FFCP PHASE1:Mm9::chr14:52533023..52533066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29811 | |EntrezGene=29811 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2576 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QYG0 | |UniProt=Q9QYG0 | ||
|association_with_transcript=96bp_to_ENSMUST00000004673,ENSMUST00000111632,NM_001145959,NM_013864,uc007tnk.2,uc007tnl.2_5end | |association_with_transcript=96bp_to_ENSMUST00000004673,ENSMUST00000111632,NM_001145959,NM_013864,uc007tnk.2,uc007tnl.2_5end | ||
|cluster_id=chr14:52533023..52533066,- | |||
|description=CAGE_peak_1_at_Ndrg2_5end | |description=CAGE_peak_1_at_Ndrg2_5end | ||
|id=chr14:52533023..52533066,- | |id=chr14:52533023..52533066,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!3.59e-20!122;UBERON:0000025!2.19e-19!114;UBERON:0001017!2.88e-14!73;UBERON:0005743!2.88e-14!73;UBERON:0000073!4.40e-13!75;UBERON:0001016!4.40e-13!75;UBERON:0004121!1.40e-12!102;UBERON:0000924!1.40e-12!102;UBERON:0006601!1.40e-12!102;UBERON:0001049!1.63e-11!52;UBERON:0005068!1.63e-11!52;UBERON:0006241!1.63e-11!52;UBERON:0007135!1.63e-11!52;UBERON:0000955!9.56e-11!50;UBERON:0006238!9.56e-11!50;UBERON:0002616!2.11e-10!49;UBERON:0002346!6.73e-10!71;UBERON:0003075!6.73e-10!71;UBERON:0007284!6.73e-10!71;UBERON:0003914!1.06e-09!47;UBERON:0002020!3.29e-09!34;UBERON:0000468!4.12e-09!333;UBERON:0000033!6.22e-09!63;UBERON:0000477!1.34e-07!154;UBERON:0000479!2.40e-07!349;UBERON:0002791!2.74e-07!29;UBERON:0003528!2.74e-07!29;UBERON:0001893!2.74e-07!29;UBERON:0003080!4.83e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.67e-20,122;UBERON:0000025,2.24e-19,114;UBERON:0010314,5.03e-16,92;UBERON:0001017,2.82e-14,73;UBERON:0001016,4.95e-13,75;UBERON:0000073,2.11e-12,54;UBERON:0004121,1.29e-11,95;UBERON:0000924,1.29e-11,95;UBERON:0006601,1.29e-11,95;UBERON:0001049,1.60e-11,52;UBERON:0005068,1.60e-11,52;UBERON:0006241,1.60e-11,52;UBERON:0007135,1.60e-11,52;UBERON:0003914,1.10e-09,47;UBERON:0000955,2.17e-09,47;UBERON:0006238,2.17e-09,47;UBERON:0010371,2.49e-09,73;UBERON:0002020,3.24e-09,34;UBERON:0002346,3.90e-09,64;UBERON:0003075,3.90e-09,64;UBERON:0007284,3.90e-09,64;UBERON:0002616,4.67e-09,46;UBERON:0003528,2.71e-07,29;UBERON:0002791,2.71e-07,29;UBERON:0001893,2.71e-07,29;UBERON:0000479,3.86e-07,349;UBERON:0003080,4.78e-07,40 | |||
|phase1_expression=25.3035178425574,6.2815573375085,6.82498859084304,6.95667686005709,3.00537437967808,3.3575854382378,2.80335168714631,9.03863264091034,1.267098499365,2.57470978954193,0.856089841127525,0.558405112967355,4.96482116800497,8.04267702254776,0.666219523631325,0.404950534779652,0,0.473193248037357,0.137114433605739,0,52.5567533133611,0.198581902401771,0.261199789138935,5.59973479776923,10.0940083669555,4.01962374880514,5.59990595006797,5.60225204983311,22.0427166569394,12.0974462284767,6.87364583031445,2.54012269383853,2.46025915033828,0,6.35473563452804,6.31691652362271,6.32925004413344,0.837063261473815,0,0,0,0,0,0.125896817975577,0.608261587317087,3.67093504323363,43.0315239391422,82.8495594245697,95.3438033067608,87.2990246843532,85.1117443482204,87.6890642626327,0.167782606057736,3.62681071005672,6.04968838456435,27.0122407837744,38.1089475118546,47.9575045818021,28.9312539029225,29.6234948392338,25.9870875437533,15.9256930072492,31.1253178638899,0.449949858640699,0.988866362566974,0.7104801149461,61.418022656273,98.359886162318,26.9592992002042,33.0764548912642,26.2906201689228,328.784283048778,297.289056120872,24.9881230398506,22.4278402182673,30.3342199581307,179.488886029004,263.291291131657,270.501105064245,30.7295050411352,30.1909223887952,36.4639359389732,275.832803013364,224.54228140264,247.838757893986,159.983321912202,167.856211662142,57.9702276516685,0.908714319998209,7.70829913089212,9.56552812715537,322.65895386802,490.939302936996,737.234