00861354757021977!GO:0046474;glycerophospholipid biosynthetic process;0.00888780499622462!GO:0006376;mRNA splice site selection;0.00938480106273108!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00938480106273108!GO:0007030;Golgi organization and biogenesis;0.00946043275701249!GO:0030029;actin filament-based process;0.00946043275701249!GO:0022890;inorganic cation transmembrane transporter activity;0.0100237586320257!GO:0042770;DNA damage response, signal transduction;0.0100583597616517!GO:0005905;coated pit;0.0100951117463341!GO:0006417;regulation of translation;0.0101142980444403!GO:0031901;early endosome membrane;0.0101608497092379!GO:0006891;intra-Golgi vesicle-mediated transport;0.0103866991728925!GO:0030176;integral to endoplasmic reticulum membrane;0.0107990538160306!GO:0004221;ubiquitin thiolesterase activity;0.0110519506608946!GO:0044450;microtubule organizing center part;0.0111840263044853!GO:0030521;androgen receptor signaling pathway;0.0114176586731861!GO:0007017;microtubule-based process;0.0115858931958373!GO:0008312;7S RNA binding;0.0116459569166781!GO:0048468;cell development;0.0117123925113063!GO:0007088;regulation of mitosis;0.0117123925113063!GO:0016044;membrane organization and biogenesis;0.0117244050305312!GO:0006270;DNA replication initiation;0.0120173283118433!GO:0031124;mRNA 3'-end processing;0.0120916088579386!GO:0031625;ubiquitin protein ligase binding;0.0121501537939328!GO:0008287;protein serine/threonine phosphatase complex;0.0121642851752508!GO:0032940;secretion by cell;0.0121764289303666!GO:0016790;thiolester hydrolase activity;0.0131029798173938!GO:0043022;ribosome binding;0.0132875849537334!GO:0005741;mitochondrial outer membrane;0.0135606131279036!GO:0008017;microtubule binding;0.0135891397072238!GO:0019206;nucleoside kinase activity;0.0137271708675203!GO:0031902;late endosome membrane;0.0137271708675203!GO:0000082;G1/S transition of mitotic cell cycle;0.0141785051673011!GO:0046822;regulation of nucleocytoplasmic transport;0.0142717177992536!GO:0006672;ceramide metabolic process;0.0142833059219319!GO:0006984;ER-nuclear signaling pathway;0.0145517356301001!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0152592124237615!GO:0051348;negative regulation of transferase activity;0.0154571678863738!GO:0031325;positive regulation of cellular metabolic process;0.0155281044378836!GO:0004177;aminopeptidase activity;0.0156879846793808!GO:0003725;double-stranded RNA binding;0.0156879846793808!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0156958458259038!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0158892313642909!GO:0043549;regulation of kinase activity;0.0159701693168716!GO:0004532;exoribonuclease activity;0.0162279477365926!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0162279477365926!GO:0030027;lamellipodium;0.0163366680521606!GO:0007093;mitotic cell cycle checkpoint;0.0165011959368722!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0167663450681821!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0167663450681821!GO:0006950;response to stress;0.0169100663684243!GO:0032200;telomere organization and biogenesis;0.0171957944210018!GO:0000723;telomere maintenance;0.0171957944210018!GO:0005832;chaperonin-containing T-complex;0.0172608560604927!GO:0030133;transport vesicle;0.0172608560604927!