FFCP PHASE1:Hg19::chr13:100153651..100153664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9375 | |EntrezGene=9375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11865 | |HGNC=11865 | ||
|TSSclassifier=strong | |||
|UniProt=Q99805 | |UniProt=Q99805 | ||
|association_with_transcript=-6bp_to_ENST00000376387_5end | |association_with_transcript=-6bp_to_ENST00000376387_5end | ||
|cluster_id=chr13:100153651..100153664,+ | |||
|description=CAGE_peak_5_at_TM9SF2_5end | |description=CAGE_peak_5_at_TM9SF2_5end | ||
|id=chr13:100153651..100153664,+ | |id=chr13:100153651..100153664,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.76e-15!659;UBERON:0007023!1.05e-13!115;UBERON:0000922!8.72e-13!612;UBERON:0000480!1.37e-12!626;UBERON:0000467!1.79e-12!625;UBERON:0002050!2.82e-12!605;UBERON:0005423!2.82e-12!605;UBERON:0000923!3.77e-12!604;UBERON:0005291!3.77e-12!604;UBERON:0006598!3.77e-12!604;UBERON:0002532!3.77e-12!604;UBERON:0001049!5.71e-12!57;UBERON:0005068!5.71e-12!57;UBERON:0006241!5.71e-12!57;UBERON:0007135!5.71e-12!57;UBERON:0003080!3.16e-11!42;UBERON:0000062!4.45e-11!511;UBERON:0001017!9.58e-11!82;UBERON:0002780!9.73e-11!41;UBERON:0001890!9.73e-11!41;UBERON:0006240!9.73e-11!41;UBERON:0005743!2.11e-10!86;UBERON:0002616!1.31e-09!59;UBERON:0000955!4.61e-09!69;UBERON:0006238!4.61e-09!69;UBERON:0000073!1.39e-08!94;UBERON:0001016!1.39e-08!94;UBERON:0001893!2.66e-08!34;UBERON:0002791!5.55e-08!33;UBERON:0001869!6.83e-08!32;UBERON:0002020!7.02e-08!34;UBERON:0003528!7.02e-08!34;UBERON:0004111!4.33e-07!241;UBERON:0000475!5.50e-07!365;UBERON:0002619!7.63e-07!22;UBERON:0000025!8.74e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.43e-08;41!UBERON:0001890;1.43e-08;41!UBERON:0001869;4.50e-08;32!UBERON:0002791;9.34e-08;32!UBERON:0003528;9.80e-08;34!UBERON:0002020;9.80e-08;34!UBERON:0001893;9.81e-08;34!UBERON:0002619;1.99e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.99e-14,114;UBERON:0000922,1.45e-11,592;UBERON:0001049,1.64e-11,56;UBERON:0005068,1.64e-11,56;UBERON:0006241,1.64e-11,56;UBERON:0007135,1.64e-11,56;UBERON:0002050,5.09e-11,564;UBERON:0005423,5.80e-11,581;UBERON:0000923,5.90e-11,560;UBERON:0010316,5.90e-11,560;UBERON:0005291,5.90e-11,560;UBERON:0006598,5.90e-11,560;UBERON:0010317,5.90e-11,560;UBERON:0002532,5.90e-11,560;UBERON:0002780,9.62e-11,41;UBERON:0001890,9.62e-11,41;UBERON:0003080,9.62e-11,41;UBERON:0006240,9.62e-11,41;UBERON:0000073,1.01e-10,53;UBERON:0002616,1.01e-10,53;UBERON:0001017,2.39e-10,81;UBERON:0000955,1.13e-08,68;UBERON:0006238,1.13e-08,68;UBERON:0001016,1.80e-08,89;UBERON:0001893,2.63e-08,34;UBERON:0011216,3.00e-08,223;UBERON:0001869,6.77e-08,32;UBERON:0003528,6.96e-08,34;UBERON:0002020,6.96e-08,34;UBERON:0002791,1.23e-07,32;UBERON:0004111,6.11e-07,240;UBERON:0002619,7.58e-07,22 | |||
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| ||
|short_description=p5@TM9SF2 | |short_description=p5@TM9SF2 | ||
}} | }} |
Latest revision as of 07:15, 16 September 2015
Short description: | p5@TM9SF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TM9SF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000376387_5end |
EntrezGene: | TM9SF2 |
HGNC: | 11865 |
UniProt: | Q99805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.99e-14 | 114 |
embryo | 1.45e-11 | 592 |
neural tube | 1.64e-11 | 56 |
neural rod | 1.64e-11 | 56 |
future spinal cord | 1.64e-11 | 56 |
neural keel | 1.64e-11 | 56 |
embryonic structure | 5.09e-11 | 564 |
developing anatomical structure | 5.80e-11 | 581 |
germ layer | 5.90e-11 | 560 |
germ layer / neural crest | 5.90e-11 | 560 |
embryonic tissue | 5.90e-11 | 560 |
presumptive structure | 5.90e-11 | 560 |
germ layer / neural crest derived structure | 5.90e-11 | 560 |
epiblast (generic) | 5.90e-11 | 560 |
regional part of forebrain | 9.62e-11 | 41 |
forebrain | 9.62e-11 | 41 |
anterior neural tube | 9.62e-11 | 41 |
future forebrain | 9.62e-11 | 41 |
regional part of nervous system | 1.01e-10 | 53 |
regional part of brain | 1.01e-10 | 53 |
central nervous system | 2.39e-10 | 81 |
brain | 1.13e-08 | 68 |
future brain | 1.13e-08 | 68 |
nervous system | 1.80e-08 | 89 |
telencephalon | 2.63e-08 | 34 |
organ system subdivision | 3.00e-08 | 223 |
cerebral hemisphere | 6.77e-08 | 32 |
brain grey matter | 6.96e-08 | 34 |
gray matter | 6.96e-08 | 34 |
regional part of telencephalon | 1.23e-07 | 32 |
anatomical conduit | 6.11e-07 | 240 |
regional part of cerebral cortex | 7.58e-07 | 22 |