FFCP PHASE1:Mm9::chr2:134611934..134611954,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18795 | |EntrezGene=18795 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3315 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENSMUST00000130524_5end | |association_with_transcript=23bp_to_ENSMUST00000130524_5end | ||
|cluster_id=chr2:134611934..134611954,+ | |||
|description=CAGE_peak_3_at_Plcb1_5end | |description=CAGE_peak_3_at_Plcb1_5end | ||
|id=chr2:134611934..134611954,+ | |id=chr2:134611934..134611954,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.55e-07!33;CL:0000047!2.55e-07!33;CL:0000031!2.55e-07!33;CL:0000404!2.55e-07!33 | |ontology_enrichment_celltype=CL:0000540!2.55e-07!33;CL:0000047!2.55e-07!33;CL:0000031!2.55e-07!33;CL:0000404!2.55e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.30e-07,33;CL:0000047,3.30e-07,33;CL:0000031,3.30e-07,33;CL:0000404,3.30e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-11!73;UBERON:0005743!1.01e-11!73;UBERON:0002346!2.19e-11!71;UBERON:0003075!2.19e-11!71;UBERON:0007284!2.19e-11!71;UBERON:0000073!4.14e-11!75;UBERON:0001016!4.14e-11!75;UBERON:0000025!1.32e-10!114;UBERON:0004121!1.54e-10!102;UBERON:0000924!1.54e-10!102;UBERON:0006601!1.54e-10!102;UBERON:0002020!4.16e-10!34;UBERON:0001049!1.78e-09!52;UBERON:0005068!1.78e-09!52;UBERON:0006241!1.78e-09!52;UBERON:0007135!1.78e-09!52;UBERON:0004111!7.70e-09!122;UBERON:0000955!1.93e-08!50;UBERON:0006238!1.93e-08!50;UBERON:0002791!3.54e-08!29;UBERON:0003528!3.54e-08!29;UBERON:0001893!3.54e-08!29;UBERON:0005177!3.69e-08!85;UBERON:0005157!4.03e-08!27;UBERON:0002616!6.42e-08!49;UBERON:0002021!9.50e-08!10;UBERON:0000411!9.50e-08!10;UBERON:0001950!9.50e-08!10;UBERON:0000956!2.17e-07!21;UBERON:0001869!2.17e-07!21;UBERON:0000203!2.17e-07!21;UBERON:0000468!3.53e-07!333;UBERON:0003080!7.09e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.24e-11,73;UBERON:0001016,2.08e-10,75;UBERON:0002020,4.88e-10,34;UBERON:0000073,4.01e-09,54;UBERON:0000025,4.14e-09,114;UBERON:0001049,6.91e-09,52;UBERON:0005068,6.91e-09,52;UBERON:0006241,6.91e-09,52;UBERON:0007135,6.91e-09,52;UBERON:0002346,3.35e-08,64;UBERON:0003075,3.35e-08,64;UBERON:0007284,3.35e-08,64;UBERON:0002021,4.68e-08,10;UBERON:0000411,4.68e-08,10;UBERON:0001950,4.68e-08,10;UBERON:0003528,4.87e-08,29;UBERON:0002791,4.87e-08,29;UBERON:0001893,4.87e-08,29;UBERON:0010314,1.18e-07,92;UBERON:0000955,3.21e-07,47;UBERON:0006238,3.21e-07,47;UBERON:0004121,3.51e-07,95;UBERON:0000924,3.51e-07,95;UBERON:0006601,3.51e-07,95;UBERON:0000956,3.59e-07,21;UBERON:0001869,3.59e-07,21;UBERON:0000203,3.59e-07,21;UBERON:0004111,4.92e-07,122 | |||
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| ||
|short_description=p3@Plcb1 | |short_description=p3@Plcb1 | ||
}} | }} |
Latest revision as of 19:10, 25 September 2015
Short description: | p3@Plcb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Plcb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3315 |
Association with transcript: | 23bp_to_ENSMUST00000130524_5end |
EntrezGene: | Plcb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.30e-07 | 33 |
neuronal stem cell | 3.30e-07 | 33 |
neuroblast | 3.30e-07 | 33 |
electrically signaling cell | 3.30e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.24e-11 | 73 |
nervous system | 2.08e-10 | 75 |
gray matter | 4.88e-10 | 34 |
regional part of nervous system | 4.01e-09 | 54 |
tube | 4.14e-09 | 114 |
neural tube | 6.91e-09 | 52 |
neural rod | 6.91e-09 | 52 |
future spinal cord | 6.91e-09 | 52 |
neural keel | 6.91e-09 | 52 |
neurectoderm | 3.35e-08 | 64 |
neural plate | 3.35e-08 | 64 |
presumptive neural plate | 3.35e-08 | 64 |
occipital lobe | 4.68e-08 | 10 |
visual cortex | 4.68e-08 | 10 |
neocortex | 4.68e-08 | 10 |
brain grey matter | 4.87e-08 | 29 |
regional part of telencephalon | 4.87e-08 | 29 |
telencephalon | 4.87e-08 | 29 |
structure with developmental contribution from neural crest | 1.18e-07 | 92 |
brain | 3.21e-07 | 47 |
future brain | 3.21e-07 | 47 |
ectoderm-derived structure | 3.51e-07 | 95 |
ectoderm | 3.51e-07 | 95 |
presumptive ectoderm | 3.51e-07 | 95 |
cerebral cortex | 3.59e-07 | 21 |
cerebral hemisphere | 3.59e-07 | 21 |
pallium | 3.59e-07 | 21 |
anatomical conduit | 4.92e-07 | 122 |