FFCP PHASE1:Hg19::chr11:31832207..31832226,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=0bp_to_ENST00000379109,uc001mtd.3_5end | |association_with_transcript=0bp_to_ENST00000379109,uc001mtd.3_5end | ||
|cluster_id=chr11:31832207..31832226,- | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_12_at_PAX6_5end | |description=CAGE_peak_12_at_PAX6_5end | ||
|id=chr11:31832207..31832226,- | |id=chr11:31832207..31832226,- | ||
|ontology_enrichment_celltype=CL:0000128!1.25e-11!7;CL:0000126!1.25e-11!7;CL:0000127!1.25e-11!7;CL:0002453!1.25e-11!7;CL:0000133!1.07e-08!59;CL:0002319!1.24e-08!25;CL:0000095!5.06e-08!17;CL:0000123!5.06e-08!17;CL:0000221!5.70e-07!71 | |ontology_enrichment_celltype=CL:0000128!1.25e-11!7;CL:0000126!1.25e-11!7;CL:0000127!1.25e-11!7;CL:0002453!1.25e-11!7;CL:0000133!1.07e-08!59;CL:0002319!1.24e-08!25;CL:0000095!5.06e-08!17;CL:0000123!5.06e-08!17;CL:0000221!5.70e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.14e-29;3!CL:0000067;5.14e-29;3!CL:0005012;5.14e-29;3!CL:0002304;5.14e-29;3!CL:0000075;3.04e-12;27!CL:0000342;7.43e-11;1!CL:0002565;7.43e-11;1!CL:0000306;1.86e-10;4!CL:0002222;1.86e-10;4!CL:0002224;1.86e-10;4!CL:0000710;8.24e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.98e-29,3;CL:0000067,1.98e-29,3;CL:0005012,1.98e-29,3;CL:0002304,1.98e-29,3;CL:0000075,2.70e-12,27;CL:0000342,1.77e-10,1;CL:0002565,1.77e-10,1;CL:0000306,2.25e-10,4;CL:0002222,2.25e-10,4;CL:0002224,2.25e-10,4;CL:0000710,6.89e-08,20;CL:0000133,5.87e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.63e-11!143;DOID:305!1.05e-07!106;DOID:162!1.28e-07!235;DOID:14566!1.41e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:154;5.91e-20;2!DOID:4236;5.91e-20;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.60e-20,2;DOID:4236,9.60e-20,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!6.45e-30!90;UBERON:0003075!3.02e-29!86;UBERON:0007284!3.02e-29!86;UBERON:0001049!2.03e-25!57;UBERON:0005068!2.03e-25!57;UBERON:0006241!2.03e-25!57;UBERON:0007135!2.03e-25!57;UBERON:0005743!1.33e-23!86;UBERON:0000073!1.87e-23!94;UBERON:0001016!1.87e-23!94;UBERON:0003056!3.05e-22!61;UBERON:0001017!2.68e-21!82;UBERON:0002616!5.78e-21!59;UBERON:0000955!9.29e-20!69;UBERON:0006238!9.29e-20!69;UBERON:0000033!1.42e-16!123;UBERON:0002020!3.23e-16!34;UBERON:0003528!3.23e-16!34;UBERON:0000924!3.74e-16!173;UBERON:0006601!3.74e-16!173;UBERON:0001893!5.08e-16!34;UBERON:0004121!1.94e-15!169;UBERON:0002791!2.94e-15!33;UBERON:0000153!3.67e-15!129;UBERON:0007811!3.67e-15!129;UBERON:0002780!3.71e-15!41;UBERON:0001890!3.71e-15!41;UBERON:0006240!3.71e-15!41;UBERON:0003080!1.23e-14!42;UBERON:0001869!6.80e-14!32;UBERON:0003076!4.31e-13!15;UBERON:0003057!4.31e-13!15;UBERON:0007625!8.80e-12!11;UBERON:0004733!9.69e-12!12;UBERON:0002028!9.69e-12!12;UBERON:0007277!9.69e-12!12;UBERON:0004732!1.21e-10!13;UBERON:0000956!1.52e-10!25;UBERON:0000203!1.52e-10!25;UBERON:0000970!6.05e-10!20;UBERON:0002104!2.59e-09!21;UBERON:0000019!8.21e-09!19;UBERON:0000047!8.21e-09!19;UBERON:0004088!8.21e-09!19;UBERON:0003072!8.21e-09!19;UBERON:0003071!8.21e-09!19;UBERON:0004128!8.21e-09!19;UBERON:0000020!3.20e-08!23;UBERON:0000488!4.42e-08!4;UBERON:0002680!4.95e-08!9;UBERON:0001895!4.95e-08!9;UBERON:0010092!4.95e-08!9;UBERON:0001032!9.57e-08!24;UBERON:0004456!9.57e-08!24;UBERON:0001456!1.07e-07!21;UBERON:0002619!1.60e-07!22;UBERON:0002308!1.72e-07!9;UBERON:0000125!1.72e-07!9;UBERON:0001801!4.58e-07!14;UBERON:0001950!5