FFCP PHASE1:Mm9::chr5:135442713..135442733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135442713..135442733,+ | |||
|description=CAGE_peak_at_chr5:135442713..135442733,+ | |description=CAGE_peak_at_chr5:135442713..135442733,+ | ||
|id=chr5:135442713..135442733,+ | |id=chr5:135442713..135442733,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.70e-20!9;CL:0002251!1.70e-20!9;CL:0000066!2.41e-20!25;CL:0002076!3.44e-20!15;CL:0000223!5.13e-17!20;CL:0000239!3.68e-14!6;CL:0000677!3.68e-14!6;CL:0000212!3.68e-14!6;CL:0000584!3.68e-14!6;CL:0000075!5.30e-12!7;CL:0002250!6.58e-08!3;CL:0000473!1.26e-07!3;CL:0000627!1.26e-07!3;CL:0000682!1.26e-07!3;CL:0000068!4.89e-07!3;CL:0002202!4.89e-07!3;CL:0000069!4.89e-07!3;CL:0002632!4.89e-07!3;CL:0002368!4.89e-07!3;CL:0000307!4.89e-07!3;CL:0000377!4.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.55e-53,9;CL:0002251,2.55e-53,9;CL:0000066,7.09e-45,25;CL:0002076,9.42e-39,15;CL:0000239,6.52e-36,6;CL:0000677,6.52e-36,6;CL:0000584,6.52e-36,6;CL:0000223,9.26e-35,20;CL:0000075,9.28e-31,7;CL:0002250,7.84e-19,3;CL:0000682,4.59e-18,3;CL:0002321,5.38e-09,70;CL:0000473,4.55e-08,7;CL:0000213,5.53e-07,1;CL:0002078,5.53e-07,1;CL:0000115,5.53e-07,1;CL:0002262,5.53e-07,1;CL:1000398,5.53e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.95e-27!15;UBERON:0001242!1.23e-23!13;UBERON:0000060!1.23e-23!13;UBERON:0001262!1.23e-23!13;UBERON:0004786!1.23e-23!13;UBERON:0003350!1.70e-20!9;UBERON:0004808!1.70e-20!9;UBERON:0001277!1.70e-20!9;UBERON:0004923!7.05e-18!24;UBERON:0000485!2.18e-16!11;UBERON:0000160!5.11e-14!43;UBERON:0005409!5.22e-10!59;UBERON:0001007!9.77e-09!128;UBERON:0001555!9.77e-09!128;UBERON:0007026!9.77e-09!128;UBERON:0004119!1.73e-08!130;UBERON:0000925!1.73e-08!130;UBERON:0006595!1.73e-08!130;UBERON:0004921!2.22e-07!126;UBERON:0004185!2.22e-07!126;UBERON:0003126!4.89e-07!3;UBERON:0001005!4.89e-07!3;UBERON:0007196!4.89e-07!3;UBERON:0001558!4.89e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.55e-53,9;UBERON:0004808,2.55e-53,9;UBERON:0001277,2.55e-53,9;UBERON:0000485,1.74e-43,11;UBERON:0001242,1.14e-36,13;UBERON:0001262,1.14e-36,13;UBERON:0004786,1.14e-36,13;UBERON:0000344,1.14e-31,15;UBERON:0004923,1.87e-19,24;UBERON:0000160,3.20e-18,31;UBERON:0005409,1.29e-11,47;UBERON:0003929,9.08e-10,55;UBERON:0000490,6.28e-08,66;UBERON:0005911,1.58e-07,69;UBERON:0002394,5.53e-07,1;UBERON:0001281,5.53e-07,1;UBERON:0000353,5.53e-07,1;UBERON:0003497,5.53e-07,1;UBERON:0003909,5.53e-07,1;UBERON:0003928,5.53e-07,1;UBERON:0003835,5.53e-07,1;UBERON:0003513,5.53e-07,1;UBERON:0001280,5.53e-07,1;UBERON:0004647,5.53e-07,1;UBERON:0002294,5.53e-07,1;UBERON:0001173,5.53e-07,1;UBERON:0004912,5.53e-07,1;UBERON:0005171,5.53e-07,1;UBERON:0001153,7.23e-07,1;UBERON:0001045,7.23e-07,1 | |||
|phase1_expression=0,5.58360652222978,8.18998630901165,6.95667686005709,8.5152274090879,3.18970616632591,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,3.44539178469012,2.15380998079537,4.09395342103189,0,0.504060259519861,0.665191531965914,0,0,0,7.79899373328441,3.65716219788683,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,8.18998630901165,6.95667686005709,8.5152274090879,3.18970616632591,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.91763712426868,3.44539178469012,2.15380998079537,4.09395342103189,0,0.504060259519861,0.665191531965914,0,0,0,7.79899373328441,3.65716219788683,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:135442713..135442733,+ | |short_description=p@chr5:135442713..135442733,+ | ||
}} | }} |
Latest revision as of 09:59, 6 August 2015
Short description: | p@chr5:135442713..135442733, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135442713..135442733, + |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.55e-53 | 9 |
epithelial cell of alimentary canal | 2.55e-53 | 9 |
epithelial cell | 7.09e-45 | 25 |
endo-epithelial cell | 9.42e-39 | 15 |
brush border epithelial cell | 6.52e-36 | 6 |
gut absorptive cell | 6.52e-36 | 6 |
enterocyte | 6.52e-36 | 6 |
endodermal cell | 9.26e-35 | 20 |
columnar/cuboidal epithelial cell | 9.28e-31 | 7 |
intestinal crypt stem cell | 7.84e-19 | 3 |
M cell of gut | 4.59e-18 | 3 |
embryonic cell | 5.38e-09 | 70 |
defensive cell | 4.55e-08 | 7 |
lining cell | 5.53e-07 | 1 |
meso-epithelial cell | 5.53e-07 | 1 |
endothelial cell | 5.53e-07 | 1 |
endothelial cell of sinusoid | 5.53e-07 | 1 |
endothelial cell of hepatic sinusoid | 5.53e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.55e-53 | 9 |
gastrointestinal system epithelium | 2.55e-53 | 9 |
intestinal epithelium | 2.55e-53 | 9 |
simple columnar epithelium | 1.74e-43 | 11 |
intestinal mucosa | 1.14e-36 | 13 |
wall of intestine | 1.14e-36 | 13 |
gastrointestinal system mucosa | 1.14e-36 | 13 |
mucosa | 1.14e-31 | 15 |
organ component layer | 1.87e-19 | 24 |
intestine | 3.20e-18 | 31 |
gastrointestinal system | 1.29e-11 | 47 |
gut epithelium | 9.08e-10 | 55 |
unilaminar epithelium | 6.28e-08 | 66 |
endo-epithelium | 1.58e-07 | 69 |
bile duct | 5.53e-07 | 1 |
hepatic sinusoid | 5.53e-07 | 1 |
parenchyma | 5.53e-07 | 1 |
abdomen blood vessel | 5.53e-07 | 1 |
sinusoid | 5.53e-07 | 1 |
digestive system duct | 5.53e-07 | 1 |
abdominal segment blood vessel | 5.53e-07 | 1 |
trunk blood vessel | 5.53e-07 | 1 |
liver parenchyma | 5.53e-07 | 1 |
liver lobule | 5.53e-07 | 1 |
biliary system | 5.53e-07 | 1 |
biliary tree | 5.53e-07 | 1 |
biliary bud | 5.53e-07 | 1 |
hepatic duct | 5.53e-07 | 1 |
caecum | 7.23e-07 | 1 |
midgut | 7.23e-07 | 1 |