FFCP PHASE1:Hg19::chr12:52881014..52881084,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52881014..52881084,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_at_chr12:52881014..52881084,- | |description=CAGE_peak_at_chr12:52881014..52881084,- | ||
|id=chr12:52881014..52881084,- | |id=chr12:52881014..52881084,- | ||
|ontology_enrichment_celltype=CL:0002076!4.32e-25!43;CL:0000066!1.50e-18!254;CL:0002368!3.99e-18!13;CL:0000223!4.78e-18!59;CL:0002251!4.32e-12!21;CL:0002159!4.21e-11!13;CL:0000244!3.33e-10!4;CL:0000731!3.33e-10!4;CL:0002202!6.15e-10!9;CL:0002632!6.15e-10!9;CL:0002621!6.90e-09!3;CL:0002328!1.04e-08!3;CL:0000068!2.55e-08!3;CL:0000069!2.55e-08!3;CL:0000307!2.55e-08!3;CL:0000377!2.55e-08!3;CL:0002623!2.89e-08!3;CL:0000622!3.89e-08!5;CL:0000349!3.97e-08!3;CL:0002577!3.97e-08!3;CL:0002541!6.28e-08!3;CL:0000240!3.83e-07!6;CL:0000311!3.83e-07!6;CL:0000079!3.83e-07!6;CL:0000237!3.83e-07!6;CL:0000036!3.83e-07!6;CL:0000357!3.83e-07!6;CL:0000114!3.83e-07!6;CL:0000076!6.47e-07!62;CL:0000154!9.07e-07!6 | |ontology_enrichment_celltype=CL:0002076!4.32e-25!43;CL:0000066!1.50e-18!254;CL:0002368!3.99e-18!13;CL:0000223!4.78e-18!59;CL:0002251!4.32e-12!21;CL:0002159!4.21e-11!13;CL:0000244!3.33e-10!4;CL:0000731!3.33e-10!4;CL:0002202!6.15e-10!9;CL:0002632!6.15e-10!9;CL:0002621!6.90e-09!3;CL:0002328!1.04e-08!3;CL:0000068!2.55e-08!3;CL:0000069!2.55e-08!3;CL:0000307!2.55e-08!3;CL:0000377!2.55e-08!3;CL:0002623!2.89e-08!3;CL:0000622!3.89e-08!5;CL:0000349!3.97e-08!3;CL:0002577!3.97e-08!3;CL:0002541!6.28e-08!3;CL:0000240!3.83e-07!6;CL:0000311!3.83e-07!6;CL:0000079!3.83e-07!6;CL:0000237!3.83e-07!6;CL:0000036!3.83e-07!6;CL:0000357!3.83e-07!6;CL:0000114!3.83e-07!6;CL:0000076!6.47e-07!62;CL:0000154!9.07e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.77e-27;13!CL:0002076;9.24e-25;42!CL:0002202;7.07e-15;9!CL:0002632;7.07e-15;9!CL:0002621;1.12e-12;3!CL:0002328;1.79e-12;3!CL:0000307;6.53e-12;3!CL:0002623;8.48e-12;3!CL:0000349;9.47e-12;19!CL:0002577;1.35e-11;3!CL:0002251;4.40e-11;20!CL:0000240;2.18e-10;6!CL:0000311;2.18e-10;6!CL:0000079;2.18e-10;6!CL:0000237;2.18e-10;6!CL:0002159;2.99e-09;14!CL:0000244;5.84e-09;4!CL:0000731;5.84e-09;4!CL:0000575;7.54e-09;2!CL:0002327;8.13e-09;4!CL:0000312;1.69e-07;5!CL:0000622;3.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.98e-31,42;CL:0002368,2.13e-27,13;CL:0000223,2.33e-21,58;CL:0000066,9.98e-16,253;CL:0002202,8.00e-15,9;CL:0002632,8.00e-15,9;CL:0002621,1.02e-12,3;CL:0002328,1.90e-12,3;CL:0000068,7.45e-12,3;CL:0000069,7.45e-12,3;CL:0000307,7.45e-12,3;CL:0000377,7.45e-12,3;CL:0002623,8.98e-12,3;CL:0000349,1.02e-11,19;CL:0002577,1.46e-11,3;CL:0002251,4.11e-11,20;CL:0000240,2.07e-10,6;CL:0000311,2.07e-10,6;CL:0000079,2.07e-10,6;CL:0000237,2.07e-10,6;CL:0000036,2.07e-10,6;CL:0000357,2.07e-10,6;CL:0000114,2.07e-10,6;CL:0002159,3.38e-09,14;CL:0000244,5.30e-09,4;CL:0000731,5.30e-09,4;CL:0002327,7.19e-09,4;CL:0000575,9.70e-09,2;CL:0000312,1.75e-07,5;CL:0000622,3.10e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;3.91e-12;58!CL:0000377;6.53e-12;3!CL:0000357;2.18e-10;6!CL:0000114;2.18e-10;6 | |||