559777258,888.244362650964,988.347312936722,271.75995295494,0.340860645156116,0.519572009205738,0.70667914902068,53.2388126755852,0,0,0,17.9687564039308,14.1881524666055,15.1657333504435,234.876240582106,8.80388804400384,85.5026721013391,16.4811060427829,37.1447883540812,45.4312529594435,45.9704053685499,63.9682566818234,93.7472771319379,9.88779870937496,203.740493900156,98.191771266436,60.0155013304888,176.894056286775,111.036432967966,29.8226817948995,225.14843290188,197.298797818275,8.17462576667492,0.718890747035522,0,0.127070227073065,294.937768988096,223.26029417549,64.0837195775608,197.638252058618,161.867884490099,278.228191665251,233.627418817571,19.8586759508117,82.8550424263219,50.0391061698676,46.0867664391378,5.72529949035896,6.43725892413724,6.66229880279792,12.5084998803643,15.6483948048054,18.9608306021578,19.021450085625,38.2880988693743,1.29340795759705,7.37513712654495,14.0760899331159,16.4396799320681,22.2437799380478,35.1734688187388,32.3077954160471,4.77682240364384,0,1.02939162845886,1.98914449576915,47.0175503655589,46.436159876257,59.4204802821349,84.9913600750905,85.3956765783733,111.997923956237,148.12412280601,176.523898120949,199.66873544786,156.825536967547,246.907865974959,385.482189390544,424.126163520889,409.900065248392,474.151277480393,218.701546506692,81.397548392014,5.28670052774077,15.3381328664856,6.82522401712749,7.19933682767359,10.4382643670896,12.7060620512706,12.008414367623,13.6962450801043,18.9811624617805,15.811099653505,26.138861715228,20.2935601481974,18.7165523634355,9.88701349519644,21.8299430373441,35.248005366023,5.50036912763937,7.99739588268102,9.01661885384643,12.2190796707189,18.8133912552597,27.7036488566758,30.4167743567678,57.4203475640652,49.9255954535572,58.4902556989334,577.489717565766,6.50695912292767,7.86235980452812,10.3436571697033,14.2002084971952,22.1882986972223,62.8925853900107,163.41140607206,233.798997009601,242.437727845076,257.345089683965,291.758502972107,412.201766184335,571.08084303842,548.776687963529,567.35358112332,26.6044593839911,6.44270800019648,7.98528384565927,7.46878377410828,10.7957514212711,27.9735449927832,42.3717680777104,38.6364622758442,10.0886492227962,8.858587585951,15.3076577911188,34.9028860344522,28.8383919716046,46.1430496875022,3.01582567878545,6.52686820582452,16.2282210096282,23.730560182207,288.991061978026,257.982922189439,0,601.385748600816,38.4920027687833,34.7490482424008,51.7016154558717,39.6688204601236,39.6581639866662,52.369158195934,36.4329631507405,35.65521466518,54.5497133566202,146.201198971922,53.7952922939338,24.9291845134157,20.8495307972577,37.9431282836832,9.2921596837974,5.09839335925461,9.97667737983678,26.0275010063139,34.5503214670504,29.821209350561,25.3259727304857,19.9943551212628,27.8067955140083,29.0753817300951,10.5418608574999,12.3762651897824,10.5536277783674,8.10274923140896,12.5477923269272,12.8602221018955,20.2167866352192,43.7003603125073,37.5171766972836,51.7590413494819,4.22409074514679,1.69465656691056,16.7601582521771,112.122652000206,48.1163991553799,35.1624352331149,39.5122458650382,39.0655341393246,12.2421951384537,342.480532813411,1.70870880797853,6.60437977482312,5.55583582109135,3.76736914009382,1.91371918809435,1.60144721244566,3.39956859987711,2.37917468950219,4.28419918793714,36.2774834845743,4.27053591334533,13.8257237646257,23.0051375950437,34.9177454344163,32.9727471256728,38.0317456805194,56.9482309947565,44.236754195301,35.7737326285348,52.8138416123887,7.32800820289447,4.9340460194513,7.942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| |phase1_expression=25.3035178425574,6.2815573375085,6.82498859084304,6.95667686005709,3.00537437967808,3.3575854382378,2.80335168714631,9.03863264091034,1.267098499365,2.57470978954193,0.856089841127525,0.558405112967355,4.96482116800497