.40e-07!20;UBERON:0002037!8.87e-07!6;UBERON:0006215!8.87e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.51e-38;4!UBERON:0007625;1.46e-30;11!UBERON:0001778;5.14e-29;3!UBERON:0001775;5.14e-29;3!UBERON:0002203;1.64e-25;6!UBERON:0001768;1.64e-25;6!UBERON:0002200;1.64e-25;6!UBERON:0001801;5.94e-24;14!UBERON:0000019;1.46e-17;19!UBERON:0000047;1.46e-17;19!UBERON:0004088;1.46e-17;19!UBERON:0010230;1.46e-17;19!UBERON:0000970;1.15e-16;20!UBERON:0002104;7.46e-16;21!UBERON:0001456;7.46e-16;21!UBERON:0000020;1.92e-14;23!UBERON:0006876;4.76e-14;11!UBERON:0001032;7.98e-14;24!UBERON:0004456;7.98e-14;24!UBERON:0002506;7.43e-11;1!UBERON:0001769;7.43e-11;1!UBERON:0010371;1.17e-10;31!UBERON:0010077;1.86e-10;4!UBERON:0005389;1.86e-10;4!UBERON:0000484;1.86e-10;4!UBERON:0000965;1.86e-10;4!UBERON:0001803;1.86e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,4.15e-38,4;UBERON:0007625,1.72e-30,11;UBERON:0001778,1.98e-29,3;UBERON:0001775,1.98e-29,3;UBERON:0002203,1.55e-25,6;UBERON:0001768,1.55e-25,6;UBERON:0002200,1.55e-25,6;UBERON:0001801,6.75e-24,14;UBERON:0000019,1.26e-16,20;UBERON:0000047,1.26e-16,20;UBERON:0010312,1.26e-16,20;UBERON:0004088,1.26e-16,20;UBERON:0010230,1.26e-16,20;UBERON:0003072,1.26e-16,20;UBERON:0004128,1.26e-16,20;UBERON:0003071,1.26e-16,20;UBERON:0000970,8.11e-16,21;UBERON:0002104,8.11e-16,21;UBERON:0001456,4.42e-15,22;UBERON:0006876,4.62e-14,11;UBERON:0000020,8.59e-14,24;UBERON:0001032,8.59e-14,24;UBERON:0004456,8.59e-14,24;UBERON:0003075,4.18e-12,82;UBERON:0007284,4.18e-12,82;UBERON:0002346,1.80e-11,86;UBERON:0005085,1.38e-10,31;UBERON:0002506,1.77e-10,1;UBERON:0001769,1.77e-10,1;UBERON:0010077,2.25e-10,4;UBERON:0005389,2.25e-10,4;UBERON:0000484,2.25e-10,4;UBERON:0002546,2.25e-10,4;UBERON:0000965,2.25e-10,4;UBERON:0001803,2.25e-10,4;UBERON:0003073,2.25e-10,4;UBERON:0005426,2.25e-10,4;UBERON:0010371,3.24e-09,104;UBERON:0003056,8.68e-09,61;UBERON:0010314,2.28e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,1.42800483870977,0.626909442956176,0.286235987131057,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,1.55210578223795,1.66886092816939,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,1.15930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.568272293612826,0,0,0,0,0.281338832821026,1.44701316529778,0,0,0,0,0.755798243562828,0.613612095012929,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,1.04174996959975,0,0.60298219312704,0,0.110579259931225,0.591095237907095,0,0.544692317594951,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,1.18608451472249,0.370691816839509,0.626531697032732,0.539209063845416,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,0.60129367765797,0.414752765588989,0,0,0,0,0,0,0,0,0.34823682632161,0,0.687944129886466,0.387025325156341,0.438535902517113,0.0821154570532092,0,0,0.677942222341597,0.137041924646751,0.397429223405979,0.189932387867636,0.195551382734803,0,0,0,0.144090417154106,17.0659528287214,0,0,0.49701014226173,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,1.14681839138014,0.332787154610557,0.310482014706917,0,0,0,0,0.705797459094515,0.468334905806882,0.579684114443301,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0.226705925512272,0,0,0,0,0,1.06013487567529,0,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,1.31043939538565,0.245772908753719,0,0,0.213383459388282,0,0,0.184105950251841,0.139879507719444,1.24415452006595,0,0.215649622793364,