|ontology_enrichment_disease=DOID:1749!1.90e-14!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.20e-19!14;UBERON:0000158!3.20e-19!14;UBERON:0003124!5.03e-16!7;UBERON:0004119!6.05e-15!169;UBERON:0000925!6.05e-15!169;UBERON:0006595!6.05e-15!169;UBERON:0001004!1.00e-14!72;UBERON:0000166!2.74e-14!21;UBERON:0000161!9.18e-14!35;UBERON:0000365!6.37e-12!5;UBERON:0000165!6.60e-12!28;UBERON:0000930!6.60e-12!28;UBERON:0007196!2.46e-10!14;UBERON:0001558!2.46e-10!14;UBERON:0000478!3.89e-10!24;UBERON:0005910!7.18e-10!6;UBERON:0001987!8.83e-10!4;UBERON:0004340!8.83e-10!4;UBERON:0001444!4.07e-09!48;UBERON:0001949!6.90e-09!3;UBERON:0004923!6.98e-09!57;UBERON:0004815!1.04e-08!3;UBERON:0002031!1.04e-08!3;UBERON:0003126!1.20e-08!7;UBERON:0001005!1.20e-08!7;UBERON:0003102!1.65e-08!95;UBERON:0000344!3.35e-08!12;UBERON:0000065!4.44e-08!53;UBERON:0000476!6.28e-08!3;UBERON:0000920!6.28e-08!3;UBERON:0003729!1.80e-07!5;UBERON:0005795!3.16e-07!22;UBERON:0000077!3.69e-07!130;UBERON:0003100!8.36e-07!41;UBERON:0001007!9.06e-07!155;UBERON:0001555!9.06e-07!155;UBERON:0007026!9.06e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.12e-12;3!UBERON:0004815;1.79e-12;3!UBERON:0002031;1.79e-12;3!UBERON:0007196;1.73e-11;15!UBERON:0001558;1.73e-11;15!UBERON:0000486;4.97e-11;12!UBERON:0005631;8.36e-10;10!UBERON:0000158;8.36e-10;10!UBERON:0000165;1.84e-09;28!UBERON:0000478;5.07e-09;24!UBERON:0001911;8.13e-09;4!UBERON:0001987;8.24e-09;4!UBERON:0003126;1.26e-08;7!UBERON:0001005;1.26e-08;7!UBERON:0002185;1.21e-07;5!UBERON:0000365;3.00e-07;5!UBERON:0005178;3.48e-07;34!UBERON:0002224;3.48e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.17e-16,14;UBERON:0000158,2.17e-16,14;UBERON:0001004,8.63e-14,74;UBERON:0004119,9.90e-14,160;UBERON:0000925,9.90e-14,160;UBERON:0006595,9.90e-14,160;UBERON:0003124,3.39e-13,7;UBERON:0001949,1.02e-12,3;UBERON:0004815,1.90e-12,3;UBERON:0002031,1.90e-12,3;UBERON:0007196,2.08e-11,15;UBERON:0001558,2.08e-11,15;UBERON:0000166,6.84e-10,22;UBERON:0000165,4.55e-09,29;UBERON:0000930,4.55e-09,29;UBERON:0000478,5.38e-09,24;UBERON:0000065,6.71e-09,54;UBERON:0001911,7.19e-09,4;UBERON:0005333,7.19e-09,4;UBERON:0008425,7.19e-09,4;UBERON:0005311,7.19e-09,4;UBERON:0001987,8.71e-09,4;UBERON:0004340,8.71e-09,4;UBERON:0000161,1.10e-08,36;UBERON:0003126,1.53e-08,7;UBERON:0001005,1.53e-08,7;UBERON:0003102,4.22e-08,99;UBERON:0002185,1.25e-07,5;UBERON:0005178,1.81e-07,34;UBERON:0002224,1.81e-07,34;UBERON:0000365,2.78e-07,5;UBERON:0005181,3.29e-07,35;UBERON:0000033,3.29e-07,56;UBERON:0001444,3.38e-07,49 | |||
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| ||
|short_description=p@chr12:52881014..52881084,- | |short_description=p@chr12:52881014..52881084,- | ||
}} | }} |
Latest revision as of 09:32, 24 July 2015
Short description: | p@chr12:52881014..52881084, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52881014..52881084, - |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.17e-16 | 14 |
membranous layer | 2.17e-16 | 14 |
respiratory system | 8.63e-14 | 74 |
endoderm-derived structure | 9.90e-14 | 160 |
endoderm | 9.90e-14 | 160 |
presumptive endoderm | 9.90e-14 | 160 |
chorion | 3.39e-13 | 7 |
gingival epithelium | 1.02e-12 | 3 |
lower respiratory tract epithelium | 1.90e-12 | 3 |
epithelium of bronchus | 1.90e-12 | 3 |
tracheobronchial tree | 2.08e-11 | 15 |
lower respiratory tract | 2.08e-11 | 15 |
oral opening | 6.84e-10 | 22 |
mouth | 4.55e-09 | 29 |
stomodeum | 4.55e-09 | 29 |
extraembryonic structure | 5.38e-09 | 24 |
respiratory tract | 6.71e-09 | 54 |
mammary gland | 7.19e-09 | 4 |
mammary bud | 7.19e-09 | 4 |
mammary ridge | 7.19e-09 | 4 |
mammary placode | 7.19e-09 | 4 |
placenta | 8.71e-09 | 4 |
allantois | 8.71e-09 | 4 |
orifice | 1.10e-08 | 36 |
trachea | 1.53e-08 | 7 |
respiratory airway | 1.53e-08 | 7 |
surface structure | 4.22e-08 | 99 |
bronchus | 1.25e-07 | 5 |
thoracic cavity element | 1.81e-07 | 34 |
thoracic cavity | 1.81e-07 | 34 |
urothelium | 2.78e-07 | 5 |
thoracic segment organ | 3.29e-07 | 35 |
head | 3.29e-07 | 56 |
subdivision of head | 3.38e-07 | 49 |