,8.04267702254776,0.666219523631325,0.404950534779652,0,0.473193248037357,0.137114433605739,0,52.5567533133611,0.198581902401771,0.261199789138935,5.59973479776923,10.0940083669555,4.01962374880514,5.59990595006797,5.60225204983311,22.0427166569394,12.0974462284767,6.87364583031445,2.54012269383853,2.46025915033828,0,6.35473563452804,6.31691652362271,6.32925004413344,0.837063261473815,0,0,0,0,0,0.125896817975577,0.608261587317087,3.67093504323363,43.0315239391422,82.8495594245697,95.3438033067608,87.2990246843532,85.1117443482204,87.6890642626327,0.167782606057736,3.62681071005672,6.04968838456435,27.0122407837744,38.1089475118546,47.9575045818021,28.9312539029225,29.6234948392338,25.9870875437533,15.9256930072492,31.1253178638899,0.449949858640699,0.988866362566974,0.7104801149461,61.418022656273,98.359886162318,26.9592992002042,33.0764548912642,26.2906201689228,328.784283048778,297.289056120872,24.9881230398506,22.4278402182673,30.3342199581307,179.488886029004,263.291291131657,270.501105064245,30.7295050411352,30.1909223887952,36.4639359389732,275.832803013364,224.54228140264,247.838757893986,159.983321912202,167.856211662142,57.9702276516685,0.908714319998209,7.70829913089212,9.56552812715537,322.65895386802,490.939302936996,737.234559777258,888.244362650964,988.347312936722,271.75995295494,0.340860645156116,0.519572009205738,0.70667914902068,53.2388126755852,0,0,0,17.9687564039308,14.1881524666055,15.1657333504435,234.876240582106,8.80388804400384,85.5026721013391,16.4811060427829,37.1447883540812,45.4312529594435,45.9704053685499,63.9682566818234,93.7472771319379,9.88779870937496,203.740493900156,98.191771266436,60.0155013304888,176.894056286775,111.036432967966,29.8226817948995,225.14843290188,197.298797818275,8.17462576667492,0.718890747035522,0,0.127070227073065,294.937768988096,223.26029417549,64.0837195775608,197.638252058618,161.867884490099,278.228191665251,233.627418817571,19.8586759508117,82.8550424263219,50.0391061698676,46.0867664391378,5.72529949035896,6.43725892413724,6.66229880279792,12.5084998803643,15.6483948048054,18.9608306021578,19.021450085625,38.2880988693743,1.29340795759705,7.37513712654495,14.0760899331159,16.4396799320681,22.2437799380478,35.1734688187388,32.3077954160471,4.77682240364384,0,1.02939162845886,1.98914449576915,47.0175503655589,46.436159876257,59.4204802821349,84.9913600750905,85.3956765783733,111.997923956237,148.12412280601,176.523898120949,199.66873544786,156.825536967547,246.907865974959,385.482189390544,424.126163520889,409.900065248392,474.151277480393,218.701546506692,81.397548392014,5.28670052774077,15.3381328664856,6.82522401712749,7.19933682767359,10.4382643670896,12.7060620512706,12.008414367623,13.6962450801043,18.9811624617805,15.811099653505,26.138861715228,20.2935601481974,18.7165523634355,9.88701349519644,21.8299430373441,35.248005366023,5.50036912763937,7.99739588268102,9.01661885384643,12.2190796707189,18.8133912552597,27.7036488566758,30.4167743567678,57.4203475640652,49.9255954535572,58.4902556989334,577.489717565766,6.50695912292767,7.86235980452812,10.3436571697033,14.2002084971952,22.1882986972223,62.8925853900107,163.41140607206,233.798997009601,242.437727845076,257.345089683965,291.758502972107,412.201766184335,571.08084303842,548.776687963529,567.35358112332,26.6044593839911,6.44270800019648,7.98528384565927,7.46878377410828,10.7957514212711,27.9735449927832,42.3717680777104,38.6364622758442,10.0886492227962,8.858587585951,15.3076577911188,34.9028860344522,28.8383919716046,46.1430496875022,3.01582567878545,6.52686820582452,16.2282210096282,23.730560182207,288.991061978026,257.982922189439,0,601.385748600816,38.4920027687833,34.7490482424008,51.7016154558717,39.6688204601236,39.6581639866662,52.369158195934,36.4329631507405,35.65521466518,54.5497133566202,146