FFCP PHASE1:Mm9::chr14:71289906..71289937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14586 | |EntrezGene=14586 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UUD8,Q3UET6,O08842 | |UniProt=Q3UUD8,Q3UET6,O08842 | ||
|association_with_transcript=0bp_to_ENSMUST00000022699,NM_008115,uc007uoz.1,uc007upa.1,uc007upb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000022699,NM_008115,uc007uoz.1,uc007upa.1,uc007upb.1_5end | ||
|cluster_id=chr14:71289906..71289937,+ | |||
|description=CAGE_peak_1_at_Gfra2_5end | |description=CAGE_peak_1_at_Gfra2_5end | ||
|id=chr14:71289906..71289937,+ | |id=chr14:71289906..71289937,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.02e-13!102;UBERON:0000924!7.02e-13!102;UBERON:0006601!7.02e-13!102;UBERON:0000073!1.07e-09!75;UBERON:0001016!1.07e-09!75;UBERON:0000468!4.16e-09!333;UBERON:0001017!8.59e-09!73;UBERON:0005743!8.59e-09!73;UBERON:0002346!2.44e-08!71;UBERON:0003075!2.44e-08!71;UBERON:0007284!2.44e-08!71;UBERON:0002048!1.91e-07!14;UBERON:0000117!1.91e-07!14;UBERON:0000171!1.91e-07!14;UBERON:0000170!1.91e-07!14;UBERON:0005597!1.91e-07!14;UBERON:0000118!1.91e-07!14;UBERON:0002021!2.66e-07!10;UBERON:0000411!2.66e-07!10;UBERON:0001950!2.66e-07!10;UBERON:0001049!3.80e-07!52;UBERON:0005068!3.80e-07!52;UBERON:0006241!3.80e-07!52;UBERON:0007135!3.80e-07!52;UBERON:0000033!5.50e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.25e-13,95;UBERON:0000924,9.25e-13,95;UBERON:0006601,9.25e-13,95;UBERON:0010371,6.90e-11,73;UBERON:0001016,1.50e-10,75;UBERON:0001017,1.47e-09,73;UBERON:0002346,1.35e-08,64;UBERON:0003075,1.35e-08,64;UBERON:0007284,1.35e-08,64;UBERON:0000073,1.98e-08,54;UBERON:0001049,4.80e-08,52;UBERON:0005068,4.80e-08,52;UBERON:0006241,4.80e-08,52;UBERON:0007135,4.80e-08,52;UBERON:0002048,7.47e-08,14;UBERON:0000117,7.47e-08,14;UBERON:0000171,7.47e-08,14;UBERON:0000170,7.47e-08,14;UBERON:0005597,7.47e-08,14;UBERON:0000118,7.47e-08,14;UBERON:0002021,8.07e-08,10;UBERON:0000411,8.07e-08,10;UBERON:0001950,8.07e-08,10;UBERON:0002020,6.28e-07,34 | |||
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,2.6648780945253,3.23960427823721,3.49780939064073,1.26184866143295,2.05671650408608,1.69755860719212,2.63634199468316,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,2.51793635951155,4.1564541800001,2.38610777810186,0,0,0,0,0.55994568650145,0,0.167782606057736,0.725362142011344,0.336093799142464,0.514518872071894,0.573066879877513,0,2.83243045203437,2.64495489636016,1.90149421051854,0,0,0,0,0,0.898800331555214,1.15265491596466,1.45165457231869,0.405017814995072,0.420649922702764,3.99911378165325,5.96345060569357,0.61245399607477,0.383381884072945,0,1.10115880999389,4.34136949489638,4.6081959976873,3.16527090552465,1.73826522844578,2.6045668527838,4.18774498502071,6.75315132038016,2.75036845998258,4.71405736757868,10.5355043791336,9.13357284543973,10.7531194533121,6.72586884950391,0,0,0,0,0,0.448026887097336,2.24711072210803,0,0,0,8.59144860637751,0,0,0,0,0,0,0.91347103775248,8.02707439306232,1.33597925158342,2.25530924795977,0.913396434936424,2.30615497256059,3.16517545160507,3.29248379979973,2.01066546127481,1.73036477414062,0.722996784599558,2.65383165584962,1.7794353494215,2.87093973998512,2.42437626567611,0,1.46390398505774,2.30391377494801,0.510914110417183,0,0,0,7.33