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0174765613696693!GO:0030127;COPII vesicle coat;0.0174765613696693!GO:0012507;ER to Golgi transport vesicle membrane;0.0174765613696693!GO:0030658;transport vesicle membrane;0.0175116245517812!GO:0051338;regulation of transferase activity;0.0175922685645028!GO:0008092;cytoskeletal protein binding;0.0175922685645028!GO:0000792;heterochromatin;0.0180293266589018!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0180293266589018!GO:0045047;protein targeting to ER;0.0180293266589018!GO:0043414;biopolymer methylation;0.0181529547259952!GO:0046966;thyroid hormone receptor binding;0.0181529547259952!GO:0006595;polyamine metabolic process;0.0181755605880166!GO:0046519;sphingoid metabolic process;0.0183701015687338!GO:0051053;negative regulation of DNA metabolic process;0.0184091278445202!GO:0007006;mitochondrial membrane organization and biogenesis;0.0187582478128619!GO:0050178;phenylpyruvate tautomerase activity;0.0189031124174412!GO:0016791;phosphoric monoester hydrolase activity;0.0189880250046598!GO:0050681;androgen receptor binding;0.0195244074279214!GO:0000910;cytokinesis;0.0197209387034968!GO:0009116;nucleoside metabolic process;0.0201255277430617!GO:0006144;purine base metabolic process;0.0202302651305573!GO:0046483;heterocycle metabolic process;0.0202917848896275!GO:0031326;regulation of cellular biosynthetic process;0.0206148008512224!GO:0046489;phosphoinositide biosynthetic process;0.0207588843228969!GO:0005862;muscle thin filament tropomyosin;0.0208373588374652!GO:0032259;methylation;0.0209782858202752!GO:0007059;chromosome segregation;0.0212670484212493!GO:0008047;enzyme activator activity;0.0215068008715853!GO:0005669;transcription factor TFIID complex;0.0217026912908436!GO:0016311;dephosphorylation;0.0217259078014293!GO:0008632;apoptotic program;0.0217827879895719!GO:0000287;magnesium ion binding;0.0226345523037248!GO:0009889;regulation of biosynthetic process;0.0230380876384028!GO:0031570;DNA integrity checkpoint;0.0231044079636127!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0244858532797092!GO:0005732;small nucleolar ribonucleoprotein complex;0.0247728052055091!GO:0035035;histone acetyltransferase binding;0.025074013804241!GO:0009112;nucleobase metabolic process;0.0257140181926152!GO:0000339;RNA cap binding;0.0257140181926152!GO:0031123;RNA 3'-end processing;0.0262866101590165!GO:0030660;Golgi-associated vesicle membrane;0.0269956263400986!GO:0030518;steroid hormone receptor signaling pathway;0.0269964370277493!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0270089883740687!GO:0045449;regulation of transcription;0.0275662997299486!GO:0043624;cellular protein complex disassembly;0.0277584644453444!GO:0008286;insulin receptor signaling pathway;0.0280378267018804!GO:0004722;protein serine/threonine phosphatase activity;0.0280646198741531!GO:0051287;NAD binding;0.0285151823306247!GO:0007040;lysosome organization and biogenesis;0.0285151823306247!GO:0016584;nucleosome positioning;0.0286142618346856!GO:0005791;rough endoplasmic reticulum;0.0300551602864025!GO:0007265;Ras protein signal transduction;0.0306697330059182!GO:0030503;regulation of cell redox homeostasis;0.0308556502891628!GO:0004518;nuclease activity;0.0310927331598539!GO:0005876;spindle microtubule;0.0313210339160335!GO:0008538;proteasome activator activity;0.03157625608419!GO:0045859;regulation