.201198971922,53.7952922939338,24.9291845134157,20.8495307972577,37.9431282836832,9.2921596837974,5.09839335925461,9.97667737983678,26.0275010063139,34.5503214670504,29.821209350561,25.3259727304857,19.9943551212628,27.8067955140083,29.0753817300951,10.5418608574999,12.3762651897824,10.5536277783674,8.10274923140896,12.5477923269272,12.8602221018955,20.2167866352192,43.7003603125073,37.5171766972836,51.7590413494819,4.22409074514679,1.69465656691056,16.7601582521771,112.122652000206,48.1163991553799,35.1624352331149,39.5122458650382,39.0655341393246,12.2421951384537,342.480532813411,1.70870880797853,6.60437977482312,5.55583582109135,3.76736914009382,1.91371918809435,1.60144721244566,3.39956859987711,2.37917468950219,4.28419918793714,36.2774834845743,4.27053591334533,13.8257237646257,23.0051375950437,34.9177454344163,32.9727471256728,38.0317456805194,56.9482309947565,44.236754195301,35.7737326285348,52.8138416123887,7.32800820289447,4.9340460194513,7.94200754194069,23.3341426012857,21.8280101677366,24.8365504471444,29.57402413873,18.7494314175288,8.17902886520545,5.55643477899814,71.7194715582085,9.16432249821717,6.68993210457542,6.98434508720825,5.06691209613401,8.41425469637163,13.510332125126,4.56742708175882,7.23678683155428,8.4811817956444,6.17275133905499,8.26774718122092,7.79663045918019,6.06134602334076,10.1682904897965,330.799629694593,1.55390167361845,4.21655126064536,0.503653849092235,164.983913303491,12.5747258552292,23.6265595304772,36.6569928225203,9.02829787263654,155.87150856231,161.574158014019,169.577071978061,154.667864109319,180.176702699679,185.826898757866,176.180872560501,176.976232867119,180.350678775713,173.967464748611,3.52876981786201,6.78342284781753,12.9757540373142,26.7417388775123,20.9613162627982,38.607136774503,55.1171884948006,53.5691148821125,50.384315905915,67.7228527526977,62.8628663727795,60.9263082677026,62.8334515122911,59.0311905172895,61.5133872514618,61.9181798667996,68.951173937189,63.6600427530227,72.527118541382,63.5899334980596,48.3445645863436,51.2905079800485,53.4097065481999,56.8304489032405,55.6186438254604,55.9302558163982,59.8174471293966,57.3491970934497,65.1859746460136,43.7690971893036,59.0802390258387,61.2697880376005,51.9723424825506,63.988915409804,55.3641973515876,45.2157146067682,74.1563198771945,83.1550979166914,125.102569173024,92.2072131919575,131.005327125538 | ||
|short_description=p1@Ndrg2 | |short_description=p1@Ndrg2 | ||
}} | }} |
Latest revision as of 00:59, 26 September 2015
Short description: | p1@Ndrg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndrg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2576 |
Association with transcript: | 96bp_to_ENSMUST00000004673, ENSMUST00000111632, NM_001145959, NM_013864, uc007tnk.2, uc007tnl.2_5end |
EntrezGene: | Ndrg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.67e-20 | 122 |
tube | 2.24e-19 | 114 |
structure with developmental contribution from neural crest | 5.03e-16 | 92 |
central nervous system | 2.82e-14 | 73 |
nervous system | 4.95e-13 | 75 |
regional part of nervous system | 2.11e-12 | 54 |
ectoderm-derived structure | 1.29e-11 | 95 |
ectoderm | 1.29e-11 | 95 |
presumptive ectoderm | 1.29e-11 | 95 |
neural tube | 1.60e-11 | 52 |
neural rod | 1.60e-11 | 52 |
future spinal cord | 1.60e-11 | 52 |
neural keel | 1.60e-11 | 52 |
epithelial tube | 1.10e-09 | 47 |
brain | 2.17e-09 | 47 |
future brain | 2.17e-09 | 47 |
ecto-epithelium | 2.49e-09 | 73 |
gray matter | 3.24e-09 | 34 |
neurectoderm | 3.90e-09 | 64 |
neural plate | 3.90e-09 | 64 |
presumptive neural plate | 3.90e-09 | 64 |
regional part of brain | 4.67e-09 | 46 |
brain grey matter | 2.71e-07 | 29 |
regional part of telencephalon | 2.71e-07 | 29 |
telencephalon | 2.71e-07 | 29 |
tissue | 3.86e-07 | 349 |
anterior neural tube | 4.78e-07 | 40 |