974133083631,0,1.7591609295801,9.56033761057521,11.2514801225345,4.36354893575076,3.24482526135515,1.52759045775474,1.99051152976149,0,1.26265113531884,1.30120442962704,2.75882525320168,2.88099407688559,3.0140963567143,2.9255694635071,1.92170580427275,1.96773621575431,0.258703370739016,0.431135985865684,0.945530400839096,1.58356011747554,1.09597866213787,2.78047249225598,1.74126083261083,2.05782136407943,2.38841120182192,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.787056926989615,1.54267112887378,1.39520366850245,1.87791380979733,0.817357396570186,2.30383789878873,1.97000956894914,1.05389452409612,1.31579988682799,0.439100230582101,0.134206418760372,3.57492912559016,3.70456604565424,0.330418782983798,0.528901133327089,0.639864751605702,0.464473343720877,0.38660238396628,0.80673409849337,1.33426826306922,0.570676878337677,0.474529061544512,0.823494773620054,1.50801125280162,1.39269530428806,2.33956904542944,0.898819408654221,1.29682829924817,0.995706366271836,1.32767530667157,1.48523066392647,0,0.203651327845314,0.581857461502877,0.771494018793504,1.3279672796094,0.147610147979602,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,1.82574109249653,1.92941727801933,1.01850340712568,1.15078454980324,2.2698931748505,3.0201755450689,7.18841032636773,6.69853705803306,2.18426371180192,1.01031551178845,0.358794827043824,1.4473305640901,3.32555742299888,0.37898282354097,3.09633455239849,3.73439188705414,6.80601720036656,8.04030035720716,10.9500074807566,15.8058254764817,8.35466263762812,12.8449519996289,15.7860220970912,5.57135270033509,8.97961905702657,4.48412081602686,0,0,2.45882136509518,0.551873492609465,3.05046120976805,3.39913891117389,0.983609672260053,1.51482556322624,1.26203287766503,1.56175497718655,2.80050417052639,3.10659437338318,3.34198011123591,7.92614286208731,1.61924280669958,0.292255857911312,2.37172666767914,6.74774764485795,0.851640511249612,1.95872164033981,0.977321756121456,1.81467135269789,0,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,2.15204603560749,0.775284879504663,1.09060118843252,1.42598951353889,2.21225730555071,0,1.03135543248187,0.340439605753788,0.36012218806262,1.16422815404479,2.35770738534752,2.48276327099183,2.31879462882692,3.1264313914403,3.34911444026059,0,0.21183207086382,0.661585194164886,3.95727007059552,3.71368181400583,4.76472106932431,2.50681922406587,2.9545361954111,1.7488850197791,3.15223013417866,5.80960994712699,0.412773735926445,1.85194527369712,2.63715839806567,3.14396723758358,6.63456702298916,0.169978429993855,0.419854356970974,1.79659965945751,0.954670618015114,0.316335993581135,1.62655573701479,2.26811215725783,1.46361807210128,0.655087691238533,1.34864346384821,2.89287095038676,2.09404753587224,1.29614973291793,1.86401793926078,0,2.69129782879162,0.992750942742586,1.16670713006429,2.32487682259916,2.70329800785245,0.938857909166032,1.0416350787516,0.104859344425711,0,0,0.632022241256357,0.405450430580328,0.718976700153791,0.25984164595559,0.716106782669926,0,1.20195449519969,0.295379054349154,0.605798699688886,0.609654453239999,0.806609481094724,0.0974578807397524,1.05833025804362,0.467507608726276,0.680191150845634,0,0,0,0.772758376128762,0.375364950902364,0.73260649706906,0.857473516316263,0.501572104035363,4.51801474093653,5.06357760157895,5.15605962