of protein kinase activity;0.0318429040750403!GO:0006730;one-carbon compound metabolic process;0.0321204871604371!GO:0000725;recombinational repair;0.0325215083235042!GO:0000724;double-strand break repair via homologous recombination;0.0325215083235042!GO:0032906;transforming growth factor-beta2 production;0.0333639862701576!GO:0032909;regulation of transforming growth factor-beta2 production;0.0333639862701576!GO:0007346;regulation of progression through mitotic cell cycle;0.0337674287064542!GO:0006354;RNA elongation;0.033788805814597!GO:0030118;clathrin coat;0.0345924111018509!GO:0050790;regulation of catalytic activity;0.0352300181545372!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0364627850314476!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0364627850314476!GO:0030911;TPR domain binding;0.036828174612339!GO:0006740;NADPH regeneration;0.0370048088696727!GO:0006098;pentose-phosphate shunt;0.0370048088696727!GO:0050811;GABA receptor binding;0.0376160574874879!GO:0006301;postreplication repair;0.0376160574874879!GO:0000781;chromosome, telomeric region;0.0378943541499321!GO:0007242;intracellular signaling cascade;0.0384086673515709!GO:0006360;transcription from RNA polymerase I promoter;0.0385615824443216!GO:0005096;GTPase activator activity;0.0385762095465921!GO:0008637;apoptotic mitochondrial changes;0.038863401085712!GO:0030663;COPI coated vesicle membrane;0.0389700562843759!GO:0030126;COPI vesicle coat;0.0389700562843759!GO:0007021;tubulin folding;0.0395846870407309!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0401091043977853!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0401293080251451!GO:0006458;'de novo' protein folding;0.0404524123992527!GO:0051084;'de novo' posttranslational protein folding;0.0404524123992527!GO:0050662;coenzyme binding;0.0406939747574957!GO:0006541;glutamine metabolic process;0.0413932924397665!GO:0007004;telomere maintenance via telomerase;0.0418045143693535!GO:0006778;porphyrin metabolic process;0.0431499307905782!GO:0033013;tetrapyrrole metabolic process;0.0431499307905782!GO:0032984;macromolecular complex disassembly;0.0432608823649359!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0433129890641056!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0436027925138401!GO:0031529;ruffle organization and biogenesis;0.0436446279344882!GO:0000178;exosome (RNase complex);0.0436568350823169!GO:0006497;protein amino acid lipidation;0.0440954448551272!GO:0042769;DNA damage response, detection of DNA damage;0.0443136205822214!GO:0045603;positive regulation of endothelial cell differentiation;0.0443263804683653!GO:0004721;phosphoprotein phosphatase activity;0.0446064475263492!GO:0009124;nucleoside monophosphate biosynthetic process;0.0446130385296513!GO:0009123;nucleoside monophosphate metabolic process;0.0446130385296513!GO:0000123;histone acetyltransferase complex;0.0447571115226956!GO:0004239;methionyl aminopeptidase activity;0.0448514521359752!GO:0016585;chromatin remodeling complex;0.0452241767968976!GO:0043189;H4/H2A histone acetyltransferase complex;0.0453409545541571!GO:0046112;nucleobase biosynthetic process;0.0457091149313107!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.046159736751813!GO:0009967;positive regulation of signal transduction;0.046159736751813!GO:0008156;negative regulation of DNA replication;0.0465254285851922!GO:0019904;protein domain specific binding;0.0466571150572215!