FFCP PHASE1:Mm9::chr17:25570720..25570735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58226 | |EntrezGene=58226 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JJ85,E9Q6P9,E0CYZ3,Q3UX23,O88427 | |UniProt=Q9JJ85,E9Q6P9,E0CYZ3,Q3UX23,O88427 | ||
|association_with_transcript=0bp_to_ENSMUST00000068905,ENSMUST00000078496,ENSMUST00000159048,ENSMUST00000159052,ENSMUST00000159610,NM_001163691,NM_021415,uc008bav.2,uc012ang.1_5end | |association_with_transcript=0bp_to_ENSMUST00000068905,ENSMUST00000078496,ENSMUST00000159048,ENSMUST00000159052,ENSMUST00000159610,NM_001163691,NM_021415,uc008bav.2,uc012ang.1_5end | ||
|cluster_id=chr17:25570720..25570735,- | |||
|description=CAGE_peak_1_at_Cacna1h_5end | |description=CAGE_peak_1_at_Cacna1h_5end | ||
|id=chr17:25570720..25570735,- | |id=chr17:25570720..25570735,- | ||
|ontology_enrichment_celltype=CL:0000540!6.74e-08!33;CL:0000047!6.74e-08!33;CL:0000031!6.74e-08!33;CL:0000404!6.74e-08!33;CL:0000117!8.03e-08!23;CL:0000337!8.03e-08!23 | |ontology_enrichment_celltype=CL:0000540!6.74e-08!33;CL:0000047!6.74e-08!33;CL:0000031!6.74e-08!33;CL:0000404!6.74e-08!33;CL:0000117!8.03e-08!23;CL:0000337!8.03e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.11e-08,33;CL:0000047,5.11e-08,33;CL:0000031,5.11e-08,33;CL:0000404,5.11e-08,33;CL:0000117,6.12e-08,23;CL:0000337,6.12e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.25e-15!71;UBERON:0003075!6.25e-15!71;UBERON:0007284!6.25e-15!71;UBERON:0004121!1.16e-13!102;UBERON:0000924!1.16e-13!102;UBERON:0006601!1.16e-13!102;UBERON:0000468!2.17e-12!333;UBERON:0003056!1.99e-11!49;UBERON:0001017!5.28e-11!73;UBERON:0005743!5.28e-11!73;UBERON:0000073!5.74e-11!75;UBERON:0001016!5.74e-11!75;UBERON:0000033!3.28e-10!63;UBERON:0000922!5.67e-10!328;UBERON:0001049!7.10e-09!52;UBERON:0005068!7.10e-09!52;UBERON:0006241!7.10e-09!52;UBERON:0007135!7.10e-09!52;UBERON:0003080!2.96e-08!40;UBERON:0002780!5.87e-08!39;UBERON:0001890!5.87e-08!39;UBERON:0006240!5.87e-08!39;UBERON:0000955!5.99e-08!50;UBERON:0006238!5.99e-08!50;UBERON:0002616!1.88e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.76e-17,92;UBERON:0003056,1.30e-11,49;UBERON:0002346,1.77e-11,64;UBERON:0003075,1.77e-11,64;UBERON:0007284,1.77e-11,64;UBERON:0001017,3.51e-11,73;UBERON:0001016,3.82e-11,75;UBERON:0004121,4.35e-10,95;UBERON:0000924,4.35e-10,95;UBERON:0006601,4.35e-10,95;UBERON:0000073,2.42e-09,54;UBERON:0000922,3.22e-09,320;UBERON:0001049,5.17e-09,52;UBERON:0005068,5.17e-09,52;UBERON:0006241,5.17e-09,52;UBERON:0007135,5.17e-09,52;UBERON:0010371,1.08e-08,73;UBERON:0003080,2.21e-08,40;UBERON:0002780,4.45e-08,39;UBERON:0001890,4.45e-08,39;UBERON:0006240,4.45e-08,39;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,3.52e-07,46 | |||
|phase1_expression=8.96833543786846,0.348975407639361,0,0,0,2.68606835059024,4.43864017131499,0,0,0,0,0,0,0,1.33243904726265,1.82227740650843,1.39912375625629,4.57420139769445,4.79900517620086,2.97072756258621,5.44277056966847,0,0,1.11994695955385,1.60586496747019,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,3.48840250208714,1.75748946187577,1.55543919259427,3.3596741190087,1.43752564364972,2.01339127269284,0,0,0.257259436035947,0.286533439938757,0.515672092277442,17.1968991730658,25.9205579843296,17.1134478946668,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,5.69240209984969,8.4528027170742,12.0279950277834,9.99043943654511,10.9368979902719,13.7112472513826,16.7860091123226,13.5964787128599,14.0892842396807,23.8996884518605,9.91042928994498,8.93811366596314,12.4421291937557,