095457,5.499301834998,10.9613203163303,9.06472676867641,9.45031500324528,9.00642406448441,13.5942722695261,11.9084871702919,0.415149390336707,0,0.853668028770671,2.67417388775123,0.838452650511929,2.20612210140017,3.11145418922261,2.88449080134452,3.20919209591815,2.52697211763797,1.77435509923168,2.64076877940507,3.09016974650612,3.7134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| |phase1_expression=4.80446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,2.6648780945253,3.23960427823721,3.49780939064073,1.26184866143295,2.05671650408608,1.69755860719212,2.63634199468316,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,2.51793635951155,4.1564541800001,2.38610777810186,0,0,0,0,0.55994568650145,0,0.167782606057736,0.725362142011344,0.336093799142464,0.514518872071894,0.573066879877513,0,2.83243045203437,2.64495489636016,1.90149421051854,0,0,0,0,0,0.898800331555214,1.15265491596466,1.45165457231869,0.405017814995072,0.420649922702764,3.99911378165325,5.96345060569357,0.61245399607477,0.383381884072945,0,1.10115880999389,4.34136949489638,4.6081959976873,3.16527090552465,1.73826522844578,2.6045668527838,4.18774498502071,6.75315132038016,2.75036845998258,4.71405736757868,10.5355043791336,9.13357284543973,10.7531194533121,6.72586884950391,0,0,0,0,0,0.448026887097336,2.24711072210803,0,0,0,8.59144860637751,0,0,0,0,0,0,0.91347103775248,8.02707439306232,1.33597925158342,2.25530924795977,0.913396434936424,2.30615497256059,3.16517545160507,3.29248379979973,2.01066546127481,1.73036477414062,0.722996784599558,2.65383165584962,1.7794353494215,2.87093973998512,2.42437626567611,0,1.46390398505774,2.30391377494801,0.510914110417183,0,0,0,7.33974133083631,0,1.7591609295801,9.56033761057521,11.2514801225345,4.36354893575076,3.24482526135515,1.52759045775474,1.99051152976149,0,1.26265113531884,1.30120442962704,2.75882525320168,2.88099407688559,3.0140963567143,2.9255694635071,1.92170580427275,1.96773621575431,0.258703370739016,0.431135985865684,0.945530400839096,1.58356011747554,1.09597866213787,2.78047249225598,1.74126083261083,2.05782136407943,2.38841120182192,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.787056926989615,1.54267112887378,1.39520366850245,1.87791380979733,0.817357396570186,2.30383789878873,1.97000956894914,1.05389452409612,1.31579988682799,0.439100230582101,0.134206418760372,3.57492912559016,3.70456604565424,0.330418782983798,0.528901133327089,0.639864751605702,0.464473343720877,0.38660238396628,0.80673409849337,1.33426826306922,0.570676878337677,0.474529061544512,0.823494773620054,1.50801125280162,1.39269530428806,2.33956904542944,0.898819408654221,1.29682829924817,0.995706366271836,1.32767530667157,1.48523066392647,0,0.203651327845314,0.581857461502877,0.771494018793504,1.3279672796094,0.147610147979602,0.156998727841375,0,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,1.82574109249653,1.92941727801933,1.01850340712568,1.15078454980324,2.2698931748505,3.0201755450689,7.18841032636773,6.69853705803306,2.18426371180192,1.01031551178845,0.358794827043824,1.4473305640901,3.32555742299888,0.37898282354097,3.09633455239849,3.73439188705414,6.80601720036656,8.04030035720716,10.9500074807566,15.8058254764817,8.35466263762812,12.8449519996289,15.7860220970912,5.57135270033509,8.97961905702657,4.48412