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0473218113129457!GO:0009303;rRNA transcription;0.0476380763844245!GO:0022406;membrane docking;0.0483015511808036!GO:0048278;vesicle docking;0.0483015511808036!GO:0031057;negative regulation of histone modification;0.0484025815300738!GO:0035067;negative regulation of histone acetylation;0.0484025815300738!GO:0004680;casein kinase activity;0.0485634048994923!GO:0005869;dynactin complex;0.0486418533445608!GO:0030433;ER-associated protein catabolic process;0.0491454702242926!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0491454702242926!GO:0045792;negative regulation of cell size;0.0493808039025211!GO:0008408;3'-5' exonuclease activity;0.0495263180359292
|sample_id=10604
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=pancreas
|top_motifs=ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.39955210017;FOXQ1:1.31553889067;PAX8:1.27036665934;bHLH_family:1.13112157212;RORA:1.00654195647;HES1:0.944195025049;ONECUT1,2:0.92777929747;PPARG:0.791651367766;ADNP_IRX_SIX_ZHX:0.758573076188;POU6F1:0.716721809383;FOX{F1,F2,J1}:0.699387292829;NFIX:0.676002000231;VSX1,2:0.652470137895;LHX3,4:0.636833245533;TFDP1:0.608792703728;EGR1..3:0.596958764855;NANOG:0.593009951722;ALX1:0.590279344921;TFAP2B:0.572028469362;XCPE1{core}:0.544989533746;E2F1..5:0.536056829629;FOXD3:0.526927366536;BREu{core}:0.514466448385;FOXA2:0.499537106678;TFAP2{A,C}:0.478814274005;POU1F1:0.478409647851;SP1:0.46833088274;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.460480631174;FOS_FOS{B,L1}_JUN{B,D}:0.459713874877;AHR_ARNT_ARNT2:0.432243139084;MYB:0.426223962356;PRRX1,2:0.421310299699;ZFP161:0.414437282642;PDX1:0.413695902722;ZNF148:0.405013267689;HOX{A5,B5}:0.403207486967;NKX2-1,4:0.396976220355;STAT5{A,B}:0.375146439006;NFE2:0.355209722316;AIRE:0.340955346866;HIC1:0.328054912205;CEBPA,B_DDIT3:0.322132724134;FOX{I1,J2}:0.322127842956;BPTF:0.32080611928;HOXA9_MEIS1:0.305176329591;TEF:0.268985396379;TBX4,5:0.268410786719;RBPJ:0.265065489752;NRF1:0.25839088552;FOSL2:0.24299035504;ELK1,4_GABP{A,B1}:0.223031221383;ZBTB16:0.205224186349;NFE2L2:0.18485416958;RFX1:0.181531035588;PAX4:0.177982826738;ZNF143:0.172479704157;SOX5:0.168421498537;REST:0.161400723714;HOX{A6,A7,B6,B7}:0.149064930991;CUX2:0.148974824617;NR6A1:0.143918529719;TLX1..3_NFIC{dimer}:0.140843309047;GATA6:0.133635762164;PBX1:0.133402696209;PAX5:0.129845099208;POU5F1:0.129387548919;T:0.124667026942;PAX1,9:0.112892860341;MYOD1:0.112553545621;ATF4:0.109384365161;LEF1_TCF7_TCF7L1,2:0.108305895809;SOX17:0.104050100598;BACH2:0.0988987308992;TP53:0.090470637389;TEAD1:0.0742901829583;PATZ1:0.0683340866019;HLF:0.0456308128116;MTF1:0.0421720487031;HNF1A:0.0352445370726;ZNF423:0.0301746973688;SOX{8,9,10}:0.0212665469844;GLI1..3:0.0205610682543;FOXM1:0.000330119840703;NFKB1_REL_RELA:-0.0254333670963;HOX{A4,D4}:-0.0299844668996;GTF2A1,2:-0.0418531321984;CDX1,2,4:-0.0422171061781;MED-1{core}:-0.0491715191539;PITX1..3:-0.0509244076971;IKZF2:-0.0540217184388;SNAI1..3:-0.0659282894021;NKX2-3_NKX2-5:-0.0686793806692;NFIL3:-0.0695687151732;FOX{D1,D2}:-0.071395587458;LMO2:-0.0806606769434;ESR1:-0.0816538121828;IRF7:-0.0820005187595;NFY{A,B,C}:-0.100246706078;MEF2{A,B,C,D}:-0.103032703128;OCT4_SOX2{dimer}:-0.105239106318;PAX2:-0.106