21.3655786122914,19.3953804437108,14.0646610050325,8.65467296904281,11.2552522006336,14.9742282821274,21.5078867395777,16.9422300150933,20.5039390407831,8.48133365331661,6.87701196971748,1.15945795480671,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,8.87313544593087,0,0,0,0,0.253359865475099,0,0.79928715803342,3.88406825470758,69.6193632214028,18.7364152907427,24.3572382649713,24.4452427091422,21.7040602395776,26.1046929841265,46.4966387919799,0.247194967734374,1.15679485535929,1.76922110389975,4.20593809863264,1.54589062922275,0.484875253135222,11.1835056730873,1.46390398505774,1.46612694769419,8.68553987709211,0,0,0,14.9790639404823,33.8550446085784,32.6701315493447,8.69121600961382,13.0414883238469,11.0127663616567,18.6577452527921,18.4329248569072,2.48813941220186,5.30717792710717,10.1012090825508,10.4096354370163,13.5642241615749,10.4436035287103,15.2211866014072,38.8488410154082,32.412771232067,46.0075467588269,21.9897865128163,13.3652155618362,32.3371397086971,27.2724242454121,22.1387689751851,15.8486932058591,11.4923214952315,5.76189981942242,28.4619001550445,0,0,0,41.0109029620294,32.1300702174102,20.5270750065557,28.17262353464,23.2181793461937,15.4267112887378,12.7893669612724,15.8281306825775,13.1944836874902,13.3293478429919,6.40253109908471,8.75543143095242,9.9415991449226,5.92785311285837,11.0049263383505,31.7537822331832,21.1983501501326,0,2.3800550999719,20.4756720513825,22.759193842323,15.0774929746849,10.6892268050372,10.6741461045538,8.94060442729028,4.2707615539006,7.08205505313247,7.03738584640755,9.35095418593409,8.57841983324129,5.39291645192533,4.97117514711797,5.17767310461355,9.10405924574792,9.59687505921722,10.1436962105772,8.5533557695032,9.11576689687841,10.6606446233284,4.11037491307672,0.295220295959204,0.31399745568275,0.740382983530803,0.296452627087149,3.33690211432188,4.91397487783007,2.24862112384854,1.21716072833102,1.68824011826692,1.78238096246994,0.287696137450811,1.29708181420028,1.37280706594041,0,0.744281895337007,0,0,0,0,1.10851914099963,11.3694847062291,8.96307370431142,6.11082308790677,4.22442446919304,5.02518772325447,3.33261097240419,2.14647012643579,2.20689201748667,1.10732344824387,0.797273843287435,0.81931657357869,1.20879487306127,0.433947175744535,0,0,0,0.275936746304732,7.86697890940181,10.0802050469295,0,2.7771801992481,2.83957397474631,3.12350995437311,4.52389135238878,11.2315335037699,15.1503098376028,16.1353622549635,6.47697122679831,10.2289550268959,13.8350722281283,39.8438432363041,19.1619115031163,20.1214132143998,19.0577742443684,16.9919226661712,0,14.3240575331439,10.883648050731,6.97838795096823,9.7449624650655,9.53048958626175,6.46070732920553,5.81653967164009,4.9909632973861,4.10847785316561,1.05418608574999,0,14.9793426531667,9.54323798365944,15.781759421496,15.2179294872431,16.4926417287314,19.4422011186257,19.087686389846,25.5750557256263,0.469343416127421,0.21183207086382,1.98475558249466,0.8244312647074,1.77610869365496,1.62844897306021,1.43246812803764,1.14898629821543,3.78925087618806,9.27126510052548,5.29699730473343,16.717336305021,3.88908507476395,0.753473828018764,1.6403307326523,2.0590035588587,0,0,0.138199973804424,3.81868247206045,17.8729836373341,13.2157653632452,11.6645768087545,9.19988502463662,8.07941485860857,9.97996163247673,14.1337409290324,7.0674104335688,9.72112299688447,0.621339313086926,10.7101658349996,30.2023423008837,24.1569396067363,32.6677996418,22.7321289320807,23.4849014432182,28.8698807068555,19.9212708811244,14.9948862528767,7.9722759872582,6.91272015