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.739280431085226,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.175871244359621,0.383287282918786,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.444925607568277,0,0.157115589916002,0,0,0.215927591218621,0,0.500335809236594,0,0,0.695433089210318,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,11.297408623869,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.430018749454354,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,1.42800483870977,0.626909442956176,0.286235987131057,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13441780596881,1.55210578223795,1.66886092816939,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,1.15930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.568272293612826,0,0,0,0,0.281338832821026,1.44701316529778,0,0,0,0,0.755798243562828,0.613612095012929,0,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0,0,1.04174996959975,0,0.60298219312704,0,0.110579259931225,0.591095237907095,0,0.544692317594951,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,1.18608451472249,0.370691816839509,0.626531697032732,0.539209063845416,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,0.60129367765797,0.414752765588989,0,0,0,0,0,0,0,0,0.34823682632161,0,0.687944129886466,0.387025325156341,0.438535902517113,0.0821154570532092,0,0,0.677942222341597,0.137041924646751,0.397429223405979,0.189932387867636,0.195551382734803,0,0,0,0.144090417154106,17.0659528287214,0,0,0.49701014226173,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,1.14681839138014,0.332787154610557,0.310482014706917,0,0,0,0,0.705797459094515,0.468334905806882,0.579684114443301,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0.226705925512272,0,0,0,0,0,1.06013487567529,0,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,1.31043939538565,0.245772908753719,0,0,0.213383459388282,0,0,0.184105950251841,0.139879507719444,1.24415452006595,0,0.215649622793364,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.739280431085226,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.175871244359621,0.383287282918786,0,0.336283722218824,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.444925607568277,0,0.157115589916002,0,0,0.215927591218621,0,0.500335809236594,0,0,0.695433089210318,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,11.297408623869,0,0,0,0,0,0.470317296361523,0,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.430018749454354,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p12@PAX6 | |short_description=p12@PAX6 | ||
}} | }} |
Latest revision as of 14:54, 17 September 2015
Short description: | p12@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PAX6_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 0bp_to_ENST00000379109, uc001mtd.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.98e-29 | 3 |
ciliated epithelial cell | 1.98e-29 | 3 |
multi-ciliated epithelial cell | 1.98e-29 | 3 |
non-pigmented ciliary epithelial cell | 1.98e-29 | 3 |
columnar/cuboidal epithelial cell | 2.70e-12 | 27 |
pigment cell (sensu Vertebrata) | 1.77e-10 | 1 |
iris pigment epithelial cell | 1.77e-10 | 1 |
crystallin accumulating cell | 2.25e-10 | 4 |
vertebrate lens cell | 2.25e-10 | 4 |
lens epithelial cell | 2.25e-10 | 4 |
neurecto-epithelial cell | 6.89e-08 | 20 |
neurectodermal cell | 5.87e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.60e-20 | 2 |
carcinosarcoma | 9.60e-20 | 2 |