131256627;HNF4A_NR2F1,2:-0.128894501115;PAX3,7:-0.131386059744;MTE{core}:-0.157933684996;NR5A1,2:-0.171316749343;HAND1,2:-0.176838463869;CDC5L:-0.177062511325;ETS1,2:-0.191990847642;PRDM1:-0.217466967633;ZBTB6:-0.221725958237;GTF2I:-0.224973413021;GFI1:-0.231980854272;NKX2-2,8:-0.236081912349;RXR{A,B,G}:-0.250719177925;ZEB1:-0.263397417539;RXRA_VDR{dimer}:-0.267406692956;ZNF384:-0.269773702754;NR1H4:-0.282332186025;CRX:-0.292072545675;TFAP4:-0.292880503574;SRF:-0.293303208668;NR3C1:-0.297739881891;ATF5_CREB3:-0.30345085149;TFCP2:-0.338483126065;SPI1:-0.339930743589;NHLH1,2:-0.342167564554;PAX6:-0.35257962647;HBP1_HMGB_SSRP1_UBTF:-0.36173732919;EBF1:-0.373244434048;TAL1_TCF{3,4,12}:-0.376179759702;NFATC1..3:-0.383462743163;AR:-0.393017341911;FOXP1:-0.402540523504;FOXL1:-0.411389442716;RUNX1..3:-0.41667190968;SPIB:-0.417830964624;ELF1,2,4:-0.422283367552;HMGA1,2:-0.42397334661;STAT1,3:-0.451345732816;YY1:-0.462558343633;ATF2:-0.466553435001;HSF1,2:-0.469468720554;IKZF1:-0.471054019268;SOX2:-0.476243057603;DMAP1_NCOR{1,2}_SMARC:-0.477327633813;FOXO1,3,4:-0.481215063652;RFX2..5_RFXANK_RFXAP:-0.498117393511;MAZ:-0.50423725354;POU2F1..3:-0.507361348948;XBP1:-0.511193032442;POU3F1..4:-0.537604207949;ESRRA:-0.537936653086;UFEwm:-0.541130738489;MYBL2:-0.586080267163;RREB1:-0.596092038615;EVI1:-0.641714207539;EN1,2:-0.64421406256;STAT2,4,6:-0.652612678867;MYFfamily:-0.665900103773;IRF1,2:-0.66853225194;FOXN1:-0.672165865502;JUN:-0.677047385854;CREB1:-0.700234418402;NFE2L1:-0.702340211552;GFI1B:-0.718501813218;TOPORS:-0.721134258105;NKX3-1:-0.722297154819;GATA4:-0.738570068829;GZF1:-0.742024105709;MZF1:-0.759441819587;ALX4:-0.777827904104;KLF4:-0.795850390588;ZIC1..3:-0.808514241616;ARID5B:-0.809973827181;ZNF238:-0.816229190874;DBP:-0.896699818699;TBP:-0.973447993608;FOXP3:-0.991032817983;NKX6-1,2:-1.00371194983;SREBF1,2:-1.00759796608;HMX1:-1.01975309961;ATF6:-1.18408541729;HIF1A:-1.21042826564;NKX3-2:-1.25397448172;SMAD1..7,9:-1.28090429232;GCM1,2:-1.30983505395;TGIF1:-1.33057381497;SPZ1:-1.33915781362;MAFB:-1.37232047539;EP300:-1.47574161029;TLX2:-1.7352977263;NANOG{mouse}:-1.90031676242
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10604-108F1;search_select_hide=table117:FF:10604-108F1
}}
}}

Latest revision as of 14:30, 3 June 2020

Name:embryonic pancreas cell line:1B2C6
Species:Human (Homo sapiens)
Library ID:CNhs11731
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuepancreas
dev stageNA
sexunknown
age19 week embryo
cell typeunclassifiable
cell line1B2C6
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005594
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11731 CAGE DRX007872 DRR008744
Accession ID Hg19

Library idBAMCTSS
CNhs11731 DRZ000169 DRZ001554
Accession ID Hg38

Library idBAMCTSS
CNhs11731 DRZ011519 DRZ012904
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-1.242954e-4
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.243
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0311
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.00573
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0716
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0716
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.024
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.271
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11731

Jaspar motifP-value