018877,1.89606672376907,6.48720688928525,2.97861775777999,0.649604114888975,0.537080087002444,0.596044064343795,0.600977247599844,0.147689527174577,0,0.381034033274999,0.504130925684203,0.194915761479505,0.673482891482306,0.116876902181569,0.906921534460845,1.99787358036658,0.807424709485281,0.335769232728157,34.7741269257943,13.1377732815827,8.24182309202693,4.50173596066038,4.51414893631827,10.7302850097243,5.06357760157895,6.30185064783336,10.6548973053086,6.16574267793578,7.55393897389701,6.07520250208625,6.30449684513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| |phase1_expression=8.96833543786846,0.348975407639361,0,0,0,2.68606835059024,4.43864017131499,0,0,0,0,0,0,0,1.33243904726265,1.82227740650843,1.39912375625629,4.57420139769445,4.79900517620086,2.97072756258621,5.44277056966847,0,0,1.11994695955385,1.60586496747019,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,3.48840250208714,1.75748946187577,1.55543919259427,3.3596741190087,1.43752564364972,2.01339127269284,0,0,0.257259436035947,0.286533439938757,0.515672092277442,17.1968991730658,25.9205579843296,17.1134478946668,0.677689064138264,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,5.69240209984969,8.4528027170742,12.0279950277834,9.99043943654511,10.9368979902719,13.7112472513826,16.7860091123226,13.5964787128599,14.0892842396807,23.8996884518605,9.91042928994498,8.93811366596314,12.4421291937557,21.3655786122914,19.3953804437108,14.0646610050325,8.65467296904281,11.2552522006336,14.9742282821274,21.5078867395777,16.9422300150933,20.5039390407831,8.48133365331661,6.87701196971748,1.15945795480671,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,8.87313544593087,0,0,0,0,0.253359865475099,0,0.79928715803342,3.88406825470758,69.6193632214028,18.7364152907427,24.3572382649713,24.4452427091422,21.7040602395776,26.1046929841265,46.4966387919799,0.247194967734374,1.15679485535929,1.76922110389975,4.20593809863264,1.54589062922275,0.484875253135222,11.1835056730873,1.46390398505774,1.46612694769419,8.68553987709211,0,0,0,14.9790639404823,33.8550446085784,32.6701315493447,8.69121600961382,13.0414883238469,11.0127663616567,18.6577452527921,18.4329248569072,2.48813941220186,5.30717792710717,10.1012090825508,10.4096354370163,13.5642241615749,10.4436035287103,15.2211866014072,38.8488410154082,32.412771232067,46.0075467588269,21.9897865128163,13.3652155618362,32.3371397086971,27.2724242454121,22.1387689751851,15.8486932058591,11.4923214952315,5.76189981942242,28.4619001550445,0,0,0,41.0109029620294,32.1300702174102,20.5270750065557,28.17262353464,23.2181793461937,15.4267112887378,12.7893669612724,15.8281306825775,13.1944836874902,13.3293478429919,6.40253109908471,8.75543143095242,9.9415991449226,5.92785311285837,11.0049263383505,31.7537822331832,21.1983501501326,0,2.3800550999719,20.4756720513825,22.759193842323,15.0774929746849,10.6892268050372,10.6741461045538,8.94060442729028,4.2707615539006,7.08205505313247,7.03738584640755,9.35095418593409,8.57841983324129,5.39291645192533,4.97117514711797,5.17767310461355,9.10405924574792,9.59687505921722,10.1436962105772,8.5533557695032,9.11576689687841,10.6606446233284,4.11037491307672,0.295220295959204,0.31399745568275,0.740382983530803,0.296452627087149,3.33690211432188,4.91397487783007,2.24862112384854,1.21716072833102,1.68824011826692,1.78238096246994,0.287696137450811,1.29708181420028,1.37280706594041,0,0.744281895337007,0,0,0,0,1.10851914099963,11.3694847062291,8.96307370431142,6.11082308790677,4.22442446919304,5.02518772325447,3.33261