FFCP PHASE1:Mm9::chr4:129500571..129500592,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1621 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:129500571..129500592,- | |||
|description=CAGE_peak_at_chr4:129500571..129500592,- | |description=CAGE_peak_at_chr4:129500571..129500592,- | ||
|id=chr4:129500571..129500592,- | |id=chr4:129500571..129500592,- | ||
|ontology_enrichment_celltype=CL:0002563!1.94e-22!9;CL:0002251!1.94e-22!9;CL:0000063!5.71e-22!66;CL:0000066!3.69e-20!25;CL:0000223!2.12e-16!20;CL:0000239!1.45e-15!6;CL:0000677!1.45e-15!6;CL:0000212!1.45e-15!6;CL:0000584!1.45e-15!6;CL:0000144!2.25e-13!121;CL:0000012!2.25e-13!121;CL:0000075!3.14e-13!7;CL:0002076!9.94e-13!15;CL:0000548!6.83e-11!115;CL:0000004!6.83e-11!115;CL:0000255!6.83e-11!115;CL:0002371!1.88e-10!118;CL:0002320!1.40e-08!46;CL:0000134!1.40e-08!46;CL:0002250!1.91e-08!3;CL:0000473!3.00e-08!3;CL:0000627!3.00e-08!3;CL:0000682!3.00e-08!3;CL:0000219!7.62e-08!54;CL:0000838!8.06e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.56e-29,9;CL:0002251,3.56e-29,9;CL:0000066,7.56e-23,25;CL:0000223,1.19e-22,20;CL:0000239,6.62e-20,6;CL:0000677,6.62e-20,6;CL:0000584,6.62e-20,6;CL:0002076,1.81e-17,15;CL:0000075,4.06e-17,7;CL:0002250,8.12e-11,3;CL:0000213,2.89e-08,1;CL:0002078,2.89e-08,1;CL:0000115,2.89e-08,1;CL:0002262,2.89e-08,1;CL:1000398,2.89e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.94e-22!9;UBERON:0004808!1.94e-22!9;UBERON:0001277!1.94e-22!9;UBERON:0001242!3.70e-18!13;UBERON:0000060!3.70e-18!13;UBERON:0001262!3.70e-18!13;UBERON:0004786!3.70e-18!13;UBERON:0000485!5.03e-18!11;UBERON:0000344!1.88e-15!15;UBERON:0004923!7.14e-09!24;UBERON:0002384!1.40e-08!46;UBERON:0003929!2.64e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.56e-29,9;UBERON:0004808,3.56e-29,9;UBERON:0001277,3.56e-29,9;UBERON:0000485,7.35e-24,11;UBERON:0001242,3.56e-20,13;UBERON:0001262,3.56e-20,13;UBERON:0004786,3.56e-20,13;UBERON:0000344,1.81e-17,15;UBERON:0003929,1.47e-12,55;UBERON:0004923,7.57e-11,24;UBERON:0000490,2.57e-10,66;UBERON:0005911,7.91e-10,69;UBERON:0000160,2.43e-08,31;UBERON:0002394,2.89e-08,1;UBERON:0001281,2.89e-08,1;UBERON:0000353,2.89e-08,1;UBERON:0003497,2.89e-08,1;UBERON:0003909,2.89e-08,1;UBERON:0003928,2.89e-08,1;UBERON:0003835,2.89e-08,1;UBERON:0003513,2.89e-08,1;UBERON:0001280,2.89e-08,1;UBERON:0004647,2.89e-08,1;UBERON:0002294,2.89e-08,1;UBERON:0001173,2.89e-08,1;UBERON:0004912,2.89e-08,1;UBERON:0005171,2.89e-08,1 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,0.60492842261366,2.00358291978539,0.839396359559449,2.10251376535973,0.774739940649458,5.77233760821834,5.61754863172784,0,0.239316476986009,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,1.72269589234506,0.430761996159075,0.861884930743556,0,0,0.221730510655305,0,0,0,1.73310971850765,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.15945795480671,0,1.3599426674155,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.509935289981566,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,0.60492842261366,2.00358291978539,0.839396359559449,2.10251376535973,0.774739940649458,5.77233760821834,5.61754863172784,0,0.239316476986009,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,1.72269589234506,0.430761996159075,0.861884930743556,0,0,0.221730510655305,0,0,0,1.73310971850765,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.15945795480671,0,1.3599426674155,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.509935289981566,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:129500571..129500592,- | |short_description=p@chr4:129500571..129500592,- | ||
}} | }} |
Latest revision as of 19:53, 4 August 2015
Short description: | p@chr4:129500571..129500592, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129500571..129500592, - |
Coexpression cluster: | MCL_coexpression_mm9:1621 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.56e-29 | 9 |
epithelial cell of alimentary canal | 3.56e-29 | 9 |
epithelial cell | 7.56e-23 | 25 |
endodermal cell | 1.19e-22 | 20 |
brush border epithelial cell | 6.62e-20 | 6 |
gut absorptive cell | 6.62e-20 | 6 |
enterocyte | 6.62e-20 | 6 |
endo-epithelial cell | 1.81e-17 | 15 |
columnar/cuboidal epithelial cell | 4.06e-17 | 7 |
intestinal crypt stem cell | 8.12e-11 | 3 |
lining cell | 2.89e-08 | 1 |
meso-epithelial cell | 2.89e-08 | 1 |
endothelial cell | 2.89e-08 | 1 |
endothelial cell of sinusoid | 2.89e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.56e-29 | 9 |
gastrointestinal system epithelium | 3.56e-29 | 9 |
intestinal epithelium | 3.56e-29 | 9 |
simple columnar epithelium | 7.35e-24 | 11 |
intestinal mucosa | 3.56e-20 | 13 |
wall of intestine | 3.56e-20 | 13 |
gastrointestinal system mucosa | 3.56e-20 | 13 |
mucosa | 1.81e-17 | 15 |
gut epithelium | 1.47e-12 | 55 |
organ component layer | 7.57e-11 | 24 |
unilaminar epithelium | 2.57e-10 | 66 |
endo-epithelium | 7.91e-10 | 69 |
intestine | 2.43e-08 | 31 |
bile duct | 2.89e-08 | 1 |
hepatic sinusoid | 2.89e-08 | 1 |
parenchyma | 2.89e-08 | 1 |
abdomen blood vessel | 2.89e-08 | 1 |
sinusoid | 2.89e-08 | 1 |
digestive system duct | 2.89e-08 | 1 |
abdominal segment blood vessel | 2.89e-08 | 1 |
trunk blood vessel | 2.89e-08 | 1 |
liver parenchyma | 2.89e-08 | 1 |
liver lobule | 2.89e-08 | 1 |
biliary system | 2.89e-08 | 1 |
biliary tree | 2.89e-08 | 1 |
biliary bud | 2.89e-08 | 1 |
hepatic duct | 2.89e-08 | 1 |