MA0002.20.72
MA0003.10.992
MA0004.10.00183
MA0006.10.764
MA0007.10.162
MA0009.10.892
MA0014.10.34
MA0017.10.709
MA0018.20.624
MA0019.10.463
MA0024.15.9582e-4
MA0025.10.998
MA0027.10.35
MA0028.10.138
MA0029.10.0424
MA0030.10.0678
MA0031.10.466
MA0035.20.014
MA0038.10.927
MA0039.20.0225
MA0040.10.735
MA0041.10.463
MA0042.10.342
MA0043.10.412
MA0046.10.049
MA0047.20.021
MA0048.10.351
MA0050.10.00766
MA0051.10.72
MA0052.10.899
MA0055.10.0473
MA0057.10.945
MA0058.10.041
MA0059.10.251
MA0060.10.108
MA0061.10.314
MA0062.20.678
MA0065.20.303
MA0066.10.337
MA0067.10.604
MA0068.10.0492
MA0069.10.565
MA0070.10.532
MA0071.10.92
MA0072.10.315
MA0073.10.918
MA0074.10.861
MA0076.10.64
MA0077.10.153
MA0078.10.409
MA0079.20.402
MA0080.20.018
MA0081.10.555
MA0083.10.33
MA0084.10.87
MA0087.10.444
MA0088.10.707
MA0090.10.242
MA0091.10.0526
MA0092.10.143
MA0093.10.00377
MA0099.24.7538e-13
MA0100.10.692
MA0101.10.257
MA0102.20.182
MA0103.10.375
MA0104.20.0865
MA0105.10.00118
MA0106.10.496
MA0107.10.579
MA0108.20.189
MA0111.10.916
MA0112.20.0262
MA0113.10.312
MA0114.10.256
MA0115.10.0137
MA0116.10.00241
MA0117.10.217
MA0119.10.943
MA0122.10.559
MA0124.10.483
MA0125.10.953
MA0131.10.145
MA0135.10.47
MA0136.10.214
MA0137.20.413
MA0138.20.569
MA0139.10.64
MA0140.10.0407
MA0141.10.901
MA0142.10.639
MA0143.10.611
MA0144.10.459
MA0145.10.345
MA0146.10.73
MA0147.10.056
MA0148.10.0239
MA0149.10.0379
MA0150.10.365
MA0152.10.625
MA0153.10.524
MA0154.10.0355
MA0155.10.364
MA0156.10.363
MA0157.10.783
MA0159.10.931
MA0160.10.305
MA0162.10.204
MA0163.10.00106
MA0164.10.508
MA0258.10.195
MA0259.10.253



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11731

Novel motifP-value
10.227
100.2
1000.744
1010.631
1020.156
1030.47
1040.93
1050.302
1060.0517
1070.79
1080.956
1090.582
110.0194
1100.298
1110.177
1120.189
1130.0817
1140.71
1150.497
1160.314
1170.859
1180.502
1190.723
120.453
1200.568
1210.822
1220.186
1230.745
1240.527
1250.448
1260.919
1270.782
1280.0653
1290.453
130.87
1300.00938
1310.0131
1320.479
1330.0592
1340.116
1350.00197
1360.319
1370.326
1380.708
1390.623
140.78
1400.353
1410.776
1420.528
1430.807
1440.235
1450.338
1460.981
1470.0717
1480.613
1490.148
150.104
1500.689
1510.555
1520.921
1530.41
1540.595
1550.342
1560.86
1570.162
1580.904
1590.878
160.437
1600.249
1610.621
1620.726
1630.933
1640.209
1650.988
1660.309
1670.349
1680.636
1690.245
170.701
180.966
190.0411
20.19
200.0848
210.735
220.612
230.501
240.787
250.245
260.234
270.166
280.457
290.0773
30.136
300.894
310.352
324.9331e-5
330.339
340.722
350.116
360.585
370.142
380.796
390.357
40.173
400.301
410.735
420.679
430.151
440.0646
450.662
460.0523
470.431
480.42
490.543
50.291
500.274
510.85
520.508
530.141
540.919
550.844
560.495
570.298
580.0258
590.0317
60.0925
600.235
610.249
620.00267
630.909
640.301
650.472
660.0164
670.424
680.714
690.961
70.773
700.583
710.0506
720.00753
730.834
740.299
750.476
760.721
770.0525
780.984
790.00255
80.441
800.987
810.00921
820.111
830.98
840.139
850.0614
860.225
870.356
880.189
890.0401
90.477
900.955
910.00533
920.561
930.419
940.727
950.759
960.305
970.333
980.432
990.916



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11731


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100669 (embryonic cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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