097240419,2.14647012643579,2.20689201748667,1.10732344824387,0.797273843287435,0.81931657357869,1.20879487306127,0.433947175744535,0,0,0,0.275936746304732,7.86697890940181,10.0802050469295,0,2.7771801992481,2.83957397474631,3.12350995437311,4.52389135238878,11.2315335037699,15.1503098376028,16.1353622549635,6.47697122679831,10.2289550268959,13.8350722281283,39.8438432363041,19.1619115031163,20.1214132143998,19.0577742443684,16.9919226661712,0,14.3240575331439,10.883648050731,6.97838795096823,9.7449624650655,9.53048958626175,6.46070732920553,5.81653967164009,4.9909632973861,4.10847785316561,1.05418608574999,0,14.9793426531667,9.54323798365944,15.781759421496,15.2179294872431,16.4926417287314,19.4422011186257,19.087686389846,25.5750557256263,0.469343416127421,0.21183207086382,1.98475558249466,0.8244312647074,1.77610869365496,1.62844897306021,1.43246812803764,1.14898629821543,3.78925087618806,9.27126510052548,5.29699730473343,16.717336305021,3.88908507476395,0.753473828018764,1.6403307326523,2.0590035588587,0,0,0.138199973804424,3.81868247206045,17.8729836373341,13.2157653632452,11.6645768087545,9.19988502463662,8.07941485860857,9.97996163247673,14.1337409290324,7.0674104335688,9.72112299688447,0.621339313086926,10.7101658349996,30.2023423008837,24.1569396067363,32.6677996418,22.7321289320807,23.4849014432182,28.8698807068555,19.9212708811244,14.9948862528767,7.9722759872582,6.91272015018877,1.89606672376907,6.48720688928525,2.97861775777999,0.649604114888975,0.537080087002444,0.596044064343795,0.600977247599844,0.147689527174577,0,0.381034033274999,0.504130925684203,0.194915761479505,0.673482891482306,0.116876902181569,0.906921534460845,1.99787358036658,0.807424709485281,0.335769232728157,34.7741269257943,13.1377732815827,8.24182309202693,4.50173596066038,4.51414893631827,10.7302850097243,5.06357760157895,6.30185064783336,10.6548973053086,6.16574267793578,7.55393897389701,6.07520250208625,6.30449684513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| ||
|short_description=p1@Cacna1h | |short_description=p1@Cacna1h | ||
}} | }} |
Latest revision as of 02:21, 26 September 2015
Short description: | p1@Cacna1h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna1h_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000068905, ENSMUST00000078496, ENSMUST00000159048, ENSMUST00000159052, ENSMUST00000159610, NM_001163691, NM_021415, uc008bav.2, uc012ang.1_5end |
EntrezGene: | Cacna1h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.11e-08 | 33 |
neuronal stem cell | 5.11e-08 | 33 |
neuroblast | 5.11e-08 | 33 |
electrically signaling cell | 5.11e-08 | 33 |
CNS neuron (sensu Vertebrata) | 6.12e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.76e-17 | 92 |
pre-chordal neural plate | 1.30e-11 | 49 |
neurectoderm | 1.77e-11 | 64 |
neural plate | 1.77e-11 | 64 |
presumptive neural plate | 1.77e-11 | 64 |
central nervous system | 3.51e-11 | 73 |
nervous system | 3.82e-11 | 75 |
ectoderm-derived structure | 4.35e-10 | 95 |
ectoderm | 4.35e-10 | 95 |
presumptive ectoderm | 4.35e-10 | 95 |
regional part of nervous system | 2.42e-09 | 54 |
embryo | 3.22e-09 | 320 |
neural tube | 5.17e-09 | 52 |
neural rod | 5.17e-09 | 52 |
future spinal cord | 5.17e-09 | 52 |
neural keel | 5.17e-09 | 52 |
ecto-epithelium | 1.08e-08 | 73 |
anterior neural tube | 2.21e-08 | 40 |
regional part of forebrain | 4.45e-08 | 39 |
forebrain | 4.45e-08 | 39 |
future forebrain | 4.45e-08 | 39 |
brain | 1.11e-07 | 47 |
future brain | 1.11e-07 | 47 |
regional part of brain | 3.52e-07 | 46 |