081602686,0,0,2.45882136509518,0.551873492609465,3.05046120976805,3.39913891117389,0.983609672260053,1.51482556322624,1.26203287766503,1.56175497718655,2.80050417052639,3.10659437338318,3.34198011123591,7.92614286208731,1.61924280669958,0.292255857911312,2.37172666767914,6.74774764485795,0.851640511249612,1.95872164033981,0.977321756121456,1.81467135269789,0,0.485561272309963,0.604647113929502,0.565815239267694,1.47650946440386,2.15204603560749,0.775284879504663,1.09060118843252,1.42598951353889,2.21225730555071,0,1.03135543248187,0.340439605753788,0.36012218806262,1.16422815404479,2.35770738534752,2.48276327099183,2.31879462882692,3.1264313914403,3.34911444026059,0,0.21183207086382,0.661585194164886,3.95727007059552,3.71368181400583,4.76472106932431,2.50681922406587,2.9545361954111,1.7488850197791,3.15223013417866,5.80960994712699,0.412773735926445,1.85194527369712,2.63715839806567,3.14396723758358,6.63456702298916,0.169978429993855,0.419854356970974,1.79659965945751,0.954670618015114,0.316335993581135,1.62655573701479,2.26811215725783,1.46361807210128,0.655087691238533,1.34864346384821,2.89287095038676,2.09404753587224,1.29614973291793,1.86401793926078,0,2.69129782879162,0.992750942742586,1.16670713006429,2.32487682259916,2.70329800785245,0.938857909166032,1.0416350787516,0.104859344425711,0,0,0.632022241256357,0.405450430580328,0.718976700153791,0.25984164595559,0.716106782669926,0,1.20195449519969,0.295379054349154,0.605798699688886,0.609654453239999,0.806609481094724,0.0974578807397524,1.05833025804362,0.467507608726276,0.680191150845634,0,0,0,0.772758376128762,0.375364950902364,0.73260649706906,0.857473516316263,0.501572104035363,4.51801474093653,5.06357760157895,5.15605962095457,5.499301834998,10.9613203163303,9.06472676867641,9.45031500324528,9.00642406448441,13.5942722695261,11.9084871702919,0.415149390336707,0,0.853668028770671,2.67417388775123,0.838452650511929,2.20612210140017,3.11145418922261,2.88449080134452,3.20919209591815,2.52697211763797,1.77435509923168,2.64076877940507,3.09016974650612,3.7134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| ||
|short_description=p1@Gfra2 | |short_description=p1@Gfra2 | ||
}} | }} |
Latest revision as of 08:55, 26 September 2015
Short description: | p1@Gfra2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gfra2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000022699, NM_008115, uc007uoz.1, uc007upa.1, uc007upb.1_5end |
EntrezGene: | Gfra2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.25e-13 | 95 |
ectoderm | 9.25e-13 | 95 |
presumptive ectoderm | 9.25e-13 | 95 |
ecto-epithelium | 6.90e-11 | 73 |
nervous system | 1.50e-10 | 75 |
central nervous system | 1.47e-09 | 73 |
neurectoderm | 1.35e-08 | 64 |
neural plate | 1.35e-08 | 64 |
presumptive neural plate | 1.35e-08 | 64 |
regional part of nervous system | 1.98e-08 | 54 |
neural tube | 4.80e-08 | 52 |
neural rod | 4.80e-08 | 52 |
future spinal cord | 4.80e-08 | 52 |
neural keel | 4.80e-08 | 52 |
lung | 7.47e-08 | 14 |
respiratory tube | 7.47e-08 | 14 |
respiration organ | 7.47e-08 | 14 |
pair of lungs | 7.47e-08 | 14 |
lung primordium | 7.47e-08 | 14 |
lung bud | 7.47e-08 | 14 |
occipital lobe | 8.07e-08 | 10 |
visual cortex | 8.07e-08 | 10 |
neocortex | 8.07e-08 | 10 |
gray matter | 6.28e-07 | 34 |