FFCP PHASE1:Mm9::chr12:33504922..33504941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:33504922..33504941,- | |||
|description=CAGE_peak_at_chr12:33504922..33504941,- | |description=CAGE_peak_at_chr12:33504922..33504941,- | ||
|id=chr12:33504922..33504941,- | |id=chr12:33504922..33504941,- | ||
|ontology_enrichment_celltype=CL:0000034!1.36e-09!97;CL:0000723!2.12e-08!91;CL:0000048!2.12e-08!91;CL:0000144!2.19e-07!121;CL:0000012!2.19e-07!121 | |ontology_enrichment_celltype=CL:0000034!1.36e-09!97;CL:0000723!2.12e-08!91;CL:0000048!2.12e-08!91;CL:0000144!2.19e-07!121;CL:0000012!2.19e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.09e-09,1;CL:0000792,2.09e-09,1;CL:0000213,3.65e-09,1;CL:0002078,3.65e-09,1;CL:0000115,3.65e-09,1;CL:0002262,3.65e-09,1;CL:1000398,3.65e-09,1;CL:0000945,6.33e-09,1;CL:0000236,6.33e-09,1;CL:0000826,6.33e-09,1;CL:0000355,8.73e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.47e-25,3;DOID:4045,4.47e-25,3;DOID:0050686,8.22e-22,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.65e-09,1;UBERON:0001281,3.65e-09,1;UBERON:0000353,3.65e-09,1;UBERON:0003497,3.65e-09,1;UBERON:0003909,3.65e-09,1;UBERON:0003928,3.65e-09,1;UBERON:0003835,3.65e-09,1;UBERON:0003513,3.65e-09,1;UBERON:0001280,3.65e-09,1;UBERON:0004647,3.65e-09,1;UBERON:0002294,3.65e-09,1;UBERON:0001173,3.65e-09,1;UBERON:0004912,3.65e-09,1;UBERON:0005171,3.65e-09,1;UBERON:0001134,8.73e-09,9;UBERON:0002036,8.73e-09,9;UBERON:0002385,8.73e-09,9;UBERON:0000486,8.73e-09,9;UBERON:0007503,8.73e-09,9;UBERON:0001015,8.73e-09,9;UBERON:0002329,8.73e-09,9;UBERON:0003082,8.73e-09,9;UBERON:0003059,8.73e-09,9;UBERON:0007282,8.73e-09,9;UBERON:0004290,8.73e-09,9;UBERON:0009618,8.73e-09,9;UBERON:0000383,5.83e-08,10;UBERON:0007524,2.77e-07,11;UBERON:0003077,2.77e-07,11;UBERON:0007285,2.77e-07,11 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.16787927191189,0,1.80772652818207,0.140788722151667,0.234064526321993,0.171217968225505,0,0.684802919724823,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,1.27006134691926,0,0,0,0,0.612508068787107,4.18531630736908,3.1253413780952,1.57057123192139,17.0587131528994,4.09827290975067,0.971020706062307,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,1.00669563634642,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.274462930807229,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,1.19980546198682,0.635351135365324,0,0,0.376963056338593,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.679913719975421,0.279902904647316,0.552799895217695,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0.233753804363138,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.16787927191189,0,1.80772652818207,0.140788722151667,0.234064526321993,0.171217968225505,0,0.684802919724823,0.524522414513984,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,1.27006134691926,0,0,0,0,0.612508068787107,4.18531630736908,3.1253413780952,1.57057123192139,17.0587131528994,4.09827290975067,0.971020706062307,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,1.00669563634642,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.274462930807229,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,1.44932244350839,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,0,1.19980546198682,0.635351135365324,0,0,0.376963056338593,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0,0,0.178368817602071,0,0.913394847343798,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.679913719975421,0.279902904647316,0.552799895217695,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0.233753804363138,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.972426868273176,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr12:33504922..33504941,- | |short_description=p@chr12:33504922..33504941,- | ||
}} | }} |
Latest revision as of 23:45, 4 August 2015
Short description: | p@chr12:33504922..33504941, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:33504922..33504941, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.09e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.09e-09 | 1 |
lining cell | 3.65e-09 | 1 |
meso-epithelial cell | 3.65e-09 | 1 |
endothelial cell | 3.65e-09 | 1 |
endothelial cell of sinusoid | 3.65e-09 | 1 |
endothelial cell of hepatic sinusoid | 3.65e-09 | 1 |
lymphocyte of B lineage | 6.33e-09 | 1 |
B cell | 6.33e-09 | 1 |
pro-B cell | 6.33e-09 | 1 |
multi-potent skeletal muscle stem cell | 8.73e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.65e-09 | 1 |
hepatic sinusoid | 3.65e-09 | 1 |
parenchyma | 3.65e-09 | 1 |
abdomen blood vessel | 3.65e-09 | 1 |
sinusoid | 3.65e-09 | 1 |
digestive system duct | 3.65e-09 | 1 |
abdominal segment blood vessel | 3.65e-09 | 1 |
trunk blood vessel | 3.65e-09 | 1 |
liver parenchyma | 3.65e-09 | 1 |
liver lobule | 3.65e-09 | 1 |
biliary system | 3.65e-09 | 1 |
biliary tree | 3.65e-09 | 1 |
biliary bud | 3.65e-09 | 1 |
hepatic duct | 3.65e-09 | 1 |
skeletal muscle tissue | 8.73e-09 | 9 |
striated muscle tissue | 8.73e-09 | 9 |
muscle tissue | 8.73e-09 | 9 |
multilaminar epithelium | 8.73e-09 | 9 |
epithelial vesicle | 8.73e-09 | 9 |
musculature | 8.73e-09 | 9 |
somite | 8.73e-09 | 9 |
myotome | 8.73e-09 | 9 |
presomitic mesoderm | 8.73e-09 | 9 |
presumptive segmental plate | 8.73e-09 | 9 |
dermomyotome | 8.73e-09 | 9 |
trunk paraxial mesoderm | 8.73e-09 | 9 |
musculature of body | 5.83e-08 | 10 |
dense mesenchyme tissue | 2.77e-07 | 11 |
paraxial mesoderm | 2.77e-07 | 11 |
presumptive paraxial mesoderm | 2.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.47e-25 | 3 |
muscle cancer | 4.47e-25 | 3 |
organ system cancer | 8.22e-22 | 6 |